Spo14273 (gene)

Overview
NameSpo14273
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00911 : 217933 .. 219720 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAAAGAAGAGCAAGGCAAGAGTGGCGTAAATTTAATTTTGTTGAAACTGGGCCCACGAGTCACTCAAATACTTCAACCAGCCATCATCAGTGACAGAAAACGAGGGTGTAAAACTGTAAATACAACAAAAACAGGGGGCATTATATTATCCAAACAACTGACGGGATTATAAAAGTCGTGGGCTGAACCAAGTTATCAACTTCCCCCAAATATCTTGCTCGAGTCAAATCTTTACTACTTCCTTCCGTCTTTTTCTCTCTCCTAACTCTCTCTTCTTCACCTGCAATTTTCCCCAAATATACCTCAGATTTTCAGCTTCATTTCATTCTAAAAGGTATGTACTTTTACTCATCCATCTGCTCAAATCTCTGTTTCCTTAATTTCCCACTTTCCTAAATTCAATTTATGTTATTCTTTGATTTCTTCTCATTTTGTTTAATTTTCTGTGTGACGAATTAGTAAATTCAATTGTGTTTTCTTTCTTTGTTTTCATGATTGGTGGTTGTTAATTTGTTTGAATTTTACTTCTTAAAATGTTGAACTTGAATTTGTTGCTTAATTTGGAATTTTCTTTTTTGTTGTGATTTGGATTTTTGGATTTGGATTTTGGTCTGGGTTAATGATGAGTTGAGAGGGTGTTTAAGTTGGAAATTCTTGAAAACAATCCAGGAATTCGGATTAGTTGATGATTAGCTTGATGAATCTTGGGTTATATAATAAATAAATAAACATTAATTTGGGTTTCATTATTGATTGATGTTGGGTGCATCAACTTTGATGTGATTTTGGGTGTTTAGTTAATTAAGGATGGCTTTTATGCTACTCTGCTAGGGTATCAAAGGTTTCTTTTGGGGGGTTAAAGTGGCTTTTCACCTTTAACCCATGCCTTTCCAGTAGTTTCCACGCCCTTCATTTCGTAGATTTACACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTTTTGTAGTTACTAATTGTGGTATAACCTTTAACTTAGGGATCGGTATGTAATTATTAAATTATATATTCAGCAACAAAAGAAAAGCAAATTAAGATTGTGAATAATTAGTTGTATTTGATCTTGGTGATAAGAGCGAATTATGGGGCTTACAAGTACCAAGTAAATTGATGAAATACAAAAAAAAGGTTCGGTTGAGTAGAGTGGGAAACAAACTCTTACCATAGCTGCCAGATTTATGGATCATGATGGTAATATTACAGTCTTTGTTAAGGTTTATCGTATTAATCGGGGTTAATTTATGGAACTGTGATCTTTGTTATAGAAAAGATTAGATCATGAATTCATTGCGGATTTCCTTTTCGAGTTGGATATTTGATTTACTAAAGAGCTGTTTTTTTCCGTGACTTTTCATTCTTTTAGGCTGTTTAATTGCCTGCATTTACATCAGGATGTGGATTTGCTTTCTATCAATCTGATAGATGTTGCAATCGTTACTGGAATAATCTTTGATGCTTATTGCGTGTATGTTAGTTTACTAGAACAATCATTATTGGTGCTGTTTCTTGTGGGAATTTGTTAGCTTTCTACATGGTAATGAATGATATGATGTTAATCAAGCTTATTAATTTAGAATCTTTTTGACTTGTGAATTCTTACATTGTTTCTTTGAAATTTTGCAGGTAAACCATTTGTCTTCTGCTTTAGCAGTGTGTAAGAACCAGCACATCATATTCTCTCTGAAGTTGTTGTTTTGA

mRNA sequence

ATGACGAAAGAAGAGCAAGGCAAGAGTGGCGTAAATTTAATTTTGTTGAAACTGGGCCCACGAGTCACTCAAATACTTCAACCAGCCATCATCAGTGACAGAAAACGAGGGTGTAAAACTTTACTAATTGTGGTAAACCATTTGTCTTCTGCTTTAGCAGTGTGTAAGAACCAGCACATCATATTCTCTCTGAAGTTGTTGTTTTGA

Coding sequence (CDS)

ATGACGAAAGAAGAGCAAGGCAAGAGTGGCGTAAATTTAATTTTGTTGAAACTGGGCCCACGAGTCACTCAAATACTTCAACCAGCCATCATCAGTGACAGAAAACGAGGGTGTAAAACTTTACTAATTGTGGTAAACCATTTGTCTTCTGCTTTAGCAGTGTGTAAGAACCAGCACATCATATTCTCTCTGAAGTTGTTGTTTTGA

Protein sequence

MTKEEQGKSGVNLILLKLGPRVTQILQPAIISDRKRGCKTLLIVVNHLSSALAVCKNQHIIFSLKLLF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14273.1Spo14273.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo14273.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14273.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14273.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14273.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006281 DNA repair
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
biological_process GO:0006474 N-terminal protein amino acid acetylation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0042908 xenobiotic transport
biological_process GO:0007165 signal transduction
biological_process GO:0009651 response to salt stress
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0030007 cellular potassium ion homeostasis
biological_process GO:0043090 amino acid import
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006768 biotin metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0071554 cell wall organization or biogenesis
biological_process GO:0006457 protein folding
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0045492 xylan biosynthetic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010413 glucuronoxylan metabolic process
biological_process GO:0042542 response to hydrogen peroxide
cellular_component GO:0031248 protein acetyltransferase complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0000151 ubiquitin ligase complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0034450 ubiquitin-ubiquitin ligase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo237450.73Barchart | Table
Spo216000.72Barchart | Table
Spo172200.71Barchart | Table
Spo152220.71Barchart | Table
Spo038650.70Barchart | Table
Spo056210.70Barchart | Table
Spo123640.70Barchart | Table
Spo013440.70Barchart | Table
Spo131610.70Barchart | Table
Spo142400.69Barchart | Table
Spo209120.69Barchart | Table
Spo101950.69Barchart | Table
Spo005260.69Barchart | Table
Spo259450.68Barchart | Table
Spo177260.68Barchart | Table
Spo076850.68Barchart | Table
Spo255730.68Barchart | Table
Spo056270.68Barchart | Table
Spo020900.68Barchart | Table
Spo034160.68Barchart | Table
Spo218230.68Barchart | Table
Spo264810.67Barchart | Table
Spo109650.67Barchart | Table
Spo242870.67Barchart | Table
Spo074410.67Barchart | Table
Spo125430.67Barchart | Table
Spo172090.67Barchart | Table
Spo226940.67Barchart | Table
Spo161860.67Barchart | Table
Spo103290.67Barchart | Table
Spo108350.66Barchart | Table
Spo006530.66Barchart | Table
Spo011870.66Barchart | Table
Spo016280.66Barchart | Table
Spo018410.66Barchart | Table
Spo026650.66Barchart | Table
Spo083760.66Barchart | Table
Spo001460.66Barchart | Table
Spo111600.66Barchart | Table
Spo116680.66Barchart | Table
Spo124230.66Barchart | Table
Spo130870.66Barchart | Table
Spo149530.66Barchart | Table
Spo201390.66Barchart | Table
Spo209300.66Barchart | Table
Spo259870.66Barchart | Table
Spo218330.65Barchart | Table
Spo220860.65Barchart | Table
Spo170240.65Barchart | Table
Spo162180.65Barchart | Table
Spo144520.65Barchart | Table
Spo247360.65Barchart | Table
Spo087130.65Barchart | Table
Spo070790.65Barchart | Table
Spo065740.65Barchart | Table
Spo214220.65Barchart | Table