Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAGTAATTAAAATATAGGAGTATATATGTTGGTAAGAGGGTCATTCCTTCCACTTTGGAAAATAAGGAGAGGTAGCCAAAGCAAAATAAAAATGGGGACATCATGGGAACAACGTTTGCCTGCAATAGCAATGGTGTCTATGCAAGTGTTGTACGCAGCAATGGCTCTCTTGAATAGGGCTGCCCTTGTTAAGGGCATGAGTCCTAGAGTCTTCATTTTCTATCGACAAACTATTGCTACTTTGGTTATTTCTCCCATCGCTTATTTCACAAGGTACTAGCTAAGATCTATCTATCTATCTATCCATCCATGCTTCAAATTTCAAGTAATTCATTCATTTATTCATATCATGTTTAATATGCAGGAGACGATCTAATACTACTACGCCGAGTATAGGATTTAAGAGCTTTGTTTTGATCTTCATCACAGCCTTCATTGGGTAATTTAAGTCAAATAACATAATTTAAGTGATTTAGAAAATCAAAATATGATATGCTAGCTTTGACATCTTTTTGATTAATTAGTTTACAAATGATTTTGATGATGTGAAAAAACAGGGTGACTCTCAATCAGAACATGTACTTTGAAGGATTGTACTTGGCTTCTTCATCAATTGCAAGTGCAACATACAACCTTATCCCTGCTGTCACTTTCATGACTGCTGCCGCCTTCGGGTAAGATACATACTACAAAAATACTTCCTCCATTCTTGAAACTTAATCCGTTTTGACAAGTGGGTTTAATTGAGTTAAGTTTTATCAAAAGGTCTTGTGCGCACAAGGTGTACAATAAATTTATTGTACACCAAGATAACTTTTATTCAATTTTTTATAACTTTAACCTACTTTTGGTTAACTTTAATATTAGTAAAAAAAAGTTGATGGATAAACATTTTAAAGGGTTAAATGATTAATTTTATACATTATTATTGATTTTGAAGAAATAAATTTTATTAAAATGAAATTTTTTATCACTAAAAGTATATAATTTTTACATATATAAGCTTAACTTTTAAGTAGTTTGAGTTAATTTTTACTCCGGTGTACAATATTTATTGTACACCCATTGTAAATAAGAATTTGTGAAGTCTTATTCCCTCCATTTTTTTTTTCCTGTTTCTATAGATGTCGTTCCTATTTGATATTATTGTTTCTATTTTTGGACATGATTTTTTACCATAAATTTCTCCATCGTCTCTTATTTAAATTCACATTTTCCCATTCACCCTTCCAACACCACTTTTATGAATTTTATTACTTTAATTAAAATATCTTCTCTTTTTCATTTCTTTACTACTTTCCTTCATTTCTTCATTACTTTCTCTTACACCCAATCATTACAAGATTCAATTTATTTATTTTTCACCCTAAACTCCAAATAGGTACATCAAAGGAATGGAGGGAGTACTTAGTAGTAAACAAATAAGTTATTATTGGAGATAAATATTGGACAAATAATGAAAGATTTAAAAAAAAAAAAAATCAATACGAAAAGAGCACTAACATTAANTAATGAAAGATTTAAAAAAAAAAAAAATCAATACGAAAAGAGCACTAACATTAAAAAAAAACGGAGAAGAAAATGATGGCCATTTTGTTAGATGATTCACAACCATCATAGATTGAAGATCTCATAAGAAGAGAACGAACCTTAATTACCTTATCAAAATACAACTAAAACATTCCTTACCAAAGTTGTAAGAAAAGAGATGATCCATTCCTTATCAAAATTGATATTTTAAGGTGTCTAGTCTTTTTATCTAGCCATAAATTCAAACAAGCTCAGATCATATAAGTTTTATTAGGAGATCTCGGGTGAAAAGAATGAAACTTCGTTATAGTTTGGTTATTTTGATATTCACCACTTTAAAAGTTTCAAGTTTTTTTATTTACCATTCCACCTTTTATAAAATGTAATTTTATGTTCACCAACTATTAACTAAGTTTGTCCAAACTTCCGTCTAACTTTTTGATTGAAAACTTAAAGAAAAAGGGGGGGAAATTAAAGAAGTTGGTTAAGCGTAAGTTTGTAACCCATATGGACATCGATTTTCATTGTTCTGTTGTTCCAAACTTCCAATAGCATAAGGAATGGCATGATGTAGGTACTTAATTTTGCCAAGTGAGTTCTTAAATTGATAGACTTGACTTAAACAAATTGAATAGGTTGGAGCAAGTGAATGCAAAGACATTAAGCAGTGCAGCAAAGATATTAGGGACAACCTTTTGCGTTGCAGGAGCAGTTTCTATGACATTGTTGAGAGGTCCGAAGCTACTTAACTCGCAACTTCCATCATCCAACTCTGCATTTCTGCACTTGTTTGCGGTTGACCAAACCTGGTTCCTAGGTTGTGTATGTCTCCTTGCAAGTAGTTGTTGCTGGTCCTTGTGGCTCATTTTACAGGTATGTTTTCTACTTCCAAGGCTCTCTTATGTTCTGTTCTGTGGCTCAAAATCCGAAAATGGCTATGTAAATCTGGGCCGAATATTTGATTTGATGTGATGTGTTGAAGAATATTCTATTAGAAGCAAAATTCGCCCTGACTATGGTTCAATCGGATATAGGAGTTAATCCCCCAAGATTGACCCAAATCGGATATAGGAGTTAATCCCCCAAGTGTACTCAAATAAGACGAACTAGAAACTTTAAACATTTTCAGAACAATGGTTATGGAAAACAGAACAGAGGAAGAAAAAGAAGAATATTGTGTATTTTCAACAAAACCCCAAGCTTCTCATTTAAAATGTCAAGGGAAATCGTAACCCAAAAAGGCACACCGCGAACACATATCAGAAACACGACCCGAACCGGCCGTACGTGGGGATGCCCTTTCTAGTCCGAACTAGTAGAGGAAGTACTTCAAAGTATAAATGTCATACAAGTACCAAATTTAAACAAGGAAAGACCTTTTTTTTTTTTACCAATGTGTGATAAAGTTATTCCCTCAAAATAGTAGTACCAAAAAACAGATTTTCCTCCACTTTTGCATTGTTTCCGCTGTCTTTAGCTTATTTTGTCACTAAACTTATAATAACTGAACAGGTCCCAGTTACAGCTTGTTACCCTGACCACCTATCTCTCTCAGCATGGATGTGTTTCGTATCAATGCTGCAAACTGGTGCAGTTGCCTTGTTCTTAGAACCTGATCCTGTTGCTTGGAATTTAAGTTCGGGCCTTGAACTCACCTGTTGCTTTTTCTCGGTAAGTATATTCTTTCATGACGATAAATAGACCATTACATCTGTTCCTGAATACTTGCTATAGTTTGACTTTTGCACTATTCATACATTAATTTTGACCAAATTTCTTTGGCAAGTGTGTTAGTCAAATTGTTGCAAGTATTAAAGAACAGAAAGATTATACTCCACATAATTTCTAATGTAACCAAAAATATCAATGTTTCAATCTGTAGGGAATTGTAGGATCTGGGGTACAGTTCTTTGTTCAATCCTGGTGTATATCGCGTAAAGGTCCATTTTACTCTGCTATGTTTACTCCTCTAGCCACTGTCATAACCACTGTTCTAGCCTGCATTTTTCTCCATGAAGAGCTTTATCTTGGCAGGTAATTCACATACGGAGTATGATTCTTTGACGTATACTTCCTCTGTTTTTCAATATTTGTGACTTTATTAACATGGTTTTTATCATCATTTCTTTTCAGTTTACTAGGTGCTACCACAGTCATCATCGGCTTATATGTCGTATTGTGGGGTAAATCCGAAGAGGTTAAGGAAAAACTGCATCTTACATCAGGAGCTTGTCCAGTAAAAATAGACCAAGAAAAGAAAAGTGAGAAAATTGATTTGGAACAACCACTTTTGACAAATGATAGTATTACTCCTAATTAGGGTAAAGTTCAGTTGCTTGTAGAATTGTATCAACGCGCTAATTTTGTGATTTAAGCTGTATGTAACGGATTATGAAATATAGGCCCTTTTTGTGTATGGTTATGGAACGGACCTAGAAGGCTCAAATTTTTACCACTAGACCAAAAATAGCTTTGTACCACCGGCTACAAGTACGGCCGTAGGGTTGTACACCGGTCCACAACCGGACCAGACTGGACCGTAACCATAAACTAGGAAATTTGTGGTCCGAAAAATTTCTAGTCCAGTCTAGGTTTAGACCGAATTAGACCTAAATTATTGAATATGCC CTAGTAATTAAAATATAGGAGTATATATGTTGGTAAGAGGGTCATTCCTTCCACTTTGGAAAATAAGGAGAGGTAGCCAAAGCAAAATAAAAATGGGGACATCATGGGAACAACGTTTGCCTGCAATAGCAATGGTGTCTATGCAAGTGTTGTACGCAGCAATGGCTCTCTTGAATAGGGCTGCCCTTGTTAAGGGCATGAGTCCTAGAGTCTTCATTTTCTATCGACAAACTATTGCTACTTTGGTTATTTCTCCCATCGCTTATTTCACAAGGAGACGATCTAATACTACTACGCCGAGTATAGGATTTAAGAGCTTTGTTTTGATCTTCATCACAGCCTTCATTGGGGTGACTCTCAATCAGAACATGTACTTTGAAGGATTGTACTTGGCTTCTTCATCAATTGCAAGTGCAACATACAACCTTATCCCTGCTGTCACTTTCATGACTGCTGCCGCCTTCGGGTTGGAGCAAGTGAATGCAAAGACATTAAGCAGTGCAGCAAAGATATTAGGGACAACCTTTTGCGTTGCAGGAGCAGTTTCTATGACATTGTTGAGAGGTCCGAAGCTACTTAACTCGCAACTTCCATCATCCAACTCTGCATTTCTGCACTTGTTTGCGGTTGACCAAACCTGGTTCCTAGGTTGTGTATGTCTCCTTGCAAGTAGTTGTTGCTGGTCCTTGTGGCTCATTTTACAGGTCCCAGTTACAGCTTGTTACCCTGACCACCTATCTCTCTCAGCATGGATGTGTTTCGTATCAATGCTGCAAACTGGTGCAGTTGCCTTGTTCTTAGAACCTGATCCTGTTGCTTGGAATTTAAGTTCGGGCCTTGAACTCACCTGTTGCTTTTTCTCGGGAATTGTAGGATCTGGGGTACAGTTCTTTGTTCAATCCTGGTGTATATCGCGTAAAGGTCCATTTTACTCTGCTATGTTTACTCCTCTAGCCACTGTCATAACCACTGTTCTAGCCTGCATTTTTCTCCATGAAGAGCTTTATCTTGGCAGTTTACTAGGTGCTACCACAGTCATCATCGGCTTATATGTCGTATTGTGGGGTAAATCCGAAGAGGTTAAGGAAAAACTGCATCTTACATCAGGAGCTTGTCCAGTAAAAATAGACCAAGAAAAGAAAAGTGAGAAAATTGATTTGGAACAACCACTTTTGACAAATGATAGTATTACTCCTAATTAGGGTAAAGTTCAGTTGCTTGTAGAATTGTATCAACGCGCTAATTTTGTGATTTAAGCTGTATGTAACGGATTATGAAATATAGGCCCTTTTTGTGTATGGTTATGGAACGGACCTAGAAGGCTCAAATTTTTACCACTAGACCAAAAATAGCTTTGTACCACCGGCTACAAGTACGGCCGTAGGGTTGTACACCGGTCCACAACCGGACCAGACTGGACCGTAACCATAAACTAGGAAATTTGTGGTCCGAAAAATTTCTAGTCCAGTCTAGGTTTAGACCGAATTAGACCTAAATTATTGAATATGCC ATGTTGGTAAGAGGGTCATTCCTTCCACTTTGGAAAATAAGGAGAGGTAGCCAAAGCAAAATAAAAATGGGGACATCATGGGAACAACGTTTGCCTGCAATAGCAATGGTGTCTATGCAAGTGTTGTACGCAGCAATGGCTCTCTTGAATAGGGCTGCCCTTGTTAAGGGCATGAGTCCTAGAGTCTTCATTTTCTATCGACAAACTATTGCTACTTTGGTTATTTCTCCCATCGCTTATTTCACAAGGAGACGATCTAATACTACTACGCCGAGTATAGGATTTAAGAGCTTTGTTTTGATCTTCATCACAGCCTTCATTGGGGTGACTCTCAATCAGAACATGTACTTTGAAGGATTGTACTTGGCTTCTTCATCAATTGCAAGTGCAACATACAACCTTATCCCTGCTGTCACTTTCATGACTGCTGCCGCCTTCGGGTTGGAGCAAGTGAATGCAAAGACATTAAGCAGTGCAGCAAAGATATTAGGGACAACCTTTTGCGTTGCAGGAGCAGTTTCTATGACATTGTTGAGAGGTCCGAAGCTACTTAACTCGCAACTTCCATCATCCAACTCTGCATTTCTGCACTTGTTTGCGGTTGACCAAACCTGGTTCCTAGGTTGTGTATGTCTCCTTGCAAGTAGTTGTTGCTGGTCCTTGTGGCTCATTTTACAGGTCCCAGTTACAGCTTGTTACCCTGACCACCTATCTCTCTCAGCATGGATGTGTTTCGTATCAATGCTGCAAACTGGTGCAGTTGCCTTGTTCTTAGAACCTGATCCTGTTGCTTGGAATTTAAGTTCGGGCCTTGAACTCACCTGTTGCTTTTTCTCGGGAATTGTAGGATCTGGGGTACAGTTCTTTGTTCAATCCTGGTGTATATCGCGTAAAGGTCCATTTTACTCTGCTATGTTTACTCCTCTAGCCACTGTCATAACCACTGTTCTAGCCTGCATTTTTCTCCATGAAGAGCTTTATCTTGGCAGTTTACTAGGTGCTACCACAGTCATCATCGGCTTATATGTCGTATTGTGGGGTAAATCCGAAGAGGTTAAGGAAAAACTGCATCTTACATCAGGAGCTTGTCCAGTAAAAATAGACCAAGAAAAGAAAAGTGAGAAAATTGATTTGGAACAACCACTTTTGACAAATGATAGTATTACTCCTAATTAG MLVRGSFLPLWKIRRGSQSKIKMGTSWEQRLPAIAMVSMQVLYAAMALLNRAALVKGMSPRVFIFYRQTIATLVISPIAYFTRRRSNTTTPSIGFKSFVLIFITAFIGVTLNQNMYFEGLYLASSSIASATYNLIPAVTFMTAAAFGLEQVNAKTLSSAAKILGTTFCVAGAVSMTLLRGPKLLNSQLPSSNSAFLHLFAVDQTWFLGCVCLLASSCCWSLWLILQVPVTACYPDHLSLSAWMCFVSMLQTGAVALFLEPDPVAWNLSSGLELTCCFFSGIVGSGVQFFVQSWCISRKGPFYSAMFTPLATVITTVLACIFLHEELYLGSLLGATTVIIGLYVVLWGKSEEVKEKLHLTSGACPVKIDQEKKSEKIDLEQPLLTNDSITPN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14333.1 vs. NCBI nr
Match: gi|902217087|gb|KNA17615.1| (hypothetical protein SOVF_077790 [Spinacia oleracea]) HSP 1 Score: 718.0 bits (1852), Expect = 8.900e-204 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 1
BLAST of Spo14333.1 vs. NCBI nr
Match: gi|731352737|ref|XP_010687694.1| (PREDICTED: WAT1-related protein At4g30420 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 561.6 bits (1446), Expect = 1.100e-156 Identity = 292/365 (80.00%), Postives = 313/365 (85.75%), Query Frame = 1
BLAST of Spo14333.1 vs. NCBI nr
Match: gi|1003703395|gb|AMO65274.1| (auxin-induced protein 5NG4 [Beta vulgaris subsp. maritima]) HSP 1 Score: 557.0 bits (1434), Expect = 2.600e-155 Identity = 289/365 (79.18%), Postives = 312/365 (85.48%), Query Frame = 1
BLAST of Spo14333.1 vs. NCBI nr
Match: gi|731352739|ref|XP_010687695.1| (PREDICTED: WAT1-related protein At4g30420-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 485.7 bits (1249), Expect = 7.500e-134 Identity = 257/363 (70.80%), Postives = 296/363 (81.54%), Query Frame = 1
BLAST of Spo14333.1 vs. NCBI nr
Match: gi|567922976|ref|XP_006453494.1| (hypothetical protein CICLE_v10008665mg [Citrus clementina]) HSP 1 Score: 401.0 bits (1029), Expect = 2.400e-108 Identity = 211/358 (58.94%), Postives = 269/358 (75.14%), Query Frame = 1
BLAST of Spo14333.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDS6_SPIOL (WAT1-related protein OS=Spinacia oleracea GN=SOVF_077790 PE=3 SV=1) HSP 1 Score: 718.0 bits (1852), Expect = 6.200e-204 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 1
BLAST of Spo14333.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUE8_BETVU (WAT1-related protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g192100 PE=3 SV=1) HSP 1 Score: 561.6 bits (1446), Expect = 7.500e-157 Identity = 292/365 (80.00%), Postives = 313/365 (85.75%), Query Frame = 1
BLAST of Spo14333.1 vs. UniProtKB/TrEMBL
Match: A0A140IK40_BETVM (WAT1-related protein OS=Beta vulgaris subsp. maritima PE=2 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 1.800e-155 Identity = 289/365 (79.18%), Postives = 312/365 (85.48%), Query Frame = 1
BLAST of Spo14333.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BU94_BETVU (WAT1-related protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g192110 PE=3 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 5.200e-134 Identity = 257/363 (70.80%), Postives = 296/363 (81.54%), Query Frame = 1
BLAST of Spo14333.1 vs. UniProtKB/TrEMBL
Match: V4WJ12_9ROSI (WAT1-related protein OS=Citrus clementina GN=CICLE_v10008665mg PE=3 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 1.700e-108 Identity = 211/358 (58.94%), Postives = 269/358 (75.14%), Query Frame = 1
BLAST of Spo14333.1 vs. ExPASy Swiss-Prot
Match: WTR37_ARATH (WAT1-related protein At4g30420 OS=Arabidopsis thaliana GN=At4g30420 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 4.600e-91 Identity = 181/364 (49.73%), Postives = 236/364 (64.84%), Query Frame = 1
BLAST of Spo14333.1 vs. ExPASy Swiss-Prot
Match: WTR36_ARATH (WAT1-related protein At4g28040 OS=Arabidopsis thaliana GN=At4g28040 PE=2 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 6.000e-75 Identity = 153/323 (47.37%), Postives = 215/323 (66.56%), Query Frame = 1
BLAST of Spo14333.1 vs. ExPASy Swiss-Prot
Match: WAT1_ARATH (Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 8.400e-61 Identity = 140/341 (41.06%), Postives = 196/341 (57.48%), Query Frame = 1
BLAST of Spo14333.1 vs. ExPASy Swiss-Prot
Match: 5NG4_PINTA (Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.100e-56 Identity = 135/368 (36.68%), Postives = 200/368 (54.35%), Query Frame = 1
BLAST of Spo14333.1 vs. ExPASy Swiss-Prot
Match: WTR45_ARATH (WAT1-related protein At5g64700 OS=Arabidopsis thaliana GN=At5g64700 PE=2 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 4.800e-56 Identity = 126/358 (35.20%), Postives = 205/358 (57.26%), Query Frame = 1
BLAST of Spo14333.1 vs. TAIR (Arabidopsis)
Match: AT4G30420.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 336.3 bits (861), Expect = 2.600e-92 Identity = 181/364 (49.73%), Postives = 236/364 (64.84%), Query Frame = 1
BLAST of Spo14333.1 vs. TAIR (Arabidopsis)
Match: AT4G28040.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 282.7 bits (722), Expect = 3.400e-76 Identity = 153/323 (47.37%), Postives = 215/323 (66.56%), Query Frame = 1
BLAST of Spo14333.1 vs. TAIR (Arabidopsis)
Match: AT1G75500.1 (Walls Are Thin 1) HSP 1 Score: 235.7 bits (600), Expect = 4.700e-62 Identity = 140/341 (41.06%), Postives = 196/341 (57.48%), Query Frame = 1
BLAST of Spo14333.1 vs. TAIR (Arabidopsis)
Match: AT5G64700.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 219.9 bits (559), Expect = 2.700e-57 Identity = 126/358 (35.20%), Postives = 205/358 (57.26%), Query Frame = 1
BLAST of Spo14333.1 vs. TAIR (Arabidopsis)
Match: AT3G53210.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 213.0 bits (541), Expect = 3.300e-55 Identity = 128/361 (35.46%), Postives = 199/361 (55.12%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14333.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo14333.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo14333.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo14333.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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