Spo14373 (gene)

Overview
NameSpo14373
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 12835379 .. 12839081 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGATAGTTTCTTGTCAATTTTATGCGTTTACAGGGTCAGCATATTCTGTAAAATGGAATTTATATGGAGTCCCAATGAAATTTCTCCTGTTTCTCATGATCATCTCTACTGCTACTGGAAGATTTCATCTCAGTATATTCACTTCCCAGCACGAGGTAATTGCCAATTCATTCAGGAAATCTTGAAATTCATCATTAAATTTTAGATTTGATTATAAAAAGGGGATTTTGAGTTCTGCTACATAACAAACATATGAAGTGCATGAGAAACATAAGTGATCTATTTTTTCACAAGTCATTTCTAATCAAATTATTAATGCTTACTCTAAAATTTAATGATTCTACACCTACTGTCTATAGAAATCTAATTCCAATCTAGTCTAGTCTAGTATTTTAATACAAAAAACTTAGATGCCACGGTGCCACCTGTCCCCTTCCTTTTATCTATCATTTAAAAAAAAAATCAACATCAATTCACCATCTAATCCATGTATTTCTTCAATCTCTTCCACTTTATCTTCCCCCTTTTCAATATTAATTGAATCAATTTCTCAATTGTTCCCCCTTCCTTTTGATTCTGTCTCTCTTAATGTCAATCACCAACTTACCAATTACCATAGCTTGGAGAATGAGTCTAGTGTGACACTTTAACCGTAAACGAAACCAAGAGACTAATTCCCCAAATAATAATGTGAAAACCTTTTCGAACTTGTCACATGGAACAATAATAACCTACTAATGTATTACATATACTTACAGGCTTTCTAGAGCATTAAAATTTCCGGTCCACCAAGATGGAACTCATTAAATAAAAAAGTAGCAATCGCCATTTTGATTCACAACAAGATATTTCCCAAAGGGGTGACCTGAGAACACAAGAGTTAATTAGCCACAGACCACCATAATATTAGTAATGGCAACACCATATTTGCAAAGCTAATTACAGCTTGTGTTCTCAGTATCACTCCTCTGGGGTGTATCCCCTGTTTCCCTTTAGGACTTCAATCTCTAATCAAATCACATTCTCTATTTAAAATTTGGTTGCATTCTATATTTCTATTGTTATTCTGTGTTTTATATGGTAAAAACATGACACTATGTTGTCACGTGACGACATAGTCATTTATGTCTTGGCATACTTCTTCTATGATGTTGTCATTCTTTAGTCAAAACACTTCAGCAACTACTAGTAGATAGACCGCATGGATGGGTATATGAGCCATTGTGTTTGTCCACTCGGATGTTAAAATATCTTCATAAAATGAGTCATCAACCTCCCATCTTCCACGCCCTTATAAATAAATTTGACTGTCAACCATTTCTTTTACCTCCTCACACAATCAACTTCATCATTGTACCTTTTGTAAAGGTAAGATGATCTTAATTTTATCAGTATATATTTCCTCTCTGCAACAATATCTAAAAAAAGTTCCTTTTCATTTGATTGGTGTATTAATCTATTTGTTATTCTATTTTAGAAGATCATTTATCGGATTTTAAGTTATCATCAATTGTTTGCTACCCTAAATTTTGTTTGAATTGAGATAGTCTTAAACTTGAAAAAGTGTTACGAACAGGAATTTTTCTGTTTATTTATATCTTTACATTAACTAAACATTAGGGAAAACAGAATATTCTTATACCTAAAGGTAGTTACACGATGAACATTGTGATATTTTCAAGGAAAAATTGTTATTGACAGTTCCAACTATGGCCGTTTAACTTTTAAAGGTCCCAACTTTTGATTATTCTAGAGTGGTCTCAACTTTAAGGTGTGTTTTCCAAGAATGGTCCTTTGGTTTATTAAACTATTAATTAAGTTGATTTAAGCATATCATACTGTTCCATTTACTTCATTTAATTAAAAAATATGATTATTGCACGAGAGATATGAGTGTTAATTAAGTTATTTAGCACTTAATTTTAACTAAGGGACCATTTTTGGAAAACACTCTCTATAGTTGGGACCACCATGACATAATCAAAAGTTGGGACCTTTTAAAGTAAATCGGCCATAGTTGGGACCGATATTATCAATTTTTCCTATTTTCAAACAATAGTTGTAGAGAGGTCCAAATGCTAGTTGTATCTTAAATGAATTGCTTATCCTCCTGTGAGATTTATTTTTCAGATGCATTTGTTTTCAGCATCTGTGAAATAACTTTGTGAAACACAAAAAAGAAGCTGACAATCGACCTTACAATAATACATGACCGTTATTATGAAACCTGATAGTCTGAGCTCAAATATTCAAGGGTTCTACAGCTTCCACTTCTTTTTGCTTCATCTTCTCCATTAAACTATGATCTTCTTTTGCAGCTTCACAGGCCTCTTCTGTCTTCTGTTGTTCCATCCGTGCTTCCCCATTTTGACTTGTCTGGACCAACAGCTTTTTCACCCAATCAAGCAACTGCTCAGTTGCTGCCTCATCTGCTTGTTTCACTCACTCATCAGTCATCAATCATCAATCATTTGGATACACTATTAAATCCTCTATTAATCTCCATTTGACTCAGGCAGCCAAAATCTGATAAAAAATAATAATGTCTAGATTTATGTCAAGGAATTTCTTTTATAAGATTATTGATTTGCAGTACTAAGTTTTCGTTACTTCTATTATTTAGTGATAGATTATTGATTTATAGTACTAAGTTTTCACACAAGTGAAATGTCAGTCTGTTATGTTCGAGAACTGATATGTAACTAGAAGTTCCAAAAATGAAGTGTGTCAATCATTTATGGATGATTGTTATCCCAATATGCAGGAAGATATATACCTAGTCTTGGGACAGTGTGGCCTTGAGGGTGCCTTATAATAAGAGGATCCCGAAAAGCCTTAGCAAGATCCTCAGAGGGAAGCTTTAACCAATCCTTTTCTCCAATAAAGTGAACTGATTTAACCTTGTTAGGTTCTTTGTAGGCAACTTCACAAATGCTTGGAATCCGGAACTTCGATCCAGAAACTGATATGAAGAATTTGAAAGGTGGATGATCCTTCAACACCTTCCCCTGTGATTGGTATCCAATTAGAAGAGCTGACAATGTTGCTCCCTGCAAACAAAATTGTTTAAAATTCTTAGTCATTTTCGTAACTAAAGTCGAGTTTTCATTTGATTCAAAGATGATTAGAAGATGTTACCTGAGAAAAGCCCAGGAGACCATCAAAAGGTCCCTTAGTGGTGATGTATTCACACAAGTATGAGATGCACTCTTCCAAGTTAGTATACTCTGTAAATTCCTTCCAAGGAGAAAAGTATCGGTTATCGGTTAGTAAAATCGCTAAACACCCATATAGAACCCAAAGTGGGTTGTTCCGAGCCTCAACACGGCTGTGGCACAGCCTGACACAATATTATGAGCCATCCCAGACAACTTGCTGTGTTTTTCCTAAGCTTAGTAAATTCTGTAACTGTGTTGTTGAGGTTGGACCGGAGTATTAACACACAACTTAATTCTAGTTGGTGAGAAATACGCAAAAGATGCATGAATGGCTCTATTTTTTTGGTGCAAATGAGCCACAAGGGCAAGAAAAATTACAAATAGAGAGTGAGATTCGAACCTGAAACTTATTGCACTCAGACTCCCAATCTTAACTACTAGTCCTAAACCTCGTTGGTTAAAAATGCATGAATGTATGTATTAAATTGTATGGTTATATGAATCAATACCTTGTTGAACTGGAACCATTCATAGTACGGA

mRNA sequence

ATGATTGATAGTTTCTTGTCAATTTTATGCGTTTACAGGGTCAGCATATTCTGTAAAATGGAATTTATATGGAGTCCCAATGAAATTTCTCCTGTTTCTCATGATCATCTCTACTGCTACTGGAAGATTTCATCTCAGTATATTCACTTCCCAGCACGAGTCAAAACACTTCAGCAACTACTAGTAGATAGACCGCATGGATGGCTTCACAGGCCTCTTCTGTCTTCTGTTGTTCCATCCGTGCTTCCCCATTTTGACTTGTCTGGACCAACAGCTTTTTCACCCAATCAAGCAACTGCTCAGTTGCTGCCTCATCTGCTTGCAACTTCACAAATGCTTGGAATCCGGAACTTCGATCCAGAAACTGATATGAAGAATTTGAAAGGTGGATGATCCTTCAACACCTTCCCCTGTGATTGGTATCCAATTAGAAGAGCTGACAATGTTGCTCCCTGCAAACAAAATTGTTTAAAATTCTTAGTCATTTTCGTAACTAAAGTCGAGTTTTCATTTGATTCAAAGATGATTAGAAGATGTTACCTGAGAAAAGCCCAGGAGACCATCAAAAGGTCCCTTAGTGGTGATGTATTCACACAAGTATGAGATGCACTCTTCCAAGTTAGTATACTCTGTAAATTCCTTCCAAGGAGAAAAGTATCGGTTATCGGTTAGTAAAATCGCTAAACACCCATATAGAACCCAAAGTGGGTTGTTCCGAGCCTCAACACGGCTGTGGCACAGCCTGACACAATATTATGAGCCATCCCAGACAACTTGCTGTGTTTTTCCTAAGCTTAGTAAATTCTGTAACTGTGTTGTTGAGGTTGGACCGGAGTATTAACACACAACTTAATTCTAGTTGGTGAGAAATACGCAAAAGATGCATGAATGGCTCTATTTTTTTGGTGCAAATGAGCCACAAGGGCAAGAAAAATTACAAATAGAGAGTGAGATTCGAACCTGAAACTTATTGCACTCAGACTCCCAATCTTAACTACTAGTCCTAAACCTCGTTGGTTAAAAATGCATGAATGTATGTATTAAATTGTATGGTTATATGAATCAATACCTTGTTGAACTGGAACCATTCATAGTACGGA

Coding sequence (CDS)

ATGATTGATAGTTTCTTGTCAATTTTATGCGTTTACAGGGTCAGCATATTCTGTAAAATGGAATTTATATGGAGTCCCAATGAAATTTCTCCTGTTTCTCATGATCATCTCTACTGCTACTGGAAGATTTCATCTCAGTATATTCACTTCCCAGCACGAGTCAAAACACTTCAGCAACTACTAGTAGATAGACCGCATGGATGGCTTCACAGGCCTCTTCTGTCTTCTGTTGTTCCATCCGTGCTTCCCCATTTTGACTTGTCTGGACCAACAGCTTTTTCACCCAATCAAGCAACTGCTCAGTTGCTGCCTCATCTGCTTGCAACTTCACAAATGCTTGGAATCCGGAACTTCGATCCAGAAACTGATATGAAGAATTTGAAAGGTGGATGA

Protein sequence

MIDSFLSILCVYRVSIFCKMEFIWSPNEISPVSHDHLYCYWKISSQYIHFPARVKTLQQLLVDRPHGWLHRPLLSSVVPSVLPHFDLSGPTAFSPNQATAQLLPHLLATSQMLGIRNFDPETDMKNLKGG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14373.1Spo14373.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo14373.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14373.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14373.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14373.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0043407 negative regulation of MAP kinase activity
biological_process GO:0035335 peptidyl-tyrosine dephosphorylation
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009733 response to auxin
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0019344 cysteine biosynthetic process
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression
   



Co-expression
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