Spo14438 (gene) | SpinachBase

Overview


Name	Spo14438
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Histone H3
Location	chr2 : 39995317 .. 40000673 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGGAGTCAAGAAACCCCATCGTTACCGCCCTGGAACTGTTGCTCTTCGGTAATTTTCTCAATTGAAACATTTAATCATCCACATTTTCATTCTATTACTTAGAAGGGCTCATTGTTTGAATATAATTTTGATAATCAGTGAAATCCGCAAATACCAGAAGAGCACTGAGCTTTTGATCCGCAAACTCCCTTTCCAGCGTCTTGTTCGTGAAATTGCCCAAGATTTCAAGGTAAAGTCATAATTCAATTTATTAAAGTTTCGAATTAGTCGTTTTTTGAAATGTTATTGATTAGGGTTTGTGTTGTTGGAAATGAACAGACTGATCTGAGGTTCCAGAGCCACGCAGTATTGGCACTTCAGGAGGCTGCAGAAGCATACCTTGTGGGTCTCTTTGAAGACACCAACTTGTGCGCCATTCACGCTAAGAGGGTGACCATCATGCCTAAGGACATTCAATTGGCACGTCGTATTCGTGGTGAGCGTGCTTGAGAATATTGAAGATTGGAGTAGAGCAGTATTTAGAAGGGTTTTTATTATTATCAAGTGTTTGAGATACATTAATATTTTGTAGATTTGGTGTTGTTGGTGGTGTATATACCTCTAGACCAACTGGAAAATGTTTTGAAAATTGGAATACATTGCATACTTTTGATGTTTAGAGATTGTATTACTGTTTATGATATTTTAGTTGTTTCTGAAATCAATGTTTCATGTTCTGTGATGATTGGGCGATTTGATGTATTGTTTCGTTTCGGCTAACTCAACGATACGCGATTGCTTCCGAAGATATATGTAGGGTAGTTCTGGTTTGATGATGATTGTGATTCCCCCAATTTTCTGTTGATTGGGTTGTTTGATGTATTGTTTCTGTATTTGCAAAATTGTCAAAGCCTTCAATTGAGAGAAAATGTTCATCAGAATCCTTTCCTTTTGTCACTCTCACCTTTGTTTTCACAGCCAGCTTCATTTGTATATGATCTCCCTCGCCGCCTCCAATCGAATAATCTAGGTACAAGGGAAATATTCTACGGAGTACTAGTTAAAATTTGTCTAATTCCGAATTACATTTTGCATCTGCTAATTTATGTCGTACCTTTGAGTTAATATTCTACTCCATCCGAATTTAAAAAAATATTTTCCCCATTTAGAACCTTGACAATATACCTTTGAGTATGATTTACGGAGTACTTTATTAACATTTGAGTGTGAAATGTGCATATGAAAAATCACTCAATAAGGTACAGTGACATTAAAAAAAAAAATGGATATTTCATGAAATATCCCTGAGGTTTAAGTTAATTCACCAGGTACCCTCGTTGTTTCAGTAATCTACCAGGTACCCCCCTGCCGTTAAGTGGCCGTTAGAAACTTTTTTTCACCAGGTACCCTCGTAATTTATTTCACCAGGTACCCCTGAGGATTTTTAGATTTTCACCAGGTGCTCTTGTGCTTTATGGTAATTTCACCAGATACCCCTGCTCACCAACGGCTAGTTTCACCAGGTTTTGTTCTGTAACAGTTGCTGGGGGAGGGGAATATGAAGTGAAAGAGGGGGCTGTCAAATACCCTATTAAGTTTGATGCAAGGACTTGTGGTTGTGGAGTATGGCAAATATCTGGCATACCTTGCAGACATGGCCTTAGGGTTATTTACCACCAAAGACTTGAGGCTACTGATTTTGTGTCTCACTACTTCAAAGGGCAAGCATACAAGTTAACTTACTCAGAGCACATACACCCCATGCCTGACCCAACCCAATGGCCTTCTTTTGACCTTCCTATTATCCTCCCACCACCCATGAAGAGAGCATCATGTAGACCCCCTAAACTGAGAAAAAGAGGTAAACATGATCCAAAAAGGGGAAAGAGAAATAGCACTGTGAGGTGTGGTAAGTGCAAGGAGGTGGGACACAATGCAAGGACATGCAGAGGTGGGGCCACTGCAAAGCAAAAGAAGGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGCTTCTGGTTCTGCTGGTGCAGCTGGTTCACAGCAAGGGGGAGATCAAGGTGCTTCCAGTTCACAGCAACAACGTAATGCATCAAGTAAGGGAAAAAGGAAGCGTACTTGATTTTGTGATTTATGCATAACTTTTTGCTAAACTTATCATGTATATCTTTTGCCAATGAGAGCAAGTTTTTGTAGAGCTACACTTAAAGTTTTTGCGTGTCGGGGACACACTTTTGTAAAGCTACTTAATTCGGAAATGAAATATCATATTATTGATGAAATGTCATCATTCACTTTCTCATTACAAATATTAGAATAAAAAACATTACAATGCCAATATTGATAGTTCCATGCATTAATTTCTTTTGCTGCTTGAGTTTCTTCTTCATTTGGTGAATTTCTTCATCCAAGCTTCTGTTTTCTTCAATTTCTCCTTCCTTTGTGCTACCTCTGTTGTTTCTGATTGGCAGTGGTTGCTCAATGCTTCCCTTGCACCACTTGAAGTTGTCACATAAGTCACACTTGTAATATAGTCTTTGAGGATTTTTCATTGTTTCAGAACTTCTTATTGCAAATTTTTTCCCACATATGTTGCATGTTTTGTTTGGAACTACAACGTATGAGGATTCATACGTTGTAGAAGAAGATTGGGATTGAGAATATGAGCTCATTTGAAGGTGAGTTGGGATTTAGGGAAAATATGAGTTGGTTAAGGGGAAGAACATAAATTTGTAGTGAAGAGTTGCAGCGGCTCCCCCTTTAAATAGAGAAGGCTTACCAACGGCTAGTTTTTTTTAAAAAAAACTAGCCGTTGGTGAGCAGGGGTATCTGGTGAAATTACTATAAAGCACAAGGGCACCTGGTGAAAATCTAAAAAACCTCAGGGGTACCTGGTGAAATAAATTACGAGGGTACCTGGTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATGGTTGAGTCATAACGGAATCTCAATTTGTAAATCATGTAAAGTGAAACTGAATAGCAATAGCTTTAGACTGTGCACGTCTGAAGTGACGGACAAACAGGAGTTGGGGTTCATGGTGGTAGCCCATGGCCTTTTCTGGGACCGGATTGATCACCGCGTTCTATTTTTTATTCAAACGTTCCTCGATATCGCAGGTCACTGAGGTTTCGGAGTCGCGCCCGTACCTCGTCTTCCTTGGGGAAGACTTTTGGTTGGACAACTCGGTCCATTGTCTATTCCAACTAAAATANGGGAAGACTTTTGGTTGGACAACTCGGTCCATTGTCTATTCCAACTAAAATAATATTATGGTTACTAAGTCTAGCTTAGTCTAGTCAAGTATGGTCGTCAAATTATTATGTTTTGTCTGTCCTTACTTATATTTATTAGTATCATGTTAGGGTTGTTAGTTTGGTAGTATCATGCTAGGATTGTTGTTGTTTTAGTATGTAGTACTCAGCTTTGCTGATTACGTGCTTTGTTTGTGTGTGTTGATCATGGCTATGCCTTATTGATCCTGTGATGACCCATCTTTGGTGAGCAGTCTCTAAGGATCAATAAGCGTTGCCCATCTACAGGTTTGAAGATGATGCATCATTGGGATCGGGATTAGAGAGCTTGTAGTTCTATTTGTTTAATTAAGTGATTTAATTTGTTAACTTGGATTTGAAATTTGTCGTACTATTCGTATTTCCTTATTTCAGTTAATTGGTTTGGACCTAATATGTAATAGATTATTTATGAACCTAAAAGTTAGTTTTATGTTTTCCGCTGCAAAATTCTGAATAAGCCGTAACGTTTTCACACGGGCGATAATACTTTGATAATTCCCTACAGTTATATTTAAAAAGGGATTACTTTAGAAAATGGGAATTGTTGGGGTGTTACAAAGTGGTATCAGAGCTAAAGGTTTTACTGACATTTCGTGTCTACCTTTTTAAATTTTAGGCACCTAACTAACTAATTAGTTACATAAAAAGAATNCACTTAACGGCAGGGTTAAGTCATGCGAGAAAATGAAACCTGAGGGGTACCTGGTAGATTACTAAAACAACGAGGGTACCTGGTGAATTAACATAAACCTCGGGGGTATTTCATGAAATATCCGAAAAAAAAAAGAATATGACCATATGAGAATCTTTTATGCATTGAGGTAGAGCTGTGAAAACAGGTTTCGGTGCAGGTTGGGTTTTGTTGGTTTGGTTTTCGGTTGGGTCATGTCGGGTTTTCTTTCCTCATTTCGGATACAAGTCGGGTTCGGGTTGAGTCATGTTCGGGTCGGGTTTAATTTCGGGTTTGGGTTTTATATAGTCGGGTTTGTAGTAGTTAATCTCGGGTTTGGGGTCAAGTTTGGATCGAAAAATTTCCGAGTCGGTTAAAATTCAGGTCGGGTTCACTCTTGAACACGGGTTAAGATTGAGTCAATAACTGATTTGGTCATCTCAAAATATTCAAGCGTAAAATATTTACTGTACATGTCGAGTCACTAACAGGTTATGTGGTAAAAATCTGGATAAGGTCATTGTCGGGTATCGAATCGGGTTCAGCTCATTGTTCAGTCGGCTCTGTTCGGTTATCAGTTATCTTTCGGTCGGGTATCGGGTCTTACAACAGCGGGTTAAAATCTGTTGTCGGTTTTTCGGATTTGGTACATGTCGAGTTTCGGGTTACCTGTTTTACCAAAAATTTCGGTCATGGTCGTTGCGGGTTCGGTCTGTTCAGGTCGGGTTTTCGGGTCGGGTCAGTTTTTGACAGCTCCACATTGAGGGAGTATTATAGAATTTTCCTTAGTTTTTTTATCACTAATTTATGCTGTTTGTATACACGGGCTATACTCCTAAGGGCTAAGGCCTTGTTCTCTTCAACTTATAGAATCTTATTTTCAGGTCCTATAAGTTCAGATAAGTCCTATAAGTTGAATAAGGTCCTA

mRNA sequence

GGAGGAGTCAAGAAACCCCATCGTTACCGCCCTGGAACTGTTGCTCTTCGTGAAATCCGCAAATACCAGAAGAGCACTGAGCTTTTGATCCGCAAACTCCCTTTCCAGCGTCTTGTTCGTGAAATTGCCCAAGATTTCAAGACTGATCTGAGGTTCCAGAGCCACGCAGTATTGGCACTTCAGGAGGCTGCAGAAGCATACCTTGTGGGTCTCTTTGAAGACACCAACTTGTGCGCCATTCACGCTAAGAGGGTGACCATCATGCCTAAGGACATTCAATTGGCACGTCGTATTCGTGGTCCTATAAGTTCAGATAAGTCCTATAAGTTGAATAAGGTCCTA

Coding sequence (CDS)

GGAGGAGTCAAGAAACCCCATCGTTACCGCCCTGGAACTGTTGCTCTTCGTGAAATCCGCAAATACCAGAAGAGCACTGAGCTTTTGATCCGCAAACTCCCTTTCCAGCGTCTTGTTCGTGAAATTGCCCAAGATTTCAAGACTGATCTGAGGTTCCAGAGCCACGCAGTATTGGCACTTCAGGAGGCTGCAGAAGCATACCTTGTGGGTCTCTTTGAAGACACCAACTTGTGCGCCATTCACGCTAAGAGGGTGACCATCATGCCTAAGGACATTCAATTGGCACGTCGTATTCGTGGTCCTATAAGTTCAGATAAGTCCTATAAGTTGAATAAGGTCCTA

Protein sequence

GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSYKLNKVL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo14438.1	Spo14438.1	mRNA

Homology

[Close]

BLAST of Spo14438.1 vs. NCBI nr
Match: gi|728811857|gb|KHG00494.1| (Histone H3.3 [Gossypium arboreum])

HSP 1 Score: 199.1 bits (505), Expect = 4.100e-48
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSY 109
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG   + K+Y
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGWSDAVKTY 141

[Close]

BLAST of Spo14438.1 vs. NCBI nr
Match: gi|920696473|gb|KOM39698.1| (hypothetical protein LR48_Vigan03g308000 [Vigna angularis])

HSP 1 Score: 198.4 bits (503), Expect = 6.900e-48
Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 11  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 70

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSYK 110
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG  S + + K
Sbjct: 71  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGEQSVEAARK 119

[Close]

BLAST of Spo14438.1 vs. NCBI nr
Match: gi|145334271|ref|NP_001078516.1| (Histone H3.3 [Arabidopsis thaliana])

HSP 1 Score: 196.8 bits (499), Expect = 2.000e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 62  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 121

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 122 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 161

[Close]

BLAST of Spo14438.1 vs. NCBI nr
Match: gi|643729023|gb|KDP36960.1| (hypothetical protein JCGZ_08251 [Jatropha curcas])

HSP 1 Score: 196.8 bits (499), Expect = 2.000e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 16  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 75

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 76  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 115

[Close]

BLAST of Spo14438.1 vs. NCBI nr
Match: gi|944265898|gb|KQL30138.1| (hypothetical protein SETIT_018284mg [Setaria italica])

HSP 1 Score: 196.8 bits (499), Expect = 2.000e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 122 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 181

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 182 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 221

[Close]

BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MLX3_GOSAR (Histone H3.3 OS=Gossypium arboreum GN=F383_18206 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.800e-48
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSY 109
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG   + K+Y
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGWSDAVKTY 141

[Close]

BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UAB0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g308000 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 4.800e-48
Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 11  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 70

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSYK 110
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG  S + + K
Sbjct: 71  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGEQSVEAARK 119

[Close]

BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: A0A0V0YQI4_9BILA (Histone H3.3 OS=Trichinella patagoniensis GN=T12_14535 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.400e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 5   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 64

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 65  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 104

[Close]

BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: W5AUU5_WHEAT (Histone H3 OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.400e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: A0A0B2EVW9_9BACL (Uncharacterized protein OS=Paenibacillus sp. IHB B 3415 GN=QW71_36435 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.400e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_011536 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_ORYSJ (Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3 PE=1 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_GOSHI (Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_ARATH (Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_LOLMU (Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT4G40040.1 (Histone superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 7.100e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT4G40030.2 (Histone superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 7.100e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 62  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 121

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 122 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 161

[Close]

BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT5G10980.1 (Histone superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 7.100e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT1G75600.1 (Histone superfamily protein)

HSP 1 Score: 195.3 bits (495), Expect = 2.100e-50
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQD+KTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRG 133

[Close]

BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT1G09200.1 (Histone superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 8.700e-49
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 1

		  
Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV AL
Sbjct: 34  GGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133

The following BLAST results are available for this feature:

BLAST of Spo14438.1 vs. NCBI nr
BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
BLAST of Spo14438.1 vs. TAIR (Arabidopsis)

BLAST of Spo14438.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|728811857\|gb\|KHG00494.1\|	4.1e-48	94.4	Histone H3.3 [Gossypium arbore...	[more]
gi\|920696473\|gb\|KOM39698.1\|	6.9e-48	93.5	hypothetical protein LR48_Viga...	[more]
gi\|145334271\|ref\|NP_001078516.1\|	2.0e-47	100.	Histone H3.3 [Arabidopsis thal...	[more]
gi\|643729023\|gb\|KDP36960.1\|	2.0e-47	100.	hypothetical protein JCGZ_0825...	[more]
gi\|944265898\|gb\|KQL30138.1\|	2.0e-47	100.	hypothetical protein SETIT_018...	[more]

BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0B0MLX3_GOSAR	2.8e-48	94.4	Histone H3.3 OS=Gossypium arbo...	[more]
A0A0L9UAB0_PHAAN	4.8e-48	93.5	Uncharacterized protein OS=Pha...	[more]
A0A0V0YQI4_9BILA	1.4e-47	100.	Histone H3.3 OS=Trichinella pa...	[more]
W5AUU5_WHEAT	1.4e-47	100.	Histone H3 OS=Triticum aestivu...	[more]
A0A0B2EVW9_9BACL	1.4e-47	100.	Uncharacterized protein OS=Pae...	[more]

BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
H33_ORYSI	1.3e-49	100.	Histone H3.3 OS=Oryza sativa s...	[more]
H33_ORYSJ	1.3e-49	100.	Histone H3.3 OS=Oryza sativa s...	[more]
H33_GOSHI	1.3e-49	100.	Histone H3.3 OS=Gossypium hirs...	[more]
H33_ARATH	1.3e-49	100.	Histone H3.3 OS=Arabidopsis th...	[more]
H33_LOLMU	1.3e-49	100.	Histone H3.3 OS=Lolium multifl...	[more]

BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT4G40040.1	7.1e-51	100.	Histone superfamily protein	[more]
AT4G40030.2	7.1e-51	100.	Histone superfamily protein	[more]
AT5G10980.1	7.1e-51	100.	Histone superfamily protein	[more]
AT1G75600.1	2.1e-50	98.0	Histone superfamily protein	[more]
AT1G09200.1	8.7e-49	97.0	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 1..22 score: 8.3E-61coord: 25..42 score: 8.3E-61coord: 65..81 score: 8.3E-61coord: 81..102 score: 8.3E-61coord: 47..65 score: 8.3
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 1..100 score: 4.3E
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 1..103 score: 2.2
IPR000164	Histone H3/CENP-A	PROSITE	PS00959	HISTONE_H3_2	coord: 34..42 scor
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 4..99 score: 1.0
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 1..101 score: 1.8
IPR009072	Histone-fold	unknown	SSF47113	Histone-fold	coord: 1..101 score: 6.77

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009611	response to wounding
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0030001	metal ion transport
biological_process	GO:0009932	cell tip growth
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0009816	defense response to bacterium, incompatible interaction
biological_process	GO:0006346	methylation-dependent chromatin silencing
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010200	response to chitin
biological_process	GO:0009966	regulation of signal transduction
biological_process	GO:0016246	RNA interference
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0043547	positive regulation of GTPase activity
biological_process	GO:0007165	signal transduction
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0015936	coenzyme A metabolic process
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0007229	integrin-mediated signaling pathway
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0018108	peptidyl-tyrosine phosphorylation
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0043687	post-translational protein modification
biological_process	GO:0006396	RNA processing
biological_process	GO:0009451	RNA modification
biological_process	GO:0006506	GPI anchor biosynthetic process
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0008033	tRNA processing
biological_process	GO:0043622	cortical microtubule organization
biological_process	GO:0051013	microtubule severing
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0010091	trichome branching
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0071482	cellular response to light stimulus
biological_process	GO:0035970	peptidyl-threonine dephosphorylation
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0010048	vernalization response
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009423	chorismate biosynthetic process
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0033587	shikimate biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0016571	histone methylation
biological_process	GO:0044070	regulation of anion transport
biological_process	GO:0006397	mRNA processing
biological_process	GO:0043631	RNA polyadenylation
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006909	phagocytosis
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0006412	translation
biological_process	GO:0032259	methylation
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0016123	xanthophyll biosynthetic process
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0016120	carotene biosynthetic process
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009790	embryo development
biological_process	GO:0051301	cell division
biological_process	GO:0042255	ribosome assembly
biological_process	GO:0009088	threonine biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009089	lysine biosynthetic process via diaminopimelate
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0015969	guanosine tetraphosphate metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006897	endocytosis
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0009853	photorespiration
biological_process	GO:0006605	protein targeting
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0006810	transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0008152	metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0080167	response to karrikin
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0009524	phragmoplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0048471	perinuclear region of cytoplasm
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005665	DNA-directed RNA polymerase II, core complex
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005839	proteasome core complex
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0030659	cytoplasmic vesicle membrane
cellular_component	GO:0005768	endosome
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005351	carbohydrate:proton symporter activity
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008308	voltage-gated anion channel activity
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004715	non-membrane spanning protein tyrosine kinase activity
molecular_function	GO:0004712	protein serine/threonine/tyrosine kinase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0003856	3-dehydroquinate synthase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004298	threonine-type endopeptidase activity
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0004072	aspartate kinase activity
molecular_function	GO:0032947	protein-containing complex scaffold activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0004652	polynucleotide adenylyltransferase activity
molecular_function	GO:0019706	protein-cysteine S-palmitoyltransferase activity
molecular_function	GO:0000035	acyl binding
molecular_function	GO:0045435	lycopene epsilon cyclase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0004672	protein kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo23751	0.78	Barchart \| Table
Spo12176	0.78	Barchart \| Table
Spo01914	0.77	Barchart \| Table
Spo24712	0.76	Barchart \| Table
Spo11095	0.75	Barchart \| Table
Spo14441	0.75	Barchart \| Table
Spo10775	0.75	Barchart \| Table
Spo04923	0.74	Barchart \| Table
Spo11733	0.74	Barchart \| Table
Spo06816	0.74	Barchart \| Table
Spo07586	0.73	Barchart \| Table
Spo13202	0.73	Barchart \| Table
Spo08546	0.73	Barchart \| Table
Spo05955	0.72	Barchart \| Table
Spo19089	0.72	Barchart \| Table
Spo01184	0.72	Barchart \| Table
Spo23556	0.72	Barchart \| Table
Spo21351	0.72	Barchart \| Table
Spo02107	0.72	Barchart \| Table
Spo01929	0.72	Barchart \| Table
Spo05731	0.72	Barchart \| Table
Spo14849	0.72	Barchart \| Table
Spo17371	0.71	Barchart \| Table
Spo23664	0.71	Barchart \| Table
Spo26266	0.71	Barchart \| Table
Spo20686	0.71	Barchart \| Table
Spo08540	0.71	Barchart \| Table
Spo27347	0.71	Barchart \| Table
Spo08272	0.71	Barchart \| Table
Spo12894	0.71	Barchart \| Table
Spo12202	0.71	Barchart \| Table
Spo00175	0.70	Barchart \| Table
Spo01204	0.70	Barchart \| Table
Spo02085	0.70	Barchart \| Table
Spo03019	0.70	Barchart \| Table
Spo03608	0.70	Barchart \| Table
Spo03618	0.70	Barchart \| Table
Spo07077	0.70	Barchart \| Table
Spo11098	0.70	Barchart \| Table
Spo12128	0.70	Barchart \| Table
Spo13516	0.70	Barchart \| Table
Spo16652	0.70	Barchart \| Table
Spo20170	0.70	Barchart \| Table
Spo24106	0.70	Barchart \| Table
Spo27102	0.70	Barchart \| Table
Spo07174	0.69	Barchart \| Table
Spo14856	0.69	Barchart \| Table
Spo12152	0.69	Barchart \| Table
Spo23679	0.69	Barchart \| Table
Spo23420	0.69	Barchart \| Table
Spo19874	0.69	Barchart \| Table
Spo19635	0.69	Barchart \| Table
Spo15362	0.69	Barchart \| Table
Spo06294	0.68	Barchart \| Table
Spo09090	0.68	Barchart \| Table
Spo10427	0.68	Barchart \| Table
Spo12253	0.68	Barchart \| Table
Spo12623	0.68	Barchart \| Table
Spo05029	0.68	Barchart \| Table
Spo14194	0.68	Barchart \| Table
Spo15420	0.68	Barchart \| Table
Spo15911	0.68	Barchart \| Table
Spo18575	0.68	Barchart \| Table
Spo00473	0.68	Barchart \| Table
Spo21784	0.68	Barchart \| Table
Spo22906	0.68	Barchart \| Table
Spo02175	0.68	Barchart \| Table
Spo24607	0.68	Barchart \| Table
Spo24625	0.68	Barchart \| Table
Spo00936	0.68	Barchart \| Table
Spo24857	0.68	Barchart \| Table
Spo25435	0.67	Barchart \| Table
Spo12006	0.67	Barchart \| Table
Spo10156	0.67	Barchart \| Table
Spo10053	0.67	Barchart \| Table
Spo06681	0.67	Barchart \| Table
Spo11339	0.67	Barchart \| Table
Spo14416	0.67	Barchart \| Table
Spo21067	0.67	Barchart \| Table
Spo05093	0.67	Barchart \| Table
Spo00898	0.67	Barchart \| Table
Spo22563	0.67	Barchart \| Table
Spo14687	0.67	Barchart \| Table
Spo03654	0.67	Barchart \| Table
Spo06199	0.67	Barchart \| Table
Spo11027	0.67	Barchart \| Table
Spo04012	0.67	Barchart \| Table
Spo13031	0.67	Barchart \| Table
Spo23610	0.66	Barchart \| Table
Spo01998	0.66	Barchart \| Table
Spo27226	0.66	Barchart \| Table
Spo14682	0.66	Barchart \| Table
Spo08772	0.66	Barchart \| Table
Spo06679	0.66	Barchart \| Table
Spo26833	0.66	Barchart \| Table
Spo16786	0.66	Barchart \| Table
Spo17021	0.66	Barchart \| Table
Spo06473	0.66	Barchart \| Table
Spo03381	0.66	Barchart \| Table
Spo19558	0.66	Barchart \| Table
Spo10017	0.66	Barchart \| Table
Spo02731	0.66	Barchart \| Table
Spo02184	0.66	Barchart \| Table
Spo09015	0.66	Barchart \| Table
Spo07199	0.66	Barchart \| Table
Spo23148	0.66	Barchart \| Table
Spo07252	0.66	Barchart \| Table
Spo25129	0.66	Barchart \| Table
Spo05225	0.66	Barchart \| Table
Spo05127	0.66	Barchart \| Table
Spo09351	0.66	Barchart \| Table
Spo01726	0.66	Barchart \| Table
Spo13459	0.66	Barchart \| Table
Spo19172	0.65	Barchart \| Table
Spo18194	0.65	Barchart \| Table
Spo04949	0.65	Barchart \| Table
Spo09803	0.65	Barchart \| Table
Spo24368	0.65	Barchart \| Table
Spo11296	0.65	Barchart \| Table
Spo06465	0.65	Barchart \| Table
Spo05753	0.65	Barchart \| Table
Spo19206	0.65	Barchart \| Table