Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGATGTGGACAAGTCTTGCGGTTGATGCATCAATAATCAATCTTCCCACCCACCGAAAATAACACGCGCGGAGTACTTTCTATTTGTACTCCAAGTTTTCCCCATTTTTCCAAGTAACACTCGATCTCATTTTCTCTCTCTAAATTATCGGCCATTAATTATGATGATAATGAGGGACATTGCTGCTGCATTCCTGGTGGTGTTCTTGGCTGTGGCAACCCCTGTTTTCGCCAATGATCCTGATATGCTCCAAGATGTTTGTGTTGCTGATTCTACATCTGGTACGTGTCATTCTCTCTCCTGTTCATTTTCATTTCGATTTCGATTTCATTTCGATTTCGAATCAGCTTATAATTGTAGTACTACCTTCGTTTCATAATGATCTTTACGGTAATTATAATTTACACAAATATTAAGAAAAAGATTGAGAATGTGGAAAAATACTAGTGAATAAGCAAATTTGCTAAAAAGGACATTTTATAACTCAAATTTTGCAGAAAAATTGGGTGTGGTTAACAAAATAAAGCCACGCGTGCTTATTACGTGCAAGTCAATGGCCGGAAAAGATCAGTCAATGCCGGGAACTTACTTTTGGTTGTCTTTCGCATATAAAAAAGTACATTAAGGTGTGATTTCACAAAAAAAATTATATAAGGTCATTTCTCGCAAAAAATTTACATTAAGGTTTGATTTCACAAAAAAATAAATTATATGAGATCATTTCTCGTAAAATTTGGGTTATAAAAGATCATTTTTAGTAAATTTGCCGAGTGAATATAATAAATATCTATAAAGTAAGCACATGCGTTTAAGAGAAAATGAGTGGAAAATGTAAATATGGTGGGGTAAAAGAGGTAAGAAAATAAAATTTCATGTCCAGAAGTAGTTTAAAGAACGATTTAAAGAATATTATGAAACAGATTAAAGCAAAAGTGTAGAGATCATTTTGCAGAGGTAGTAGTTAACAATTCATTGAATACATATGATTTACGCATACCCTTAATCGATCTCAATGCATTCATTTTAATTAGTTATAGTTAACAATATTATATTATATATAGTCAATATAACACTTTTTGTTACTTGTAATGTACTGCAATCGTAACAGTTTTCTTACAAAATACTTTCTTATATCTTACTCTTACACAAGGTTTATGCATCGAGTCGCATTAGCAACGCAAGTTGGTGGGGTTGGTGGGAAAACTCGACCTGTGATTTAAGTCACAAACCGTTGAGCCCTATCAGAGTATCAATTGCGTTATGTTTGGTTTGACTTAAACGTTGATCTGCATTGATAAAAGTCATACATAAAACAATGGTTAAAATAAATTACTCCCCTTAACAATTCACTTCAAATTACCGGGAAAATATGATATGTGGAATTGTGGAAATGATAGCATTCACCGAAAAACCAAACTAATGTCCAAAGATTAATGAATCACTTCGTAATTTCGTATCCTATGCTATGGAGTATGGACTATGCAATAATAAGCTCGATCCATTAATTGGTTATTGTTAGCCCAATTTATTAATTGAACACCGGCCCACCGTACAGTTCTGTTTGCACATCTAGGTACTAGGAGAGTAGGAGACTAGGAGGGAGGGCGGCGTGTCCCATATCAGATATGTATTTACAAAAACATATCACCTCACTAAACGACAAAATAGAGCTAAGACAAGCATTAAAACAGGTGTTATTTTTCAAAGAACATATGCCATTTTTCAAAAACAGATGCTATTTTGGTAAAATTGATGCCATTTTTCAAAAACATGTGCCGTTTTTCAAAAACGGATGTCATTTTCCAAAAAGTTTGAGTTTGTCCTTTAGCGGTTGTCTTTAGCCTATTTTTTCGTTTAGTGGGGTGATAAGTTTTTGTAAAGCATATCTAAGATGGATTTATACTTCCTTGACTAGGAGGTGCTTCAAAGCAAAAGCATTGTCTTGTTAGTTGAACTTAGTAGGAAGGACCGCGTGTTCGATCCCCCGCAACAACAATTGGGAGGGACGAGAACCTATCTACCCAGAACTCGTCCCGAATTTAGATTAGCCTTAAGTGTGAACCGTTTGCTAACACACAAAAAAAATTTGTCTTGTTAGTTAATTACTTATTGTATGTACCTAAACTCCTAAAGATATAATGTGTACGCAGGGCGTATCCAATGGTGTTTTTGCTCATTTGAAAATTTTAAAATAAGCCAAAAAAATTGCTTATTTAGGTACAAAATTATTCGGAAAGGAGATAAATTTTGTAGTACTCAAGCTTATTGTTATGAAAAGTTCATGGAAAAAAAGGAATGATTATGGAATATGAAGGTGAAAATGATGGATTGGACTTAATTTGGAATTGTCAACGACGACATCCCTCTTGTAACGTATCTTGTTCATGTACTCTAGCTTTACCACAAATAATTTTTAAGGTGACTTGTTATTTAAAATAGAAAGCACACATCAACTGATTTAATGTAGTACAAGCAGCGTGTTAGATAAAAGCTCTATTCTTTTCACCATATTTCTACTTATTTCAGCAAAAATAAGTTCATAAAAGATATGTTTAGGAAAATAAGTGTTGGTCAACTATAATTAATAACTAAAATAATTTTTGATAAGTTCAGATATTTTCAGATAATTTCAAATAAGTTCAGATAAGATAAGTTCACAAAAAATATATGAAAATCATGTGAATAGAACGCACGCACCCTTAGTAAAGTAATCACAAAAAATATATGAAAATCATGTGAATAGAACGCACGCACCCTTAATAAAGTAATATTAAAGTATTTTTATTTTTATTTGGGAGCTAGCATGTTATTAGTACTTAACAAAGTGATCACAAATTGATGAATTCCAAAATTTCAGGAGTAAAGGTGAATGGATTTGCATGCAAGAACGCAGCAAACATAACAGCAGAAGACTTCTATTTTGCTGGACTATCCAAACCCGGTATGACAAACAACACCATGGGAGCCCTAGTAACCGGAGCCAACGTTGAAAAGATACCGGGCCTTAACACACTCGGAGTATCCATGGGCCGTATTGACTTCGCCCCGGGTGGGCTTAACCCTCCCCACACACATCCACGGGCCACGGAAATGGTCTTTGTATTGTACGGAGAATTGGACGTGGGTTTCATAACAACTTCAAACAAGCTCATTTCTAAACACATTAAAGTTGGTGAAACCTTTGTTTTTCCAAGAGGGTTAGTCCATTTTCAGAAGAATAATGGTAAGATACCAGCAGCTGTAGTTACTGCCTTTAACAGTCAGTTGCCCGGGACCCAATCGATCGCCGCCACGTTGTTTGCCTCGACCCCACCTGTGCCAGATCATGTTTTAACTATGGCTTTCCAAGTTGGGACTAAGCAAGTACAGAAGATTAGGGCTAAACTTGCCCCTAAGAAGTAATTAATAAATAATTAGCATTTTATAATATTTTTGTGTGGTTCGGGTTATGGTTATTCAATCATGTGTATGTACTGACTAATAAAAAGGAGAACTGAATTTGGCACACCAAAAAGTGATTGACACTCACTGTGAGAGCATAGTTTTTCGGCTCTAATCACATAGTGGTGTGCCTAAAATCAGTATTCAATAAAAAGGTTTTTAATTCTTATATATGGTTATCATGATCAAGTTTCTAATACAGTGTTGAATAAGAAATTGGAAATTAATTGCACTAGAGGAAAAAACATCATAAGTTGCCCTTAAAATATGCTTATAAGTTGCCCTTCATAAGTGCCACCTATGGG GGATGTGGACAAGTCTTGCGGTTGATGCATCAATAATCAATCTTCCCACCCACCGAAAATAACACGCGCGGAGTACTTTCTATTTGTACTCCAAGTTTTCCCCATTTTTCCAAGTAACACTCGATCTCATTTTCTCTCTCTAAATTATCGGCCATTAATTATGATGATAATGAGGGACATTGCTGCTGCATTCCTGGTGGTGTTCTTGGCTGTGGCAACCCCTGTTTTCGCCAATGATCCTGATATGCTCCAAGATGTTTGTGTTGCTGATTCTACATCTGGAGTAAAGGTGAATGGATTTGCATGCAAGAACGCAGCAAACATAACAGCAGAAGACTTCTATTTTGCTGGACTATCCAAACCCGGTATGACAAACAACACCATGGGAGCCCTAGTAACCGGAGCCAACGTTGAAAAGATACCGGGCCTTAACACACTCGGAGTATCCATGGGCCGTATTGACTTCGCCCCGGGTGGGCTTAACCCTCCCCACACACATCCACGGGCCACGGAAATGGTCTTTGTATTGTACGGAGAATTGGACGTGGGTTTCATAACAACTTCAAACAAGCTCATTTCTAAACACATTAAAGTTGGTGAAACCTTTGTTTTTCCAAGAGGGTTAGTCCATTTTCAGAAGAATAATGGTAAGATACCAGCAGCTGTAGTTACTGCCTTTAACAGTCAGTTGCCCGGGACCCAATCGATCGCCGCCACGTTGTTTGCCTCGACCCCACCTGTGCCAGATCATGTTTTAACTATGGCTTTCCAAGTTGGGACTAAGCAAGTACAGAAGATTAGGGCTAAACTTGCCCCTAAGAAGTAATTAATAAATAATTAGCATTTTATAATATTTTTGTGTGGTTCGGGTTATGGTTATTCAATCATGTGTATGTACTGACTAATAAAAAGGAGAACTGAATTTGGCACACCAAAAAGTGATTGACACTCACTGTGAGAGCATAGTTTTTCGGCTCTAATCACATAGTGGTGTGCCTAAAATCAGTATTCAATAAAAAGGTTTTTAATTCTTATATATGGTTATCATGATCAAGTTTCTAATACAGTGTTGAATAAGAAATTGGAAATTAATTGCACTAGAGGAAAAAACATCATAAGTTGCCCTTAAAATATGCTTATAAGTTGCCCTTCATAAGTGCCACCTATGGG ATGATGATAATGAGGGACATTGCTGCTGCATTCCTGGTGGTGTTCTTGGCTGTGGCAACCCCTGTTTTCGCCAATGATCCTGATATGCTCCAAGATGTTTGTGTTGCTGATTCTACATCTGGAGTAAAGGTGAATGGATTTGCATGCAAGAACGCAGCAAACATAACAGCAGAAGACTTCTATTTTGCTGGACTATCCAAACCCGGTATGACAAACAACACCATGGGAGCCCTAGTAACCGGAGCCAACGTTGAAAAGATACCGGGCCTTAACACACTCGGAGTATCCATGGGCCGTATTGACTTCGCCCCGGGTGGGCTTAACCCTCCCCACACACATCCACGGGCCACGGAAATGGTCTTTGTATTGTACGGAGAATTGGACGTGGGTTTCATAACAACTTCAAACAAGCTCATTTCTAAACACATTAAAGTTGGTGAAACCTTTGTTTTTCCAAGAGGGTTAGTCCATTTTCAGAAGAATAATGGTAAGATACCAGCAGCTGTAGTTACTGCCTTTAACAGTCAGTTGCCCGGGACCCAATCGATCGCCGCCACGTTGTTTGCCTCGACCCCACCTGTGCCAGATCATGTTTTAACTATGGCTTTCCAAGTTGGGACTAAGCAAGTACAGAAGATTAGGGCTAAACTTGCCCCTAAGAAGTAA MMIMRDIAAAFLVVFLAVATPVFANDPDMLQDVCVADSTSGVKVNGFACKNAANITAEDFYFAGLSKPGMTNNTMGALVTGANVEKIPGLNTLGVSMGRIDFAPGGLNPPHTHPRATEMVFVLYGELDVGFITTSNKLISKHIKVGETFVFPRGLVHFQKNNGKIPAAVVTAFNSQLPGTQSIAATLFASTPPVPDHVLTMAFQVGTKQVQKIRAKLAPKK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14475.1 vs. NCBI nr
Match: gi|902207442|gb|KNA15705.1| (hypothetical protein SOVF_095730 [Spinacia oleracea]) HSP 1 Score: 436.0 bits (1120), Expect = 3.800e-119 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1
BLAST of Spo14475.1 vs. NCBI nr
Match: gi|731337309|ref|XP_010679717.1| (PREDICTED: germin-like protein 5-1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 382.1 bits (980), Expect = 6.600e-103 Identity = 188/214 (87.85%), Postives = 202/214 (94.39%), Query Frame = 1
BLAST of Spo14475.1 vs. NCBI nr
Match: gi|526118000|ref|NP_001267914.1| (germin-like protein 2 precursor [Vitis vinifera]) HSP 1 Score: 338.2 bits (866), Expect = 1.100e-89 Identity = 165/212 (77.83%), Postives = 192/212 (90.57%), Query Frame = 1
BLAST of Spo14475.1 vs. NCBI nr
Match: gi|255543062|ref|XP_002512594.1| (PREDICTED: germin-like protein 5-1 [Ricinus communis]) HSP 1 Score: 327.4 bits (838), Expect = 1.900e-86 Identity = 166/218 (76.15%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Spo14475.1 vs. NCBI nr
Match: gi|672160997|ref|XP_008800295.1| (PREDICTED: germin-like protein 5-1 [Phoenix dactylifera]) HSP 1 Score: 327.0 bits (837), Expect = 2.500e-86 Identity = 161/210 (76.67%), Postives = 182/210 (86.67%), Query Frame = 1
BLAST of Spo14475.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R898_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_095730 PE=3 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 2.700e-119 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1
BLAST of Spo14475.1 vs. UniProtKB/TrEMBL
Match: Q0MYQ7_VITVI (Germin-like protein 2 OS=Vitis vinifera GN=VIT_14s0060g00120 PE=2 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 7.600e-90 Identity = 165/212 (77.83%), Postives = 192/212 (90.57%), Query Frame = 1
BLAST of Spo14475.1 vs. UniProtKB/TrEMBL
Match: B9RFS5_RICCO (Rhicadhesin receptor, putative OS=Ricinus communis GN=RCOM_1437110 PE=3 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.300e-86 Identity = 166/218 (76.15%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Spo14475.1 vs. UniProtKB/TrEMBL
Match: A9PF73_POPTR (Rhicadhesin receptor family protein OS=Populus trichocarpa GN=POPTR_0005s00310g PE=2 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.100e-85 Identity = 161/214 (75.23%), Postives = 188/214 (87.85%), Query Frame = 1
BLAST of Spo14475.1 vs. UniProtKB/TrEMBL
Match: V4TC38_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022159mg PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.500e-85 Identity = 156/216 (72.22%), Postives = 193/216 (89.35%), Query Frame = 1
BLAST of Spo14475.1 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 8.900e-84 Identity = 148/212 (69.81%), Postives = 178/212 (83.96%), Query Frame = 1
BLAST of Spo14475.1 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 4.400e-83 Identity = 155/214 (72.43%), Postives = 180/214 (84.11%), Query Frame = 1
BLAST of Spo14475.1 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2) HSP 1 Score: 302.8 bits (774), Expect = 3.200e-81 Identity = 152/215 (70.70%), Postives = 176/215 (81.86%), Query Frame = 1
BLAST of Spo14475.1 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 6.600e-79 Identity = 143/219 (65.30%), Postives = 175/219 (79.91%), Query Frame = 1
BLAST of Spo14475.1 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=2) HSP 1 Score: 295.0 bits (754), Expect = 6.600e-79 Identity = 143/219 (65.30%), Postives = 175/219 (79.91%), Query Frame = 1
BLAST of Spo14475.1 vs. TAIR (Arabidopsis)
Match: AT3G62020.1 (germin-like protein 10) HSP 1 Score: 311.2 bits (796), Expect = 5.000e-85 Identity = 148/212 (69.81%), Postives = 178/212 (83.96%), Query Frame = 1
BLAST of Spo14475.1 vs. TAIR (Arabidopsis)
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor) HSP 1 Score: 295.0 bits (754), Expect = 3.700e-80 Identity = 143/219 (65.30%), Postives = 175/219 (79.91%), Query Frame = 1
BLAST of Spo14475.1 vs. TAIR (Arabidopsis)
Match: AT1G09560.1 (germin-like protein 5) HSP 1 Score: 295.0 bits (754), Expect = 3.700e-80 Identity = 143/219 (65.30%), Postives = 175/219 (79.91%), Query Frame = 1
BLAST of Spo14475.1 vs. TAIR (Arabidopsis)
Match: AT3G05930.1 (germin-like protein 8) HSP 1 Score: 257.7 bits (657), Expect = 6.600e-69 Identity = 123/210 (58.57%), Postives = 158/210 (75.24%), Query Frame = 1
BLAST of Spo14475.1 vs. TAIR (Arabidopsis)
Match: AT5G26700.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 246.9 bits (629), Expect = 1.200e-65 Identity = 121/215 (56.28%), Postives = 162/215 (75.35%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14475.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14475.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14475.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo14475.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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