Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCCCACCTGTCATACCTAACGAAGAATGAGTAAAACACAAATAGCAAAATTACTAGATAATGATTAGTTCTCCAATTGGCAATTGGTCCAGAAACTTTCAATACCATTTCTAAACCACCAACTTTTTTCCTTGTTTCCCGGCAATGGCGTCACCACAAAACCATCGCACCCTCTCCCTCCTCCTCCTTATCTCTCTCCTCTCCTTCACACCTTCTCAATCTCTCTCCCCGGAAAACCACCTTCTCCTTCCCAGCAATCGCAAACTCGGCAAAGATGATCAACTCTTCTGTGAGAGCTGGCGGTTTTCTGTCGAAACTAACGACGCCGGGATATGGTCTACCATCCCTTCTCGCTGCTTTGACTTCGTGAAAAACTACATTACTGGAGATCACTACTTATTAGACTCCAAAATCGTCGCTGAAGACGAGTTGGAATTCGCGAAATCCGTCAATGTTTCCGGCGACGGAAAAGACGCTTGGGTTTTCGATGTTGATGAAACTCTTCTCTTCAATATACCTTACTATGAAACTCATGGATATGGGTGAGTTTTTCTTCATTGAATAAATTTATCATTGTTTTGGGTTTTAAAGATCTTAGTTTTTAAATAATTGGAGATTGGCATATAATGATTTGATGATTATTGATGTTTATTTATCATAAAGAATTTAAGGAAGATATCTAAGAAATATTTTGTCAAGAGTTTTTTATGTGATTCATTATAGATATGCTGCTGACTTGTTGAGTATTTTGAGATAATTGATGTTTTTAATATGGAGTACAAAATTTGATGTTTGATTATAGCCCAATTGGATTTAGTTTTTACCTGCGTATGGAAAATTGGATGCAACTTTTGGATCAATGTTGATCTTTAGTTTGGTGAAGTTACCTAATAGATTAGACTGGACTAAGTTACCTAATAGATTAGACTGGACTAAGTTACCTAATAGACTGGACTAAATTAAGCTGATTCTGTAGAACCAAATGCTGGAAATGGAACTTGGGAAGTTCCTTGTGTTCTATTAAAAGTTCGTGATCAGATGTTTGATTTGGTGGCTGATCCATTTTTCGAGGAGGTCATGGTCGGAAGTTCTTTATTGTTATAATGTTATGATCAATGTATTCTTGCCTTCTTTCTTTTATTTTTTTTTATTTGTTTTGCTAATGCGTACCTTAAAAGGAAGGTTAAATATTGATAGTCATGTGACCCATGTGAATGTTCTGAACTTGTTTGTGTTGATCCTTTAGTTGCAAGGAAGGTTAGACTTGGAATTAAATTTATTTATGCTGCAGGTTGTTAAGTGGTTTCTTTATGAGGATCGATTATTAGTTAAAAATTGAGGCTGTCTAATGTTGAAATGTTGTGATATGTTATGCAAGGTTGTGTCAGTTTTCAGTTATAGGATCTGTATGAGCTTGTTTCGTTTCAACTAGAGTGAACAATGAAAAAAATTTATAGTTTTCCCTGTTGATAAGTATGGAAGACTGCTGTGTTAGTGATGTGTGACATTTTGGTGAGGCTGATTTAGGATTGAAAATGATGAACAAGCTACATTTTGATTTTGAAAATGGTTATACACCATTTCAGATTTTCATTAACGCTAAAGAGTTCGAAAAGCTATCGCTTATGCAATGTTTTTTGATGGATTGGCTTGTAGAGTTGTAATATACCCTATTGCTGTTGGTGATTAATGTTTTAATAATTTTCTCTCTTAAAGAGCAAAGAGTAAAATGAAGCCTGTGCTAGCAGTGTAAATGATATCTATCATTAGTCATTAGACTCATTAACAATGGCAGTGGATGTGTGTTTCTTTATCGGACACATTTAATTGGCTAGGAATTGAAGCGTGCATATAGTGGTTTCATAATTTGCTTCTCTTCTGAGAAGTGAAGTCGCAATTTTTTCTTTTCAAGCATTGGAAACTGAAACTATGACTTCTGGTTTCGTTTGCGAAGTGTGATGCTTGTTTCCTGTTCTTGTCAAATCACTGATTTCCCCAGAAATTAATTCCTCTTTGTTCCAACATATAATGGTCAAGTGATCCATGCGTTCGTTAATTTGTTTATGTTGATTCTTGGTGGTTAAGTGAAAACTTCATGTGGATAGATTATAAAGTTAAGGCTTTCCTGTACTCCTATATTCAAATGGGGTGATATTGTAATGCAAGGTTGTGTCATTTTTATTTTATAAAACTTATATGAGCTTGTTTGATTTAGAGCCGATTATGATTAGTATTTCTAGTTTCCCCTGTTGATAGTTGTGGAAGATTGCTGTATCGTGATGTTTTGGTGAGGTTATGCAGAACTTTGCAAACAATAAAAAAAATTGCATTTAGAAAGGTGATTATACACAATTTTAGCAACCCATTTACTCTATAGAGCTTGTAAAGCCATCAATTTTTCTGACTGTTATTTAGCTATGTAGTGAACGATATTTCTGTCTCTTAATTGGCGTAAAATGAACTGTGCAATAATGATAAGATAATTTCCCTCTATGGGTACATCAGCAACGGCACGGCACGTGGATATATTTTTATTTAAGGCAGACATGTTATTGACTAAAAACTAAGGCTTGCAGAGGAGTAATGCTTCTCTTTCGTTTGGTAAAGATTTATGTTCTTCTGCTCTAAATTGTTGGGAAAATAAAACTCTAACTTCTGGTTTCGTTTGCAAAGCATCATTCTTGCTTCCTGTTTTCCACACCACTGATCTCCCCTGAAATATGTGTTTAGGGAAACTAGAATTCTCACTTCTGTTTGCTGCTATCTGATGTCAGTTGTGCATCCTACATTCCTACTCCATCTGTTTTCTTTTGCCATTTTTGGGTTCCTGAGGAATGCTAAAATTCTTTCCCTCTGTTTCGTATTGGGAACACATTCCTCTGTATCTCAACAACTTATGGTCCTATTATTGTTCAATGGCACAGGATATTTACTTACCAAAATTCATTTAAGCACAAAAAAGTCTCGGTAAACAGAATTACGCTTGTTTCTGCTGCAAACTAGCTATTCTGCTGCAGGTTATAACCAATTTGTTTCTTGCTTGTCCTTGTCATTGCTGATCTTGTTATCACATTGATTCTGATCTTATTATCAAATTTTCATGCTAGTATGCTACTGGTTTGGACAATTCAATCAGTGTTGTTTTCTGTTGCTCTTTGAAGAAACACATTAATTCTGATTTTCATATCCAAATGTTATTGGCAGTGGTGTTGATGGAGTAGATTCCCTTGGGAGACAGGAATTTCTTCTGGATAGTTATTTTATTTATTGATGTTGCTGATGATTAAGAACTGATGTTTTGTTCTGATTATCAACGGTCCCACTGTTCCTCATTATATACTCATATCAGTATATAGGAATGGTGTGAATATATGCATAAGGTGACAATAACTTAGATGATCAAATTTGCCAGCTCTAGCTGTTCGATACTTAATTCTTTCTATTCTTGCTCCCTTGCCTTGGCCTAAGTCTATGCTTACATTTCTGGTGCTTAGATCAGAGATCTTTAATGAAGAGTCTTTTGATGAGTATATGCTGCTTGGGAAATCACCTCCTTTGTCAGCAAGTTTGAGCTTGTACCAAGAGCTCCAGCGGCTCGGGTTCACAATATTTATCCTGACTGGCAGGAGTGAGCCCTTTAGAAATGCTACTGAGGCAAATCTACGGCTAGCAGGCTACAATAACTGGGAAAGATTGATCTTAAGGTATGTTTTACATTTTAATAACAATACTTGTAGGTTCTGATTATCTTGTATCCCTAATTTGGTCCATTATAATTTCTCGGTTTGGTGTATGTAATGAAATAATAGGGGACCTTCTGATAAAAGCAAATTGGCTGTTGAGTACAAGTCGGAGAAGAGAAAGGAGTTGGTAGATGAGGGTTACAGGATTCGTGGCAACTCGGGAGATCAATGGAGTGACCTGCTGGGGTATGCAATTGCACAGAGATCTTTTAAGCTCCCTAATCCAATGTATTATATTGCTTGATACTGTATTATTGCATCTCCATATTGCTGCATCCTGTATTTATCATCAGAAAAATGAATTATTTGAACTATCTTGTTACAGAAATTAAAGTTTGTCCATTTCTAATTCTCAATGAAGAACCATTTGGCAATTAATTAAAAATATTGAAAATCGATTTTTCTACAACCAGTCAGTATAATGAATCTCTATCATGAGGGTGTCTTAAAAATGTT GCCCCACCTGTCATACCTAACGAAGAATGAGTAAAACACAAATAGCAAAATTACTAGATAATGATTAGTTCTCCAATTGGCAATTGGTCCAGAAACTTTCAATACCATTTCTAAACCACCAACTTTTTTCCTTGTTTCCCGGCAATGGCGTCACCACAAAACCATCGCACCCTCTCCCTCCTCCTCCTTATCTCTCTCCTCTCCTTCACACCTTCTCAATCTCTCTCCCCGGAAAACCACCTTCTCCTTCCCAGCAATCGCAAACTCGGCAAAGATGATCAACTCTTCTGTGAGAGCTGGCGGTTTTCTGTCGAAACTAACGACGCCGGGATATGGTCTACCATCCCTTCTCGCTGCTTTGACTTCGTGAAAAACTACATTACTGGAGATCACTACTTATTAGACTCCAAAATCGTCGCTGAAGACGAGTTGGAATTCGCGAAATCCGTCAATGTTTCCGGCGACGGAAAAGACGCTTGGGTTTTCGATGTTGATGAAACTCTTCTCTTCAATATACCTTACTATGAAACTCATGGATATGGATCAGAGATCTTTAATGAAGAGTCTTTTGATGAGTATATGCTGCTTGGGAAATCACCTCCTTTGTCAGCAAGTTTGAGCTTGTACCAAGAGCTCCAGCGGCTCGGGTTCACAATATTTATCCTGACTGGCAGGAGTGAGCCCTTTAGAAATGCTACTGAGGCAAATCTACGGCTAGCAGGCTACAATAACTGGGAAAGATTGATCTTAAGGGGACCTTCTGATAAAAGCAAATTGGCTGTTGAGTACAAGTCGGAGAAGAGAAAGGAGTTGGTAGATGAGGGTTACAGGATTCGTGGCAACTCGGGAGATCAATGGAGTGACCTGCTGGGGTATGCAATTGCACAGAGATCTTTTAAGCTCCCTAATCCAATGTATTATATTGCTTGATACTGTATTATTGCATCTCCATATTGCTGCATCCTGTATTTATCATCAGAAAAATGAATTATTTGAACTATCTTGTTACAGAAATTAAAGTTTGTCCATTTCTAATTCTCAATGAAGAACCATTTGGCAATTAATTAAAAATATTGAAAATCGATTTTTCTACAACCAGTCAGTATAATGAATCTCTATCATGAGGGTGTCTTAAAAATGTT ATGGCGTCACCACAAAACCATCGCACCCTCTCCCTCCTCCTCCTTATCTCTCTCCTCTCCTTCACACCTTCTCAATCTCTCTCCCCGGAAAACCACCTTCTCCTTCCCAGCAATCGCAAACTCGGCAAAGATGATCAACTCTTCTGTGAGAGCTGGCGGTTTTCTGTCGAAACTAACGACGCCGGGATATGGTCTACCATCCCTTCTCGCTGCTTTGACTTCGTGAAAAACTACATTACTGGAGATCACTACTTATTAGACTCCAAAATCGTCGCTGAAGACGAGTTGGAATTCGCGAAATCCGTCAATGTTTCCGGCGACGGAAAAGACGCTTGGGTTTTCGATGTTGATGAAACTCTTCTCTTCAATATACCTTACTATGAAACTCATGGATATGGATCAGAGATCTTTAATGAAGAGTCTTTTGATGAGTATATGCTGCTTGGGAAATCACCTCCTTTGTCAGCAAGTTTGAGCTTGTACCAAGAGCTCCAGCGGCTCGGGTTCACAATATTTATCCTGACTGGCAGGAGTGAGCCCTTTAGAAATGCTACTGAGGCAAATCTACGGCTAGCAGGCTACAATAACTGGGAAAGATTGATCTTAAGGGGACCTTCTGATAAAAGCAAATTGGCTGTTGAGTACAAGTCGGAGAAGAGAAAGGAGTTGGTAGATGAGGGTTACAGGATTCGTGGCAACTCGGGAGATCAATGGAGTGACCTGCTGGGGTATGCAATTGCACAGAGATCTTTTAAGCTCCCTAATCCAATGTATTATATTGCTTGA MASPQNHRTLSLLLLISLLSFTPSQSLSPENHLLLPSNRKLGKDDQLFCESWRFSVETNDAGIWSTIPSRCFDFVKNYITGDHYLLDSKIVAEDELEFAKSVNVSGDGKDAWVFDVDETLLFNIPYYETHGYGSEIFNEESFDEYMLLGKSPPLSASLSLYQELQRLGFTIFILTGRSEPFRNATEANLRLAGYNNWERLILRGPSDKSKLAVEYKSEKRKELVDEGYRIRGNSGDQWSDLLGYAIAQRSFKLPNPMYYIA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14678.1 vs. NCBI nr
Match: gi|902227495|gb|KNA20723.1| (hypothetical protein SOVF_049830 [Spinacia oleracea]) HSP 1 Score: 532.7 bits (1371), Expect = 3.600e-148 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 1
BLAST of Spo14678.1 vs. NCBI nr
Match: gi|731354034|ref|XP_010688366.1| (PREDICTED: acid phosphatase 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 434.9 bits (1117), Expect = 1.000e-118 Identity = 211/261 (80.84%), Postives = 232/261 (88.89%), Query Frame = 1
BLAST of Spo14678.1 vs. NCBI nr
Match: gi|756179872|gb|AJK93571.1| (acid phosphatase [Suaeda glauca]) HSP 1 Score: 385.6 bits (989), Expect = 7.000e-104 Identity = 183/252 (72.62%), Postives = 215/252 (85.32%), Query Frame = 1
BLAST of Spo14678.1 vs. NCBI nr
Match: gi|694322961|ref|XP_009352576.1| (PREDICTED: acid phosphatase 1 [Pyrus x bretschneideri]) HSP 1 Score: 340.1 bits (871), Expect = 3.400e-90 Identity = 165/252 (65.48%), Postives = 199/252 (78.97%), Query Frame = 1
BLAST of Spo14678.1 vs. NCBI nr
Match: gi|720035637|ref|XP_010267101.1| (PREDICTED: acid phosphatase 1-like [Nelumbo nucifera]) HSP 1 Score: 336.7 bits (862), Expect = 3.700e-89 Identity = 153/227 (67.40%), Postives = 188/227 (82.82%), Query Frame = 1
BLAST of Spo14678.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RML3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_049830 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 2.500e-148 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 1
BLAST of Spo14678.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BTJ5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g197800 PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 7.000e-119 Identity = 211/261 (80.84%), Postives = 232/261 (88.89%), Query Frame = 1
BLAST of Spo14678.1 vs. UniProtKB/TrEMBL
Match: A0A0C5AWH0_9CARY (Suaeda glauca acid phosphatase mRNA OS=Suaeda glauca PE=2 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 4.900e-104 Identity = 183/252 (72.62%), Postives = 215/252 (85.32%), Query Frame = 1
BLAST of Spo14678.1 vs. UniProtKB/TrEMBL
Match: M5W340_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010268mg PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 2.200e-88 Identity = 165/261 (63.22%), Postives = 197/261 (75.48%), Query Frame = 1
BLAST of Spo14678.1 vs. UniProtKB/TrEMBL
Match: A0A067EL05_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024820mg PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 7.100e-87 Identity = 161/256 (62.89%), Postives = 201/256 (78.52%), Query Frame = 1
BLAST of Spo14678.1 vs. ExPASy Swiss-Prot
Match: PPA1_SOLLC (Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 7.300e-69 Identity = 118/216 (54.63%), Postives = 158/216 (73.15%), Query Frame = 1
BLAST of Spo14678.1 vs. ExPASy Swiss-Prot
Match: VSPA_SOYBN (Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.500e-48 Identity = 100/214 (46.73%), Postives = 135/214 (63.08%), Query Frame = 1
BLAST of Spo14678.1 vs. ExPASy Swiss-Prot
Match: VSPB_SOYBN (Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.900e-46 Identity = 97/219 (44.29%), Postives = 135/219 (61.64%), Query Frame = 1
BLAST of Spo14678.1 vs. ExPASy Swiss-Prot
Match: S25K_SOYBN (Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2 SV=2) HSP 1 Score: 186.4 bits (472), Expect = 3.900e-46 Identity = 97/210 (46.19%), Postives = 131/210 (62.38%), Query Frame = 1
BLAST of Spo14678.1 vs. ExPASy Swiss-Prot
Match: VSP2_ARATH (Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=2 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 4.200e-40 Identity = 89/214 (41.59%), Postives = 130/214 (60.75%), Query Frame = 1
BLAST of Spo14678.1 vs. TAIR (Arabidopsis)
Match: AT4G29260.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 285.8 bits (730), Expect = 2.700e-77 Identity = 126/219 (57.53%), Postives = 162/219 (73.97%), Query Frame = 1
BLAST of Spo14678.1 vs. TAIR (Arabidopsis)
Match: AT4G29270.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 271.9 bits (694), Expect = 4.000e-73 Identity = 122/214 (57.01%), Postives = 160/214 (74.77%), Query Frame = 1
BLAST of Spo14678.1 vs. TAIR (Arabidopsis)
Match: AT5G51260.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 266.2 bits (679), Expect = 2.200e-71 Identity = 127/252 (50.40%), Postives = 174/252 (69.05%), Query Frame = 1
BLAST of Spo14678.1 vs. TAIR (Arabidopsis)
Match: AT4G25150.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 260.8 bits (665), Expect = 9.200e-70 Identity = 127/258 (49.22%), Postives = 173/258 (67.05%), Query Frame = 1
BLAST of Spo14678.1 vs. TAIR (Arabidopsis)
Match: AT2G38600.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 184.5 bits (467), Expect = 8.400e-47 Identity = 90/244 (36.89%), Postives = 136/244 (55.74%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14678.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14678.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14678.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo14678.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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