Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGCCCGGGTGAAAGCAAAAAGAAAAAGGTATGAAGTCGCTAAAGCGAAGATTTTGGAGAGAAGAAAAGTAGAAAGAGGGAAAGAAGTTTAGTGCTAGTTCTTGCTGATTTATTTATTTAGATTCTACATTGGATAAAGAATGAAAAAAAGAATCTAAATAAAGCTCAGGGGGGCGGGAGGCCCCACTACTTCTTCATTCAGGGGGGAGGAATCAATTTCCACTGGGCGAGAGGTACACCTAACTTACCTACCTACTCATCAATCACGGTATTCAGCTGACTTGCACTGATAGACCTTTATTGTATTAGAATTAGGCGCTCATCTTTTTACTGTTGTCAACTAATCTTTTCAATGTTCGATTTTGCTCTATGTTAGAACATTTCTGTGAATGCTATTCTGATCTAAGTGGTCTTATTCTGTGTCCCGTGCTAGGAAGCATTACTCTTCTTTTCATTCCAAATTCAAGAATACGATCGATACGATTGATTGGTCTGTGCGCTTCTCTTATTACTTTTTTGTATTCTCCTGTTCTTCGGATACAATTTGATCCTTCTACGGCCAAATCTCAATTTGTGGAAAGCCTTCGATGGCTTCCTTATGAAAACATCAATTTTTATTTGGGTATAGACGGTATCTCTTTATTCTTCGTGATATTGACCACATTTTTGATCCCTATTTGCATTTTAGTGGGTTGGTCTGGTATGAGAAGTTATGGGAAAGAGTATATTACAGCATCTCTAATTTTAGAATTTCTAATGATCGCCGTGTTCTGCATGCTGGATCTTCTACTATTCTATGTTCTTTTCGAAAGCGTGCCAATCCCTATGTTGTGCGGAGCTGAGCATCTTCTATTCGCTAGGATAAATCCTCTGCAGGGGCCTTGTGCAGTAAACCCCCTACGGGCGGTCGTCCGTCGTCGTAAAGTAGTCTCCGCGAAGCTTTCGGGAAGAGGGGTAGTCTTGTGTGTAAGCATAGCATTTCTGGTCGAACCCGCCCAACTTAACTAA ATGAAAAGCCCGGGTGAAAGCAAAAAGAAAAAGATTCTACATTGGATAAAGAATGAAAAAAAGAATCTAAATAAAGCTCAGGGGGGCGGGAGGCCCCACTACTTCTTCATTCAGGGGGGAGGAATCAATTTCCACTGGGCGAGAGTGGGTTGGTCTGGTATGAGAAGTTATGGGAAAGAGTATATTACAGCATCTCTAATTTTAGAATTTCTAATGATCGCCGTGTTCTGCATGCTGGATCTTCTACTATTCTATGTTCTTTTCGAAAGCGTGCCAATCCCTATGTTGTGCGGAGCTGAGCATCTTCTATTCGCTAGGATAAATCCTCTGCAGGGGCCTTGTGCAGTAAACCCCCTACGGGCGGTCGTCCGTCGTCGTAAAGTAGTCTCCGCGAAGCTTTCGGGAAGAGGGGTAGTCTTGTGTGTAAGCATAGCATTTCTGGTCGAACCCGCCCAACTTAACTAA ATGAAAAGCCCGGGTGAAAGCAAAAAGAAAAAGATTCTACATTGGATAAAGAATGAAAAAAAGAATCTAAATAAAGCTCAGGGGGGCGGGAGGCCCCACTACTTCTTCATTCAGGGGGGAGGAATCAATTTCCACTGGGCGAGAGTGGGTTGGTCTGGTATGAGAAGTTATGGGAAAGAGTATATTACAGCATCTCTAATTTTAGAATTTCTAATGATCGCCGTGTTCTGCATGCTGGATCTTCTACTATTCTATGTTCTTTTCGAAAGCGTGCCAATCCCTATGTTGTGCGGAGCTGAGCATCTTCTATTCGCTAGGATAAATCCTCTGCAGGGGCCTTGTGCAGTAAACCCCCTACGGGCGGTCGTCCGTCGTCGTAAAGTAGTCTCCGCGAAGCTTTCGGGAAGAGGGGTAGTCTTGTGTGTAAGCATAGCATTTCTGGTCGAACCCGCCCAACTTAACTAA MKSPGESKKKKILHWIKNEKKNLNKAQGGGRPHYFFIQGGGINFHWARVGWSGMRSYGKEYITASLILEFLMIAVFCMLDLLLFYVLFESVPIPMLCGAEHLLFARINPLQGPCAVNPLRAVVRRRKVVSAKLSGRGVVLCVSIAFLVEPAQLN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14816.1 vs. NCBI nr
Match: gi|323435103|ref|YP_004222321.1| (hypothetical protein BevumaM_p086 (mitochondrion) [Beta vulgaris subsp. maritima]) HSP 1 Score: 110.2 bits (274), Expect = 3.400e-21 Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 1
BLAST of Spo14816.1 vs. NCBI nr
Match: gi|586829798|gb|AHJ81038.1| (orf175 (mitochondrion) [Panax ginseng]) HSP 1 Score: 99.4 bits (246), Expect = 5.900e-18 Identity = 54/59 (91.53%), Postives = 54/59 (91.53%), Query Frame = 1
BLAST of Spo14816.1 vs. NCBI nr
Match: gi|992272480|gb|KXG32594.1| (hypothetical protein SORBI_003G173200 [Sorghum bicolor]) HSP 1 Score: 97.8 bits (242), Expect = 1.700e-17 Identity = 52/59 (88.14%), Postives = 53/59 (89.83%), Query Frame = 1
BLAST of Spo14816.1 vs. NCBI nr
Match: gi|944221342|gb|KQK85789.1| (hypothetical protein SETIT_020767mg, partial [Setaria italica]) HSP 1 Score: 97.8 bits (242), Expect = 1.700e-17 Identity = 52/59 (88.14%), Postives = 53/59 (89.83%), Query Frame = 1
BLAST of Spo14816.1 vs. NCBI nr
Match: gi|242053077|ref|XP_002455684.1| (hypothetical protein SORBIDRAFT_03g020225, partial [Sorghum bicolor]) HSP 1 Score: 97.8 bits (242), Expect = 1.700e-17 Identity = 52/59 (88.14%), Postives = 53/59 (89.83%), Query Frame = 1
BLAST of Spo14816.1 vs. UniProtKB/TrEMBL
Match: E6ZDW4_BETVM (Putative uncharacterized protein orf175 OS=Beta vulgaris subsp. maritima GN=orf175 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.300e-21 Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 1
BLAST of Spo14816.1 vs. UniProtKB/TrEMBL
Match: G2XLU3_BETMA (Uncharacterized protein OS=Beta macrocarpa GN=orf175 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.300e-21 Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 1
BLAST of Spo14816.1 vs. UniProtKB/TrEMBL
Match: A0A096XFA7_PANGI (Orf175 OS=Panax ginseng GN=orf175 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.100e-18 Identity = 54/59 (91.53%), Postives = 54/59 (91.53%), Query Frame = 1
BLAST of Spo14816.1 vs. UniProtKB/TrEMBL
Match: W5AVM2_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.200e-17 Identity = 52/59 (88.14%), Postives = 53/59 (89.83%), Query Frame = 1
BLAST of Spo14816.1 vs. UniProtKB/TrEMBL
Match: W5DTC0_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.200e-17 Identity = 52/59 (88.14%), Postives = 53/59 (89.83%), Query Frame = 1
BLAST of Spo14816.1 vs. ExPASy Swiss-Prot
Match: NU4M_WHEAT (NADH-ubiquinone oxidoreductase chain 4 OS=Triticum aestivum GN=ND4 PE=2 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 8.900e-14 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 1
BLAST of Spo14816.1 vs. ExPASy Swiss-Prot
Match: NU4M_BRACM (NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris GN=ND4 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.000e-13 Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 1
BLAST of Spo14816.1 vs. ExPASy Swiss-Prot
Match: NU4M_ARATH (NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana GN=ND4 PE=2 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 4.400e-13 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 1
BLAST of Spo14816.1 vs. ExPASy Swiss-Prot
Match: NU4M_MARPO (NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha GN=ND4 PE=3 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.800e-6 Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 1
BLAST of Spo14816.1 vs. ExPASy Swiss-Prot
Match: NU4M_PROWI (NADH-ubiquinone oxidoreductase chain 4 OS=Prototheca wickerhamii GN=ND4 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.100e-6 Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 1
BLAST of Spo14816.1 vs. TAIR (Arabidopsis)
Match: ATMG00580.1 (NADH dehydrogenase subunit 4) HSP 1 Score: 77.0 bits (188), Expect = 1.100e-14 Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14816.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14816.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14816.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo14816.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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