Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCATTTTATGCATCATTACTCATTACCTTACAATTCAGCCTCAGGTATTCAATTCTCAACCCCACAGACACTCTCTACTATCTCTTATTACAAACTGACTTGAGCAATGAAGAAGAATAGAAGATTTTTTAGGACCACCCCTTGTTCTCTCTTGTCCAGGCCCGTTATCACCTCGGACAGAGGAAAAGTTGTCTTATACGATGAGTTATCCCTTTTATTTCAAATTAATATTTTTACGCAGAAACAATAGTGATAACTATAAAAGATATTATGTTCTTAAAAATTATATTACATCCGTATTTATTTAGAAGATACACTTTGACCGATAATTAGTTTAGTTAGTTAAAGTTGTAGGAGATGGTATAGAACATGATTCTGTCTATATCATCATCATCATCCCCATGACTTTCTCTATTAAAAAAGTATCTTAATAGAAGAGAAAAAAGAGTTAAAGACGGGATAATTGAAGCACTTATTAGCGAAGAGAAAAAAAAAGTTAAATACGGGATAATTGAAGCACAAATTCTTTATTAACATAGATGTATAACAAATGTTGATAGACTGGTGTAAAGTTACCTAAAAATATTTAAAAGTTAGCTCGATATAAAGTACATGTCATTTATTTTCTAATAATAAAAAATGTAACTTTCAAAAGCACTCATGATGTATAACAGTAACTATATACTCGTTTTAAAATATTTATCCATCAAAAATTAATTAAAATATGTTAAAAATTACGGAGTACTAAAAGTTGATTAAAAATTACCCCAATATACAAATACCCAATTTTTTTTTAATCGGAAAGACAGAATTAGAAGGGGCAGCGCAGGATAAAGGAAATAGTTGATTAGCTGTCCAAATTGTCTGTCTCATAAAAGAACAAAGTAAAGTGGATTAATGATTTATTAATCCAAAACTTCCAACGTTCCCATTTTCAAAAACCAAATTGTAATGGAGCCAAATTTCTATTCTAAATCATCACTTTCTCGTGTCACTTTTACTCCCACCATCCCTTCCTCTTCACTCTTTCTACCTCTTTAATCTGCATTTTGATCAAATTCACATAGCAAATACAGAGCAGGAGAGTCAGAGCGAGCGACCGAGCAAGCTCGAGAATCCGAGAAAGGGGCAATGGGGTGGACGGTATTCGCATGTTTTGGTTGTCCAAACAAGAGAAAACGGCCTAAAACACCCTCAAAATTCGGCTCCAAGAACAGAAGAGTTAAGGAAGATCCTATCTCAGTTTCTCATACTCTTCTTCTTTACTTTCGGTTTTACTAAATTATTGATTTTAGTTTGTAGTTTATACTTGTGTTAATTTTTCTATTTGGTTCACAGAGAATTCGAGGATATGAACCGTTGCAGTCAGATATACCGAAAGAGCTGAATGAATCAACTCCCCTCGGCAGCCTAAGGTTGTTCCCTTTCTTTTTCTTCGAATACTGTCAGAAACTGAGAACTGCTGGTGAATTGTTGAGGAATAATGGGTTTGTTGTCACTGTAGAGAGAAGCAGAAAGATGAACCGAAAGCAAGGATCAGAAAGAAAGTGAGGTTTAATTTGGAGGTGGTAACTTATGAGCCATTAATCTCACAAGAAGATGAACATGATGATTACAACCGGGGAGAAAAAGGCGGCAAAGAAACCGATCAAGCAACAGTAGCAGTAGAAGGCTGCTTAATCTACACACCTCTCAGTAAAACTGTTTCAACTGAATCAAATTACAGATACAACAGTTGTTATGACGGTGAAGATGAATATGACGAGGATGAGGATGAATGTCAGATTACTGATGATGATGATGATGAAGATGAGGATGAAGATGAAGATTATGAAGATGATGATGATGATGATGATGGTTGCACAATCGATCCTCGGATAATTTACTACAACAAAGTAACAGACGAGCTTCGAGATTGCTCATCAGTACCTCTTGTCAGTTCTGCAACAAACGCGCGACTGAGGAGCCACTACATTGTACCAGTTCTGAACCCTATAGAGAACCTTTCCCAGTGGAAAACAGTCAAAACAAGGAAATGCTAGTTTTTGAGTCAAGTGTGTGCTGAAAACAAAGGAATGTAAGGAATGATGATTCCGTTTTTTTTGGTTTCTTAGTGTGAATTTTGTTTGTGTTGTGAATGTCAAAGTTTTACTAGTATCAGTATACATCCATTTTTTTCCCTATTTTGGCATGTTTGGAACTTACCCAGATGATGGGAACATCATTCACATCCCTCTTAACATGTGACCAGAGCAAAGACAAAAACCGAGTTAAAGCTACCAATGCTACATCTTTTGTAATAAGATCGACTTCTGAAGATAGTAAC ATGAATTCATTTTATGCATCATTACTCATTACCTTACAATTCAGCCTCAGAGCAGGAGAGTCAGAGCGAGCGACCGAGCAAGCTCGAGAATCCGAGAAAGGGGCAATGGGGTGGACGGTATTCGCATGTTTTGGTTGTCCAAACAAGAGAAAACGGCCTAAAACACCCTCAAAATTCGGCTCCAAGAACAGAAGAAGAATTCGAGGATATGAACCGTTGCAGTCAGATATACCGAAAGAGCTGAATGAATCAACTCCCCTCGGCAGCCTAAGAGAGAAGCAGAAAGATGAACCGAAAGCAAGGATCAGAAAGAAAGTGAGGTTTAATTTGGAGGTGGTAACTTATGAGCCATTAATCTCACAAGAAGATGAACATGATGATTACAACCGGGGAGAAAAAGGCGGCAAAGAAACCGATCAAGCAACAGTAGCAGTAGAAGGCTGCTTAATCTACACACCTCTCAGTAAAACTGTTTCAACTGAATCAAATTACAGATACAACAGTTGTTATGACGGTGAAGATGAATATGACGAGGATGAGGATGAATGTCAGATTACTGATGATGATGATGATGAAGATGAGGATGAAGATGAAGATTATGAAGATGATGATGATGATGATGATGGTTGCACAATCGATCCTCGGATAATTTACTACAACAAAGTAACAGACGAGCTTCGAGATTGCTCATCAGTACCTCTTGTCAGTTCTGCAACAAACGCGCGACTGAGGAGCCACTACATTGTACCAGTTCTGAACCCTATAGAGAACCTTTCCCAGTGGAAAACAGTCAAAACAAGGAAATGCTAGTTTTTGAGTCAAGTGTGTGCTGAAAACAAAGGAATGTAAGGAATGATGATTCCGTTTTTTTTGGTTTCTTAGTGTGAATTTTGTTTGTGTTGTGAATGTCAAAGTTTTACTAGTATCAGTATACATCCATTTTTTTCCCTATTTTGGCATGTTTGGAACTTACCCAGATGATGGGAACATCATTCACATCCCTCTTAACATGTGACCAGAGCAAAGACAAAAACCGAGTTAAAGCTACCAATGCTACATCTTTTGTAATAAGATCGACTTCTGAAGATAGTAAC ATGAATTCATTTTATGCATCATTACTCATTACCTTACAATTCAGCCTCAGAGCAGGAGAGTCAGAGCGAGCGACCGAGCAAGCTCGAGAATCCGAGAAAGGGGCAATGGGGTGGACGGTATTCGCATGTTTTGGTTGTCCAAACAAGAGAAAACGGCCTAAAACACCCTCAAAATTCGGCTCCAAGAACAGAAGAAGAATTCGAGGATATGAACCGTTGCAGTCAGATATACCGAAAGAGCTGAATGAATCAACTCCCCTCGGCAGCCTAAGAGAGAAGCAGAAAGATGAACCGAAAGCAAGGATCAGAAAGAAAGTGAGGTTTAATTTGGAGGTGGTAACTTATGAGCCATTAATCTCACAAGAAGATGAACATGATGATTACAACCGGGGAGAAAAAGGCGGCAAAGAAACCGATCAAGCAACAGTAGCAGTAGAAGGCTGCTTAATCTACACACCTCTCAGTAAAACTGTTTCAACTGAATCAAATTACAGATACAACAGTTGTTATGACGGTGAAGATGAATATGACGAGGATGAGGATGAATGTCAGATTACTGATGATGATGATGATGAAGATGAGGATGAAGATGAAGATTATGAAGATGATGATGATGATGATGATGGTTGCACAATCGATCCTCGGATAATTTACTACAACAAAGTAACAGACGAGCTTCGAGATTGCTCATCAGTACCTCTTGTCAGTTCTGCAACAAACGCGCGACTGAGGAGCCACTACATTGTACCAGTTCTGAACCCTATAGAGAACCTTTCCCAGTGGAAAACAGTCAAAACAAGGAAATGCTAG MNSFYASLLITLQFSLRAGESERATEQARESEKGAMGWTVFACFGCPNKRKRPKTPSKFGSKNRRRIRGYEPLQSDIPKELNESTPLGSLREKQKDEPKARIRKKVRFNLEVVTYEPLISQEDEHDDYNRGEKGGKETDQATVAVEGCLIYTPLSKTVSTESNYRYNSCYDGEDEYDEDEDECQITDDDDDEDEDEDEDYEDDDDDDDGCTIDPRIIYYNKVTDELRDCSSVPLVSSATNARLRSHYIVPVLNPIENLSQWKTVKTRKC Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14850.1 vs. NCBI nr
Match: gi|902164032|gb|KNA06918.1| (hypothetical protein SOVF_176680 [Spinacia oleracea]) HSP 1 Score: 250.8 bits (639), Expect = 2.800e-63 Identity = 125/140 (89.29%), Postives = 129/140 (92.14%), Query Frame = 1
BLAST of Spo14850.1 vs. NCBI nr
Match: gi|731320705|ref|XP_010670956.1| (PREDICTED: uncharacterized protein LOC104887886 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 245.4 bits (625), Expect = 1.200e-61 Identity = 156/244 (63.93%), Postives = 174/244 (71.31%), Query Frame = 1
BLAST of Spo14850.1 vs. NCBI nr
Match: gi|743896316|ref|XP_011041428.1| (PREDICTED: probable serine/threonine-protein kinase ifkB [Populus euphratica]) HSP 1 Score: 89.4 bits (220), Expect = 1.100e-14 Identity = 88/251 (35.06%), Postives = 124/251 (49.40%), Query Frame = 1
BLAST of Spo14850.1 vs. NCBI nr
Match: gi|802581761|ref|XP_012069895.1| (PREDICTED: DNA ligase 1 [Jatropha curcas]) HSP 1 Score: 87.8 bits (216), Expect = 3.100e-14 Identity = 88/249 (35.34%), Postives = 122/249 (49.00%), Query Frame = 1
BLAST of Spo14850.1 vs. NCBI nr
Match: gi|731389839|ref|XP_010650135.1| (PREDICTED: transcription initiation factor TFIID subunit 7-like [Vitis vinifera]) HSP 1 Score: 86.3 bits (212), Expect = 9.100e-14 Identity = 89/263 (33.84%), Postives = 129/263 (49.05%), Query Frame = 1
BLAST of Spo14850.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJP1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176680 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.900e-63 Identity = 125/140 (89.29%), Postives = 129/140 (92.14%), Query Frame = 1
BLAST of Spo14850.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSI2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g048400 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 8.100e-62 Identity = 156/244 (63.93%), Postives = 174/244 (71.31%), Query Frame = 1
BLAST of Spo14850.1 vs. UniProtKB/TrEMBL
Match: A0A067KW02_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02374 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.200e-14 Identity = 88/249 (35.34%), Postives = 122/249 (49.00%), Query Frame = 1
BLAST of Spo14850.1 vs. UniProtKB/TrEMBL
Match: D7SZM4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01720 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.300e-14 Identity = 89/263 (33.84%), Postives = 129/263 (49.05%), Query Frame = 1
BLAST of Spo14850.1 vs. UniProtKB/TrEMBL
Match: B9HSS7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s07780g PE=4 SV=2) HSP 1 Score: 81.3 bits (199), Expect = 2.000e-12 Identity = 85/249 (34.14%), Postives = 121/249 (48.59%), Query Frame = 1
BLAST of Spo14850.1 vs. TAIR (Arabidopsis)
Match: AT5G44040.1 (unknown protein) HSP 1 Score: 59.7 bits (143), Expect = 3.200e-9 Identity = 62/181 (34.25%), Postives = 99/181 (54.70%), Query Frame = 1
BLAST of Spo14850.1 vs. TAIR (Arabidopsis)
Match: AT2G33400.1 (unknown protein) HSP 1 Score: 56.6 bits (135), Expect = 2.700e-8 Identity = 70/238 (29.41%), Postives = 107/238 (44.96%), Query Frame = 1
BLAST of Spo14850.1 vs. TAIR (Arabidopsis)
Match: AT1G04030.1 (unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 8.700e-7 Identity = 70/244 (28.69%), Postives = 111/244 (45.49%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14850.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14850.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14850.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo14850.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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