Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGTTTTTCATTCATTCTTATCCTGGTAATCCTCACCATTTTAACAAAAACTTCCAAATCTGCCCCTGATTACACAACTCTTGTATACAAAGGCTGTTCAAGACAACCCTTATCAGATCCATCAGGAGCATACGCCCAATCTCTCTCCTCCCTCTTCACCTCCCTCCTTCAACAATCCTCAAGATCCAAATTCTTCAAAACCACCGCCGGTGGATCCCAGCAAGCTACAATCTCCGGACTGTACCAATGCAGAGGCGACCTGAGCAATGCCGACTGCTACAATTGCATCAGCAAACTCCCCCAATTAACCGACCAACTCTGCGGCAAGGTCACGGCGGCGCGAGTCCAATTACTCGGGTGTTACCTCCTCTACGAAGTTTCCGGGTTCACTCAAATTTCAGGGATGCAGATGCTGTACAAGGATTGCAGCCGCACTAACGTCGCCGGAGCCGGGTTCGAGATGAAGAGAGACAGTGCGCTTACGGTGATGGAGAACGGTGTCGCGAGTGGTGGCGCCGGCGGGTTTTACACCACGAATTATCAAGCTGTTTATGCTTTGGGACAGTGTCAAGGTGATTTGAGTAGTACTGATTGTAGTCAGTGTGTTAAATCTGCTGTTCAAAAGGCGCAAGTTGAATGTGGGAGTTCATTGTCTGGACAAGTTTATTTGCATAAGTGCTTCATTAGTTATAGCTATTATCCTAATGGTGTTCCTACTAAATCTTCTTCTTCGTCTTCTTTCTCCTCCAACGGTGGAATTTCTTCAGGTATGTTTTCGTTACTAGTTCAAGTTACACTACCTGCCCGCTTTTTACGTGTTTATTTGAGTGTTGTTTATTAAATTGACTAGGTATGTTACTATGTTAGCGTTATTAGTTCAAATTACATTATCTGACTTATGTGTATTAGGATATTGGTAGGACTTTTTTTTGTTAATAATTAAGAGTGTGGGAATTGTTTATGAAATTGACATGATGGACTAGGATATCATTGATTGGATCTTCATTCATTGATTAGTCTTTTTGTTGGGGTGGGCATTTCAAATCTTTACAAAAAATAAAAATAAAAATCCCTTGAATTTTGGGCTTTTTATTTTTTTGGGTTTCCCCTTTATATTTATTGCTTGGAGATATGGCATTCTAGTTTGATGAATTTGGGCTCTTTATTGCTAAGCTTTTTGTGCAAGTTATCCCTTTAACTTTATCTTTTTTCCCCTTCACTATTCAATTGGGATTGTGACTTTGAAATGTGGGCATGTGTAGATATTTTTGAGGATATTCGTCCCTAAACTCAAAACGTTACAACTAAAATGAAAAAAAAAGGAAGAATGGGGGAAGTATATGGGTATTATGAAAACTGATTTTAGCACATTTTATGTTGATTTTGACGCATCACTTTGTAAGTAGAACACGAAAATTGTATCTGACAATGGGTGTGCTAAAATGAATTCCTGAATGTTACCTTATTAGTCTTAACATAAGGCCCATTGGCCATAACGGACTATGAATACATATTACGGAGTAAATATATTCCGCAAAATGATATTAAAGCCGATAAATGAAACAAAATAATGCGTCGATCAGTGTTATTAAATGTTATGGATATTCACATTTTGGTGTAGGGTCGAATCCGGGGAAAACGGTTGCAATAATAGTAGGAGTGACAGCTGGGGTGGCATTCTTGATCATAATGGTACTCTTCATAAGAGGGTTGAAGAAGAAGGATGATGGTAATGTGAAACAAACTCTTTCAATTTGTTAGAAACGAACTACTTTCAATGTATTTTGTTTTGTATTTTACTATTATTGTTTAGGAACATCTTCATGTTCACGATTCCTCTTAAAACTAACATTATATTAGCTGTATTTTTTGTTATTTTATGCAGATTTTTGAGGAAAACAGCTGGTTTATCAAGGGAATTTCTTGTTTTTCTTAAAAGGTGGGAAGGAAAAACCAATTTTTTGTGAATTTTTCGGAAAGGATATGGAAGGGTATGAACAACAAGGCTATTTTTCATTTTGTTTGGTGGATTATTTACTAGGGCAAAAATTGTAAAACCCCTTTTTCTTTTCTTTTTTTAAATTTTTGTAGTCAGAAAAAGAAATGAATGATTCAGTATAAAATGGGAAGAACAAAGGTTCATTCAACCATTCAGGCATACTGAATGTTTTTTGTCATTGTCATTCAAGAATCAAGATGCCATTAAAAATTTAAGACAGTAGACATGGGATATTTTGTAAAGGTTTCTTCAATTCCCTGGCCCCCTTCTTTTTCTTCTCATCGACATGTGAGTGATGTGACTATTGTTATTTCTTTTATCTCCATCATGTGTTTGATTAATGTCGCACTTGTTCGTCTGTAAATAAGTATGTCACATTTTTATGGAGTATTTATATTTTATATACATATTACACATATATTGTTATGGAAATAGTGAGTAGTAAGTCGTTTTCTGTATCGAGTAGGAATGTAGGATGTCGTATGTTATTTAGCGATGGAGGGAGTATTATTCTTTCGACTTTATATTATGTAACTTGCATTTCATGTGACATAGAATTAAAATGTTTCTAAAATTAGAAAAATGTGAAAAAAGAAAGAAAAAAGGGACACATAACATCGTTGAATTTCACATCTTTAATGCTTTTGCTAAAGCTAATAGGTGCAATTCCTGTTGCTGTTAGTAGTTGGTAAGTTGGATTTCTCATTTGATAGTGCCTACTTCCTGTCATATCGCGCATTATCTCCG ATGGGTAGTTTTTCATTCATTCTTATCCTGGTAATCCTCACCATTTTAACAAAAACTTCCAAATCTGCCCCTGATTACACAACTCTTGTATACAAAGGCTGTTCAAGACAACCCTTATCAGATCCATCAGGAGCATACGCCCAATCTCTCTCCTCCCTCTTCACCTCCCTCCTTCAACAATCCTCAAGATCCAAATTCTTCAAAACCACCGCCGGTGGATCCCAGCAAGCTACAATCTCCGGACTGTACCAATGCAGAGGCGACCTGAGCAATGCCGACTGCTACAATTGCATCAGCAAACTCCCCCAATTAACCGACCAACTCTGCGGCAAGGTCACGGCGGCGCGAGTCCAATTACTCGGGTGTTACCTCCTCTACGAAGTTTCCGGGTTCACTCAAATTTCAGGGATGCAGATGCTGTACAAGGATTGCAGCCGCACTAACGTCGCCGGAGCCGGGTTCGAGATGAAGAGAGACAGTGCGCTTACGGTGATGGAGAACGGTGTCGCGAGTGGTGGCGCCGGCGGGTTTTACACCACGAATTATCAAGCTGTTTATGCTTTGGGACAGTGTCAAGGTGATTTGAGTAGTACTGATTGTAGTCAGTGTGTTAAATCTGCTGTTCAAAAGGCGCAAGTTGAATGTGGGAGTTCATTGTCTGGACAAGTTTATTTGCATAAGTGCTTCATTAGTTATAGCTATTATCCTAATGGTGTTCCTACTAAATCTTCTTCTTCGTCTTCTTTCTCCTCCAACGGTGGAATTTCTTCAGGGTCGAATCCGGGGAAAACGGTTGCAATAATAGTAGGAGTGACAGCTGGGGTGGCATTCTTGATCATAATGGTACTCTTCATAAGAGGGTTGAAGAAGAAGGATGATGATTTTTGAGGAAAACAGCTGGTTTATCAAGGGAATTTCTTGTTTTTCTTAAAAGGTGGGAAGGAAAAACCAATTTTTTGTGAATTTTTCGGAAAGGATATGGAAGGGTATGAACAACAAGGCTATTTTTCATTTTGTTTGGTGGATTATTTACTAGGGCAAAAATTGTAAAACCCCTTTTTCTTTTCTTTTTTTAAATTTTTGTAGTCAGAAAAAGAAATGAATGATTCAGTATAAAATGGGAAGAACAAAGGTTCATTCAACCATTCAGGCATACTGAATGTTTTTTGTCATTGTCATTCAAGAATCAAGATGCCATTAAAAATTTAAGACAGTAGACATGGGATATTTTGTAAAGGTTTCTTCAATTCCCTGGCCCCCTTCTTTTTCTTCTCATCGACATGTGAGTGATGTGACTATTGTTATTTCTTTTATCTCCATCATGTGTTTGATTAATGTCGCACTTGTTCGTCTGTAAATAAGTATGTCACATTTTTATGGAGTATTTATATTTTATATACATATTACACATATATTGTTATGGAAATAGTGAGTAGTAAGTCGTTTTCTGTATCGAGTAGGAATGTAGGATGTCGTATGTTATTTAGCGATGGAGGGAGTATTATTCTTTCGACTTTATATTATGTAACTTGCATTTCATGTGACATAGAATTAAAATGTTTCTAAAATTAGAAAAATGTGAAAAAAGAAAGAAAAAAGGGACACATAACATCGTTGAATTTCACATCTTTAATGCTTTTGCTAAAGCTAATAGGTGCAATTCCTGTTGCTGTTAGTAGTTGGTAAGTTGGATTTCTCATTTGATAGTGCCTACTTCCTGTCATATCGCGCATTATCTCCG ATGGGTAGTTTTTCATTCATTCTTATCCTGGTAATCCTCACCATTTTAACAAAAACTTCCAAATCTGCCCCTGATTACACAACTCTTGTATACAAAGGCTGTTCAAGACAACCCTTATCAGATCCATCAGGAGCATACGCCCAATCTCTCTCCTCCCTCTTCACCTCCCTCCTTCAACAATCCTCAAGATCCAAATTCTTCAAAACCACCGCCGGTGGATCCCAGCAAGCTACAATCTCCGGACTGTACCAATGCAGAGGCGACCTGAGCAATGCCGACTGCTACAATTGCATCAGCAAACTCCCCCAATTAACCGACCAACTCTGCGGCAAGGTCACGGCGGCGCGAGTCCAATTACTCGGGTGTTACCTCCTCTACGAAGTTTCCGGGTTCACTCAAATTTCAGGGATGCAGATGCTGTACAAGGATTGCAGCCGCACTAACGTCGCCGGAGCCGGGTTCGAGATGAAGAGAGACAGTGCGCTTACGGTGATGGAGAACGGTGTCGCGAGTGGTGGCGCCGGCGGGTTTTACACCACGAATTATCAAGCTGTTTATGCTTTGGGACAGTGTCAAGGTGATTTGAGTAGTACTGATTGTAGTCAGTGTGTTAAATCTGCTGTTCAAAAGGCGCAAGTTGAATGTGGGAGTTCATTGTCTGGACAAGTTTATTTGCATAAGTGCTTCATTAGTTATAGCTATTATCCTAATGGTGTTCCTACTAAATCTTCTTCTTCGTCTTCTTTCTCCTCCAACGGTGGAATTTCTTCAGGGTCGAATCCGGGGAAAACGGTTGCAATAATAGTAGGAGTGACAGCTGGGGTGGCATTCTTGATCATAATGGTACTCTTCATAAGAGGGTTGAAGAAGAAGGATGATGATTTTTGA MGSFSFILILVILTILTKTSKSAPDYTTLVYKGCSRQPLSDPSGAYAQSLSSLFTSLLQQSSRSKFFKTTAGGSQQATISGLYQCRGDLSNADCYNCISKLPQLTDQLCGKVTAARVQLLGCYLLYEVSGFTQISGMQMLYKDCSRTNVAGAGFEMKRDSALTVMENGVASGGAGGFYTTNYQAVYALGQCQGDLSSTDCSQCVKSAVQKAQVECGSSLSGQVYLHKCFISYSYYPNGVPTKSSSSSSFSSNGGISSGSNPGKTVAIIVGVTAGVAFLIIMVLFIRGLKKKDDDF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14858.1 vs. NCBI nr
Match: gi|902161193|gb|KNA06540.1| (hypothetical protein SOVF_180080 [Spinacia oleracea]) HSP 1 Score: 567.8 bits (1462), Expect = 1.100e-158 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1
BLAST of Spo14858.1 vs. NCBI nr
Match: gi|731320672|ref|XP_010670938.1| (PREDICTED: cysteine-rich repeat secretory protein 3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 469.2 bits (1206), Expect = 5.500e-129 Identity = 242/297 (81.48%), Postives = 271/297 (91.25%), Query Frame = 1
BLAST of Spo14858.1 vs. NCBI nr
Match: gi|747087388|ref|XP_011091235.1| (PREDICTED: cysteine-rich repeat secretory protein 3-like [Sesamum indicum]) HSP 1 Score: 389.8 bits (1000), Expect = 4.200e-105 Identity = 201/290 (69.31%), Postives = 243/290 (83.79%), Query Frame = 1
BLAST of Spo14858.1 vs. NCBI nr
Match: gi|470120908|ref|XP_004296529.1| (PREDICTED: cysteine-rich repeat secretory protein 3 isoform X1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 388.3 bits (996), Expect = 1.200e-104 Identity = 193/292 (66.10%), Postives = 239/292 (81.85%), Query Frame = 1
BLAST of Spo14858.1 vs. NCBI nr
Match: gi|659076035|ref|XP_008438465.1| (PREDICTED: cysteine-rich repeat secretory protein 3-like [Cucumis melo]) HSP 1 Score: 383.3 bits (983), Expect = 3.900e-103 Identity = 194/293 (66.21%), Postives = 242/293 (82.59%), Query Frame = 1
BLAST of Spo14858.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QH36_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_180080 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 7.900e-159 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1
BLAST of Spo14858.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSH3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g048260 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 3.800e-129 Identity = 242/297 (81.48%), Postives = 271/297 (91.25%), Query Frame = 1
BLAST of Spo14858.1 vs. UniProtKB/TrEMBL
Match: V7BHL9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G231300g PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.800e-102 Identity = 192/293 (65.53%), Postives = 242/293 (82.59%), Query Frame = 1
BLAST of Spo14858.1 vs. UniProtKB/TrEMBL
Match: I1NHZ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G200200 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 3.000e-102 Identity = 191/293 (65.19%), Postives = 240/293 (81.91%), Query Frame = 1
BLAST of Spo14858.1 vs. UniProtKB/TrEMBL
Match: B9HKT9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s17150g PE=4 SV=2) HSP 1 Score: 379.4 bits (973), Expect = 4.000e-102 Identity = 191/292 (65.41%), Postives = 238/292 (81.51%), Query Frame = 1
BLAST of Spo14858.1 vs. ExPASy Swiss-Prot
Match: CRRS3_ARATH (Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=1 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.600e-96 Identity = 185/307 (60.26%), Postives = 238/307 (77.52%), Query Frame = 1
BLAST of Spo14858.1 vs. ExPASy Swiss-Prot
Match: CRR11_ARATH (Cysteine-rich repeat secretory protein 11 OS=Arabidopsis thaliana GN=CRRSP11 PE=1 SV=2) HSP 1 Score: 354.0 bits (907), Expect = 1.600e-96 Identity = 173/294 (58.84%), Postives = 230/294 (78.23%), Query Frame = 1
BLAST of Spo14858.1 vs. ExPASy Swiss-Prot
Match: CRR56_ARATH (Cysteine-rich repeat secretory protein 56 OS=Arabidopsis thaliana GN=CRRSP56 PE=1 SV=2) HSP 1 Score: 245.4 bits (625), Expect = 8.000e-64 Identity = 127/279 (45.52%), Postives = 174/279 (62.37%), Query Frame = 1
BLAST of Spo14858.1 vs. ExPASy Swiss-Prot
Match: CRR39_ARATH (Cysteine-rich repeat secretory protein 39 OS=Arabidopsis thaliana GN=CRRSP39 PE=1 SV=2) HSP 1 Score: 164.5 bits (415), Expect = 1.800e-39 Identity = 109/317 (34.38%), Postives = 166/317 (52.37%), Query Frame = 1
BLAST of Spo14858.1 vs. ExPASy Swiss-Prot
Match: CRR60_ARATH (Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.200e-32 Identity = 99/295 (33.56%), Postives = 152/295 (51.53%), Query Frame = 1
BLAST of Spo14858.1 vs. TAIR (Arabidopsis)
Match: AT1G04520.1 (plasmodesmata-located protein 2) HSP 1 Score: 354.0 bits (907), Expect = 9.000e-98 Identity = 185/307 (60.26%), Postives = 238/307 (77.52%), Query Frame = 1
BLAST of Spo14858.1 vs. TAIR (Arabidopsis)
Match: AT2G33330.1 (plasmodesmata-located protein 3) HSP 1 Score: 354.0 bits (907), Expect = 9.000e-98 Identity = 173/294 (58.84%), Postives = 230/294 (78.23%), Query Frame = 1
BLAST of Spo14858.1 vs. TAIR (Arabidopsis)
Match: AT5G43980.1 (plasmodesmata-located protein 1) HSP 1 Score: 245.4 bits (625), Expect = 4.500e-65 Identity = 127/279 (45.52%), Postives = 174/279 (62.37%), Query Frame = 1
BLAST of Spo14858.1 vs. TAIR (Arabidopsis)
Match: AT3G04370.1 (plasmodesmata-located protein 4) HSP 1 Score: 164.5 bits (415), Expect = 1.000e-40 Identity = 109/317 (34.38%), Postives = 166/317 (52.37%), Query Frame = 1
BLAST of Spo14858.1 vs. TAIR (Arabidopsis)
Match: AT5G37660.2 (plasmodesmata-located protein 7) HSP 1 Score: 139.4 bits (350), Expect = 3.500e-33 Identity = 99/295 (33.56%), Postives = 152/295 (51.53%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14858.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo14858.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo14858.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo14858.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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