Spo14875 (gene)

Overview
NameSpo14875
Typegene
OrganismSpinacia oleracea (Spinach)
Description50S ribosomal protein L14, chloroplastic
LocationSuper_scaffold_65 : 1291118 .. 1294028 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGTAACTTGGTAGAAAATGGGGGTAAAAGAAGAAGAAAAGAATTAAAGAAGTTCAATTAACATTCCTTGAAAAAAAAAAAAAAATCAATTAATACTTTAGAAAAGATGACCTCAAAATAAAATTAAAAAAAAAAGGAAAAAAGAAAGGACATTTTGGGAATTACAGAAGCAGAACCATAGTGAGAATAAGGAGCCCCGAAACCCTAATTTGAGGGCCTGGTATATAAATTACCCTCAAAACCCTAATCGTTGTTTTTCTTTCCTCTATTCTCTGTTACCTTTCTTCTCCTGCGGCGAAAATGTCGAAGCGAGGTATTCATTCAATCTCAATCACTCTTTCGATGTTATTACTCTTATTTGCTTAATTAAACCATTCGAATCCCCAGATTTTCATTTATCTCTGTGATTAATTTAATTATGTATGCTGTTAGAAATGTTTAGATCAAATAAGCTATACAAAACAGCTTAAAATCATATCATTTTAATATGTTATTACAAATATTTGTGCTATGAACTGAGTAAATTGATCTGTGCTTCATTGTTTCGGCTCCATTTTGATTATTGCAAATGGGTTTTTTTAGAAATTGAAATCTCACCATGATTAATGTAGTTTTATTGTTCAGTTTCTGTATTTTGTACTTAAATTATACTTGTTCCGAGAGTTTAAAAGAAGATCAAAACTCAATGATTTGTGGGATCTATAGCATCGATTTACAAAGAAATGGAAATCTATCTTGGACATAATTTGCAGTTTATGTTTATTTGTAGTCGTTAATCCCGATGCTTTATTTATTTGGTTTGTTGGGAATTGTTAGTCAAGTTTTGTTGAATTTAGTTTAAGATTTTTGATTGATTCTGACCTGGAATTTTCAGGGCGTGGAGGAAGTGCTGGAAACAAGTTCAGGATGTCACTGGGTCTTCCAGTGGCAGCCGTGGTGAACTGTGCCGATAACACAGGAGCAAAGAACCTGTACATCATTTCCGTAAAGGGAATCAAGGGTAGGCTCAACAGGTTGCCATCAGCTTGTGCTGGTGACATGGTCATGGCTACTGTCAAGAAGGGAAAGCCTGATCTCCGTAAGAAGGTTATGCCGGCTGTTATTGTGAGGCAACGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTTGAAGGTTGTTATTTAATTCTATACTTCAATTTGCTTTCTGTGCTTGTTTATTAGTAGAATCTCCATTTTAGATTAACTCAGAAAATCTTATGCATATGTTATCCATACTTGGTTCTGCAATCGAAACAAAAGAGTTTGGTTTCCCTGTATTTCTAGTGAAACATGCAAAGTTAGTGTCTTAAGATCCCCTTTCCGTATGCTGGTTTCATTTGTCATCTTTATCATGTGTTGGCCTAGTATTAGTATTTTTACCGTAGTTGCTAATTTTCTGTATCTCTTCTTCGTGTTCAAAGTTTTCTAACCCTTAAATTGAGTCTTATAAGGGTTTAATGTCTATTATTTCTGCACTTTTAGTACTACCCTTATTGATGCTGGAACTAGGGATGCCAATAAATTTCTTGTAAATTTCGGTCCCTTTGTTGGGGTACCTATGCGGCTATGCCTACAATGGATAGAGGCAGATTTGCCTTTGTTATGCCTTGTTTCAGGGATTATTCTGCATTGACTATTGAGTTTCTTCCTTCAGTCTTGCCTTTAAGAAAATAGAATAGATCATTTCTTTTGTGTGCTTCTTAGCTTTTTTTAAAAGATACATGTGGCTTGCTGGTTCTACTCTTCTGTTTCTTATAATAGTCTTTTCCCCGTGTTCATATAGATTTTCTCATAATCACATGTTGGTCTCTGTTACAGATAATGCTGGAGTTATTGTCAATCCCAAGGGTGAAATGAAAGGTAAGTGACAGCTGTTGTGATTAGTCATCTTTCTCTCCATGCACTTCTTTGCAAACTTGATTTTGAACCAAACATAATGATCTATAGAATTGAACATCTCAAAATTCACATTTGTCATGTCTGTCCACTTTCATGTGTGTATTCAAACTTTTGTGTTCTGTGACTTCTGTTCTTGATAAAATGATGGACTTTCCTCTGATGTTTTGGACTGGCCTCTGGTAGTTAGCTGTTGTTTGGATGCAAAACTTGACATCTTCCATTGTTATTAATCTCTATTGGATGGGTCTTTCACCTCCATGGCAGTGTTCTGCATTCCAACTAGAACCATTAAATATCTAGAACATAAACTATGGCGAAAAGTGTTTTTGATGTCACAAATTCGGCAATATGTCTTCCCTGCATTTGTGTCATGGACTCATGGGTGTAATAAGCTTGATTGAATTTGTCAATAAGCTAATTTAGTTTTTACCAATTTATAGTTCTTGACAAAGTTTGGTTTTTGTTTCAGGATCTGCTATCACCGGTCCCATTGCAAAGGAGTGTGCTGACTTATGGCCAAGGATTGCCAGTGCTGCCAATGCCATTGTCTAGAGATTGTCAGTTCAGATTTCAGTTCAGATAATCAGTTCAGAAGTTTGTTAAATTTTGGTTTGCTATAGTTGGTTTGCTATAGTTCAAATGTTTGTAGTTGGACAAAGGAACAATGCGTTCGCATATGTGAATTCAGCTTATGATTAGATCTTAAATACTCAGTACTTCGTTTTTGATTCTGATTGTCTTGTGAAATGACCATGTTTATGTTTTATTCTGATTTCCTGCAGTAATATTTATCCAAATTTTGTTCTGTGTTATTTTAAACATACGAAAACTATGGAAATACATGTTCACAAAGCTTCGTTTTTCAACCACAGTAATGTATTGCGAATTCTACAAACACCACATGAAGATAAACAGCTAATTTATTGAGTACATTGTATTACGGATTCCTTCAGCTGTGATGATAGAAGCCAACGGAATTAAGGG

mRNA sequence

TCCGTAACTTGGTAGAAAATGGGGGTAAAAGAAGAAGAAAAGAATTAAAGAAGTTCAATTAACATTCCTTGAAAAAAAAAAAAAAATCAATTAATACTTTAGAAAAGATGACCTCAAAATAAAATTAAAAAAAAAAGGAAAAAAGAAAGGACATTTTGGGAATTACAGAAGCAGAACCATAGTGAGAATAAGGAGCCCCGAAACCCTAATTTGAGGGCCTGGTATATAAATTACCCTCAAAACCCTAATCGTTGTTTTTCTTTCCTCTATTCTCTGTTACCTTTCTTCTCCTGCGGCGAAAATGTCGAAGCGAGGGCGTGGAGGAAGTGCTGGAAACAAGTTCAGGATGTCACTGGGTCTTCCAGTGGCAGCCGTGGTGAACTGTGCCGATAACACAGGAGCAAAGAACCTGTACATCATTTCCGTAAAGGGAATCAAGGGTAGGCTCAACAGGTTGCCATCAGCTTGTGCTGGTGACATGGTCATGGCTACTGTCAAGAAGGGAAAGCCTGATCTCCGTAAGAAGGTTATGCCGGCTGTTATTGTGAGGCAACGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTTGAAGATAATGCTGGAGTTATTGTCAATCCCAAGGGTGAAATGAAAGGATCTGCTATCACCGGTCCCATTGCAAAGGAGTGTGCTGACTTATGGCCAAGGATTGCCAGTGCTGCCAATGCCATTGTCTAGAGATTGTCAGTTCAGATTTCAGTTCAGATAATCAGTTCAGAAGTTTGTTAAATTTTGGTTTGCTATAGTTGGTTTGCTATAGTTCAAATGTTTGTAGTTGGACAAAGGAACAATGCGTTCGCATATGTGAATTCAGCTTATGATTAGATCTTAAATACTCAGTACTTCGTTTTTGATTCTGATTGTCTTGTGAAATGACCATGTTTATGTTTTATTCTGATTTCCTGCAGTAATATTTATCCAAATTTTGTTCTGTGTTATTTTAAACATACGAAAACTATGGAAATACATGTTCACAAAGCTTCGTTTTTCAACCACAGTAATGTATTGCGAATTCTACAAACACCACATGAAGATAAACAGCTAATTTATTGAGTACATTGTATTACGGATTCCTTCAGCTGTGATGATAGAAGCCAACGGAATTAAGGG

Coding sequence (CDS)

ATGTCGAAGCGAGGGCGTGGAGGAAGTGCTGGAAACAAGTTCAGGATGTCACTGGGTCTTCCAGTGGCAGCCGTGGTGAACTGTGCCGATAACACAGGAGCAAAGAACCTGTACATCATTTCCGTAAAGGGAATCAAGGGTAGGCTCAACAGGTTGCCATCAGCTTGTGCTGGTGACATGGTCATGGCTACTGTCAAGAAGGGAAAGCCTGATCTCCGTAAGAAGGTTATGCCGGCTGTTATTGTGAGGCAACGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTTGAAGATAATGCTGGAGTTATTGTCAATCCCAAGGGTGAAATGAAAGGATCTGCTATCACCGGTCCCATTGCAAAGGAGTGTGCTGACTTATGGCCAAGGATTGCCAGTGCTGCCAATGCCATTGTCTAG

Protein sequence

MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIAKECADLWPRIASAANAIV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14875.1Spo14875.1mRNA


Homology
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|902165843|gb|KNA07164.1| (hypothetical protein SOVF_174280 [Spinacia oleracea])

HSP 1 Score: 282.0 bits (720), Expect = 5.900e-73
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           IAKECADLWPRIASAANAIV
Sbjct: 121 IAKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|922340291|ref|XP_003625359.2| (60S ribosomal L23-like protein [Medicago truncatula])

HSP 1 Score: 279.3 bits (713), Expect = 3.800e-72
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           IAKECADLWPRIASAANAIV
Sbjct: 121 IAKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|902209937|gb|KNA16312.1| (hypothetical protein SOVF_090210 [Spinacia oleracea])

HSP 1 Score: 278.9 bits (712), Expect = 5.000e-72
Identity = 138/140 (98.57%), Postives = 138/140 (98.57%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|568215140|ref|NP_001274965.1| (ribosomal protein L17-like protein [Solanum tuberosum])

HSP 1 Score: 277.3 bits (708), Expect = 1.400e-71
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. NCBI nr
Match: gi|629094248|gb|KCW60243.1| (hypothetical protein EUGRSUZ_H02959 [Eucalyptus grandis])

HSP 1 Score: 277.3 bits (708), Expect = 1.400e-71
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 72  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 131

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 132 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 191

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 192 IGKECADLWPRIASAANAIV 211
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIT9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_174280 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.100e-73
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           IAKECADLWPRIASAANAIV
Sbjct: 121 IAKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: B7FMQ6_MEDTR (60S ribosomal L23-like protein OS=Medicago truncatula GN=MTR_1g069585 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 2.600e-72
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           IAKECADLWPRIASAANAIV
Sbjct: 121 IAKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBZ6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_090210 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.500e-72
Identity = 138/140 (98.57%), Postives = 138/140 (98.57%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: M7ZJF7_TRIUA (60S ribosomal protein L23 OS=Triticum urartu GN=TRIUR3_02289 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.000e-71
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Match: M8C7X0_AEGTA (60S ribosomal protein L23 OS=Aegilops tauschii GN=F775_07694 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.000e-71
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3)

HSP 1 Score: 273.9 bits (699), Expect = 1.000e-72
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGG++GNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_TOBAC (60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.300e-72
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAA +NCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAV+VRQRKPWRRKDGVFMYFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_TORRU (60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.300e-67
Identity = 127/140 (90.71%), Postives = 132/140 (94.29%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGS+GNKFRMSLGLPV AVVNCADNTGAKNLY+IS  G++GRLNRLP+A  GDM
Sbjct: 1   MSKRGRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEM  SAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 139
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_DANRE (60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 8.500e-64
Identity = 120/139 (86.33%), Postives = 130/139 (93.53%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGS+G KFR+SLGLPV AV+NCADNTGAKNLYIISVKGIKGRLNRLPSA  GDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAI 140
           +AKECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
[Close]
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Match: RL23_HUMAN (60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.900e-63
Identity = 119/139 (85.61%), Postives = 130/139 (93.53%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGGS+G KFR+SLGLPV AV+NCADNTGAKNLYIISVKGIKGRLNRLP+A  GDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAI 140
           +AKECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
[Close]
BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 273.9 bits (699), Expect = 5.600e-74
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGG++GNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 273.9 bits (699), Expect = 5.600e-74
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGG++GNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 273.9 bits (699), Expect = 5.600e-74
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 1 

		  

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAAVVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDM 60
           MSKRGRGG++GNKFRMSLGLPVAA VNCADNTGAKNLYIISVKGIKGRLNRLPSAC GDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IAKECADLWPRIASAANAIV 141
           I KECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Match: ATCG00780.1 (ribosomal protein L14)

HSP 1 Score: 65.9 bits (159), Expect = 2.300e-11
Identity = 40/119 (33.61%), Postives = 68/119 (57.14%), Query Frame = 1 

		  

Query: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDMVMATVKKGKPDL---RKKVMPAVIV 85
           +N ADN+GA+ L  I + G   R      A  GD+++A +K+  P+    R +V+ AVIV
Sbjct: 8   LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 67

Query: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIAKECADL-WPRIASAANAIV 141
           R  K  +R +G  + ++DNA V+++ +G  KG+ + G I +E   L + +I S A  ++
Sbjct: 68  RTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEVL 122
The following BLAST results are available for this feature:
BLAST of Spo14875.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902165843|gb|KNA07164.1|5.9e-73100.hypothetical protein SOVF_1742... [more]
gi|922340291|ref|XP_003625359.2|3.8e-7298.560S ribosomal L23-like protein... [more]
gi|902209937|gb|KNA16312.1|5.0e-7298.5hypothetical protein SOVF_0902... [more]
gi|568215140|ref|NP_001274965.1|1.4e-7197.8ribosomal protein L17-like pro... [more]
gi|629094248|gb|KCW60243.1|1.4e-7197.8hypothetical protein EUGRSUZ_H... [more]
back to top
BLAST of Spo14875.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QIT9_SPIOL4.1e-73100.Uncharacterized protein OS=Spi... [more]
B7FMQ6_MEDTR2.6e-7298.560S ribosomal L23-like protein... [more]
A0A0K9RBZ6_SPIOL3.5e-7298.5Uncharacterized protein OS=Spi... [more]
M7ZJF7_TRIUA1.0e-7197.860S ribosomal protein L23 OS=T... [more]
M8C7X0_AEGTA1.0e-7197.860S ribosomal protein L23 OS=A... [more]
back to top
BLAST of Spo14875.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL23_ARATH1.0e-7295.760S ribosomal protein L23 OS=A... [more]
RL23_TOBAC1.3e-7295.760S ribosomal protein L23 OS=N... [more]
RL23_TORRU1.3e-6790.760S ribosomal protein L23 OS=T... [more]
RL23_DANRE8.5e-6486.360S ribosomal protein L23 OS=D... [more]
RL23_HUMAN1.9e-6385.660S ribosomal protein L23 OS=H... [more]
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BLAST of Spo14875.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G04480.15.6e-7495.7Ribosomal protein L14p/L23e fa... [more]
AT2G33370.15.6e-7495.7Ribosomal protein L14p/L23e fa... [more]
AT3G04400.15.6e-7495.7Ribosomal protein L14p/L23e fa... [more]
ATCG00780.12.3e-1133.6ribosomal protein L14[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PGENE3D2.40.150.20coord: 11..140
score: 1.3
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 19..140
score: 19
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 1..140
score: 6.2E
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 22..140
score: 3.4
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 19..140
score: 2.8
IPR000218Ribosomal protein L14PunknownSSF50193Ribosomal protein L14coord: 11..140
score: 1.2
IPR019972Ribosomal protein L14P, conserved sitePROSITEPS00049RIBOSOMAL_L14coord: 79..105
scor
NoneNo IPR availablePANTHERPTHR11761:SF10SUBFAMILY NOT NAMEDcoord: 1..140
score: 6.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006334 nucleosome assembly
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0009555 pollen development
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0006417 regulation of translation
biological_process GO:0019048 modulation by virus of host morphology or physiology
biological_process GO:0071555 cell wall organization
biological_process GO:0009932 cell tip growth
biological_process GO:0009414 response to water deprivation
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0048767 root hair elongation
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0016070 RNA metabolic process
biological_process GO:0009409 response to cold
biological_process GO:0010162 seed dormancy process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0006430 lysyl-tRNA aminoacylation
biological_process GO:0009085 lysine biosynthetic process
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0006096 glycolytic process
biological_process GO:0032776 DNA methylation on cytosine
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0007030 Golgi organization
biological_process GO:0006972 hyperosmotic response
biological_process GO:0006094 gluconeogenesis
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0016570 histone modification
biological_process GO:0006310 DNA recombination
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0006342 chromatin silencing
biological_process GO:0007018 microtubule-based movement
biological_process GO:0051258 protein polymerization
biological_process GO:0007017 microtubule-based process
biological_process GO:0009740 gibberellic acid mediated signaling pathway
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006421 asparaginyl-tRNA aminoacylation
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042545 cell wall modification
biological_process GO:0006412 translation
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0002238 response to molecule of fungal origin
biological_process GO:0009269 response to desiccation
biological_process GO:0008152 metabolic process
biological_process GO:0009790 embryo development
biological_process GO:0051301 cell division
biological_process GO:0019294 keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
biological_process GO:0010015 root morphogenesis
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0008361 regulation of cell size
biological_process GO:0007389 pattern specification process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009926 auxin polar transport
biological_process GO:0008356 asymmetric cell division
biological_process GO:0006364 rRNA processing
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0001510 RNA methylation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0006833 water transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009860 pollen tube growth
biological_process GO:0006457 protein folding
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0007267 cell-cell signaling
biological_process GO:0006949 syncytium formation
biological_process GO:0010306 rhamnogalacturonan II biosynthetic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0042176 regulation of protein catabolic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006414 translational elongation
biological_process GO:0006544 glycine metabolic process
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0009186 deoxyribonucleoside diphosphate metabolic process
biological_process GO:0052546 cell wall pectin metabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008033 tRNA processing
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0016579 protein deubiquitination
biological_process GO:0000338 protein deneddylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009640 photomorphogenesis
biological_process GO:0016571 histone methylation
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009416 response to light stimulus
biological_process GO:0009202 deoxyribonucleoside triphosphate biosynthetic process
biological_process GO:0009088 threonine biosynthetic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009263 deoxyribonucleotide biosynthetic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0052541 plant-type cell wall cellulose metabolic process
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
cellular_component GO:0090406 pollen tube
cellular_component GO:0030117 membrane coat
cellular_component GO:0009579 thylakoid
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0031429 box H/ACA snoRNP complex
cellular_component GO:0000786 nucleosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005730 nucleolus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005971 ribonucleoside-diphosphate reductase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0016592 mediator complex
cellular_component GO:0043229 intracellular organelle
cellular_component GO:0016020 membrane
cellular_component GO:0005874 microtubule
cellular_component GO:0005773 vacuole
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005618 cell wall
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0044424 intracellular part
cellular_component GO:0005634 nucleus
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
cellular_component GO:0048046 apoplast
cellular_component GO:0000502 proteasome complex
molecular_function GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function GO:0030234 enzyme regulator activity
molecular_function GO:0005179 hormone activity
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0005488 binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0050661 NADP binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity
molecular_function GO:0004073 aspartate-semialdehyde dehydrogenase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0030515 snoRNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0004824 lysine-tRNA ligase activity
molecular_function GO:0008676 3-deoxy-8-phosphooctulonate synthase activity
molecular_function GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity
molecular_function GO:0008536 Ran GTPase binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0004816 asparagine-tRNA ligase activity
molecular_function GO:0008483 transaminase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0042393 histone binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004160 dihydroxy-acid dehydratase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo230380.85Barchart | Table
Spo132790.84Barchart | Table
Spo121910.84Barchart | Table
Spo223940.84Barchart | Table
Spo126810.83Barchart | Table
Spo256350.81Barchart | Table
Spo192360.80Barchart | Table
Spo046670.80Barchart | Table
Spo159390.79Barchart | Table
Spo023800.79Barchart | Table
Spo180940.79Barchart | Table
Spo209970.78Barchart | Table
Spo232200.78Barchart | Table
Spo074020.77Barchart | Table
Spo186470.77Barchart | Table
Spo019990.76Barchart | Table
Spo189010.76Barchart | Table
Spo069040.76Barchart | Table
Spo219220.76Barchart | Table
Spo234980.76Barchart | Table
Spo253060.76Barchart | Table
Spo086910.76Barchart | Table
Spo105990.75Barchart | Table
Spo043810.75Barchart | Table
Spo010860.75Barchart | Table
Spo037010.75Barchart | Table
Spo034730.74Barchart | Table
Spo032000.74Barchart | Table
Spo223100.74Barchart | Table
Spo088160.74Barchart | Table
Spo081600.74Barchart | Table
Spo115920.74Barchart | Table
Spo230010.74Barchart | Table
Spo247030.73Barchart | Table
Spo029280.73Barchart | Table
Spo242270.73Barchart | Table
Spo236220.73Barchart | Table
Spo042420.73Barchart | Table
Spo055890.73Barchart | Table
Spo217640.73Barchart | Table
Spo206470.73Barchart | Table
Spo176620.73Barchart | Table
Spo123040.73Barchart | Table
Spo123110.73Barchart | Table
Spo172710.73Barchart | Table
Spo089610.72Barchart | Table
Spo005250.72Barchart | Table
Spo028380.72Barchart | Table
Spo057830.72Barchart | Table
Spo052440.72Barchart | Table
Spo157510.72Barchart | Table
Spo119430.72Barchart | Table
Spo023970.72Barchart | Table
Spo043110.72Barchart | Table
Spo042080.72Barchart | Table
Spo105970.71Barchart | Table
Spo056320.71Barchart | Table
Spo071450.71Barchart | Table
Spo076680.71Barchart | Table
Spo022180.71Barchart | Table
Spo151320.71Barchart | Table
Spo120480.71Barchart | Table
Spo174950.71Barchart | Table
Spo134810.71Barchart | Table
Spo070160.71Barchart | Table
Spo080820.70Barchart | Table
Spo204600.70Barchart | Table
Spo192070.70Barchart | Table
Spo159610.70Barchart | Table
Spo050640.70Barchart | Table
Spo216550.70Barchart | Table
Spo217540.70Barchart | Table
Spo160990.70Barchart | Table
Spo118500.70Barchart | Table
Spo003630.69Barchart | Table
Spo035270.69Barchart | Table
Spo065010.69Barchart | Table
Spo070170.69Barchart | Table
Spo070540.69Barchart | Table
Spo101470.69Barchart | Table
Spo166270.69Barchart | Table
Spo213750.69Barchart | Table
Spo249020.69Barchart | Table
Spo112880.68Barchart | Table
Spo063180.68Barchart | Table
Spo068630.68Barchart | Table
Spo141650.68Barchart | Table
Spo272230.68Barchart | Table
Spo029420.68Barchart | Table
Spo259540.68Barchart | Table
Spo170170.68Barchart | Table
Spo031310.68Barchart | Table
Spo033150.68Barchart | Table
Spo039790.68Barchart | Table
Spo225200.68Barchart | Table
Spo136210.68Barchart | Table
Spo062820.68Barchart | Table
Spo156040.67Barchart | Table
Spo129940.67Barchart | Table
Spo178980.67Barchart | Table
Spo187630.67Barchart | Table
Spo103220.67Barchart | Table
Spo068370.67Barchart | Table
Spo227400.67Barchart | Table
Spo056600.67Barchart | Table
Spo044540.67Barchart | Table
Spo231930.67Barchart | Table
Spo232410.67Barchart | Table
Spo025950.67Barchart | Table
Spo256690.67Barchart | Table
Spo143800.67Barchart | Table
Spo059090.66Barchart | Table
Spo070970.66Barchart | Table
Spo192540.66Barchart | Table
Spo194410.66Barchart | Table
Spo201610.66Barchart | Table
Spo268840.66Barchart | Table
Spo146920.66Barchart | Table
Spo183700.66Barchart | Table
Spo224010.66Barchart | Table
Spo115930.66Barchart | Table
Spo160970.66Barchart | Table
Spo251760.66Barchart | Table
Spo014740.66Barchart | Table
Spo010610.66Barchart | Table
Spo179760.66Barchart | Table
Spo160330.66Barchart | Table
Spo121930.66Barchart | Table
Spo062680.66Barchart | Table
Spo236810.66Barchart | Table
Spo103900.66Barchart | Table
Spo241500.66Barchart | Table
Spo125160.66Barchart | Table
Spo207890.65Barchart | Table
Spo058490.65Barchart | Table
Spo056940.65Barchart | Table
Spo176530.65Barchart | Table
Spo125000.65Barchart | Table
Spo079200.65Barchart | Table
Spo184490.65Barchart | Table
Spo065070.65Barchart | Table