Spo14936 (gene) | SpinachBase

Overview


Name	Spo14936
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protein TIC 214 (Translocon at the inner envelope membrane of chloroplasts 214) (AtTIC214)
Location	SpoScf_00455 : 203914 .. 205175 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGGAGAAGAAGGAACCGAGAAGAAGGTATCAGGAACAACAGGTTTTATTATGGGACAGCTCATGATGTTCATATCGATCTATTATACGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCCTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCCACTAGCAGAAATTCAATGCGTAATCTCAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACTATTTCATTTTACCAAGTTCAATGTTAGCTAGATTAGTGAACATTTATATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGGTATTAGTCTGGATACAGCAAAATAATTCTATTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTCTTTATTACCTGAGTCTACTATTTAGGCAGAATGCCGTCACCTATTTTTACTAACAAACTGAAACAAATGCTAGAAACGAACGAAATTGAGGAAGAAACAAATTTAGAAATAGAAAAAACTTCCGAAACGAAGGAGACTAAACAGGAAGAAGAGGGATTCACCGAAGAAGATCCTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAAAGATCCGAGTGAATGGAAAGGACAAAACAAAGGATGAATTTCACTTAAAAGAAGCATGCTATAAAAATAGCCCAACTTCTTATTCTGGGAATCAAGATATTTCAAAGTTAGAAATACTTAAAAAAGAAAAGAAAATCCTATTATGGTTTCAAAAACCCCTTATTTTTCTTCTTTTCGACTATAAACGTTGGAATCGTCCAATGCGATATATAAAAAACAATCGGTTTGAAAATGCGGTAAGAAATGAAATGTCACAATATTTTTTTTATACATGTCAAAATGATGGAAAACAAAGAATTTCTTTTACATATCCACCTAGTTTATCAATTTTCTGGGAAATGATACAAAGAAAGATTTCTTTGGCTACAACAGAAAAATTCTTATATGATGATGAACTATACAATTATTGGATTTATACGAATGAACAAAAAAAAAACAGCTTAAGCAATGAATTTGCTAATAGAATTACAGTTCTAGACAAAGGACTTTTTTATATAGATGTACTTGA

mRNA sequence

ATGGAAGAAGGAGAAGAAGGAACCGAGAAGAAGGTATCAGGAACAACAGGCAGAATGCCGTCACCTATTTTTACTAACAAACTGAAACAAATGCTAGAAACGAACGAAATTGAGGAAGAAACAAATTTAGAAATAGAAAAAACTTCCGAAACGAAGGAGACTAAACAGGAAGAAGAGGGATTCACCGAAGAAGATCCTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAAAGATCCGAGTGAATGGAAAGGACAAAACAAAGGATGAATTTCACTTAAAAGAAGCATGCTATAAAAATAGCCCAACTTCTTATTCTGGGAATCAAGATATTTCAAAATGTACTTGA

Coding sequence (CDS)

ATGGAAGAAGGAGAAGAAGGAACCGAGAAGAAGGTATCAGGAACAACAGGCAGAATGCCGTCACCTATTTTTACTAACAAACTGAAACAAATGCTAGAAACGAACGAAATTGAGGAAGAAACAAATTTAGAAATAGAAAAAACTTCCGAAACGAAGGAGACTAAACAGGAAGAAGAGGGATTCACCGAAGAAGATCCTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAAAGATCCGAGTGAATGGAAAGGACAAAACAAAGGATGAATTTCACTTAAAAGAAGCATGCTATAAAAATAGCCCAACTTCTTATTCTGGGAATCAAGATATTTCAAAATGTACTTGA

Protein sequence

MEEGEEGTEKKVSGTTGRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKEDPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISKCT

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo14936.1	Spo14936.1	mRNA

Homology

[Close]

BLAST of Spo14936.1 vs. NCBI nr
Match: gi|11497576|ref|NP_054983.1| (hypothetical protein SpolCp079 [Spinacia oleracea])

HSP 1 Score: 197.2 bits (500), Expect = 1.700e-47
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 232 GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 291

Query: 77  DPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISK
Sbjct: 292 DPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISK 336

[Close]

BLAST of Spo14936.1 vs. NCBI nr
Match: gi|11497589|ref|NP_054996.1| (ycf1 protein [Spinacia oleracea])

HSP 1 Score: 197.2 bits (500), Expect = 1.700e-47
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 232 GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 291

Query: 77  DPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISK
Sbjct: 292 DPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISK 336

[Close]

BLAST of Spo14936.1 vs. NCBI nr
Match: gi|982898222|ref|YP_009221868.1| (hypothetical chloroplast RF19 (chloroplast) [Mesembryanthemum crystallinum])

HSP 1 Score: 176.4 bits (446), Expect = 3.000e-41
Identity = 97/107 (90.65%), Postives = 100/107 (93.46%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFT KLK+  ET E EEET++EIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 238 GRMPSPIFTKKLKETSETKESEEETDVEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDE--FHLKEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDE  FHLKEACYKNSPTSYSGNQDISK
Sbjct: 298 DPDKIDETEKIRVNGKDKTKDEFHFHLKEACYKNSPTSYSGNQDISK 344

[Close]

BLAST of Spo14936.1 vs. NCBI nr
Match: gi|982898210|ref|YP_009221856.1| (hypothetical chloroplast RF19 (chloroplast) [Mesembryanthemum crystallinum])

HSP 1 Score: 176.4 bits (446), Expect = 3.000e-41
Identity = 97/107 (90.65%), Postives = 100/107 (93.46%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFT KLK+  ET E EEET++EIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 238 GRMPSPIFTKKLKETSETKESEEETDVEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDE--FHLKEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDE  FHLKEACYKNSPTSYSGNQDISK
Sbjct: 298 DPDKIDETEKIRVNGKDKTKDEFHFHLKEACYKNSPTSYSGNQDISK 344

[Close]

BLAST of Spo14936.1 vs. NCBI nr
Match: gi|377581142|gb|AFB70709.1| (Ycf1 protein, partial (chloroplast) [Mollugo verticillata])

HSP 1 Score: 174.5 bits (441), Expect = 1.200e-40
Identity = 96/109 (88.07%), Postives = 99/109 (90.83%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFT KLK+  ET E EEET++EIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 238 GRMPSPIFTKKLKETSETKESEEETDIEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDEFHL----KEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDEFH     KEACYKNSPTSYSGNQDISK
Sbjct: 298 DPDKIDETEKIRVNGKDKTKDEFHFHXXXKEACYKNSPTSYSGNQDISK 346

[Close]

BLAST of Spo14936.1 vs. UniProtKB/TrEMBL
Match: A0A0G2R820_MESCR (Hypothetical chloroplast RF19 OS=Mesembryanthemum crystallinum GN=ycf1 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.100e-41
Identity = 97/107 (90.65%), Postives = 100/107 (93.46%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFT KLK+  ET E EEET++EIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 238 GRMPSPIFTKKLKETSETKESEEETDVEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDE--FHLKEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDE  FHLKEACYKNSPTSYSGNQDISK
Sbjct: 298 DPDKIDETEKIRVNGKDKTKDEFHFHLKEACYKNSPTSYSGNQDISK 344

[Close]

BLAST of Spo14936.1 vs. UniProtKB/TrEMBL
Match: A0A0G2R7Z6_MESCR (Hypothetical chloroplast RF19 OS=Mesembryanthemum crystallinum GN=ycf1 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.100e-41
Identity = 97/107 (90.65%), Postives = 100/107 (93.46%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFT KLK+  ET E EEET++EIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 238 GRMPSPIFTKKLKETSETKESEEETDVEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDE--FHLKEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDE  FHLKEACYKNSPTSYSGNQDISK
Sbjct: 298 DPDKIDETEKIRVNGKDKTKDEFHFHLKEACYKNSPTSYSGNQDISK 344

[Close]

BLAST of Spo14936.1 vs. UniProtKB/TrEMBL
Match: H6T9N5_MOLVE (Ycf1 protein (Fragment) OS=Mollugo verticillata GN=ycf1 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 8.100e-41
Identity = 96/109 (88.07%), Postives = 99/109 (90.83%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFT KLK+  ET E EEET++EIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 238 GRMPSPIFTKKLKETSETKESEEETDIEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDEFHL----KEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDEFH     KEACYKNSPTSYSGNQDISK
Sbjct: 298 DPDKIDETEKIRVNGKDKTKDEFHFHXXXKEACYKNSPTSYSGNQDISK 346

[Close]

BLAST of Spo14936.1 vs. UniProtKB/TrEMBL
Match: H6T9N7_POROL (Ycf1 protein (Fragment) OS=Portulaca oleracea GN=ycf1 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.100e-40
Identity = 96/109 (88.07%), Postives = 99/109 (90.83%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFT KLK+  ET E EEET++EIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 238 GRMPSPIFTKKLKETSETKESEEETDVEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDEFHL----KEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDEFH     KEACYKNSPTSYSGNQDISK
Sbjct: 298 DPDKIDETEKIRVNGKDKTKDEFHFHLKEKEACYKNSPTSYSGNQDISK 346

[Close]

BLAST of Spo14936.1 vs. UniProtKB/TrEMBL
Match: H6T9N3_9CARY (Ycf1 protein (Fragment) OS=Didierea madagascariensis GN=ycf1 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.100e-40
Identity = 96/109 (88.07%), Postives = 99/109 (90.83%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFT KLK+  ET E EEET++EIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 238 GRMPSPIFTKKLKETSETKESEEETDVEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDEFHL----KEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDEFH     KEACYKNSPTSYSGNQDISK
Sbjct: 298 DPDKIDETEKIRVNGKDKTKDEFHFHLKEKEACYKNSPTSYSGNQDISK 346

[Close]

BLAST of Spo14936.1 vs. ExPASy Swiss-Prot
Match: TI214_SPIOL (Protein TIC 214 OS=Spinacia oleracea GN=TIC214 PE=3 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 1.000e-49
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE
Sbjct: 232 GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 291

Query: 77  DPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISK 122
           DPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISK
Sbjct: 292 DPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSGNQDISK 336

[Close]

BLAST of Spo14936.1 vs. ExPASy Swiss-Prot
Match: TI214_VITVI (Protein TIC 214 OS=Vitis vinifera GN=TIC214 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.800e-32
Identity = 82/112 (73.21%), Postives = 92/112 (82.14%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNE---IEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSE 76
           GR+PSPI T K+K+  ET E    EEET++EIE+TSETK TKQE+E  TEEDPSPSLFSE
Sbjct: 238 GRIPSPILTKKMKETSETEERGESEEETDVEIERTSETKGTKQEQERSTEEDPSPSLFSE 297

Query: 77  EKEDPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSP---TSY-SGNQDISK 122
           EKEDPDKIDETE+IRVNGK+KTKDEFH KE CYKNSP   TSY  GNQ+ SK
Sbjct: 298 EKEDPDKIDETEEIRVNGKEKTKDEFHFKETCYKNSPVYETSYLDGNQENSK 349

[Close]

BLAST of Spo14936.1 vs. ExPASy Swiss-Prot
Match: TI214_POPTR (Protein TIC 214 OS=Populus trichocarpa GN=TIC214 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.100e-30
Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GR+PSPIFT KLK+  ET E EEET++EIE T ETK TKQE+EG TEEDPS SLFSEEKE
Sbjct: 238 GRIPSPIFTKKLKETSETEEREEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDE--FHLKEACYKNSP---TSY-SGNQDISK 122
           +PDKIDETE+IRVNGK+KTKDE  FH KE CYKN P   T Y  GNQ+ SK
Sbjct: 298 NPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNRPVYETFYLDGNQENSK 348

[Close]

BLAST of Spo14936.1 vs. ExPASy Swiss-Prot
Match: TI214_POPAL (Protein TIC 214 OS=Populus alba GN=TIC214 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.100e-30
Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GR+PSPIFT KLK+  ET E EEET++EIE T ETK TKQE+EG TEEDPS SLFSEEKE
Sbjct: 238 GRIPSPIFTKKLKETSETEEREEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEEKE 297

Query: 77  DPDKIDETEKIRVNGKDKTKDE--FHLKEACYKNSP---TSY-SGNQDISK 122
           +PDKIDETE+IRVNGK+KTKDE  FH KE CYKN P   T Y  GNQ+ SK
Sbjct: 298 NPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNRPVYETFYLDGNQENSK 348

[Close]

BLAST of Spo14936.1 vs. ExPASy Swiss-Prot
Match: TI214_DAUCA (Protein TIC 214 OS=Daucus carota GN=TIC214 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.900e-27
Identity = 73/100 (73.00%), Postives = 79/100 (79.00%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETN-EIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEK 76
           GR+PSPIFT KL    E   E EEET++EIE  SETK TKQE+EG TEEDPSPSLFSEEK
Sbjct: 235 GRIPSPIFTKKLNPQTEEGWESEEETDVEIETASETKGTKQEQEGSTEEDPSPSLFSEEK 294

Query: 77  EDPDKIDETEKIRVNGKDKTKDEFHLKEACYKNSPTSYSG 116
           EDPDKIDETE+IRVNGK+KTKDEFH  E  Y NSP  Y G
Sbjct: 295 EDPDKIDETEEIRVNGKEKTKDEFHFTEIRYNNSPV-YKG 333

[Close]

BLAST of Spo14936.1 vs. TAIR (Arabidopsis)
Match: ATCG01130.1 (Ycf1 protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.700e-13
Identity = 55/107 (51.40%), Postives = 64/107 (59.81%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GR+PSPIFT KLK                  TSET  TKQ++E  TEE P PSLFSEE E
Sbjct: 241 GRIPSPIFTKKLKG-----------------TSETGGTKQDQEVSTEEAPFPSLFSEEGE 300

Query: 77  DPDKIDETEKIRVNGKDKTK--DEFHLKEAC-YKNSPTSYSGNQDIS 121
           D DKIDE E+IRVNGKDK    DEFH++    YK    +  GN++ S
Sbjct: 301 DLDKIDEMEEIRVNGKDKINKDDEFHVRTYYNYKTVSENLYGNKENS 330

[Close]

BLAST of Spo14936.1 vs. TAIR (Arabidopsis)
Match: ATCG01000.1 (Ycf1 protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.700e-13
Identity = 55/107 (51.40%), Postives = 64/107 (59.81%), Query Frame = 1


		  
Query: 17  GRMPSPIFTNKLKQMLETNEIEEETNLEIEKTSETKETKQEEEGFTEEDPSPSLFSEEKE 76
           GR+PSPIFT KLK                  TSET  TKQ++E  TEE P PSLFSEE E
Sbjct: 241 GRIPSPIFTKKLKG-----------------TSETGGTKQDQEVSTEEAPFPSLFSEEGE 300

Query: 77  DPDKIDETEKIRVNGKDKTK--DEFHLKEAC-YKNSPTSYSGNQDIS 121
           D DKIDE E+IRVNGKDK    DEFH++    YK    +  GN++ S
Sbjct: 301 DLDKIDEMEEIRVNGKDKINKDDEFHVRTYYNYKTVSENLYGNKENS 330

The following BLAST results are available for this feature:

BLAST of Spo14936.1 vs. NCBI nr
BLAST of Spo14936.1 vs. UniProtKB/TrEMBL
BLAST of Spo14936.1 vs. ExPASy Swiss-Prot
BLAST of Spo14936.1 vs. TAIR (Arabidopsis)

BLAST of Spo14936.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|11497576\|ref\|NP_054983.1\|	1.7e-47	100.	hypothetical protein SpolCp079...	[more]
gi\|11497589\|ref\|NP_054996.1\|	1.7e-47	100.	ycf1 protein [Spinacia olerace...	[more]
gi\|982898222\|ref\|YP_009221868.1\|	3.0e-41	90.6	hypothetical chloroplast RF19 ...	[more]
gi\|982898210\|ref\|YP_009221856.1\|	3.0e-41	90.6	hypothetical chloroplast RF19 ...	[more]
gi\|377581142\|gb\|AFB70709.1\|	1.2e-40	88.0	Ycf1 protein, partial (chlorop...	[more]

BLAST of Spo14936.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0G2R820_MESCR	2.1e-41	90.6	Hypothetical chloroplast RF19 ...	[more]
A0A0G2R7Z6_MESCR	2.1e-41	90.6	Hypothetical chloroplast RF19 ...	[more]
H6T9N5_MOLVE	8.1e-41	88.0	Ycf1 protein (Fragment) OS=Mol...	[more]
H6T9N7_POROL	1.1e-40	88.0	Ycf1 protein (Fragment) OS=Por...	[more]
H6T9N3_9CARY	1.1e-40	88.0	Ycf1 protein (Fragment) OS=Did...	[more]

BLAST of Spo14936.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TI214_SPIOL	1.0e-49	100.	Protein TIC 214 OS=Spinacia ol...	[more]
TI214_VITVI	5.8e-32	73.2	Protein TIC 214 OS=Vitis vinif...	[more]
TI214_POPTR	4.1e-30	72.0	Protein TIC 214 OS=Populus tri...	[more]
TI214_POPAL	4.1e-30	72.0	Protein TIC 214 OS=Populus alb...	[more]
TI214_DAUCA	1.9e-27	73.0	Protein TIC 214 OS=Daucus caro...	[more]

BLAST of Spo14936.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
ATCG01130.1	1.7e-13	51.4	Ycf1 protein	[more]
ATCG01000.1	1.7e-13	51.4	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 17..113 score: 4.1
None	No IPR available	unknown	Coil	Coil	coord: 38..58 scor
None	No IPR available	PANTHER	PTHR33163	FAMILY NOT NAMED	coord: 17..121 score: 1.9
None	No IPR available	PANTHER	PTHR33163:SF3	MEMBRANE PROTEIN YCF1-RELATED	coord: 17..121 score: 1.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19063	0.71	Barchart \| Table
Spo14937	0.66	Barchart \| Table
Spo11061	0.65	Barchart \| Table