Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTGGCTCAAAAACACACTTGTTGTTCTTGTTGTTGTTGTTGTTGTTCTTCTTCTTCTCCTTGGTTGTTTTTCCAGAACAGTCGCAAACAGAGAAATGGCATTAGATGTGGGAGTAACACAGAAATATGGTGAACCATCATATTGGAATAAAAGGTACAAACATGATAAAACCCCATTTGATTGGTACCAGAATTACACCTCTTTAGCTCCTCTTCTTCGTCTTTATGTCCCTCCTCCTCATCGTCGTATCCTCATCGTCGGTTGCGGCAACTCCGGTTTGTTTTCTTTTTTTATTACTATTTACTATTACGGTTATCACAATTTCATTAATTAATTGGTATTCATTTTAGAAATTAATCAAAATATCATTTAATCGTCGATCAGTCCGCATGTATCATTTTCCTTGTTATTGTTATTGCTAGTAACATTATTTTATGTTTTTCATTGATTCATTTCAATTTTTCTGTATAGTGGGAATTTTTTTGATTTTTATCATATGATCTCATGTTATTTAATTAATTTTAATGGTGTGATTGTTTGATATGATTATGATCATGTAGTTGTTTGATTGTTTGTTTTTGTAATTAATTAATTAATAAATAAAATTGGTGCATTTCATTTCATTTATGTTATTTTTTAATCAGTTGGATTCAAAATATGGAGTATTTTTTTTGGTATTGAAAACATTCATTCTTCAACCTAATAATGGTAAAATACTCTGACAACTGTGTTTGTTAATGATAAAGTCAATGCTAAGGTAAATGCGATTTTGTTTACCTAGACCTGATCAAGATGGGCCCGGCCCGCCCGAATTTTTTGCGGGTTTGGGCAGAATTTTCCGATCCGGTTTCGGGGCCCGGTCCGACCCGACCCGGAAATTTTATTTTTTTGGGCGGGTTTGGGAAACACAAAAATACACTTTTTTAGTTATAAATTTGGCCCGGCCCGAATGGCCCGAAAATTACGGGGTTGGGCACAATTTTTTGGCCCGAATCTTGGCCCGTCCCGACATAGCGGGTGATTTTTTACGCTCAAGCCCGGCCCGAACCCGGCACGGCCTGCCATTTGATCAGGTCTAGATTTTGAGTAAGTATTCCCTCCGTCCCTTTTATTCTTTACGTTAGCTATCATGTAAGCGATTTAACAAATAAGTAATGTAGATAAAGATTCTCTTTTTGTTTAACTTAAACAATGCAAATTACGTTTATTAATCATATTTTTCACTTTTATCAAAAATTTAACATTGGAAAAATAAGAAAGAAATGGGAAAGTGTGAGAGATTTAATCGTTAAAATGAGCCAATGAATTTGATTGGTTGAAATAATCATTTGGCACGATTTTTGACAAAATATTAGCGATTTTTATGCTACAATATAAAACGAAAGATTCTAAGTGTAAAGATTAAAATGAGACACTAGAAACAGAAAAGGTAAATAATAAATTGGGACAGAGTGATTATATTATAATATGGACAATTAAAGATTTATTTATTAGAACACACATACAGTTAAGGTAAACCGCTACTTCGGTCAGGCTCTTCGTTATCACTACCAGTATTGAAATGTTGGTTAAAAGATTTTGAAAATAGGCGGTACAACGAACTTCGAATTAATCATATTTATGATATTATTGAAAATTGACAACTGAAAACTATAACTATACAGTACTACTGGTTTCCAAACTATTGTCTTTTTCTTCCTCTTGTCAAAAAAAAAAAAAAAAACTATTGTCTTTTTCTGGTGTACGGAACCACTTCCAAAGTACATAAAGCACTTTTGGATATGGTGCCAAATGTGGCTCCAAGTTATGTTGGATTAAAGACATGACGACGTGAAATGACCAGTTTACCACTGAGATTGATTGACGGTACATAGAGCTTGTATTTCTTAGAGGAATTATTATGAATATTTGTTGAGGATAACGTAGTTAAATCCTCAACAATATCCGAATATATGAACTTATATGTCTGGACCTTGTATTGGAAATTGATGTGGTCAAAGGTGCAAGACTTTTGAGGATCTTTTATGTTTGTTGTATATTCTCTTTTGTCTGTTTTTCTGGGCAGAAGAAGCAAAGATTTGACCTGCGCGGTCAACTCATAAGTCTCCTGTAGTTTGTAGTTTGTAGTTTGTAGTTTGTAGTTTGTAGTTTAGTGAGGATGCTTAAGCCTCAGTTTCTGCTAAATCTTTGTGTTAGCTGTTTGACTTCTGTACTCCAAAAGAAGAAAGGTGGTGTTGAGGAGAGGAGAAATCAATGTTGACAACGTCACAACGGAATAGGAAAAGGAAGTATCTGATGTTGTATTGCTGGACTGTTGGTATTGTCAGCTGAGGTAATTAAGGTGATGTTGCTTAAACTGAAAACATACTAGCCATTTCTTAGCACCGAACTGAATTTTACTGGATTTTCTTCAAATGACTGAAATATTAGACTTCTTTGTAGTTCCTCGTGGACTTTTCAGTTAATATATCGTGGTAGCTAATATTGACTAACACGTGGAGAAACAAGAGGCAAACATATTGATGTGATGATTTATAGTTAAGTTTTCTGCCCCAATAATTCTTACCGAGTACCCAAGACGTTAACATATTCCCTTGTTCCTCTTAGGTCTTCCTCCTCTCTTGCTTTTGGCAAGCAAGATAAAAAGAGTGCTTGCAAAAATCACGAGGAGAGCAAACCTTGTATGAAAGATTCCTCTAACTCAAGATCCTCTTCCTCTTCTCGTTAGACTATGCTAGATCTTTATCACCGATCCATTGATCGTGCTGTACTGCATGTGTAAAAAACTGAAATGATCCTCAGTCTTTTCCTTTTATCTGCGAGTGACTAATGATGATTCTGTCTCCTCAAGCCAATAGGCCCAAGATAATGAGCCATATCCCATAATTTGGAGACTTTCAAAAAACACAAGTTGTTGGGATATAAAACTGGTATCTAACTATCTATATGTTCCAGTATGTGACTTGTCGTCCTCCTACACTTTTCCTTTTGTAAATGCAGTCTTTGCCTTTCTTACTTAGGAGAAATTTTGAGATTTGCCTCCTCATTAAGTTTATGTGAAGCACATTTTGTCCTACATTTCTGTATTATTGAATACCGCTTTCATGATTTTGCCTCTCAACCCACCTGGTATGATGTATACTTTAACTAGTTAGCACCCGTACAGTGCACATTATCATTAATTTTGTTTGAACATTTAGTTTATTCAAATGCTATGTTAATATGTGTGATAAAGGTAATTTCAAAGTGGACGTTAATTAATAATTCTGATTTCCAATGCCAATAACTAAGAAAAGGGAGTTGCATTTAGATGCAATAATAAAAGTGTGCTTTAGTATGTAATAATATAGCTTTTTCTCTCTATGGTTGCAGCATTTAGTGAAGACATGGCAGATGATGGATACGAGGATATTGTCAACATCGATATATCCTCTGTAGCGATTGAAGCAATGCAGAAAAAACACTCTAACCACCCACAACTTAAGTGTATCCTCAATATAATCTATTTATTTCTGTTTGACTTGTAAAAATGATCATCAATTTTAGTTTTAGGAGAATCTGTTATCTTGTTGAGCTTGGTATTTTGACAAAGTGTGATAAGATATTAGGTATAACACAAGAGTTTTAAATTTTAATTCTCAGTTACTTATCCTTAACAACTTGGTAGATTTTACTATGGATGTTCGAGAAATGGGTACCCTTGAAACAGGCTCATTTGATGCAGTTATTGACAAAGGTACTTGTTTTACTTCTGAAAAGCGTCACAATTATGTTGCCAAAAAACAAGGCAAAAATGTTACTTAGATATGTTTGTCTGTTTTTTCCATCTAACGCGGCTTTCTGATACTTTCCAGGAACACTTGATACTATTCTGGTGAGTATTGTTTGAAAAGTAGTTTTGTCTTCGACAAAGGGAAATGTGCGCTTACAGAGTTTGTTTTTACAGTGTGGGAACGACTCAAAGCAGAACTCTTCTAGTATGCTTGCGGAAGTTGGGCGGTACGTGTAGTAGCAAAACTGTTGAGAACTAATGTTATTGTTTTCTTTTTCGATACATTGATCGATCATTTATTGAAGCCGTTATTTTATAAACTATAGGGTCCTCAAGGACAAAGGGGTTTATATACTGGTAATTATGTCTATCCTCACTTTCTCTCTTTCCTTCACCAAAATAATTGAGTATTCAGTTTTTCGGTTCTTGTTTGTTCGGCTTCAAAACTAATCCTTGCATTGAATATCCTGATTCACTAAATTGGGTTGAAAAGTATTTAATTTTGTATGGCCGTAACTGCATGGTCTCTATTGATTGATGCAGATTACATATGGAGCACCCTCATACCGTTTAGTGTATCTGAAGAATTCATGCAAGTGGAAGATGAAGCTCCATGTGATAGGTTGGTGGGAAATGTATGAATAGAATACTTGTTAATATTACCTGGAAATTTATTGTTTTCTCAAGTTTACATGAGTTGTTCAACAGAAAAATCAATCTCTGGCGTAAAAGATGTAGACAGAAAAACATGGGAGCTTACGAAACCTGTTCCCTTAAATCAGAAGGGAAAGTCCATGGAAGATTTCATTGGCGCGACCCCGGATGTTCATTATATATACGTCTGTGTTAAAGTGAGTGTGTTGCATTCTGTGACAGATTTCTTGAGTTTATCCAACTTTTATGCCTTCGGATTACTCATGGTTATTTGTGTTATAGGATGATTCGTTGGAACGGGGAGAAATAGACGAGTCTGTAGTTGAGTGA CTTTGGCTCAAAAACACACTTGTTGTTCTTGTTGTTGTTGTTGTTGTTCTTCTTCTTCTCCTTGGTTGTTTTTCCAGAACAGTCGCAAACAGAGAAATGGCATTAGATGTGGGAGTAACACAGAAATATGGTGAACCATCATATTGGAATAAAAGGTACAAACATGATAAAACCCCATTTGATTGGTACCAGAATTACACCTCTTTAGCTCCTCTTCTTCGTCTTTATGTCCCTCCTCCTCATCGTCGTATCCTCATCGTCGGTTGCGGCAACTCCGCATTTAGTGAAGACATGGCAGATGATGGATACGAGGATATTGTCAACATCGATATATCCTCTGTAGCGATTGAAGCAATGCAGAAAAAACACTCTAACCACCCACAACTTAAGTATTTTACTATGGATGTTCGAGAAATGGGTACCCTTGAAACAGGCTCATTTGATGCAGTTATTGACAAAGGAACACTTGATACTATTCTGTGTGGGAACGACTCAAAGCAGAACTCTTCTAGTATGCTTGCGGAAGTTGGGCGGGTCCTCAAGGACAAAGGGGTTTATATACTGATTACATATGGAGCACCCTCATACCGTTTAGTGTATCTGAAGAATTCATGCAAGTGGAAGATGAAGCTCCATGTGATAGAAAAATCAATCTCTGGCGTAAAAGATGTAGACAGAAAAACATGGGAGCTTACGAAACCTGTTCCCTTAAATCAGAAGGGAAAGTCCATGGAAGATTTCATTGGCGCGACCCCGGATGTTCATTATATATACGTCTGTGTTAAAGATGATTCGTTGGAACGGGGAGAAATAGACGAGTCTGTAGTTGAGTGA ATGGCATTAGATGTGGGAGTAACACAGAAATATGGTGAACCATCATATTGGAATAAAAGGTACAAACATGATAAAACCCCATTTGATTGGTACCAGAATTACACCTCTTTAGCTCCTCTTCTTCGTCTTTATGTCCCTCCTCCTCATCGTCGTATCCTCATCGTCGGTTGCGGCAACTCCGCATTTAGTGAAGACATGGCAGATGATGGATACGAGGATATTGTCAACATCGATATATCCTCTGTAGCGATTGAAGCAATGCAGAAAAAACACTCTAACCACCCACAACTTAAGTATTTTACTATGGATGTTCGAGAAATGGGTACCCTTGAAACAGGCTCATTTGATGCAGTTATTGACAAAGGAACACTTGATACTATTCTGTGTGGGAACGACTCAAAGCAGAACTCTTCTAGTATGCTTGCGGAAGTTGGGCGGGTCCTCAAGGACAAAGGGGTTTATATACTGATTACATATGGAGCACCCTCATACCGTTTAGTGTATCTGAAGAATTCATGCAAGTGGAAGATGAAGCTCCATGTGATAGAAAAATCAATCTCTGGCGTAAAAGATGTAGACAGAAAAACATGGGAGCTTACGAAACCTGTTCCCTTAAATCAGAAGGGAAAGTCCATGGAAGATTTCATTGGCGCGACCCCGGATGTTCATTATATATACGTCTGTGTTAAAGATGATTCGTTGGAACGGGGAGAAATAGACGAGTCTGTAGTTGAGTGA MALDVGVTQKYGEPSYWNKRYKHDKTPFDWYQNYTSLAPLLRLYVPPPHRRILIVGCGNSAFSEDMADDGYEDIVNIDISSVAIEAMQKKHSNHPQLKYFTMDVREMGTLETGSFDAVIDKGTLDTILCGNDSKQNSSSMLAEVGRVLKDKGVYILITYGAPSYRLVYLKNSCKWKMKLHVIEKSISGVKDVDRKTWELTKPVPLNQKGKSMEDFIGATPDVHYIYVCVKDDSLERGEIDESVVE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14963.1 vs. NCBI nr
Match: gi|902154441|gb|KNA05805.1| (hypothetical protein SOVF_186910 isoform A [Spinacia oleracea]) HSP 1 Score: 507.3 bits (1305), Expect = 1.500e-140 Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo14963.1 vs. NCBI nr
Match: gi|731323787|ref|XP_010672622.1| (PREDICTED: methyltransferase-like protein 13 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 379.8 bits (974), Expect = 3.600e-102 Identity = 179/245 (73.06%), Postives = 206/245 (84.08%), Query Frame = 1
BLAST of Spo14963.1 vs. NCBI nr
Match: gi|902154442|gb|KNA05806.1| (hypothetical protein SOVF_186910 isoform B [Spinacia oleracea]) HSP 1 Score: 364.8 bits (935), Expect = 1.200e-97 Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 1
BLAST of Spo14963.1 vs. NCBI nr
Match: gi|568871153|ref|XP_006488757.1| (PREDICTED: methyltransferase-like protein 13 isoform X1 [Citrus sinensis]) HSP 1 Score: 330.5 bits (846), Expect = 2.500e-87 Identity = 152/228 (66.67%), Postives = 182/228 (79.82%), Query Frame = 1
BLAST of Spo14963.1 vs. NCBI nr
Match: gi|567852215|ref|XP_006419271.1| (hypothetical protein CICLE_v10005764mg [Citrus clementina]) HSP 1 Score: 330.1 bits (845), Expect = 3.300e-87 Identity = 152/228 (66.67%), Postives = 182/228 (79.82%), Query Frame = 1
BLAST of Spo14963.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEV9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_186910 PE=4 SV=1) HSP 1 Score: 507.3 bits (1305), Expect = 1.000e-140 Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo14963.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTS2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g059880 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.500e-102 Identity = 179/245 (73.06%), Postives = 206/245 (84.08%), Query Frame = 1
BLAST of Spo14963.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGX1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_186910 PE=4 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 8.400e-98 Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 1
BLAST of Spo14963.1 vs. UniProtKB/TrEMBL
Match: A0A067FXL7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026558mg PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.800e-87 Identity = 152/228 (66.67%), Postives = 182/228 (79.82%), Query Frame = 1
BLAST of Spo14963.1 vs. UniProtKB/TrEMBL
Match: V4S6I7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005764mg PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 2.300e-87 Identity = 152/228 (66.67%), Postives = 182/228 (79.82%), Query Frame = 1
BLAST of Spo14963.1 vs. ExPASy Swiss-Prot
Match: MET13_BOVIN (Methyltransferase-like protein 13 OS=Bos taurus GN=METTL13 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.500e-26 Identity = 65/155 (41.94%), Postives = 95/155 (61.29%), Query Frame = 1
BLAST of Spo14963.1 vs. ExPASy Swiss-Prot
Match: MET13_HUMAN (Methyltransferase-like protein 13 OS=Homo sapiens GN=METTL13 PE=1 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 9.400e-26 Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = 1
BLAST of Spo14963.1 vs. ExPASy Swiss-Prot
Match: MET13_MOUSE (Methyltransferase-like protein 13 OS=Mus musculus GN=Mettl13 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.700e-25 Identity = 61/155 (39.35%), Postives = 95/155 (61.29%), Query Frame = 1
BLAST of Spo14963.1 vs. ExPASy Swiss-Prot
Match: MET13_DANRE (Methyltransferase-like protein 13 OS=Danio rerio GN=mettl13 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.700e-24 Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 1
BLAST of Spo14963.1 vs. ExPASy Swiss-Prot
Match: ECE2_HUMAN (Endothelin-converting enzyme 2 OS=Homo sapiens GN=ECE2 PE=1 SV=4) HSP 1 Score: 109.8 bits (273), Expect = 4.400e-23 Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 1
BLAST of Spo14963.1 vs. TAIR (Arabidopsis)
Match: AT3G17365.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 263.5 bits (672), Expect = 1.300e-70 Identity = 137/264 (51.89%), Postives = 166/264 (62.88%), Query Frame = 1
BLAST of Spo14963.1 vs. TAIR (Arabidopsis)
Match: AT3G60910.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 221.1 bits (562), Expect = 7.600e-58 Identity = 107/234 (45.73%), Postives = 147/234 (62.82%), Query Frame = 1
BLAST of Spo14963.1 vs. TAIR (Arabidopsis)
Match: AT2G31740.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 92.0 bits (227), Expect = 5.300e-19 Identity = 64/185 (34.59%), Postives = 99/185 (53.51%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14963.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14963.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14963.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo14963.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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