Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGACCGACAAAAAAGCGGCAGTATGCGTAACAGGAGCAAACGGGTTCATAGGCACATACCTAGTAAAGACCCTGATTGAATCCGGGTACACCACCATCCACTGCTCCATCTTCCCCAACTCCTCTTCCTCCCACCTTTTCTCTCTCTTCCCTTCCGCCTCCATTCGCATCTTCGAGGCTGATATCCTCGACTACGACGCCGTTTCGAGGGCTGTTGAAGGTTGTCACGGTGTGTTTCACGTGGCATCTCCTTGTACCTTAGAAGATCCCCGGGATCCACAAGCTGAGCTAGTGGACCCCGCTGTTAAAGGCACCCAGAACGTTCTAGAAGCTTCTAAGAATCACGGAGTAAGGCGGGTGGTGCTCACTTCCTCCATCTCTGCTATGGTTCCTAATTTTGCTTGGCCCACTTCTTTGCCTGTTGATGAGTCTTGTTGGACTGATATTAATTACTGCCGCTCTCACCAGGTTCCCTCTCTCTCCTCAAATCACACTATCATACATTCATACTATCATCAGAAGACTTTATACTTTAACCAACCATGCTAGTAGAGTAGTAGATACTCGACCATCCCATTAAATGTTTGCTAATTACTTAATTATAATTATAAGGTGTTTCTTCTTTTTTATTATAATTAATTTATGTAATTTTAAGATAATGAGTTATGTTAAGTAAGGCCTTGTAATGATTAAAGAGTTCAAACTTCAAACAATAGTGAAATTGGAGTGGTTTTGTTGGAATGTTTGAGCCTTCGTCAGAAAGGGGAATCTATTTAATTCAAGTGGAATTTTTTTTTGTTTTTTTGTTTTAAGCTGATTTCTATGATAAACAAAATAAAGTTGAATTGCAATGAGAAATAATACGCCTGCCGCATTTCTAAGCTACAGTATCATCATATTACAGTTGATGTTACCATTAACTAAGAATACTAAAGAAAGATTACATTAGTATTGAAGAAATGTAAATTTCAAGTAATAAAGGATAGTCGTGGTATTTTAACACAAGTCTTAAAATTTATACTTTGTTCGCAGGTTATTTGTTTTGATGTGTAATTTTGAATGACAATATAAAATGTCTAGCTTTTTTAATTTTTATTTTTTTCCTGTAAGCTGATGCTCACTCTCTGAATTACATTGCCGTAACTTATTGGGTAGTGTTTATGTGTATACATTTCACAGAAATGGTACCCGGTATCTAAAACATTGGCAGAAAAAACTGCGTGGGAATTCTCACAAAAGCATGGATTAGATGTAGTGGGTATTAATCCAGGTACATGTCTTGGCCCGCTGTTGCAGCCAGGCTTGAATGCGAGCTGTGCTGTACTGCAGCAGCTGCTTCAGGGGTCAAAATACACTCAGGAATGCCACTGGCTAGGGGCAGTACATGTCAAAGATGTGGCAAGAGCTCAAGTCTTGCTGTTTGAGACCCCTGCTGTTTCTGGCCGCTACCTTTGCACCAATGGTATCTACCAGTTTGCTGATTTCGCTGCCATTGTCTCTCAACTCTTCCCAGAGTATCCAATTCACAGGTTTCATTCATCTCCTTTGTTCACTTAATTCTACGACTAGTACTTTATTATCACCACTTATTTTTAGGCTATCAAAATTTCAATTCTATTCTTGCCATTTATAATTATGTTTTTGTTTGTGTAAGGTTGTTATCATGTTGCTTTATTGTTCATATTTTGGTGATTGGGTATCATACTATCATGTATTTGATGACGGATGGTAATATGGTATGCCAGAACTGGTATTAGTTTTTACTTGATTTTGTTTATGAGAATTATGACTATATATAAGGCTGTTGAATCTTGAAGAATTCAGTCGTACGATGGGGTGATATTATCTGCTTATAAATACAGAAGCATACACGCATGGGTAATAAATTGAATGAAACATGTAAAGGCATAAGTTATATATTGTTCTTCACTTTTACCTCTTTATCACCTCTGCCGAGAAGAATATGAAATAAGAGGTGAATAACAAAAGCAGTGAGTGGCCTGATATGTGAATTGTTTATATTTTTTTGATTGAATGGGGAGGATTGAGAAGACCAAAGCACTTAGGTTCTGGAATCTTTCCTTTTCATTATAATTCTCATTTCTGATAGTTGGGAGCAGGATGAGCTTAGAAGATTGTCAAGCACTTTGAGAATTGAGACCGTTGTTCCTTTTTCTACATAGTTAGGTGGTAGCTAGTAGCTAGTTCACTAACATGTCTTCACTCCCCTTTTTCCTCACAGTCCTATCTGAAGTTAATGCTGCTTGTATATTGATCTGAGTATATGGTTTTGAATATCAAATATAAGCAATCAGAATTAAGGATTGTTTTTAATAAGGCGTTGAAAGATTGGGAATTGAGTGCATGTATGTAGTCGTTTTGTTGATGCTCACAATCTTTGAGTGATATGTTTTTTTTGCAGTGCATGAAGTGTTTTTGGTTTGCGTGTTTTCTATCCGCAACGGATCTAAAAGCTTGTTTTGACCTAGCTAAGGAGAACAATGCAATGTTGTATTGTTCTGATTAGCAATGTCATATTAAAATATGCTTGGATATTCCCAGAGGAGTAGTGTGATTTATGATGTTGCTGTTTGCTTTCTGGTCCTTGGGTTGGCCTTCTGTTTGTTCTTCGTTACTAATACAAGGGGCAACTAAAATGTTCTTAAGCTTGTTTTGTTTTGTTTTGTTCGGGGAACATTTATTTTCTAATTTAGTTTTCTGATATTTCCCCTCTCTTTCTCTCTTGGTCCCTGCCCTACCTTTCCGGCCTCTTTCCTTTCCTCCACAAAGCAATTCGTGTATCTGTTTGTGTTGACTGTTGAGCGGGCTAGAAGTGAAGATACGTGGTTGGCTTATCATTCAACATTTTGCTTATGGTTGTTACTCTTGTCAATGTGGATTTCCAAAATTTATAGGATCATTGTATCTAACAACTTTCTTTTCTTTTGGTCAGCCACCACTTACTAGAAATCATATGCCCGCTGCACTGCTCCACCAATATCCGCAGAAAGCGAAATCACAAAAAAAGAAAGAAAACAAAGATGACCAACATTATGGACCATGTGAAATGTTGCGAACCCTTTTCTTTTTTTTTTAAGATAGAAAAACTTAGTCGAGTAAAAGATCCTTGAAATTGTGGTGGTTTAGTGCTTTTCATCATAAACACTCATTTGACTTGATCAGAATTTTTGGGCCTAATGATGATGGAAGATGCCCTTACAGAAACTTTTCTTGTTGCTTTGTTCTTCTATTTCTACCCTTCCCTGAATTCATGCTTTTACTAGGCTATTTTTAATATTTTCTATGTGAAATCTTCACTGCTGCGGACTTGTTCCTCGAC ATGATGACCGACAAAAAAGCGGCAGTATGCGTAACAGGAGCAAACGGGTTCATAGGCACATACCTAGTAAAGACCCTGATTGAATCCGGGTACACCACCATCCACTGCTCCATCTTCCCCAACTCCTCTTCCTCCCACCTTTTCTCTCTCTTCCCTTCCGCCTCCATTCGCATCTTCGAGGCTGATATCCTCGACTACGACGCCGTTTCGAGGGCTGTTGAAGGTTGTCACGGTGTGTTTCACGTGGCATCTCCTTGTACCTTAGAAGATCCCCGGGATCCACAAGCTGAGCTAGTGGACCCCGCTGTTAAAGGCACCCAGAACGTTCTAGAAGCTTCTAAGAATCACGGAGTAAGGCGGGTGGTGCTCACTTCCTCCATCTCTGCTATGGTTCCTAATTTTGCTTGGCCCACTTCTTTGCCTGTTGATGAGTCTTGTTGGACTGATATTAATTACTGCCGCTCTCACCAGAAATGGTACCCGGTATCTAAAACATTGGCAGAAAAAACTGCGTGGGAATTCTCACAAAAGCATGGATTAGATGTAGTGGGTATTAATCCAGGTACATGTCTTGGCCCGCTGTTGCAGCCAGGCTTGAATGCGAGCTGTGCTGTACTGCAGCAGCTGCTTCAGGGGTCAAAATACACTCAGGAATGCCACTGGCTAGGGGCAGTACATGTCAAAGATGTGGCAAGAGCTCAAGTCTTGCTGTTTGAGACCCCTGCTGTTTCTGGCCGCTACCTTTGCACCAATGGTATCTACCAGTTTGCTGATTTCGCTGCCATTGTCTCTCAACTCTTCCCAGAGTATCCAATTCACAGCCACCACTTACTAGAAATCATATGCCCGCTGCACTGCTCCACCAATATCCGCAGAAAGCGAAATCACAAAAAAAGAAAGAAAACAAAGATGACCAACATTATGGACCATGTGAAATGTTGCGAACCCTTTTCTTTTTTTTTTAAGATAGAAAAACTTAGTCGAGTAAAAGATCCTTGAAATTGTGGTGGTTTAGTGCTTTTCATCATAAACACTCATTTGACTTGATCAGAATTTTTGGGCCTAATGATGATGGAAGATGCCCTTACAGAAACTTTTCTTGTTGCTTTGTTCTTCTATTTCTACCCTTCCCTGAATTCATGCTTTTACTAGGCTATTTTTAATATTTTCTATGTGAAATCTTCACTGCTGCGGACTTGTTCCTCGAC ATGATGACCGACAAAAAAGCGGCAGTATGCGTAACAGGAGCAAACGGGTTCATAGGCACATACCTAGTAAAGACCCTGATTGAATCCGGGTACACCACCATCCACTGCTCCATCTTCCCCAACTCCTCTTCCTCCCACCTTTTCTCTCTCTTCCCTTCCGCCTCCATTCGCATCTTCGAGGCTGATATCCTCGACTACGACGCCGTTTCGAGGGCTGTTGAAGGTTGTCACGGTGTGTTTCACGTGGCATCTCCTTGTACCTTAGAAGATCCCCGGGATCCACAAGCTGAGCTAGTGGACCCCGCTGTTAAAGGCACCCAGAACGTTCTAGAAGCTTCTAAGAATCACGGAGTAAGGCGGGTGGTGCTCACTTCCTCCATCTCTGCTATGGTTCCTAATTTTGCTTGGCCCACTTCTTTGCCTGTTGATGAGTCTTGTTGGACTGATATTAATTACTGCCGCTCTCACCAGAAATGGTACCCGGTATCTAAAACATTGGCAGAAAAAACTGCGTGGGAATTCTCACAAAAGCATGGATTAGATGTAGTGGGTATTAATCCAGGTACATGTCTTGGCCCGCTGTTGCAGCCAGGCTTGAATGCGAGCTGTGCTGTACTGCAGCAGCTGCTTCAGGGGTCAAAATACACTCAGGAATGCCACTGGCTAGGGGCAGTACATGTCAAAGATGTGGCAAGAGCTCAAGTCTTGCTGTTTGAGACCCCTGCTGTTTCTGGCCGCTACCTTTGCACCAATGGTATCTACCAGTTTGCTGATTTCGCTGCCATTGTCTCTCAACTCTTCCCAGAGTATCCAATTCACAGCCACCACTTACTAGAAATCATATGCCCGCTGCACTGCTCCACCAATATCCGCAGAAAGCGAAATCACAAAAAAAGAAAGAAAACAAAGATGACCAACATTATGGACCATGTGAAATGTTGCGAACCCTTTTCTTTTTTTTTTAAGATAGAAAAACTTAGTCGAGTAAAAGATCCTTGA MMTDKKAAVCVTGANGFIGTYLVKTLIESGYTTIHCSIFPNSSSSHLFSLFPSASIRIFEADILDYDAVSRAVEGCHGVFHVASPCTLEDPRDPQAELVDPAVKGTQNVLEASKNHGVRRVVLTSSISAMVPNFAWPTSLPVDESCWTDINYCRSHQKWYPVSKTLAEKTAWEFSQKHGLDVVGINPGTCLGPLLQPGLNASCAVLQQLLQGSKYTQECHWLGAVHVKDVARAQVLLFETPAVSGRYLCTNGIYQFADFAAIVSQLFPEYPIHSHHLLEIICPLHCSTNIRRKRNHKKRKKTKMTNIMDHVKCCEPFSFFFKIEKLSRVKDP Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15049.1 vs. NCBI nr
Match: gi|731341811|ref|XP_010682084.1| (PREDICTED: tetraketide alpha-pyrone reductase 1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 470.7 bits (1210), Expect = 2.100e-129 Identity = 227/274 (82.85%), Postives = 245/274 (89.42%), Query Frame = 1
BLAST of Spo15049.1 vs. NCBI nr
Match: gi|225465312|ref|XP_002269382.1| (PREDICTED: tetraketide alpha-pyrone reductase 1 [Vitis vinifera]) HSP 1 Score: 418.7 bits (1075), Expect = 9.500e-114 Identity = 199/271 (73.43%), Postives = 236/271 (87.08%), Query Frame = 1
BLAST of Spo15049.1 vs. NCBI nr
Match: gi|802640506|ref|XP_012078847.1| (PREDICTED: cinnamoyl-CoA reductase 2 [Jatropha curcas]) HSP 1 Score: 417.5 bits (1072), Expect = 2.100e-113 Identity = 198/278 (71.22%), Postives = 232/278 (83.45%), Query Frame = 1
BLAST of Spo15049.1 vs. NCBI nr
Match: gi|566168361|ref|XP_006385106.1| (cinnamoyl-CoA reductase family protein [Populus trichocarpa]) HSP 1 Score: 417.5 bits (1072), Expect = 2.100e-113 Identity = 197/276 (71.38%), Postives = 231/276 (83.70%), Query Frame = 1
BLAST of Spo15049.1 vs. NCBI nr
Match: gi|659102538|ref|XP_008452186.1| (PREDICTED: cinnamoyl-CoA reductase 1 [Cucumis melo]) HSP 1 Score: 416.4 bits (1069), Expect = 4.700e-113 Identity = 195/273 (71.43%), Postives = 233/273 (85.35%), Query Frame = 1
BLAST of Spo15049.1 vs. UniProtKB/TrEMBL
Match: D7TGJ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g02070 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 6.600e-114 Identity = 199/271 (73.43%), Postives = 236/271 (87.08%), Query Frame = 1
BLAST of Spo15049.1 vs. UniProtKB/TrEMBL
Match: A0A067K8K9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13372 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 1.500e-113 Identity = 198/278 (71.22%), Postives = 232/278 (83.45%), Query Frame = 1
BLAST of Spo15049.1 vs. UniProtKB/TrEMBL
Match: U5GHC7_POPTR (Cinnamoyl-CoA reductase family protein OS=Populus trichocarpa GN=POPTR_0004s23980g PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 1.500e-113 Identity = 197/276 (71.38%), Postives = 231/276 (83.70%), Query Frame = 1
BLAST of Spo15049.1 vs. UniProtKB/TrEMBL
Match: A0A0A1CBW1_BETPL (Cinnamoyl-CoA reductase 1 OS=Betula platyphylla PE=2 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 1.600e-112 Identity = 196/270 (72.59%), Postives = 226/270 (83.70%), Query Frame = 1
BLAST of Spo15049.1 vs. UniProtKB/TrEMBL
Match: B9S058_RICCO (Cinnamoyl-CoA reductase, putative OS=Ricinus communis GN=RCOM_1298930 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 2.800e-112 Identity = 195/277 (70.40%), Postives = 233/277 (84.12%), Query Frame = 1
BLAST of Spo15049.1 vs. ExPASy Swiss-Prot
Match: TKPR1_ARATH (Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=1 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.100e-50 Identity = 106/278 (38.13%), Postives = 169/278 (60.79%), Query Frame = 1
BLAST of Spo15049.1 vs. ExPASy Swiss-Prot
Match: CCR1_ARATH (Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 9.700e-50 Identity = 110/266 (41.35%), Postives = 162/266 (60.90%), Query Frame = 1
BLAST of Spo15049.1 vs. ExPASy Swiss-Prot
Match: CCR2_ARATH (Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 4.800e-49 Identity = 109/274 (39.78%), Postives = 163/274 (59.49%), Query Frame = 1
BLAST of Spo15049.1 vs. ExPASy Swiss-Prot
Match: TKPR2_ARATH (Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=1 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 6.300e-41 Identity = 92/269 (34.20%), Postives = 144/269 (53.53%), Query Frame = 1
BLAST of Spo15049.1 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.000e-38 Identity = 96/280 (34.29%), Postives = 154/280 (55.00%), Query Frame = 1
BLAST of Spo15049.1 vs. TAIR (Arabidopsis)
Match: AT2G02400.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 399.4 bits (1025), Expect = 2.100e-111 Identity = 187/269 (69.52%), Postives = 225/269 (83.64%), Query Frame = 1
BLAST of Spo15049.1 vs. TAIR (Arabidopsis)
Match: AT5G58490.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 279.6 bits (714), Expect = 2.400e-75 Identity = 136/276 (49.28%), Postives = 191/276 (69.20%), Query Frame = 1
BLAST of Spo15049.1 vs. TAIR (Arabidopsis)
Match: AT5G19440.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 210.3 bits (534), Expect = 1.800e-54 Identity = 116/269 (43.12%), Postives = 169/269 (62.83%), Query Frame = 1
BLAST of Spo15049.1 vs. TAIR (Arabidopsis)
Match: AT1G51410.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 208.4 bits (529), Expect = 6.900e-54 Identity = 116/277 (41.88%), Postives = 174/277 (62.82%), Query Frame = 1
BLAST of Spo15049.1 vs. TAIR (Arabidopsis)
Match: AT1G09510.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 203.4 bits (516), Expect = 2.200e-52 Identity = 117/276 (42.39%), Postives = 172/276 (62.32%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15049.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15049.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15049.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo15049.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
|