Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTGCGTGATATTTAGACCAGCCATATGATTATAATGTCTAATGTTTATCCCAAACCAGTGACGTTATTGCCGTCTATAAATTAAAACCATCAATCACAATTCACAACTTACAGAAAGCACACAAAATATCAGAAAAGCTAAAAAGCATGGAATCAAAAGATATGAATCAAACGGTGAAGATAGATAAGTATAGGTCTTTCTTGCATGAAGATGCAAAGAACGATAATATAGTTTGGAGGCATGGTGCTCCACCAACGTATGATGATGTCAACAAACTCTTTGAACAAGGCAGGACAAAGGTTAGCCCTTTTTATTACCCTACAAATTAACTAGTAGAGGTTGTATATATATTTAATAATTTGTTAATTATATGGTTTTGTTAATTAATCAAAGAGATTAATTGTATATTTGTATGTGAGACAGGAATGGGCAAAAGGGTCATTAGAAGAGACGGTTCAAAATGCAATCAAGTCATGGGAGATGGAGCTTTCTCACAAACCTCGTTTGCAAGATTTTCACACCATAAATCCTCAAAAGTTCAAGCTCTTTGTTAATGGTAATTATTATTATTTTATATTATCATTATTGCATTTGACTCAAGTGATCCTTTCATTTTCGTTGTGACATAAGGAATTTTTTTTTTTAATTGTAAAATATAAGTAATTTCACTATAAGATGGCCCTTTTTGACTCTTTTCCTACTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTTTTTTTTTTTTTTTTTTATCATTTTTGTTATGAAATATAATACGTAGTACGAACTATATATGTATCAACTAGCTTTTTTAGCGGACCGTCTAATAATTACTGGATGTAAAATTATATTTAGGCCTATTTCCGTTTTAAAATGACTTTTACATTTTTTTTTTATTCCGTTTTATAATACTTTATAATTGCATGTTGGTTTAGTGGTGATTGAGGCTGAACTTGGTAGGGAGAACCTGTGTTTGATATCCCGTAATAACAATTGGGAGGGGACTGGAACCTATCCACCCAGACCTTGCCCCGAATCCGAATTAGCCCTAAGGGTGAATCAGGTGCTAATTAATACCAAAAAAAATAATATTATAATTGCTTTATTTATTTTTTGACATGAAAATTTACCACTTACTTTTCTTACCCCATAATATTTATAATTTTTCACCCACTTTCTCTTAATTTATTTATTTATTTTGCACTTACTCACCTTTTTTGCACATAATTTTTCACCCACTTTCTCTTAAATTTTGCATACATCATATAAATTCATTTTTATTAATACCATTTATAATCGGCTAGCAAGCGAGTCGTACGTGAATCTGTCAAATAAATATGCATAGATCACTAATTAAATTGAAACAGCAATATCAAATTAAAGTCTTACGGAGTTACCGACAGCTTAATATCTTAAGCACATGATTCCTTAAAAAAAAAACTGTGGAAATAATCATAGTACCGTACTGTATTAAACTATTAGTATTAATTAAAATGTCATCTCCAACAACCTTAAAATGAATCCCATAAAATGTTGCATCATGTTAGCTAGGTTGTCATGTGGATTGTAGCCTTGTAGGTTGTCCACTAATATTGTCTATGTCATTACATATCCTTACTCAGTAAGGCGATGTTATTCTGAATTTTAATTGGTTGTACTTAACAGAATAATAATAAATAAATAAAGAAAGAAAGAAAGAAATAGTAGTAATATACCCCTTATAAGTAATAACTAGCTTTTTGGGCCTGGGTGATGCCCCGAATTACTACATTAACAACATTCACATTTACTTATACTTCATCCGTTCCGAAAATATCGCACCATGATTGACTTTTACTCCTCTAACAATTACTTTGACTCTTAATATCTCAAATCGTATGCAAGTAAAAATTATAAAAAATTAATATTTAGAAAATATATGTCGATATGATCTAACATGACCCCATATGACTAAAATTTCCTTATATAAGAATCACGAAAAATGGCCAAAGTCATAGTGTAAAGATTGTAAAAAATAAATGGTGCTATATTTCAGGAACGGTTGAAGTATTACTTTTTCTCCGTTACATAAAACACGTAATAGTTTAGTGGTAAAAACTTTATTGTTTAAACTCAAGGCCATAGGTTCAAACCTTACTCGAACCATGTTGGAACGAATATAGACTCCTTTTAATATATAGTTTAGATAATGATAATAATTTCAATATCAAGAATAGAAATATATATGAAAAAATGATGATCCCATTCTTTATAACTGAATATAGCTGAACTAAATAGTTTATTTTATCTTAATATTTGTGCAAATAGTAACCGTAAAAATCATTTTGAAACAGAATAGTTGGTTTTTAGGGTGAGACGAGGCGATCAAATGTCTATAATAAGATGTAGAAAATTAAATAATTTAAGTGCATGCTTGATTGGTGCAAATGGATATTAACTTGCAATTGAAAGTTATATTTTATGTAAAAATAATTACCTTTTAAAGAAAATACTACCTCTGTTTCAAAAAGATCTTTACGATTATTACGTGCACACGTATTACTCCATCTGTATTTAAATAGGAGTCATATATGGCCGGGCACGGATATTAAGGAAGAATAGTTGAATGAAATAAAATAATAAAGCAAGTGGGGTAGAGGTGAATATTTTAATCAAGTAAAACAAGCGGGGACTATTAAATTTTAGAGGGATGGGCGGTTTTGAAATTAATTGTTTAATGGGGTGGTGTATCATAAGGTAAATTAGATATATTATTTAATTAGATGGCGGGGTAGAAAAAAATACTCCCTCTGTCCCAGATTAGTTGTTACACTTTCCTTTTTTGTCCGTCCCAAATTAGTTGTTACACTTCTAAATAAGGAATGACCCAACAATTATTATATTGTCTCTCTCTTCCCACTAAATTTATTTTTGTCCCCACACCATCTCTCATTCAATTAAAAAAATACCCATTAACTCCTATCACATCTACTTTTTCAATAAAATAACAATTGATAACCAAACAACACTTATCACCTTAAACTTTGTGCAAAGGTAAGTGTAACAACTAATCTGTGACGGAGGGAGTACTAAAAATGGAAGTGTGGCCTCTAATAAAATACAGCTGGAAATGGTAAGTGTGTCTCCTAATAAAATACAGAGGGACTAAGGCAAAAGTGAAAAAGCTGGTTGAATATAATAGAATATGGATAAAGTAAGAGAAATGTGCAAAAATGTGAGTGCGTGTAAAAAAAAATGAATGAAGTGAGAGAAAGTGGGTGAGAAATTGTAAATCTTGTGGGATGGGAAGGGTATGATAGTAAATTTTCATGTCCAAAATAGAATAAGGCAAAGTGTAAAAAACATTATGAAACATACTAAAACGGAAATTGTAAATATCATTTTGAAACGGAGGTAGTAGTTTGATAGTGTTTGGTTGACACTCAAACGTTGGTATTTTACGAGACTTGATATGAAAATTGTGACTTACTATTATAAGAGAGGGTTAATTGTAAGTTAAGTCACTTCTCATGTTCAAGAGGAACTTCAATTCCTAAGTGTGAAATTCATTAACCACCCCATTTCATTACAATCAAACAACTAATCATAACCAAGTTAAGGGCCTCTTGCTCCTTAACCAAGGTCTCGATTTCGAGCCTTGGGTATGGAAAAAATCTCAACTGAAATACTGCCCATCGAAATATCCATGAAAACTCCCGCAAAAAATTAGTGCACTCGCCGAATACGGTGGAAACCGGGAACTCCCCGTAATATAGTAGAACCAAAAAAAACAACAACTAATCATGTAAGGATTATATATATGCACACTTTCCCTCTATTTGTTTGCGACCAAAAACTAGTAAATATATTTTTTGTTTTGTTTTGTCAATTGATAACATTTATTGGTTGTCTTATTTTACAAATAGGCCAGAGCTACTAATTAATTCGACATTAATTATTATTGCTTATTTTTTGACTCTATTTGTCTAATTTAAGGTTATTTATCATTTATTTATAATTGAAGGAATGATATTGTAAAGCTAAAGCTATAAATAAACTTGTGAATATACTACGTTACGTTACGTAGGTAGGGAAGGTTTATCTGGAGAGGAAGCCCTTAAGATAGGAAGCTATAATGCATTGCTAAAGACTTCATTACCTAACAACTTCCAATACTACAAAGCTGATGAAGAAAGCTTTGAATCATCTCATCAAGTATTCCGGTCGGCATTTCCCCGTGGTTTTGCATGGGAGGTTATATGTGTTTATTCAGGACCACCAAGTATTGCTTTCAAGTTCAGGCATTGGGGTTTCTTTGAAGGCCCTTTCAAAGCTCATGCTCCTACCGGTCATATGCTCCAGTTTTATGGTCTTGCCATTCTTAAGGTATCAATATTACTCTCCGGTCTATCGTTCTTTCAATCTTTATAGAGTACTCTTAATCATGGGCGGATCTTGAACACTTTCACGAGGGGGGCCGGTAGAAAAAATTAAGCAATATACTATGTAATTATACAATTATATATACACAAATTTTATAAGTGATACTTAAAAAAAACAATTTCCATGCATTTGTACGTCCATGATCAAACACTAGTGGCATGTATAATTTCGTTGTATGAATTACACTGAAATCAATCTTAATTTTTTTTTATATATTCAATTACTCGTATTAATTTTGGTCATTATTGATATATGATTATGTATTTATGATGTGTACGTAGGTAGATGAATCTCTACGTGTAGAGGATGTGGAGATCTATTATGATCCAGCTGAATTATTTGGAGGGCTTTTGAAAGGAGAAGCATCTCTTGGTTCTGGTTGTCCTTTGGGACATTAATTGAACTTGTTATTGTTTGAATTCCCTATAAATAAGAAATTGTTTCTAAATAATAGCAAGTTGTGCCACATAATAATCATCATATTTTGGTTTACTTTTATCAAATTCCAAATATGCTTTTGATGGATTTAAGTGTAGTCAAGTACTACAAGAAAATGTTATACACATAGTCATCGAAGATAAATCTAAACTGTAGCACAATAGTGTGTTTTATTTGTTTAGTTTGTTAGCAATGTATGTATTTGTCTTTAAAAGTATCAATCAATTATTCCTTGAAA ATCTTGCGTGATATTTAGACCAGCCATATGATTATAATGTCTAATGTTTATCCCAAACCAGTGACGTTATTGCCGTCTATAAATTAAAACCATCAATCACAATTCACAACTTACAGAAAGCACACAAAATATCAGAAAAGCTAAAAAGCATGGAATCAAAAGATATGAATCAAACGGTGAAGATAGATAAGTATAGGTCTTTCTTGCATGAAGATGCAAAGAACGATAATATAGTTTGGAGGCATGGTGCTCCACCAACGTATGATGATGTCAACAAACTCTTTGAACAAGGCAGGACAAAGGAATGGGCAAAAGGGTCATTAGAAGAGACGGTTCAAAATGCAATCAAGTCATGGGAGATGGAGCTTTCTCACAAACCTCGTTTGCAAGATTTTCACACCATAAATCCTCAAAAGTTCAAGCTCTTTGTTAATGGTAGGGAAGGTTTATCTGGAGAGGAAGCCCTTAAGATAGGAAGCTATAATGCATTGCTAAAGACTTCATTACCTAACAACTTCCAATACTACAAAGCTGATGAAGAAAGCTTTGAATCATCTCATCAAGTATTCCGGTCGGCATTTCCCCGTGGTTTTGCATGGGAGGTTATATGTGTTTATTCAGGACCACCAAGTATTGCTTTCAAGTTCAGGCATTGGGGTTTCTTTGAAGGCCCTTTCAAAGCTCATGCTCCTACCGGTCATATGCTCCAGTTTTATGGTCTTGCCATTCTTAAGGTAGATGAATCTCTACGTGTAGAGGATGTGGAGATCTATTATGATCCAGCTGAATTATTTGGAGGGCTTTTGAAAGGAGAAGCATCTCTTGGTTCTGGTTGTCCTTTGGGACATTAATTGAACTTGTTATTGTTTGAATTCCCTATAAATAAGAAATTGTTTCTAAATAATAGCAAGTTGTGCCACATAATAATCATCATATTTTGGTTTACTTTTATCAAATTCCAAATATGCTTTTGATGGATTTAAGTGTAGTCAAGTACTACAAGAAAATGTTATACACATAGTCATCGAAGATAAATCTAAACTGTAGCACAATAGTGTGTTTTATTTGTTTAGTTTGTTAGCAATGTATGTATTTGTCTTTAAAAGTATCAATCAATTATTCCTTGAAA ATGGAATCAAAAGATATGAATCAAACGGTGAAGATAGATAAGTATAGGTCTTTCTTGCATGAAGATGCAAAGAACGATAATATAGTTTGGAGGCATGGTGCTCCACCAACGTATGATGATGTCAACAAACTCTTTGAACAAGGCAGGACAAAGGAATGGGCAAAAGGGTCATTAGAAGAGACGGTTCAAAATGCAATCAAGTCATGGGAGATGGAGCTTTCTCACAAACCTCGTTTGCAAGATTTTCACACCATAAATCCTCAAAAGTTCAAGCTCTTTGTTAATGGTAGGGAAGGTTTATCTGGAGAGGAAGCCCTTAAGATAGGAAGCTATAATGCATTGCTAAAGACTTCATTACCTAACAACTTCCAATACTACAAAGCTGATGAAGAAAGCTTTGAATCATCTCATCAAGTATTCCGGTCGGCATTTCCCCGTGGTTTTGCATGGGAGGTTATATGTGTTTATTCAGGACCACCAAGTATTGCTTTCAAGTTCAGGCATTGGGGTTTCTTTGAAGGCCCTTTCAAAGCTCATGCTCCTACCGGTCATATGCTCCAGTTTTATGGTCTTGCCATTCTTAAGGTAGATGAATCTCTACGTGTAGAGGATGTGGAGATCTATTATGATCCAGCTGAATTATTTGGAGGGCTTTTGAAAGGAGAAGCATCTCTTGGTTCTGGTTGTCCTTTGGGACATTAA MESKDMNQTVKIDKYRSFLHEDAKNDNIVWRHGAPPTYDDVNKLFEQGRTKEWAKGSLEETVQNAIKSWEMELSHKPRLQDFHTINPQKFKLFVNGREGLSGEEALKIGSYNALLKTSLPNNFQYYKADEESFESSHQVFRSAFPRGFAWEVICVYSGPPSIAFKFRHWGFFEGPFKAHAPTGHMLQFYGLAILKVDESLRVEDVEIYYDPAELFGGLLKGEASLGSGCPLGH Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15366.1 vs. NCBI nr
Match: gi|902177681|gb|KNA08989.1| (hypothetical protein SOVF_156690 [Spinacia oleracea]) HSP 1 Score: 490.7 bits (1262), Expect = 1.400e-135 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Spo15366.1 vs. NCBI nr
Match: gi|731328974|ref|XP_010675339.1| (PREDICTED: pathogen-related protein-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 425.6 bits (1093), Expect = 5.500e-116 Identity = 206/246 (83.74%), Postives = 214/246 (86.99%), Query Frame = 1
BLAST of Spo15366.1 vs. NCBI nr
Match: gi|661890527|emb|CDP06024.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 367.1 bits (941), Expect = 2.300e-98 Identity = 171/233 (73.39%), Postives = 191/233 (81.97%), Query Frame = 1
BLAST of Spo15366.1 vs. NCBI nr
Match: gi|225461699|ref|XP_002285489.1| (PREDICTED: pathogen-related protein [Vitis vinifera]) HSP 1 Score: 366.3 bits (939), Expect = 3.900e-98 Identity = 173/224 (77.23%), Postives = 187/224 (83.48%), Query Frame = 1
BLAST of Spo15366.1 vs. NCBI nr
Match: gi|848854597|ref|XP_012848966.1| (PREDICTED: pathogen-related protein isoform X2 [Erythranthe guttata]) HSP 1 Score: 365.5 bits (937), Expect = 6.700e-98 Identity = 170/218 (77.98%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Spo15366.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNZ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_156690 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 9.600e-136 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Spo15366.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIC2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g085650 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 3.800e-116 Identity = 206/246 (83.74%), Postives = 214/246 (86.99%), Query Frame = 1
BLAST of Spo15366.1 vs. UniProtKB/TrEMBL
Match: A0A068UCV3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021370001 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 1.600e-98 Identity = 171/233 (73.39%), Postives = 191/233 (81.97%), Query Frame = 1
BLAST of Spo15366.1 vs. UniProtKB/TrEMBL
Match: A5BUS4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01180 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 2.700e-98 Identity = 173/224 (77.23%), Postives = 187/224 (83.48%), Query Frame = 1
BLAST of Spo15366.1 vs. UniProtKB/TrEMBL
Match: A0A022RWY1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012837mg PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 4.700e-98 Identity = 170/218 (77.98%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Spo15366.1 vs. ExPASy Swiss-Prot
Match: PRPX_HORVU (Pathogen-related protein OS=Hordeum vulgare PE=2 SV=2) HSP 1 Score: 231.1 bits (588), Expect = 1.200e-59 Identity = 112/223 (50.22%), Postives = 145/223 (65.02%), Query Frame = 1
BLAST of Spo15366.1 vs. TAIR (Arabidopsis)
Match: AT1G78780.2 (pathogenesis-related family protein) HSP 1 Score: 331.3 bits (848), Expect = 4.900e-91 Identity = 156/209 (74.64%), Postives = 175/209 (83.73%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15366.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15366.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15366.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo15366.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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