Spo15475 (gene)

Overview
NameSpo15475
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H2A
LocationSpoScf_04993 : 5210 .. 6145 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCAGCAGGAAAGGGGAAGAAGGGAGCTGGAGGAAGGAAAGGAGGTGGTCCGAAGAAGAAGCCAGTTACAAGGTCGGTAAGAGCTGGATTGCAGTTTCCAGTTGGTAGGATCGGAAGGTTTTTGAAGAAAGGGAGGTATGCTCAACGTGTTGGTACTGGTGCCCCCGTTTACTTGGCTGCTGTTCTTGAGTACCTTGCTGCTGAGGTACTCCTTCAATTTCCATCTCTTTTGGTTGTTTTAATTTAATTTTGACTTTTTGAAATTTCGTTTGAATGAGTTTGGAGGTTTTGATTTGGGGGTTTTGGTTGTTTGGTGTTGTATTTCTGTTGGTCGATTTTGGATTAAGTTAGTTGTAATGGTTTTTGCCTTTGGTGACGAGATTTGGAATGTTTAATGTAAGGGTTTGGATTGGTTTGAATTTATGATTTGGGTTTTTTTTGTTGTTGATTTTACATTTTGGTTGCTTGATTTTGGAATACAAATGATTTTTATGGTTATTGATTTATGCAGATCTCTTATGGATTCTGAGATGATACTTGTATTTTCGTTCTTAATTACAAATGTAAAAAATGGATGGTTGATTTGGCTAATCCGTTGCCTGTAGATTGACACCTGCCTTAAGCCTTTGCCCTGGATATCAATAAATTAGATTTGATTGCTAATTTCTATTGTCCTGTGTTTGTGTAGGTGTTGGAATTGGCTGGAAATGCTGCAAGGGACAACAAGAAGACCAGAATCATCCCAAGGCATGTTTTACTAGCTGTGAGAAACGATGATGAGCTCGGAAAGCTTCTTGCCGGAGTCACCATTGCACATGGAGGAGTTCTTCCAAACATAAACCCAGTGTTGTTGCCAAAGAAGGTTGCAGAGAAGTCTCCAAAGGAGCCCAAATCTCCTTCTAAGGCTACCAAGTCCCCCAAGAAAGCATAG

mRNA sequence

ATGGATTCAGCAGGAAAGGGGAAGAAGGGAGCTGGAGGAAGGAAAGGAGGTGGTCCGAAGAAGAAGCCAGTTACAAGGTCGGTAAGAGCTGGATTGCAGTTTCCAGTTGGTAGGATCGGAAGGTTTTTGAAGAAAGGGAGGTATGCTCAACGTGTTGGTACTGGTGCCCCCGTTTACTTGGCTGCTGTTCTTGAGTACCTTGCTGCTGAGGTGTTGGAATTGGCTGGAAATGCTGCAAGGGACAACAAGAAGACCAGAATCATCCCAAGGCATGTTTTACTAGCTGTGAGAAACGATGATGAGCTCGGAAAGCTTCTTGCCGGAGTCACCATTGCACATGGAGGAGTTCTTCCAAACATAAACCCAGTGTTGTTGCCAAAGAAGGTTGCAGAGAAGTCTCCAAAGGAGCCCAAATCTCCTTCTAAGGCTACCAAGTCCCCCAAGAAAGCATAG

Coding sequence (CDS)

ATGGATTCAGCAGGAAAGGGGAAGAAGGGAGCTGGAGGAAGGAAAGGAGGTGGTCCGAAGAAGAAGCCAGTTACAAGGTCGGTAAGAGCTGGATTGCAGTTTCCAGTTGGTAGGATCGGAAGGTTTTTGAAGAAAGGGAGGTATGCTCAACGTGTTGGTACTGGTGCCCCCGTTTACTTGGCTGCTGTTCTTGAGTACCTTGCTGCTGAGGTGTTGGAATTGGCTGGAAATGCTGCAAGGGACAACAAGAAGACCAGAATCATCCCAAGGCATGTTTTACTAGCTGTGAGAAACGATGATGAGCTCGGAAAGCTTCTTGCCGGAGTCACCATTGCACATGGAGGAGTTCTTCCAAACATAAACCCAGTGTTGTTGCCAAAGAAGGTTGCAGAGAAGTCTCCAAAGGAGCCCAAATCTCCTTCTAAGGCTACCAAGTCCCCCAAGAAAGCATAG

Protein sequence

MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNINPVLLPKKVAEKSPKEPKSPSKATKSPKKA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15475.1Spo15475.1mRNA


Homology
[Close]
BLAST of Spo15475.1 vs. NCBI nr
Match: gi|902232644|gb|KNA22742.1| (hypothetical protein SOVF_031700 [Spinacia oleracea])

HSP 1 Score: 282.3 bits (721), Expect = 4.800e-73
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL
Sbjct: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKKVAEKSPKEPKSPSKATKSPKKA
Sbjct: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 150
[Close]
BLAST of Spo15475.1 vs. NCBI nr
Match: gi|1012220569|ref|XP_015935637.1| (PREDICTED: histone H2A [Arachis duranensis])

HSP 1 Score: 261.2 bits (666), Expect = 1.100e-66
Identity = 138/150 (92.00%), Postives = 145/150 (96.67%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD+A K KKGAGGRKGGGPKKKPV+RSV+AGLQFPVGRIGR+LKKGRY+QRVGTGAPVYL
Sbjct: 1   MDAASKVKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKK AEK+PKE KSPSKATKSPKKA
Sbjct: 121 NPVLLPKKTAEKAPKEKKSPSKATKSPKKA 150
[Close]
BLAST of Spo15475.1 vs. NCBI nr
Match: gi|1021559830|ref|XP_016171199.1| (PREDICTED: histone H2A [Arachis ipaensis])

HSP 1 Score: 261.2 bits (666), Expect = 1.100e-66
Identity = 138/150 (92.00%), Postives = 145/150 (96.67%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD+A K KKGAGGRKGGGPKKKPV+RSV+AGLQFPVGRIGR+LKKGRY+QRVGTGAPVYL
Sbjct: 1   MDAASKVKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKK AEK+PKE KSPSKATKSPKKA
Sbjct: 121 NPVLLPKKTAEKAPKETKSPSKATKSPKKA 150
[Close]
BLAST of Spo15475.1 vs. NCBI nr
Match: gi|920701047|gb|KOM44272.1| (hypothetical protein LR48_Vigan05g187700 [Vigna angularis])

HSP 1 Score: 259.2 bits (661), Expect = 4.400e-66
Identity = 140/150 (93.33%), Postives = 144/150 (96.00%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD+ GK KKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYL
Sbjct: 1   MDAGGKIKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKK  EK+ KEPKSPSKATKSPKKA
Sbjct: 121 NPVLLPKK-TEKASKEPKSPSKATKSPKKA 149
[Close]
BLAST of Spo15475.1 vs. NCBI nr
Match: gi|950957032|ref|XP_014496972.1| (PREDICTED: histone H2A [Vigna radiata var. radiata])

HSP 1 Score: 259.2 bits (661), Expect = 4.400e-66
Identity = 140/150 (93.33%), Postives = 144/150 (96.00%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD+ GK KKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYL
Sbjct: 1   MDTGGKIKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKK  EK+ KEPKSPSKATKSPKKA
Sbjct: 121 NPVLLPKK-TEKASKEPKSPSKATKSPKKA 149
[Close]
BLAST of Spo15475.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV94_SPIOL (Histone H2A OS=Spinacia oleracea GN=SOVF_031700 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.400e-73
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL
Sbjct: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKKVAEKSPKEPKSPSKATKSPKKA
Sbjct: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 150
[Close]
BLAST of Spo15475.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UNW1_PHAAN (Histone H2A OS=Phaseolus angularis GN=LR48_Vigan05g187700 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.000e-66
Identity = 140/150 (93.33%), Postives = 144/150 (96.00%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD+ GK KKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYL
Sbjct: 1   MDAGGKIKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKK  EK+ KEPKSPSKATKSPKKA
Sbjct: 121 NPVLLPKK-TEKASKEPKSPSKATKSPKKA 149
[Close]
BLAST of Spo15475.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SGE5_PHAAN (Histone H2A OS=Vigna angularis var. angularis GN=Vigan.07G052800 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.000e-66
Identity = 140/150 (93.33%), Postives = 144/150 (96.00%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD+ GK KKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYL
Sbjct: 1   MDAGGKIKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKK  EK+ KEPKSPSKATKSPKKA
Sbjct: 121 NPVLLPKK-TEKASKEPKSPSKATKSPKKA 149
[Close]
BLAST of Spo15475.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SGH4_PHAAN (Histone H2A OS=Vigna angularis var. angularis GN=Vigan.07G052700 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.000e-66
Identity = 140/150 (93.33%), Postives = 143/150 (95.33%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD  GK KKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYL
Sbjct: 1   MDGGGKIKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKK  EK+ KEPKSPSKATKSPKKA
Sbjct: 121 NPVLLPKK-TEKASKEPKSPSKATKSPKKA 149
[Close]
BLAST of Spo15475.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UND9_PHAAN (Histone H2A OS=Phaseolus angularis GN=LR48_Vigan05g187800 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.000e-66
Identity = 140/150 (93.33%), Postives = 143/150 (95.33%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD  GK KKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYL
Sbjct: 1   MDGGGKIKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKK  EK+ KEPKSPSKATKSPKKA
Sbjct: 121 NPVLLPKK-TEKASKEPKSPSKATKSPKKA 149
[Close]
BLAST of Spo15475.1 vs. ExPASy Swiss-Prot
Match: H2A_PETCR (Histone H2A OS=Petroselinum crispum PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.800e-65
Identity = 134/150 (89.33%), Postives = 142/150 (94.67%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           M++AGK KKG GGRKGG P+KK VTRSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYL
Sbjct: 1   METAGKAKKGFGGRKGG-PRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKTRIIPRH+LLAVRND+ELGKLLAGVT AHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPKK AEK+ KEPKSPSKA KSPKKA
Sbjct: 121 NPVLLPKKTAEKAAKEPKSPSKAGKSPKKA 149
[Close]
BLAST of Spo15475.1 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.100e-64
Identity = 134/153 (87.58%), Postives = 141/153 (92.16%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD+  K KKGAG RKGGGPKKKPV+RSV+AGLQFPVGRIGRFLKKGRYAQRVG+GAPVYL
Sbjct: 1   MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPK---KVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPK   K A  + KEPKSP+KATKSPKKA
Sbjct: 121 NPVLLPKKAEKAAAAATKEPKSPAKATKSPKKA 153
[Close]
BLAST of Spo15475.1 vs. ExPASy Swiss-Prot
Match: H2A1_PEA (Histone H2A.1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.200e-62
Identity = 128/150 (85.33%), Postives = 137/150 (91.33%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD++ K KKGAGGRKGGGP+KK VTRSVRAGLQFPVGR+GRFLKKGRYAQRVGTGAPVYL
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RI PRH+LLAVRND+ELGKLLAGVTIA+GGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDEELGKLLAGVTIAYGGVLPNI 120

Query: 121 NPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           NPVLLPK+    +   PKSPSKA KSPKKA
Sbjct: 121 NPVLLPKRKENAAASTPKSPSKAKKSPKKA 150
[Close]
BLAST of Spo15475.1 vs. ExPASy Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.900e-62
Identity = 132/153 (86.27%), Postives = 139/153 (90.85%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYL 60
           MD++ K KKGAGGRKGGGP+KK VTRS+RAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYL
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKK RIIPRHVLLAVRND+ELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKVAEKS--PKEPKSPS-KATKSPKKA 151
           NPVLLPKK    +   KEPKSP  KA KSPKKA
Sbjct: 121 NPVLLPKKTERSNTVSKEPKSPKPKAGKSPKKA 153
[Close]
BLAST of Spo15475.1 vs. ExPASy Swiss-Prot
Match: H2A_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.100e-61
Identity = 129/152 (84.87%), Postives = 137/152 (90.13%), Query Frame = 1 

		  

Query: 3   SAGKGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAA 62
           + GKGKKGA GRK GGP+KK V+RSV+AGLQFPVGRIGR+LKKGRYAQ VGTGAPVYLAA
Sbjct: 8   AGGKGKKGAAGRKVGGPRKKSVSRSVKAGLQFPVGRIGRYLKKGRYAQXVGTGAPVYLAA 67

Query: 63  VLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNINP 122
           VLEYLAAEVLELAGNAARDNKKTRIIPRHVLLA+RND+ELGKLL GVTIAHGGVLPNINP
Sbjct: 68  VLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINP 127

Query: 123 VLLPKKVAEKS----PKEPKSPSKATKSPKKA 151
           VLLPKK AEK+     KE KSP KA KSPKKA
Sbjct: 128 VLLPKKTAEKASSGGSKEAKSPKKAAKSPKKA 159
[Close]
BLAST of Spo15475.1 vs. TAIR (Arabidopsis)
Match: AT5G02560.2 (histone H2A 12)

HSP 1 Score: 217.6 bits (553), Expect = 5.100e-57
Identity = 127/177 (71.75%), Postives = 138/177 (77.97%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRK-GGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVY 60
           MDS  K KKGA GR+ GGGPKKKPV+RSV++GLQFPVGRIGR+LKKGRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAE------------------------VLELAGNAARDNKKTRIIPRHVLLA 120
           LAAVLEYLAAE                        VLELAGNAARDNKK RIIPRHVLLA
Sbjct: 61  LAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLA 120

Query: 121 VRNDDELGKLLAGVTIAHGGVLPNINPVLLPKK--VAEKSPKEPKSPSKATKSPKKA 151
           VRND+ELG LL GVTIAHGGVLPNINP+LLPKK   A  + K PKSPSKATKSPKK+
Sbjct: 121 VRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 177
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BLAST of Spo15475.1 vs. TAIR (Arabidopsis)
Match: AT5G59870.1 (histone H2A 6)

HSP 1 Score: 206.5 bits (524), Expect = 1.200e-53
Identity = 116/151 (76.82%), Postives = 129/151 (85.43%), Query Frame = 1 

		  

Query: 1   MDSAGKGKKGAGGRKG-GGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVY 60
           M+S GK KK  GGRK  G PK K V++S++AGLQFPVGRI RFLKKGRYAQR+G GAPVY
Sbjct: 1   MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPN 120
           +AAVLEYLAAEVLELAGNAARDNKK+RIIPRH+LLA+RND+ELGKLL+GVTIAHGGVLPN
Sbjct: 61  MAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPN 120

Query: 121 INPVLLPKKVAEKSPKEPKSPSKATKSPKKA 151
           IN VLLPKK A K P E K+     KSPKKA
Sbjct: 121 INSVLLPKKSATK-PAEEKATKSPVKSPKKA 150
[Close]
BLAST of Spo15475.1 vs. TAIR (Arabidopsis)
Match: AT5G27670.1 (histone H2A 7)

HSP 1 Score: 192.6 bits (488), Expect = 1.800e-49
Identity = 109/145 (75.17%), Postives = 122/145 (84.14%), Query Frame = 1 

		  

Query: 6   KGKKGAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLE 65
           K  +GAGGRKGG  +KK V++SV+AGLQFPVGRI R+LKKGRYA R G+GAPVYLAAVLE
Sbjct: 9   KPTRGAGGRKGGD-RKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLE 68

Query: 66  YLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNINPVLL 125
           YLAAEVLELAGNAARDNKK RI PRH+ LA+RND+ELG+LL GVTIA GGVLPNINPVLL
Sbjct: 69  YLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLL 128

Query: 126 PKKVAEKSPKEPKSPSKATKSPKKA 151
           PKK    S +  K  + ATKSPKKA
Sbjct: 129 PKKSTASSSQAEK--ASATKSPKKA 150
[Close]
BLAST of Spo15475.1 vs. TAIR (Arabidopsis)
Match: AT1G51060.1 (histone H2A 10)

HSP 1 Score: 179.5 bits (454), Expect = 1.500e-45
Identity = 93/125 (74.40%), Postives = 103/125 (82.40%), Query Frame = 1 

		  

Query: 10  GAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAA 69
           G G   G G  KK  TRS +AGLQFPVGRI RFLKKG+YA+RVG GAPVYLAAVLEYLAA
Sbjct: 3   GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 70  EVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNINPVLLPKKV 129
           EVLELAGNAARDNKKTRI+PRH+ LAVRND+EL KLL  VTIA+GGV+PNI+ +LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122

Query: 130 AEKSP 135
               P
Sbjct: 123 GASKP 127
[Close]
BLAST of Spo15475.1 vs. TAIR (Arabidopsis)
Match: AT4G27230.1 (histone H2A 2)

HSP 1 Score: 177.6 bits (449), Expect = 5.900e-45
Identity = 92/127 (72.44%), Postives = 104/127 (81.89%), Query Frame = 1 

		  

Query: 10  GAGGRKGGGPKKKPVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAA 69
           G G + G G  KK  +RS +AGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 70  EVLELAGNAARDNKKTRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNINPVLLPKKV 129
           EVLELAGNAARDNKKTRI+PRH+ LAVRND+EL KLL  VTIA+GGV+PNI+ +LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

Query: 130 AEKSPKE 137
               P E
Sbjct: 123 GSSKPTE 129
The following BLAST results are available for this feature:
BLAST of Spo15475.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902232644|gb|KNA22742.1|4.8e-73100.hypothetical protein SOVF_0317... [more]
gi|1012220569|ref|XP_015935637.1|1.1e-6692.0PREDICTED: histone H2A [Arachi... [more]
gi|1021559830|ref|XP_016171199.1|1.1e-6692.0PREDICTED: histone H2A [Arachi... [more]
gi|920701047|gb|KOM44272.1|4.4e-6693.3hypothetical protein LR48_Viga... [more]
gi|950957032|ref|XP_014496972.1|4.4e-6693.3PREDICTED: histone H2A [Vigna ... [more]
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BLAST of Spo15475.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RV94_SPIOL3.4e-73100.Histone H2A OS=Spinacia olerac... [more]
A0A0L9UNW1_PHAAN3.0e-6693.3Histone H2A OS=Phaseolus angul... [more]
A0A0S3SGE5_PHAAN3.0e-6693.3Histone H2A OS=Vigna angularis... [more]
A0A0S3SGH4_PHAAN4.0e-6693.3Histone H2A OS=Vigna angularis... [more]
A0A0L9UND9_PHAAN4.0e-6693.3Histone H2A OS=Phaseolus angul... [more]
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BLAST of Spo15475.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H2A_PETCR2.8e-6589.3Histone H2A OS=Petroselinum cr... [more]
H2A_EUPES3.1e-6487.5Histone H2A OS=Euphorbia esula... [more]
H2A1_PEA2.2e-6285.3Histone H2A.1 OS=Pisum sativum... [more]
H2A2_MEDTR2.9e-6286.2Probable histone H2A.2 OS=Medi... [more]
H2A_MAIZE1.1e-6184.8Histone H2A OS=Zea mays PE=2 S... [more]
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BLAST of Spo15475.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G02560.25.1e-5771.7histone H2A 12[more]
AT5G59870.11.2e-5376.8histone H2A 6[more]
AT5G27670.11.8e-4975.1histone H2A 7[more]
AT1G51060.11.5e-4574.4histone H2A 10[more]
AT4G27230.15.9e-4572.4histone H2A 2[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 22..44
score: 8.9E-52coord: 51..66
score: 8.9E-52coord: 66..79
score: 8.9E-52coord: 108..126
score: 8.9E-52coord: 80..94
score: 8.9
IPR002119Histone H2ASMARTSM00414h2a4coord: 11..131
score: 4.2
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 21..97
score: 3.6
IPR009072Histone-foldGENE3D1.10.20.10coord: 14..129
score: 6.7
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 13..131
score: 1.92
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..150
score: 3.1E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0044248 cellular catabolic process
biological_process GO:0009987 cellular process
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0016070 RNA metabolic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043269 regulation of ion transport
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006606 protein import into nucleus
biological_process GO:0006862 nucleotide transport
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0061025 membrane fusion
biological_process GO:0010351 lithium ion transport
biological_process GO:0006869 lipid transport
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0015696 ammonium transport
biological_process GO:0043090 amino acid import
biological_process GO:0008152 metabolic process
biological_process GO:0051301 cell division
biological_process GO:0006412 translation
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0015802 basic amino acid transport
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005730 nucleolus
cellular_component GO:0009507 chloroplast
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0000786 nucleosome
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005635 nuclear envelope
cellular_component GO:0005634 nucleus
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0008536 Ran GTPase binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003746 translation elongation factor activity
RNA-Seq Expression