Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGATACTAGCTACACCAGTTCTTCTACCCGGTCCTTTACCAACTACACCCAAACACCGCCACCAGTCTCTCTCTTCACCACCACCACCACAGCCACAAACACAACCACTACAGCCACCACTTCTGCGAGCATCGCCGCCATCTGCTCCGCTTAAACCTCTTGTTCAAAAACCCCACCAGCAACCACAAAATTCCAACTTTATCAGAACCCGCAATCCCAACACCTTCAACCCATCTCTTCTACATCTTCCTAGAAGTCGTCGCCGCCTTGGAAAACACCGTGACCCCAACCGCGGCAAACCCTGGACCCACCACAGTCTCTCTCCTCAAGGTCAGCAAATTTTCCAAATTCTTATTGAGACTGGGTTGCATTCATCTAATTTAGACCGTATTTTGATGAAATTGTTTGAAAATCAAGGAACTAGTGAAAATCAGCAGGTGGGTAGTCTTGGTTTAGGGTCTGTAAATGCTGACATTTTGGGTATAATTAAGGGGTTAGGATTCTTGGGGAAGTGTGATTTGGCTTTCAGTGTGTTTAATTGGGTTCGTAGTCGAAACGATTATCAAATTCTATTAGATGGGCCTGTTGTTGCTGCTATGATTAGTATTCTGGGTAAGGAAGGCCGTGTATCGGTTGCGGCTTCCTTGATTAATGAGCTAAATAAGGATGGTTTTGACATTGATGTTTATGCTTATACTGCAATGGTAAGCGCTTATGCTAGTAACGGGCGGTATAGGGAGGCTGTGTCGATTTTTAGGAAAATGGAGGAAGTTGGGTGTAAGCCCACTTTGGTTACTTATAATGTAATTTTGAATGTTTATGGTAAGATGGGTATGCCTTGGATTACAGTTTCTGAAATCATGAACAATATGAAGCTTGATGGGATTTCCCCTGATTTGTACACTTATAATACGCTTATTAGTTGTTGTCGTCGTGGCTCATTGTATGAGGAAGCAGCCGAAGTTTTTGAGGAGATGAAGTTAGCTGGCTTTGTGCCAGATAAGGTCACTTACAATGTCATGTTGGATGTTTATGGGAAGTCTAGGCGTCCTAAAGAAGCGATGGAGGTTTTGCGGGAGATGGAGTTATGTGGGTTTGCACCCAGCGATGTGACTTTCAATTCATTGATTTCAGCTTATGTGAGGGGTGGTTTATTAGAGGAGGCTATGGTGATCAAAGCTCAGATGTTTAAGAAAGGGATCAAACCTGATGTTTTTACTTACACTACTCTCTTTTCTGGTTTTGAGAAAGCTGGTAAAGATGAATGTGCAATGAAGGTTTTTGAGGAGATGAGAAATGCAGGTTGCAAACCTAATATTTGCACCTTTAATGCCCTCATCAAGATGCATGGTAATCGCAAGAGGTTTTCAGAAATGATGCAGATATTCGAAGAAATGAAACATTGCAACTGTACACCTGATATTGTCACTTGGAACTCTCTTTTGGCTGTGTTTGGACAAAATGGAATGGATGTTGAAGTCTCTGGTCTGTTTATTGAGATGAAGAGGGCAGGTTTTGCACCTGAGCGAGATACTTTCAACACCTTAATAAGTGCTTACAGTCGATGTGGCTTGTTTAACCAATCGTTGGCTGTTTATAAAATGATGCTGGAAACTGGTGTTATACCAGATCTTTCAACCTATAATGCCATTTTAGCTGCTTTAGCTCGAGGTGGGCTTTGGGAAGAGTCTGAAAAAGTACTTACTGAAATGAAAAGTGGTCAGTGTAAGCCTAATGAGCTGAGCTACTCTTGTTTGCTACATGGTTATGCTAATGGAAAGCAGATTGAACGTATGTGCACTCTTGCAGAACAGGTGTATGCTGGTGAAATTACACTTCATCCCGTGCTACTCAAGACTTTAGTTCTTGTCAATAGCAAAACCGGCCTTTTAGTGGAAACAGAACGAGCTTTTTGGGAGTTGAGGAGGAAAGGCTACTCTATGGATATAACTACTTTGAATGCCATGGTATCTATATATGGCCGTCGACAGATGGTTAAAAAAGTTGATGAAATTTTGGATTTCATGAAGGAGAGTCAATTTACTCCTAGCTTGACAACATATAACTCTCTCATGTACATGTATAGCCGATCTGGATCATTTCTTAGAGCAGAAGAAGTTCTGAAAGAGATTGCTGGTTATGGACTGCAGCCTGATATCATTTCATATAATACTGTTATATATGCTTATTGCAGAAATGGTCGATTGACGGATGCCTCTAGAATTTTCTCTGAGATGAGTGGCTCTGGAATTTTTCCTGATGCAATTACTTACAACATTTTCATTGCATATTATGCTGCTAATGACATGTTTCCGGAAGCCACCGACATGGTTCGCTGTATGATCAACCATAATTGTAGACCTAACCAAAATACATATAATTCGATCGTTGATTTTTATTGTAAATTCAATCGTCCAGATGAGGCTGCTATTTTTGTAAATAATCTTCGCAAACTTGATTCTTATCTCACAAGGGATGAAGAGTCAAGGTTACTGGAGCGAGTACGGAATAGATATTTCAAGTAAGACTCATCTTTCTTCTGACGTCCTATTTGAGAGGAGAGGCTGAGATGTTTCTAGGGTTTGCCGGTTATTGATCGATTGGAAGAGGTTGGCTTTTCTATTGGACTGCGGCTGTGAACTTTTTAAGAGAATGTGAGCATTAATATACTAAAGTCTTTCTGGAGGATGCTATATCAAACTTCTAGACTTTTCTATACTTTCTATGACCTAAGGATTTCTTTTGGACTGCAGCTCCGCATCCGTGCCTTCTGACTTGGTATATCCATTCATCATCTTCTTATTTATAGGCTTCATGCCACTGTTATTATTTTTGGAAAACATGTATATGGAGTAATCCCTGAATGTTCTTTATTTCTTTTTTTATTTGGGGGGTGGGGGGTGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTGTGGGAGGAGCCACCTTTGGTTGCATGCCAATCTGTGTGACTGTGAGTGCAGTTTTCTTAAGGCACAACTACACACATAATAATGTTCTTGACTTTTGGGGTCTTGCAGTTTTAAATTACTTCATCTTGGGACGTGAATGAAGAATCACTTTGCCCAGTGTGTGGCCACACTAATGTTGTTATTATACCAATGTACATTTATGAAACAACTGAAAGTTTTCCCTCCTTATAACACTGCTTTCAATTATTAAAAGTTATTTATCTCCTTTTCTACTTCCCTATTTGAAGATCTTTTCAGGTAATACAGGATACGTAAGAACCAGAATCTTATCTCATACTATACCCTTAGGGATATCAAACTTAACTGGCTGGGGATTTCGAGAGTTACTTGTTTGGGGAGATCCAAAGAAATTAGGTTAATCTGAAATTTTGTTTTCTGATTGGATTACAGCTTGTCCGCTTTCTTCAGCTGTTAAATAATTGCTCAGATTTGGCAATAGTTTATCTTTATGGCCTTCATTTCCAAGTTCAAAAGGGTTTTGCTCTTTCCCAAATTTTTTGTTTTTGAATTACTGACATTTTCTTTATGCTAACTGCCATGCCTACTTATGGAGGTAGCTACTCGAAGGGAAAAGAGCTGGTAGTCTTTAACACTTCTCTTGATGAAGATGAGGATGCATGTCTTGAATAG ATGGCAGAGATACTAGCTACACCAGTTCTTCTACCCGGTCCTTTACCAACTACACCCAAACACCGCCACCAGTCTCTCTCTTCACCACCACCACCACAGCCACAAACACAACCACTACAGCCACCACTTCTGCGAGCATCGCCGCCATCTGCTCCGCTTAAACCTCTTGTTCAAAAACCCCACCAGCAACCACAAAATTCCAACTTTATCAGAACCCGCAATCCCAACACCTTCAACCCATCTCTTCTACATCTTCCTAGAAGTCGTCGCCGCCTTGGAAAACACCGTGACCCCAACCGCGGCAAACCCTGGACCCACCACAGTCTCTCTCCTCAAGGTCAGCAAATTTTCCAAATTCTTATTGAGACTGGGTTGCATTCATCTAATTTAGACCGTATTTTGATGAAATTGTTTGAAAATCAAGGAACTAGTGAAAATCAGCAGGTGGGTAGTCTTGGTTTAGGGTCTGTAAATGCTGACATTTTGGGTATAATTAAGGGGTTAGGATTCTTGGGGAAGTGTGATTTGGCTTTCAGTGTGTTTAATTGGGTTCGTAGTCGAAACGATTATCAAATTCTATTAGATGGGCCTGTTGTTGCTGCTATGATTAGTATTCTGGGTAAGGAAGGCCGTGTATCGGTTGCGGCTTCCTTGATTAATGAGCTAAATAAGGATGGTTTTGACATTGATGTTTATGCTTATACTGCAATGGTAAGCGCTTATGCTAGTAACGGGCGGTATAGGGAGGCTGTGTCGATTTTTAGGAAAATGGAGGAAGTTGGGTGTAAGCCCACTTTGGTTACTTATAATGTAATTTTGAATGTTTATGGTAAGATGGGTATGCCTTGGATTACAGTTTCTGAAATCATGAACAATATGAAGCTTGATGGGATTTCCCCTGATTTGTACACTTATAATACGCTTATTAGTTGTTGTCGTCGTGGCTCATTGTATGAGGAAGCAGCCGAAGTTTTTGAGGAGATGAAGTTAGCTGGCTTTGTGCCAGATAAGGTCACTTACAATGTCATGTTGGATGTTTATGGGAAGTCTAGGCGTCCTAAAGAAGCGATGGAGGTTTTGCGGGAGATGGAGTTATGTGGGTTTGCACCCAGCGATGTGACTTTCAATTCATTGATTTCAGCTTATGTGAGGGGTGGTTTATTAGAGGAGGCTATGGTGATCAAAGCTCAGATGTTTAAGAAAGGGATCAAACCTGATGTTTTTACTTACACTACTCTCTTTTCTGGTTTTGAGAAAGCTGGTAAAGATGAATGTGCAATGAAGGTTTTTGAGGAGATGAGAAATGCAGGTTGCAAACCTAATATTTGCACCTTTAATGCCCTCATCAAGATGCATGGTAATCGCAAGAGGTTTTCAGAAATGATGCAGATATTCGAAGAAATGAAACATTGCAACTGTACACCTGATATTGTCACTTGGAACTCTCTTTTGGCTGTGTTTGGACAAAATGGAATGGATGTTGAAGTCTCTGGTCTGTTTATTGAGATGAAGAGGGCAGGTTTTGCACCTGAGCGAGATACTTTCAACACCTTAATAAGTGCTTACAGTCGATGTGGCTTGTTTAACCAATCGTTGGCTGTTTATAAAATGATGCTGGAAACTGGTGTTATACCAGATCTTTCAACCTATAATGCCATTTTAGCTGCTTTAGCTCGAGGTGGGCTTTGGGAAGAGTCTGAAAAAGTACTTACTGAAATGAAAAGTGGTCAGTGTAAGCCTAATGAGCTGAGCTACTCTTGTTTGCTACATGGTTATGCTAATGGAAAGCAGATTGAACGTATGTGCACTCTTGCAGAACAGGTGTATGCTGGTGAAATTACACTTCATCCCGTGCTACTCAAGACTTTAGTTCTTGTCAATAGCAAAACCGGCCTTTTAGTGGAAACAGAACGAGCTTTTTGGGAGTTGAGGAGGAAAGGCTACTCTATGGATATAACTACTTTGAATGCCATGGTATCTATATATGGCCGTCGACAGATGGTTAAAAAAGTTGATGAAATTTTGGATTTCATGAAGGAGAGTCAATTTACTCCTAGCTTGACAACATATAACTCTCTCATGTACATGTATAGCCGATCTGGATCATTTCTTAGAGCAGAAGAAGTTCTGAAAGAGATTGCTGGTTATGGACTGCAGCCTGATATCATTTCATATAATACTGTTATATATGCTTATTGCAGAAATGGTCGATTGACGGATGCCTCTAGAATTTTCTCTGAGATGAGTGGCTCTGGAATTTTTCCTGATGCAATTACTTACAACATTTTCATTGCATATTATGCTGCTAATGACATGTTTCCGGAAGCCACCGACATGGTTCGCTCTCCGCATCCGTGCCTTCTGACTTGCTACTCGAAGGGAAAAGAGCTGGTAGTCTTTAACACTTCTCTTGATGAAGATGAGGATGCATGTCTTGAATAG ATGGCAGAGATACTAGCTACACCAGTTCTTCTACCCGGTCCTTTACCAACTACACCCAAACACCGCCACCAGTCTCTCTCTTCACCACCACCACCACAGCCACAAACACAACCACTACAGCCACCACTTCTGCGAGCATCGCCGCCATCTGCTCCGCTTAAACCTCTTGTTCAAAAACCCCACCAGCAACCACAAAATTCCAACTTTATCAGAACCCGCAATCCCAACACCTTCAACCCATCTCTTCTACATCTTCCTAGAAGTCGTCGCCGCCTTGGAAAACACCGTGACCCCAACCGCGGCAAACCCTGGACCCACCACAGTCTCTCTCCTCAAGGTCAGCAAATTTTCCAAATTCTTATTGAGACTGGGTTGCATTCATCTAATTTAGACCGTATTTTGATGAAATTGTTTGAAAATCAAGGAACTAGTGAAAATCAGCAGGTGGGTAGTCTTGGTTTAGGGTCTGTAAATGCTGACATTTTGGGTATAATTAAGGGGTTAGGATTCTTGGGGAAGTGTGATTTGGCTTTCAGTGTGTTTAATTGGGTTCGTAGTCGAAACGATTATCAAATTCTATTAGATGGGCCTGTTGTTGCTGCTATGATTAGTATTCTGGGTAAGGAAGGCCGTGTATCGGTTGCGGCTTCCTTGATTAATGAGCTAAATAAGGATGGTTTTGACATTGATGTTTATGCTTATACTGCAATGGTAAGCGCTTATGCTAGTAACGGGCGGTATAGGGAGGCTGTGTCGATTTTTAGGAAAATGGAGGAAGTTGGGTGTAAGCCCACTTTGGTTACTTATAATGTAATTTTGAATGTTTATGGTAAGATGGGTATGCCTTGGATTACAGTTTCTGAAATCATGAACAATATGAAGCTTGATGGGATTTCCCCTGATTTGTACACTTATAATACGCTTATTAGTTGTTGTCGTCGTGGCTCATTGTATGAGGAAGCAGCCGAAGTTTTTGAGGAGATGAAGTTAGCTGGCTTTGTGCCAGATAAGGTCACTTACAATGTCATGTTGGATGTTTATGGGAAGTCTAGGCGTCCTAAAGAAGCGATGGAGGTTTTGCGGGAGATGGAGTTATGTGGGTTTGCACCCAGCGATGTGACTTTCAATTCATTGATTTCAGCTTATGTGAGGGGTGGTTTATTAGAGGAGGCTATGGTGATCAAAGCTCAGATGTTTAAGAAAGGGATCAAACCTGATGTTTTTACTTACACTACTCTCTTTTCTGGTTTTGAGAAAGCTGGTAAAGATGAATGTGCAATGAAGGTTTTTGAGGAGATGAGAAATGCAGGTTGCAAACCTAATATTTGCACCTTTAATGCCCTCATCAAGATGCATGGTAATCGCAAGAGGTTTTCAGAAATGATGCAGATATTCGAAGAAATGAAACATTGCAACTGTACACCTGATATTGTCACTTGGAACTCTCTTTTGGCTGTGTTTGGACAAAATGGAATGGATGTTGAAGTCTCTGGTCTGTTTATTGAGATGAAGAGGGCAGGTTTTGCACCTGAGCGAGATACTTTCAACACCTTAATAAGTGCTTACAGTCGATGTGGCTTGTTTAACCAATCGTTGGCTGTTTATAAAATGATGCTGGAAACTGGTGTTATACCAGATCTTTCAACCTATAATGCCATTTTAGCTGCTTTAGCTCGAGGTGGGCTTTGGGAAGAGTCTGAAAAAGTACTTACTGAAATGAAAAGTGGTCAGTGTAAGCCTAATGAGCTGAGCTACTCTTGTTTGCTACATGGTTATGCTAATGGAAAGCAGATTGAACGTATGTGCACTCTTGCAGAACAGGTGTATGCTGGTGAAATTACACTTCATCCCGTGCTACTCAAGACTTTAGTTCTTGTCAATAGCAAAACCGGCCTTTTAGTGGAAACAGAACGAGCTTTTTGGGAGTTGAGGAGGAAAGGCTACTCTATGGATATAACTACTTTGAATGCCATGGTATCTATATATGGCCGTCGACAGATGGTTAAAAAAGTTGATGAAATTTTGGATTTCATGAAGGAGAGTCAATTTACTCCTAGCTTGACAACATATAACTCTCTCATGTACATGTATAGCCGATCTGGATCATTTCTTAGAGCAGAAGAAGTTCTGAAAGAGATTGCTGGTTATGGACTGCAGCCTGATATCATTTCATATAATACTGTTATATATGCTTATTGCAGAAATGGTCGATTGACGGATGCCTCTAGAATTTTCTCTGAGATGAGTGGCTCTGGAATTTTTCCTGATGCAATTACTTACAACATTTTCATTGCATATTATGCTGCTAATGACATGTTTCCGGAAGCCACCGACATGGTTCGCTCTCCGCATCCGTGCCTTCTGACTTGCTACTCGAAGGGAAAAGAGCTGGTAGTCTTTAACACTTCTCTTGATGAAGATGAGGATGCATGTCTTGAATAG MAEILATPVLLPGPLPTTPKHRHQSLSSPPPPQPQTQPLQPPLLRASPPSAPLKPLVQKPHQQPQNSNFIRTRNPNTFNPSLLHLPRSRRRLGKHRDPNRGKPWTHHSLSPQGQQIFQILIETGLHSSNLDRILMKLFENQGTSENQQVGSLGLGSVNADILGIIKGLGFLGKCDLAFSVFNWVRSRNDYQILLDGPVVAAMISILGKEGRVSVAASLINELNKDGFDIDVYAYTAMVSAYASNGRYREAVSIFRKMEEVGCKPTLVTYNVILNVYGKMGMPWITVSEIMNNMKLDGISPDLYTYNTLISCCRRGSLYEEAAEVFEEMKLAGFVPDKVTYNVMLDVYGKSRRPKEAMEVLREMELCGFAPSDVTFNSLISAYVRGGLLEEAMVIKAQMFKKGIKPDVFTYTTLFSGFEKAGKDECAMKVFEEMRNAGCKPNICTFNALIKMHGNRKRFSEMMQIFEEMKHCNCTPDIVTWNSLLAVFGQNGMDVEVSGLFIEMKRAGFAPERDTFNTLISAYSRCGLFNQSLAVYKMMLETGVIPDLSTYNAILAALARGGLWEESEKVLTEMKSGQCKPNELSYSCLLHGYANGKQIERMCTLAEQVYAGEITLHPVLLKTLVLVNSKTGLLVETERAFWELRRKGYSMDITTLNAMVSIYGRRQMVKKVDEILDFMKESQFTPSLTTYNSLMYMYSRSGSFLRAEEVLKEIAGYGLQPDIISYNTVIYAYCRNGRLTDASRIFSEMSGSGIFPDAITYNIFIAYYAANDMFPEATDMVRSPHPCLLTCYSKGKELVVFNTSLDEDEDACLE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15481.1 vs. NCBI nr
Match: gi|902181829|gb|KNA09810.1| (hypothetical protein SOVF_150220 [Spinacia oleracea]) HSP 1 Score: 1560.8 bits (4040), Expect = 0.000e+0 Identity = 781/781 (100.00%), Postives = 781/781 (100.00%), Query Frame = 1
BLAST of Spo15481.1 vs. NCBI nr
Match: gi|731352367|ref|XP_010687511.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 1238.4 bits (3203), Expect = 0.000e+0 Identity = 627/782 (80.18%), Postives = 680/782 (86.96%), Query Frame = 1
BLAST of Spo15481.1 vs. NCBI nr
Match: gi|1009125603|ref|XP_015879698.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Ziziphus jujuba]) HSP 1 Score: 1035.4 bits (2676), Expect = 5.300e-299 Identity = 534/788 (67.77%), Postives = 626/788 (79.44%), Query Frame = 1
BLAST of Spo15481.1 vs. NCBI nr
Match: gi|225429339|ref|XP_002269471.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Vitis vinifera]) HSP 1 Score: 1005.7 bits (2599), Expect = 4.500e-290 Identity = 512/778 (65.81%), Postives = 608/778 (78.15%), Query Frame = 1
BLAST of Spo15481.1 vs. NCBI nr
Match: gi|449438627|ref|XP_004137089.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Cucumis sativus]) HSP 1 Score: 1001.5 bits (2588), Expect = 8.400e-289 Identity = 515/787 (65.44%), Postives = 618/787 (78.53%), Query Frame = 1
BLAST of Spo15481.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRF5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_150220 PE=4 SV=1) HSP 1 Score: 1560.8 bits (4040), Expect = 0.000e+0 Identity = 781/781 (100.00%), Postives = 781/781 (100.00%), Query Frame = 1
BLAST of Spo15481.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUH8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g190510 PE=4 SV=1) HSP 1 Score: 1238.4 bits (3203), Expect = 0.000e+0 Identity = 627/782 (80.18%), Postives = 680/782 (86.96%), Query Frame = 1
BLAST of Spo15481.1 vs. UniProtKB/TrEMBL
Match: F6H676_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00440 PE=4 SV=1) HSP 1 Score: 1005.7 bits (2599), Expect = 3.100e-290 Identity = 512/778 (65.81%), Postives = 608/778 (78.15%), Query Frame = 1
BLAST of Spo15481.1 vs. UniProtKB/TrEMBL
Match: A0A0A0K4H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071530 PE=4 SV=1) HSP 1 Score: 1001.5 bits (2588), Expect = 5.900e-289 Identity = 515/787 (65.44%), Postives = 618/787 (78.53%), Query Frame = 1
BLAST of Spo15481.1 vs. UniProtKB/TrEMBL
Match: A0A061E043_THECC (Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_007183 PE=4 SV=1) HSP 1 Score: 998.0 bits (2579), Expect = 6.500e-288 Identity = 510/789 (64.64%), Postives = 612/789 (77.57%), Query Frame = 1
BLAST of Spo15481.1 vs. ExPASy Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1) HSP 1 Score: 934.5 bits (2414), Expect = 7.900e-271 Identity = 479/783 (61.17%), Postives = 586/783 (74.84%), Query Frame = 1
BLAST of Spo15481.1 vs. ExPASy Swiss-Prot
Match: PP163_ARATH (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1) HSP 1 Score: 505.0 bits (1299), Expect = 1.500e-141 Identity = 294/775 (37.94%), Postives = 435/775 (56.13%), Query Frame = 1
BLAST of Spo15481.1 vs. ExPASy Swiss-Prot
Match: PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.100e-73 Identity = 172/655 (26.26%), Postives = 317/655 (48.40%), Query Frame = 1
BLAST of Spo15481.1 vs. ExPASy Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 9.300e-62 Identity = 162/556 (29.14%), Postives = 281/556 (50.54%), Query Frame = 1
BLAST of Spo15481.1 vs. ExPASy Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2) HSP 1 Score: 230.3 bits (586), Expect = 7.400e-59 Identity = 142/541 (26.25%), Postives = 274/541 (50.65%), Query Frame = 1
BLAST of Spo15481.1 vs. TAIR (Arabidopsis)
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 934.5 bits (2414), Expect = 4.500e-272 Identity = 479/783 (61.17%), Postives = 586/783 (74.84%), Query Frame = 1
BLAST of Spo15481.1 vs. TAIR (Arabidopsis)
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 505.0 bits (1299), Expect = 8.700e-143 Identity = 294/775 (37.94%), Postives = 435/775 (56.13%), Query Frame = 1
BLAST of Spo15481.1 vs. TAIR (Arabidopsis)
Match: AT1G74850.1 (plastid transcriptionally active 2) HSP 1 Score: 278.1 bits (710), Expect = 1.700e-74 Identity = 172/655 (26.26%), Postives = 317/655 (48.40%), Query Frame = 1
BLAST of Spo15481.1 vs. TAIR (Arabidopsis)
Match: AT2G31400.1 (genomes uncoupled 1) HSP 1 Score: 240.0 bits (611), Expect = 5.200e-63 Identity = 162/556 (29.14%), Postives = 281/556 (50.54%), Query Frame = 1
BLAST of Spo15481.1 vs. TAIR (Arabidopsis)
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 230.3 bits (586), Expect = 4.100e-60 Identity = 142/541 (26.25%), Postives = 274/541 (50.65%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15481.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo15481.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo15481.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo15481.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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