Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCGTTTGCTTCTTGGATCAACAGCTTCCTTGCTTGCATGGGGTATGCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATTTATTTCTGATTTCAAAATTGTAACCTTTTCAATTTATAATTATTTTGTCAATTAATTAGTAATTTATGTTCTGTAATACATACTGTTATTCCCTTATTGGATAAAAATTAAGATATGGGTCCTTCTGAACTGATTCTTTTATGTTCTTTGGTCACTAGTGATATTTTGAGCTGATATTTATTTTTCCTTTCCAAGATTTTTTTGGTTGGTTGGTTTACTGCTGGGATTAAAACTGTTTTAGTGTAGGAAGAGGCACAAAGGACAAGGCGACAAATGTTGTAGATGGGATTCGATCACAGGTCTTGGTTACCATCCCTCAATACTTTAATAACTAAGCCAGTTGATATTCACTGGGATTGGGACTGTAAATATGGCATTAGTTGTAAATTAGCTAAATTTGGATTTGAATGGTTAATATGCTGGTAATGATGTAGTTTATTGACTAAGTAAACTCTGGTGACTGTTTTTGAGCTACAATGTTGTTATGAAAGGAGCAGATATCTGATAAGCAGTCTGCCTATTGCTAACTTTCACTTGCAATTTAAACTAAAACAAGTGTGATTTAGTACTGAAAGTGTCACTGCGTCACTTATCATTCCGTAAATTGCTGATTGAAAAGCCGAGAACCATTTATGCACCACCTGAGCAGATGTGGAATTGGTTTATCCCATATGAATAAGCACAAGAAAGATCACTACTGATGACGATGGAGGTTTTCCATGTGTAATTTATAAGTCATGGTTGTTTAGGGGATCAACAGTTAAAATCGTGTTTAATCAAGTTTAACTCCTAAGGTTAGTAGATGTGGATTGGTTCATCCCATATGATTGAGCACAAGAAAGATTACTAATGGCGATGAGGAAGGTTGTGGATGTATAATTTATAGGTCATGGTTGTTTAGGGGATCAACAGTTAAAATCGTGTTTAATCAAGTTCAGCTCCTAAGGTTTTCCTTATAACTTTGTGGTTGTTTCCTTTCATGTGTCCGAGGAAAAACCTCCATGCTTGACCTCATTCTTATTGTCGTATTGACATCAAATGTGCTCACTTGTAGCTATATGTCTATATCGGTTATTAAAGACACCACCATACCTGCTAGGTGAACATTTCTTGCCCTTCACCGAGTCAGCAATCTAGGGAACTTTGCTGTTATATTGACTTCAGAAGTACTCATCACAGTTACATATGGTACTAATTCGGTTGTAGCTAGTAAATGTTGTTCAGTATTCTGCACATTTGTGATAATGTTTTTGGTTATTCAGATGATTTGTCAATTTTCTATGAGCTAAGTTGATACCTTTTAATCTTTTTGAGCTCCTTTTTTTTCCTAGTTTTACACCTCAATTTTGAGTGTTTTTGATGAATGCTGATGGGTGATGACTTCATTTTTTAATTTGTGCAATGTTTGATTTGCGTATTACCTAACGAAATATCACACCCATAGGGTTAGAATTCACTTTTTTAACAGGGTTGCTATCTTGATTTTGGTGTAAGCTATCGTATCTCTTTCTCTGCTTCCTGTATGTTCAGTTGTTTCAGATTCACCGGGGGATAAAATTATTAGTAAAATCTGAAAACTTGTATGAGAGGCTAGTGTTATTCTAATCTCAGAATGACTCCACTCTTATGCAACTTGTTAAGAATTACTTGTGTTTTATTTGATGGGCGATTAAGTATAGGTTATTAAGTCCCCTGGGAGTTTTCTTACATTGTGATGTTTCGGTAGAGTTGTGATATGGTGGGTTCTTTTTCTAGGAAATCACGAGTTTTTGTATACATGCCAGAGATCCAGATTCGTACCCATTTCCTCTTTTATACAATAGCCCCCAACCCAGGGGGTGATATGAATCAAACCCCAACATCTTTGGTGATGTTGATTGGTTTTTCTTGTATTTTGGTGTAATATCTGGATTTCTCAAATGCTGCTAGTATGTGGCTTGTACATATTCATGAATTTGTTTTGGGACAGAGCAGTAGCTGTTTGGGAGGCTGTGCAAAATCAACGCGCGCTCCCCCTGTAGATGATTATCCACCAAAGGGACAACGATGTCAGGGAATGGTGGTAGAGAAACACAGTTTATCAGATGACTTTTGGGGTACCAGCACGGGCGATTTGGAGAACCCGGTCGGTCTATCACAAAGAAGCATTTCTTCACTCAGTACATCCAATGTCAGTTTTCTTTCTGATCTTGGATCATCGAGCATCAACTCCCATAATGACTTCGTTAATCCTGGCAAGTTTTTTCGTTGCACCTTTCTCTACTGGAGTTTCCTTCTTCCACTATTTGCAGTCTTTTTTTAACTTATCTACATTCACCTTTGGGAGTGCTGTAATGTCATTGAACAATCATTTCAAGGGAACACTTTTCATTGACTATGTTTTTCATGATTATCTTAGAATGTCAACTGATTTTTGATGATTTCATGTCGATAGGTCTTCTTCTCTGGACTCAAAACCGTCTTCAATGGATTGGAGCTACAAAATCAAATGAAGATCATCAAGCCATAGGCCCCACAATCAGGTTACATTTCTCTAGAGCCCTTGATACGAGTCGAGTCACTTACATCACTCATGTGCTAGATTATGTGCCTCCCCCTCGCCATCTCCCCACAGATCTCACCTCCGTTAATATCATTTCATATACCAAGACTGCAAGCAAATTGTCAAAATCTATCCTTGTTCCCAACTAAAGGCTTTGGGTAAAAAAATTGTGAAATAACAACAAGCATTGTGTCTGGTGCATATTGGTGTTCTAGGGACCTTGTCAAACATTTTGCAATTGGTGCGCTATGTTAATGGACTCTTCATTTTACCTCAAGTATCCGTGTCGGATCCTCAGACACTCGGACATGGAGTATGGACACCGGACACTTAATTTTTGACCAAAATCATGATTTTTTTTAACAAAAAATAGCCGAGTCGAACACTTGAACACGTACCTGTATCCGGCGTGGGTACCCGAGTCCAGGTAATATAGCTGGTGGGTTCTTGACAAGGTTCCTAGAACACATGCACTTTTTATAAATGGCCAAGTCTTAAACAATCTCAATTTGCAAAGAAAACTAAAACGTACGCATGTTTTATAAATGGCCAAGTCTTACAGAATTTCACATAAGCTCGAATCTTTTAGTTGCCAAGTTTGAGTAACATATGTCATAGTTAGGCTTCGTTTATTTTCGTATAGAAAATCCTTAGTTGAACGTATCTGAAAGACTTTATAAAGAGCGAAGCATACTCTATTATGTAACTCGTTAAGGGGCGGGTTCTGACTTCTGAGTTTCTATGAGAACATAACGTATCATGCCAAAAAGATGCTCACCATATCAGAACTCTTTCCGGAAGACTTCTCCTGATTGTTATAAGTGCAACATTAATAAGACAATTAACTTTATGGAATATATTTTCTTACCATCATAGAAATGCGTGTTTTACAGTCTAAATGCTACGTATGACAGCTTGCTTAGCTCCAGGGAGCGATTCAGGCGGCCCATCCCTTTATCGGTAAGTTCTCTTATGAATAGATTGGAGTTTTCTGTGTTATGAATTCGCTACGAGTTCTAACTGCTTATACACGAGTTCTTACTGAGTATTCTGGTGGCATCAGGAAATGGTAGACTTTCTAGTTGATGTATGGGAGCAGGAAGGATTGTATGACTGAAAGACACCAATTGTAGATAAGATTCAGTTTCTCAATACTTGAAACCTCGGAATTCTTAGGAGAATTTGTGAGCCAAAAAAGCCATATAACCACCCATGTATAGCAATAGATGTTGATTAACACTGCTAATTTTATAAACTCATGTATGTTTTTTGTTTTTCCTAGTTCACATCTTTTGTTTCGACTTCTGTTGTTGCTAAAATGTGTCTATGGTATGGACCGGTATCTCGTGTCTGTTATTCAATACAAAGATAGATCAGTTATGCACGTTGTGAACCTGTGATGTTACTAAAAACACCCATCTACATGATATTATTTTTCTTTAACAACACTCAGAATCCTGTTAAATACTCTTTCAGTATTTCTCCTATTGCTAATATGAAAAATTCAGATTCCATGCAGCATGTATTCTGA ATGATTCGTTTGCTTCTTGGATCAACAGCTTCCTTGCTTGCATGGGGAAGAGGCACAAAGGACAAGGCGACAAATGTTGTAGATGGGATTCGATCACAGAGCAGTAGCTGTTTGGGAGGCTGTGCAAAATCAACGCGCGCTCCCCCTGTAGATGATTATCCACCAAAGGGACAACGATGTCAGGGAATGGTGGTAGAGAAACACAGTTTATCAGATGACTTTTGGGGTACCAGCACGGGCGATTTGGAGAACCCGGTCGGTCTATCACAAAGAAGCATTTCTTCACTCAGTACATCCAATGTCAGTTTTCTTTCTGATCTTGGATCATCGAGCATCAACTCCCATAATGACTTCGTTAATCCTGGCAATCTAAATGCTACGTATGACAGCTTGCTTAGCTCCAGGGAGCGATTCAGGCGGCCCATCCCTTTATCGAATCCTGTTAAATACTCTTTCAGTATTTCTCCTATTGCTAATATGAAAAATTCAGATTCCATGCAGCATGTATTCTGA ATGATTCGTTTGCTTCTTGGATCAACAGCTTCCTTGCTTGCATGGGGAAGAGGCACAAAGGACAAGGCGACAAATGTTGTAGATGGGATTCGATCACAGAGCAGTAGCTGTTTGGGAGGCTGTGCAAAATCAACGCGCGCTCCCCCTGTAGATGATTATCCACCAAAGGGACAACGATGTCAGGGAATGGTGGTAGAGAAACACAGTTTATCAGATGACTTTTGGGGTACCAGCACGGGCGATTTGGAGAACCCGGTCGGTCTATCACAAAGAAGCATTTCTTCACTCAGTACATCCAATGTCAGTTTTCTTTCTGATCTTGGATCATCGAGCATCAACTCCCATAATGACTTCGTTAATCCTGGCAATCTAAATGCTACGTATGACAGCTTGCTTAGCTCCAGGGAGCGATTCAGGCGGCCCATCCCTTTATCGAATCCTGTTAAATACTCTTTCAGTATTTCTCCTATTGCTAATATGAAAAATTCAGATTCCATGCAGCATGTATTCTGA MIRLLLGSTASLLAWGRGTKDKATNVVDGIRSQSSSCLGGCAKSTRAPPVDDYPPKGQRCQGMVVEKHSLSDDFWGTSTGDLENPVGLSQRSISSLSTSNVSFLSDLGSSSINSHNDFVNPGNLNATYDSLLSSRERFRRPIPLSNPVKYSFSISPIANMKNSDSMQHVF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15547.1 vs. NCBI nr
Match: gi|902175438|gb|KNA08594.1| (hypothetical protein SOVF_161220 isoform A [Spinacia oleracea]) HSP 1 Score: 203.4 bits (516), Expect = 3.200e-49 Identity = 109/142 (76.76%), Postives = 112/142 (78.87%), Query Frame = 1
BLAST of Spo15547.1 vs. NCBI nr
Match: gi|902175439|gb|KNA08595.1| (hypothetical protein SOVF_161220 isoform B [Spinacia oleracea]) HSP 1 Score: 189.9 bits (481), Expect = 3.700e-45 Identity = 105/149 (70.47%), Postives = 110/149 (73.83%), Query Frame = 1
BLAST of Spo15547.1 vs. NCBI nr
Match: gi|731353275|ref|XP_010687978.1| (PREDICTED: uncharacterized protein LOC104902025 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 172.6 bits (436), Expect = 6.100e-40 Identity = 92/148 (62.16%), Postives = 106/148 (71.62%), Query Frame = 1
BLAST of Spo15547.1 vs. NCBI nr
Match: gi|731353281|ref|XP_010687981.1| (PREDICTED: uncharacterized protein LOC104902025 isoform X4 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 169.9 bits (429), Expect = 3.900e-39 Identity = 91/158 (57.59%), Postives = 107/158 (67.72%), Query Frame = 1
BLAST of Spo15547.1 vs. NCBI nr
Match: gi|731353279|ref|XP_010687980.1| (PREDICTED: uncharacterized protein LOC104902025 isoform X3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 169.1 bits (427), Expect = 6.700e-39 Identity = 90/143 (62.94%), Postives = 102/143 (71.33%), Query Frame = 1
BLAST of Spo15547.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMX6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161220 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.200e-49 Identity = 109/142 (76.76%), Postives = 112/142 (78.87%), Query Frame = 1
BLAST of Spo15547.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMV5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161220 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.600e-45 Identity = 105/149 (70.47%), Postives = 110/149 (73.83%), Query Frame = 1
BLAST of Spo15547.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EIM6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194350 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 2.700e-39 Identity = 91/158 (57.59%), Postives = 107/158 (67.72%), Query Frame = 1
BLAST of Spo15547.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BNJ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194350 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 2.800e-36 Identity = 87/151 (57.62%), Postives = 103/151 (68.21%), Query Frame = 1
BLAST of Spo15547.1 vs. UniProtKB/TrEMBL
Match: A0A067K850_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13341 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.600e-17 Identity = 65/160 (40.62%), Postives = 86/160 (53.75%), Query Frame = 1
BLAST of Spo15547.1 vs. TAIR (Arabidopsis)
Match: AT5G25360.1 (unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 5.500e-15 Identity = 54/149 (36.24%), Postives = 75/149 (50.34%), Query Frame = 1
BLAST of Spo15547.1 vs. TAIR (Arabidopsis)
Match: AT4G32342.1 (unknown protein) HSP 1 Score: 60.1 bits (144), Expect = 1.600e-9 Identity = 49/145 (33.79%), Postives = 68/145 (46.90%), Query Frame = 1
BLAST of Spo15547.1 vs. TAIR (Arabidopsis)
Match: AT3G15770.1 (unknown protein) HSP 1 Score: 51.2 bits (121), Expect = 7.200e-7 Identity = 49/153 (32.03%), Postives = 68/153 (44.44%), Query Frame = 1
BLAST of Spo15547.1 vs. TAIR (Arabidopsis)
Match: AT1G15350.2 (unknown protein) HSP 1 Score: 50.8 bits (120), Expect = 9.400e-7 Identity = 49/153 (32.03%), Postives = 68/153 (44.44%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15547.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo15547.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo15547.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Spo15547.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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