Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGTCTTCTCTCTCCTTTAAATACACAGTAGAGAGAGAGAAAGAAAACAGAGAGAGAAAGAAGAGTATTTCAGAAGCTCTCTCTCTTCACTCACTAACTATGCTTCGCTGATTTTGATGCATTTCACTGTAACAAAGAAGAAGAACTAGAGAGAGAAAACTAGAGAGAGAAGGAGTGGAGTACAAGTCTTTTTTTGTTCATCCTTTGTTTTTTCCCCTTTTCTTCACCCAACTCCCCCATTTTGTTAGTTTTGTTCTTAATTTCCTGGGGGTCTTCTTCTAATTTTTTGGGGTTTTTTATAAAATCCAAAAAAAAAAAATCAAAAAATCAAATCAAAAGGTATGTACTCTTTCTCTCTCCTATGATTTTTTTCCACTTTACTTTAGCTGATGATTAGAGCTAAAATGTTAAGATTAAGAGCTTTTAATCATCATTTTTCTTTAATTTCTGTGTTTTTTGAAAAACCCATCTGGTTTTTTTTTGTGATTTCCGGTTTAATCTGCAATTTGATTGGTGGTTGAGCTGATGGATGCATTTTTTGGGTGATTTTCATGTACTTTTCTTGAATTTATGGGATTATTGTGATGGGTTTATTTCAAAAATTATTTAAAGTAATAGTCACCTTGGGAAATGTTATAATCTGGGCAACACATTCAATGATCTGGTGTTTTCTTCAAACTGGGATTTTTTGCGAATTTAATCTGCATTTGCTTGAAATTTTCTGGGTTTTGTTTACTCCTACTTTCAGTTCCTAGATTTGCATGTTCTTATTTCCCTCCTTTTTTTGTTGTTTGATTGTGAAATATAAATTTTCTGGGTTTATTGATCTAAACTATGATTTTTAACCCAATTTTGATTAGATTTTTTCTGTGCAATATAATACAGATTGTGGGAATTTTTATGATGATGTTGAAGAAAAGAAGTAGATCAATTGCGCAAGAACAACAAAACATGGGTCCAATAACATCAGATGATGGTTCTGAATCAGGTTTACAATGTGATTTTTTAGGGCAAAGGCAAAAGACCAACTCTTTTTTTAATGTTCCTGGTCTGTTTGTAGGATTAACCCCAAAAGTTGCCTCAGATTGTGACTCAGTTAGAAGCCCAACTTCACCTCTTGACTTTAAGTTGTTCTGTAATTTGGGCACTTCCTTTAGGTTCCCTAAATCCTCTTTAGAGGTGCACCAAAAGTGTTGGGATTGTCCCAAGGTTGGACTTGGGAGTATTGTTGATTCTCTTGATGATGATGACAGGAACTTACCTGAGAAAGATAAAGTTATCCCTTCATCTAATAGTAATAGTAAGACTATACTGTTTGGGTCTCAGATTAGGAGTAAAGGCACCCCGAATTCGCCCACCTGTGCCGAGTTTTGTGAGGCGCCTAAGTCGTTGCCTAAAAACTATGCAGTTTTCCCCCATGCTAGGTTGACAAGGCCTTCTAATCTTCAAAAGGGTAGCTCTGATGTTTTATTTGAGATTGGAGGAGACCCTTTAGAGTCTGACCAATTTGGGAAAATCCAGTCTTTTTCTTTGGATTCCAAGAGGATAGGGTCGAGGTTGAGCAATCGCAATGTAGAGTCAAGGATCAGGCATTCTTGTTTTGAGAACGAGACAATTGAGAAGAGCTTGAGTTTTGATTTGATCGGAGGAGGTCTGAATAAGCCGACTACAGGTACAATGTCGGGGAATGAAATAACTCGATCTCTCACACCTGAAGAGATTGAGCTCTCAGAGGACTATACATGTGTAATTTCACATGGTCCCAACCCCAGAACTACTCATATTTTTGGTGACTGTGTTTTGAAAAGTCACCCTAATGGAATTGATCCTGGAAATAAGGGAGAGACTAGATTGCCTTGTATGGAAAACTGTGTATCATCACCATATCCTTCAAATGATTTCTTGAGTTGCTGCTACTTTTGCAAGCAGAAGCTGGTAGAGGGCAAAGACATATACATGTATAGGTTCGTTCGTTTGTTCGAGGGTCTTACTTACTTTCATCTAACCTTCTTCTACATTGCTGCATTGTGGTTTAACTGTTTATGTTTATTTTAACCTTGTTGCAGAGGTGAGAAAGCTTTCTGCAGTTGGGATTGCCGTTTGGAGGAGATTTCCATTGAGGAGAAGCAGGAGACTAACATGACCGAGGCTCCCACAGAATCTCCCAAATCCGAAAACGGTGACGACATTTTTGAGAAAAGCATGTTCGTTGCTATATAGAGAAAATTTATCAATTGCTTTCCCTTAAGTCATTATGCCCGTGATTGATGAAATTGCCTGAGTTTGATCATCTGATAATAAAGAGCTGTGTCTTTTGTGTATCTATTAGCAGCCTCAGCTCAGGTGGTCATTTCATGGCATGTTTAGTAGGACCTCTTATTTCAATTCATCTCTTATGGTTCTAACGACTCTTGGAAAGCTAATCGGCTAGATTCTTATGATTTTGACCTTAGTTATAAAAGCTGAGAATGGCTTGTTTTACCATTTCTGCTAATATCTTCCTTCATCTGGAACTGTGAAAAACCATTAAAAAAAAGAACTCTTTTTTTTGTTCCTTCTTTTTTGGTTTACCATTTTGAAAGGAGTTGATGTATAAGCCTCCCATCTGAACAAATTATTGACATTAATATATAAAATAGTATTTTTTTTTTTTTTTGGATATAAAACCTTGAATATTTTGTTGAAATATGATTCTTAT TCGTCTTCTCTCTCCTTTAAATACACAGTAGAGAGAGAGAAAGAAAACAGAGAGAGAAAGAAGAGTATTTCAGAAGCTCTCTCTCTTCACTCACTAACTATGCTTCGCTGATTTTGATGCATTTCACTGTAACAAAGAAGAAGAACTAGAGAGAGAAAACTAGAGAGAGAAGGAGTGGAGTACAAGTCTTTTTTTGTTCATCCTTTGTTTTTTCCCCTTTTCTTCACCCAACTCCCCCATTTTGTTAGTTTTGTTCTTAATTTCCTGGGGGTCTTCTTCTAATTTTTTGGGGTTTTTTATAAAATCCAAAAAAAAAAAATCAAAAAATCAAATCAAAAGATTGTGGGAATTTTTATGATGATGTTGAAGAAAAGAAGTAGATCAATTGCGCAAGAACAACAAAACATGGGTCCAATAACATCAGATGATGGTTCTGAATCAGGTTTACAATGTGATTTTTTAGGGCAAAGGCAAAAGACCAACTCTTTTTTTAATGTTCCTGGTCTGTTTGTAGGATTAACCCCAAAAGTTGCCTCAGATTGTGACTCAGTTAGAAGCCCAACTTCACCTCTTGACTTTAAGTTGTTCTGTAATTTGGGCACTTCCTTTAGGTTCCCTAAATCCTCTTTAGAGGTGCACCAAAAGTGTTGGGATTGTCCCAAGGTTGGACTTGGGAGTATTGTTGATTCTCTTGATGATGATGACAGGAACTTACCTGAGAAAGATAAAGTTATCCCTTCATCTAATAGTAATAGTAAGACTATACTGTTTGGGTCTCAGATTAGGAGTAAAGGCACCCCGAATTCGCCCACCTGTGCCGAGTTTTGTGAGGCGCCTAAGTCGTTGCCTAAAAACTATGCAGTTTTCCCCCATGCTAGGTTGACAAGGCCTTCTAATCTTCAAAAGGGTAGCTCTGATGTTTTATTTGAGATTGGAGGAGACCCTTTAGAGTCTGACCAATTTGGGAAAATCCAGTCTTTTTCTTTGGATTCCAAGAGGATAGGGTCGAGGTTGAGCAATCGCAATGTAGAGTCAAGGATCAGGCATTCTTGTTTTGAGAACGAGACAATTGAGAAGAGCTTGAGTTTTGATTTGATCGGAGGAGGTCTGAATAAGCCGACTACAGGTACAATGTCGGGGAATGAAATAACTCGATCTCTCACACCTGAAGAGATTGAGCTCTCAGAGGACTATACATGTGTAATTTCACATGGTCCCAACCCCAGAACTACTCATATTTTTGGTGACTGTGTTTTGAAAAGTCACCCTAATGGAATTGATCCTGGAAATAAGGGAGAGACTAGATTGCCTTGTATGGAAAACTGTGTATCATCACCATATCCTTCAAATGATTTCTTGAGTTGCTGCTACTTTTGCAAGCAGAAGCTGGTAGAGGGCAAAGACATATACATGTATAGAGGTGAGAAAGCTTTCTGCAGTTGGGATTGCCGTTTGGAGGAGATTTCCATTGAGGAGAAGCAGGAGACTAACATGACCGAGGCTCCCACAGAATCTCCCAAATCCGAAAACGGTGACGACATTTTTGAGAAAAGCATGTTCGTTGCTATATAGAGAAAATTTATCAATTGCTTTCCCTTAAGTCATTATGCCCGTGATTGATGAAATTGCCTGAGTTTGATCATCTGATAATAAAGAGCTGTGTCTTTTGTGTATCTATTAGCAGCCTCAGCTCAGGTGGTCATTTCATGGCATGTTTAGTAGGACCTCTTATTTCAATTCATCTCTTATGGTTCTAACGACTCTTGGAAAGCTAATCGGCTAGATTCTTATGATTTTGACCTTAGTTATAAAAGCTGAGAATGGCTTGTTTTACCATTTCTGCTAATATCTTCCTTCATCTGGAACTGTGAAAAACCATTAAAAAAAAGAACTCTTTTTTTTGTTCCTTCTTTTTTGGTTTACCATTTTGAAAGGAGTTGATGTATAAGCCTCCCATCTGAACAAATTATTGACATTAATATATAAAATAGTATTTTTTTTTTTTTTTGGATATAAAACCTTGAATATTTTGTTGAAATATGATTCTTAT ATGATGATGTTGAAGAAAAGAAGTAGATCAATTGCGCAAGAACAACAAAACATGGGTCCAATAACATCAGATGATGGTTCTGAATCAGGTTTACAATGTGATTTTTTAGGGCAAAGGCAAAAGACCAACTCTTTTTTTAATGTTCCTGGTCTGTTTGTAGGATTAACCCCAAAAGTTGCCTCAGATTGTGACTCAGTTAGAAGCCCAACTTCACCTCTTGACTTTAAGTTGTTCTGTAATTTGGGCACTTCCTTTAGGTTCCCTAAATCCTCTTTAGAGGTGCACCAAAAGTGTTGGGATTGTCCCAAGGTTGGACTTGGGAGTATTGTTGATTCTCTTGATGATGATGACAGGAACTTACCTGAGAAAGATAAAGTTATCCCTTCATCTAATAGTAATAGTAAGACTATACTGTTTGGGTCTCAGATTAGGAGTAAAGGCACCCCGAATTCGCCCACCTGTGCCGAGTTTTGTGAGGCGCCTAAGTCGTTGCCTAAAAACTATGCAGTTTTCCCCCATGCTAGGTTGACAAGGCCTTCTAATCTTCAAAAGGGTAGCTCTGATGTTTTATTTGAGATTGGAGGAGACCCTTTAGAGTCTGACCAATTTGGGAAAATCCAGTCTTTTTCTTTGGATTCCAAGAGGATAGGGTCGAGGTTGAGCAATCGCAATGTAGAGTCAAGGATCAGGCATTCTTGTTTTGAGAACGAGACAATTGAGAAGAGCTTGAGTTTTGATTTGATCGGAGGAGGTCTGAATAAGCCGACTACAGGTACAATGTCGGGGAATGAAATAACTCGATCTCTCACACCTGAAGAGATTGAGCTCTCAGAGGACTATACATGTGTAATTTCACATGGTCCCAACCCCAGAACTACTCATATTTTTGGTGACTGTGTTTTGAAAAGTCACCCTAATGGAATTGATCCTGGAAATAAGGGAGAGACTAGATTGCCTTGTATGGAAAACTGTGTATCATCACCATATCCTTCAAATGATTTCTTGAGTTGCTGCTACTTTTGCAAGCAGAAGCTGGTAGAGGGCAAAGACATATACATGTATAGAGGTGAGAAAGCTTTCTGCAGTTGGGATTGCCGTTTGGAGGAGATTTCCATTGAGGAGAAGCAGGAGACTAACATGACCGAGGCTCCCACAGAATCTCCCAAATCCGAAAACGGTGACGACATTTTTGAGAAAAGCATGTTCGTTGCTATATAG MMMLKKRSRSIAQEQQNMGPITSDDGSESGLQCDFLGQRQKTNSFFNVPGLFVGLTPKVASDCDSVRSPTSPLDFKLFCNLGTSFRFPKSSLEVHQKCWDCPKVGLGSIVDSLDDDDRNLPEKDKVIPSSNSNSKTILFGSQIRSKGTPNSPTCAEFCEAPKSLPKNYAVFPHARLTRPSNLQKGSSDVLFEIGGDPLESDQFGKIQSFSLDSKRIGSRLSNRNVESRIRHSCFENETIEKSLSFDLIGGGLNKPTTGTMSGNEITRSLTPEEIELSEDYTCVISHGPNPRTTHIFGDCVLKSHPNGIDPGNKGETRLPCMENCVSSPYPSNDFLSCCYFCKQKLVEGKDIYMYRGEKAFCSWDCRLEEISIEEKQETNMTEAPTESPKSENGDDIFEKSMFVAI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15579.1 vs. NCBI nr
Match: gi|902178605|gb|KNA09183.1| (hypothetical protein SOVF_155730 [Spinacia oleracea]) HSP 1 Score: 801.6 bits (2069), Expect = 6.400e-229 Identity = 386/388 (99.48%), Postives = 387/388 (99.74%), Query Frame = 1
BLAST of Spo15579.1 vs. NCBI nr
Match: gi|731320389|ref|XP_010670779.1| (PREDICTED: uncharacterized protein LOC104887750 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 555.1 bits (1429), Expect = 1.000e-154 Identity = 303/428 (70.79%), Postives = 336/428 (78.50%), Query Frame = 1
BLAST of Spo15579.1 vs. NCBI nr
Match: gi|870865867|gb|KMT16905.1| (hypothetical protein BVRB_2g043780 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 540.4 bits (1391), Expect = 2.600e-150 Identity = 292/413 (70.70%), Postives = 323/413 (78.21%), Query Frame = 1
BLAST of Spo15579.1 vs. NCBI nr
Match: gi|225430122|ref|XP_002284674.1| (PREDICTED: uncharacterized protein LOC100247517 [Vitis vinifera]) HSP 1 Score: 369.0 bits (946), Expect = 1.100e-98 Identity = 215/419 (51.31%), Postives = 266/419 (63.48%), Query Frame = 1
BLAST of Spo15579.1 vs. NCBI nr
Match: gi|223544418|gb|EEF45939.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 364.0 bits (933), Expect = 3.400e-97 Identity = 217/423 (51.30%), Postives = 270/423 (63.83%), Query Frame = 1
BLAST of Spo15579.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QR75_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_155730 PE=4 SV=1) HSP 1 Score: 801.6 bits (2069), Expect = 4.400e-229 Identity = 386/388 (99.48%), Postives = 387/388 (99.74%), Query Frame = 1
BLAST of Spo15579.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CT11_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043780 PE=4 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 1.800e-150 Identity = 292/413 (70.70%), Postives = 323/413 (78.21%), Query Frame = 1
BLAST of Spo15579.1 vs. UniProtKB/TrEMBL
Match: F6H3G9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04490 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 7.400e-99 Identity = 215/419 (51.31%), Postives = 266/419 (63.48%), Query Frame = 1
BLAST of Spo15579.1 vs. UniProtKB/TrEMBL
Match: B9RS79_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0803520 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 2.400e-97 Identity = 217/423 (51.30%), Postives = 270/423 (63.83%), Query Frame = 1
BLAST of Spo15579.1 vs. UniProtKB/TrEMBL
Match: B9H9E3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s26160g PE=4 SV=2) HSP 1 Score: 352.8 bits (904), Expect = 5.500e-94 Identity = 212/421 (50.36%), Postives = 263/421 (62.47%), Query Frame = 1
BLAST of Spo15579.1 vs. ExPASy Swiss-Prot
Match: MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana GN=MARD1 PE=2 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 2.500e-15 Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 1
BLAST of Spo15579.1 vs. TAIR (Arabidopsis)
Match: AT2G25690.1 (Protein of unknown function (DUF581)) HSP 1 Score: 151.8 bits (382), Expect = 9.300e-37 Identity = 120/333 (36.04%), Postives = 165/333 (49.55%), Query Frame = 1
BLAST of Spo15579.1 vs. TAIR (Arabidopsis)
Match: AT5G11460.1 (Protein of unknown function (DUF581)) HSP 1 Score: 151.8 bits (382), Expect = 9.300e-37 Identity = 126/360 (35.00%), Postives = 174/360 (48.33%), Query Frame = 1
BLAST of Spo15579.1 vs. TAIR (Arabidopsis)
Match: AT3G22550.1 (Protein of unknown function (DUF581)) HSP 1 Score: 102.4 bits (254), Expect = 6.500e-22 Identity = 53/127 (41.73%), Postives = 74/127 (58.27%), Query Frame = 1
BLAST of Spo15579.1 vs. TAIR (Arabidopsis)
Match: AT3G63210.1 (Protein of unknown function (DUF581)) HSP 1 Score: 84.7 bits (208), Expect = 1.400e-16 Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 1
BLAST of Spo15579.1 vs. TAIR (Arabidopsis)
Match: AT1G22160.1 (Protein of unknown function (DUF581)) HSP 1 Score: 67.0 bits (162), Expect = 3.000e-11 Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15579.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15579.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15579.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo15579.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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