Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAATTGTTAAAATCAAAATTAATTTCCAACTTAAATTAATTTAAAAACTATTTCCCGTGGTATCGTCCACAAGTTTCGGGAATGTTTTTTTTTTTTTTAAGCAGAAATCCACAATTTAAAATATTAAACCGCTAATTGTAATGGAAAACATTAAGCATCATCTCATCTTCATTAACTGACTCAACCAACTACCAGCTAGTGAGAGAAACGGAGAGTAGTGAAGAGAGAGAAAATGTCCGGAGCAAGGAAGACGGTGTGTGTCACCGGAGCTTCCGGTTACATCGCTTCATGGCTAGTCAATCTCCTTCTTCAGCGCGGTTACACCGTCAATGCCACCGTTCGTGATCTCAGTTTGTTTCTCTCTCCTCCTTTTTTGTTTTCATCAGAATTTCAATTTTGTTTACTTGTTCATTGCTGAATTTTGGTCATTTTGTTTCTTAATCATAATCGATGATGTAACTGAGTTGTTCTGTTCAAATTTCTAGGGTTTTCCGATGATTATTGTGTATGAATGTATGCTGTTTTGTTTTGTTTTGTTGAATTATGGTCTGTTTTTTTGTGTGATCATAATCGATGATATAATAGAGATATTCTTTTTGAATTCGGGGCTTTCTGATGATGATTTTGTGTGATGTTTTTTCTTTTGCTGGATTAAGCAATTGTGATTAAAATGTCCTAGTTGTCGTAAACTCGTAATTCGACTCATAATTTAGAATAAGGTGTGTGTCTGATGATAATGATGTGTGTGTCTGATGTTTATTTTGTGGTTGACATTTGTGATTAAAATGTCCTAATTGTCCTAATTCTATCCCATAGTTTGGATTTTGGGATAAGGTGTGTGTCTCATGCCTATTTTTTGTTGAAATTTGTGATTAAAATGTCCTATTTTTGGTAATTTTGCCCCGTAATTTGGGATAAGGTGTATGTCTTATGATTATTTTTGTTGAAATTTGTGAATAATCTTAATTTCTTTCAATGCATTTGTGATTGTGTTTGTCAACTAATTTTTGGTAGTGGGTGCTAGTATAAGGTTTACTTAGGATAGATGAAGAAGAATTGAGGATGCCGTTGACTGCTGATGAGGTTAAGGTAGAGGCTGAGATGTATCATGTATGTAGTCTTATGCCAAGGATTCAATAGTACCCGATTGGTTTGGCTTATAGTTAATGTAATATGTAATTCTTAGATCCAACTCGTCAACTGAACCGAACTTATGAGAAAAACCTCAAAACTTGATCAGCTTTAATCTGATTAGCTCGAATTTAACCCAATTCAATCGATTTGTGTCTTATGCAGCTTGTAAAATGGTTTATAATTGTAATTGACCCGAATCATTCCCCTTGATACTTATTGTGGTCTTTATAGAGAGCAATGGGAAAGTGGAAGGAAAAGGGAAAGGGAATTTTTCTCTTCCTTCTCTTTTGTCTGTGTTTGCTTATTCATTTTGCCCTTAATGGGTTCAGCTCAAAGTCTTTCCACAATCCACAACCGTTTTGATTTCCATTCCCTCTATCAACCCCTGTATTTGTTGTCACCACCATTGTTCTACCCTCCCACCGAAAGTATTAGCCCTCCTCTGAAAGCCACTTCTCCCTTTTTGCCTCCATATTACCCCTATTCAGTAAAGGTGTTCCTAGTATCTTTCAAAAATTCAATCCAGATAAAACTACCCCTAAGTGGACAGAGAAGTAGAGAACAAATGTAGACTTGTGATTAAATAGGATTTGTGGAATTGTGAGTGTTAAGTGAGAAGTAGTATGTAAATGCTCTGGAGTCTATGTGCAGGAACTGTAAATGGAAATTTCTGTAAGCATAATGTAAAGAGTATGTTTCGTGGGTAACTGGGAGTGAATACCTTTGTAGTGGTAGCCATTAAGGCATCAATTTTTTTTATTTGACAAGAAAAGAAGTGGTAGGCTGGTAGCCATTAACTAAGTCCTACACTGAAGTAGTCTGGGTCAATGTGCTCTATATTTGTCTTTGTCATTCTCATTTGTTACATGCATGTTAAAACTTTGTCTTCGTGTTAAGTCTCTTAATAGCCCATGAATTGTTTCAAGCACTTGGAATTAGTGTGAGTTAAAAATTAGGTAACAACGAGAGGTGCTAGGGGGAGAATTGACGTTTGGGCGAGTGAAAATAAGGTAACAATGGGAGGAGCTGGGGATGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGACGAGGTTTTCCATAGAAAGTATCTAATGATCTGTTTTGTCCTTGAGAATTATTTTTCCTACATAAAAAATGTATCTGATTATAAGCTGACAGATTGGGGAATGAATCAATCAGGTTTTCTGAAGGAATATGTCAACGCTTTGCAAATTAGTTGAGATATGTCCAAATATGAAACTATCTTCTCTCGGTCCTATGTGTACACCAACTCTTTGAAATTTGTATCAGTCCTTATTTATATATATAAAATAAATCTTAATTTGGATAGCTAATTTATAGAGAAGTTTCATTTTTATTGCAGATGATCCAAAGAAAGTTGAGCACTTGCGTTCTCTAGATGGAGCTAAGGATCGGCTTCACTTGTTTACTGCAAACCTATTGGAGGAGGGATCTTTTGATGCTGCTGTGGAGGGGTGCGAAGGTGTTTTTCACACTGCTTCTCCCTTCTACCATGATGTTAAAGACCCAGAGGTTCAACTTTTTCTTTGCTCATTTCTTTGTTTCTTTTCTTTCATGATGCTCATTAAACATGGAAAAGTTACGGGTTTTTCATTCTTTACTGTACTAGTGGCCTATGGACTGTACATGTGTTCCTACGTAGACAAGTTCTTTGTAAGCCTTCTCATTTGTAGTTGTCATTGTTGTAGGAGAGGGGTTCTGTAATTGTCATTGTTGTAGGAGAGCGGTTCATAAAATACTCAGAAAGTAGCATTTACAAGATGAGACCAACTACCATTAGTGTTGCTGCCTTTTATAAACCTGCTAGTCTGGTGCCAGCATCGCCGCATCGGTTTTGTGGTGATCGTTCGCTAACTTGTTTTTGTAGTATTTCTATTACTATTGTATAACTTTTCCGGTGGGATGGAGCTGGCAAGTGGCATCCATATAGTTTGTTGAAATGGAACAATGTTAGCAGAATAGTGCACCAAGTTTTAAGTAGATGTTTTTGATGTTAAGCAGTGATGTTTCTGTGGCTTTGGTTTATAGCTGATTCTTTCCTTCTTGACTTCTTCATATCAGGTTGAATTGCTTGATCCTGCTTTGAAGGGAACACTTAATGTTCTCAATGCCTGTGCAAAAGTCCCATCAATAAAAAGAGTGGTGCTGACATCTTCAATTGCAGCAGTTGCATACAATGGAAAACCTCGAACTCCGGAAGTGGTTGTTGATGAAACCTGGTTTTCTGATCCAAATCTCTGTAGGGAAACAAAGGTGCGTAATTGTCTTGGACCTGTAGTCAAATTTTTGTCCTTTGCTTTCTTTGTTGCTATAAGTGACCAGCAAACAGGGGTACTTCTAGAAATATGTGATCCTGGTAGACATAAGTTAACCAATGCCAGCCCCTTGATGTGTCTTCCATGTATAGACTATACGGAACTGAAGCTGCATTCAGCATTAGGACAGTTAATACTTCATATTGTTTAAATGTTTAATGTGCTAAGTTTTAAATATCATCATATATCTACAAGTCCATACTAGGAATTCCTAATAATCAGGTAGCTTAATCGTATTTTTGGTGTTTTTATGGCTTAACGAAACTGCAAATGCAGAGTATTATAGGCAAGTAATTGATTGTATTAGCTAATCAGCGTAATTAACTAATTACAACCTTCCCACTATCGAGAGGTGGAAATTCTCTCCCAATTTTTAATCTTATGAGTTGCTGCAGATGTGGTATATGCTCTCTAAAACTCTGGCCGAGGAAGCTGCATGGAAGTTTGTGAAAGAGAAGGGTATTGATATGGTTACGATAAATCCAGCAATGGTTATTGGACCATTGTTGCAGCCAACACTCAACACAAGTGCAGCTGCAATAGGGAGCTTATTCACTGGTATGCATCATGCGAGAAATTGTTATTGTTTTTTGTGAGGCCAGAACCTTTAAACCACAGCAATTAAGTAACAGGTTTGCTGACTGCTATGCTTTTGTTCTTTTTCCTATCTATGCAGGGTCAGAAACTTTTAAAAACATGGCACCCGGTTGGGTTAATGTTAAAGATGTTGCCATGGCACATATCCTGGCACTTGAGGTCCCTTCTGCTAAAGGGAGGTACTGTTTAGTTGAAAGGGTCGCCCATTATTCAGATCTTGTGAAGGAGTTAAAAGAGCTTTACCCGAATGCCGCACTCCCTGAAAAGTAAGTTGTTTCATCTTCAGTATTTCCTTCTGTTTATGTACCCTGTCATATCTTCCGAGATTCCTTATTGATAACTTGCTGAACCTCCAAAAAAATTTCAGGTGTGTAGATGACAAACCTTTGGCACCAGTTTACCAGGTCTCTAAAGAGAAAACTCAAAGTTTGGGCATCGACTATATTCCTCTTAAAACGAGCCTCAAGGAGACTGTGGAAAGCCTGAAGGAGAAGGGATTTATTAGCATTTGA AAATTGTTAAAATCAAAATTAATTTCCAACTTAAATTAATTTAAAAACTATTTCCCGTGGTATCGTCCACAAGTTTCGGGAATGTTTTTTTTTTTTTTAAGCAGAAATCCACAATTTAAAATATTAAACCGCTAATTGTAATGGAAAACATTAAGCATCATCTCATCTTCATTAACTGACTCAACCAACTACCAGCTAGTGAGAGAAACGGAGAGTAGTGAAGAGAGAGAAAATGTCCGGAGCAAGGAAGACGGTGTGTGTCACCGGAGCTTCCGGTTACATCGCTTCATGGCTAGTCAATCTCCTTCTTCAGCGCGGTTACACCGTCAATGCCACCGTTCGTGATCTCAATGATCCAAAGAAAGTTGAGCACTTGCGTTCTCTAGATGGAGCTAAGGATCGGCTTCACTTGTTTACTGCAAACCTATTGGAGGAGGGATCTTTTGATGCTGCTGTGGAGGGGTGCGAAGGTGTTTTTCACACTGCTTCTCCCTTCTACCATGATGTTAAAGACCCAGAGGTTGAATTGCTTGATCCTGCTTTGAAGGGAACACTTAATGTTCTCAATGCCTGTGCAAAAGTCCCATCAATAAAAAGAGTGGTGCTGACATCTTCAATTGCAGCAGTTGCATACAATGGAAAACCTCGAACTCCGGAAGTGGTTGTTGATGAAACCTGGTTTTCTGATCCAAATCTCTGTAGGGAAACAAAGATGTGGTATATGCTCTCTAAAACTCTGGCCGAGGAAGCTGCATGGAAGTTTGTGAAAGAGAAGGGTATTGATATGGTTACGATAAATCCAGCAATGGTTATTGGACCATTGTTGCAGCCAACACTCAACACAAGTGCAGCTGCAATAGGGAGCTTATTCACTGGGTCAGAAACTTTTAAAAACATGGCACCCGGTTGGGTTAATGTTAAAGATGTTGCCATGGCACATATCCTGGCACTTGAGGTCCCTTCTGCTAAAGGGAGGTACTGTTTAGTTGAAAGGGTCGCCCATTATTCAGATCTTGTGAAGGAGTTAAAAGAGCTTTACCCGAATGCCGCACTCCCTGAAAAGTGTGTAGATGACAAACCTTTGGCACCAGTTTACCAGGTCTCTAAAGAGAAAACTCAAAGTTTGGGCATCGACTATATTCCTCTTAAAACGAGCCTCAAGGAGACTGTGGAAAGCCTGAAGGAGAAGGGATTTATTAGCATTTGA ATGTCCGGAGCAAGGAAGACGGTGTGTGTCACCGGAGCTTCCGGTTACATCGCTTCATGGCTAGTCAATCTCCTTCTTCAGCGCGGTTACACCGTCAATGCCACCGTTCGTGATCTCAATGATCCAAAGAAAGTTGAGCACTTGCGTTCTCTAGATGGAGCTAAGGATCGGCTTCACTTGTTTACTGCAAACCTATTGGAGGAGGGATCTTTTGATGCTGCTGTGGAGGGGTGCGAAGGTGTTTTTCACACTGCTTCTCCCTTCTACCATGATGTTAAAGACCCAGAGGTTGAATTGCTTGATCCTGCTTTGAAGGGAACACTTAATGTTCTCAATGCCTGTGCAAAAGTCCCATCAATAAAAAGAGTGGTGCTGACATCTTCAATTGCAGCAGTTGCATACAATGGAAAACCTCGAACTCCGGAAGTGGTTGTTGATGAAACCTGGTTTTCTGATCCAAATCTCTGTAGGGAAACAAAGATGTGGTATATGCTCTCTAAAACTCTGGCCGAGGAAGCTGCATGGAAGTTTGTGAAAGAGAAGGGTATTGATATGGTTACGATAAATCCAGCAATGGTTATTGGACCATTGTTGCAGCCAACACTCAACACAAGTGCAGCTGCAATAGGGAGCTTATTCACTGGGTCAGAAACTTTTAAAAACATGGCACCCGGTTGGGTTAATGTTAAAGATGTTGCCATGGCACATATCCTGGCACTTGAGGTCCCTTCTGCTAAAGGGAGGTACTGTTTAGTTGAAAGGGTCGCCCATTATTCAGATCTTGTGAAGGAGTTAAAAGAGCTTTACCCGAATGCCGCACTCCCTGAAAAGTGTGTAGATGACAAACCTTTGGCACCAGTTTACCAGGTCTCTAAAGAGAAAACTCAAAGTTTGGGCATCGACTATATTCCTCTTAAAACGAGCCTCAAGGAGACTGTGGAAAGCCTGAAGGAGAAGGGATTTATTAGCATTTGA MSGARKTVCVTGASGYIASWLVNLLLQRGYTVNATVRDLNDPKKVEHLRSLDGAKDRLHLFTANLLEEGSFDAAVEGCEGVFHTASPFYHDVKDPEVELLDPALKGTLNVLNACAKVPSIKRVVLTSSIAAVAYNGKPRTPEVVVDETWFSDPNLCRETKMWYMLSKTLAEEAAWKFVKEKGIDMVTINPAMVIGPLLQPTLNTSAAAIGSLFTGSETFKNMAPGWVNVKDVAMAHILALEVPSAKGRYCLVERVAHYSDLVKELKELYPNAALPEKCVDDKPLAPVYQVSKEKTQSLGIDYIPLKTSLKETVESLKEKGFISI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15611.1 vs. NCBI nr
Match: gi|902234357|gb|KNA23415.1| (hypothetical protein SOVF_024990 [Spinacia oleracea]) HSP 1 Score: 573.9 bits (1478), Expect = 1.700e-160 Identity = 289/339 (85.25%), Postives = 304/339 (89.68%), Query Frame = 1
BLAST of Spo15611.1 vs. NCBI nr
Match: gi|731325759|ref|XP_010673676.1| (PREDICTED: cinnamoyl-CoA reductase 1-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 562.8 bits (1449), Expect = 4.000e-157 Identity = 278/323 (86.07%), Postives = 295/323 (91.33%), Query Frame = 1
BLAST of Spo15611.1 vs. NCBI nr
Match: gi|731325757|ref|XP_010673675.1| (PREDICTED: cinnamoyl-CoA reductase 1-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 550.4 bits (1417), Expect = 2.000e-153 Identity = 277/338 (81.95%), Postives = 294/338 (86.98%), Query Frame = 1
BLAST of Spo15611.1 vs. NCBI nr
Match: gi|743837743|ref|XP_011025551.1| (PREDICTED: cinnamoyl-CoA reductase 1-like [Populus euphratica]) HSP 1 Score: 528.5 bits (1360), Expect = 8.300e-147 Identity = 258/322 (80.12%), Postives = 287/322 (89.13%), Query Frame = 1
BLAST of Spo15611.1 vs. NCBI nr
Match: gi|743864898|ref|XP_011032045.1| (PREDICTED: cinnamoyl-CoA reductase 1-like [Populus euphratica]) HSP 1 Score: 528.1 bits (1359), Expect = 1.100e-146 Identity = 257/322 (79.81%), Postives = 287/322 (89.13%), Query Frame = 1
BLAST of Spo15611.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV58_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024990 PE=4 SV=1) HSP 1 Score: 573.9 bits (1478), Expect = 1.200e-160 Identity = 289/339 (85.25%), Postives = 304/339 (89.68%), Query Frame = 1
BLAST of Spo15611.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CLD0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g073000 PE=4 SV=1) HSP 1 Score: 562.8 bits (1449), Expect = 2.800e-157 Identity = 278/323 (86.07%), Postives = 295/323 (91.33%), Query Frame = 1
BLAST of Spo15611.1 vs. UniProtKB/TrEMBL
Match: A0A059D8V2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03696 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 2.900e-146 Identity = 255/320 (79.69%), Postives = 284/320 (88.75%), Query Frame = 1
BLAST of Spo15611.1 vs. UniProtKB/TrEMBL
Match: A0A059D9A6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03695 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 2.900e-146 Identity = 256/322 (79.50%), Postives = 281/322 (87.27%), Query Frame = 1
BLAST of Spo15611.1 vs. UniProtKB/TrEMBL
Match: B9HNY0_POPTR (Cinnamyl-alcohol dehydrogenase family protein OS=Populus trichocarpa GN=POPTR_0009s05670g PE=4 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 6.400e-146 Identity = 254/322 (78.88%), Postives = 287/322 (89.13%), Query Frame = 1
BLAST of Spo15611.1 vs. ExPASy Swiss-Prot
Match: CCR1_ARATH (Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 2.700e-81 Identity = 160/324 (49.38%), Postives = 222/324 (68.52%), Query Frame = 1
BLAST of Spo15611.1 vs. ExPASy Swiss-Prot
Match: CCR2_ARATH (Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 5.300e-77 Identity = 154/321 (47.98%), Postives = 212/321 (66.04%), Query Frame = 1
BLAST of Spo15611.1 vs. ExPASy Swiss-Prot
Match: TKPR1_ARATH (Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=1 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 7.400e-71 Identity = 147/325 (45.23%), Postives = 208/325 (64.00%), Query Frame = 1
BLAST of Spo15611.1 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 5.300e-61 Identity = 137/332 (41.27%), Postives = 196/332 (59.04%), Query Frame = 1
BLAST of Spo15611.1 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 3.500e-60 Identity = 138/328 (42.07%), Postives = 190/328 (57.93%), Query Frame = 1
BLAST of Spo15611.1 vs. TAIR (Arabidopsis)
Match: AT5G19440.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 503.4 bits (1295), Expect = 1.000e-142 Identity = 239/320 (74.69%), Postives = 278/320 (86.88%), Query Frame = 1
BLAST of Spo15611.1 vs. TAIR (Arabidopsis)
Match: AT1G51410.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 481.1 bits (1237), Expect = 5.400e-136 Identity = 228/321 (71.03%), Postives = 272/321 (84.74%), Query Frame = 1
BLAST of Spo15611.1 vs. TAIR (Arabidopsis)
Match: AT1G09480.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 362.8 bits (930), Expect = 2.100e-100 Identity = 180/319 (56.43%), Postives = 229/319 (71.79%), Query Frame = 1
BLAST of Spo15611.1 vs. TAIR (Arabidopsis)
Match: AT1G09510.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 353.6 bits (906), Expect = 1.300e-97 Identity = 176/319 (55.17%), Postives = 230/319 (72.10%), Query Frame = 1
BLAST of Spo15611.1 vs. TAIR (Arabidopsis)
Match: AT1G09490.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 352.1 bits (902), Expect = 3.800e-97 Identity = 176/319 (55.17%), Postives = 225/319 (70.53%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15611.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15611.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15611.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo15611.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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