Spo15651 (gene)

Overview
NameSpo15651
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHistone superfamily protein
Locationchr4 : 6258025 .. 6261299 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTATCGAAGTGTCCATATCCATGTCCGAGTGTCGAGGATTCGACACAGGTATTTGAGGTAAAATGAAGAGTCTGGGCAACAAAGAATGTAGGTCTTGAAAGTTACTTATTTCGTAATGAAGCGTGTGCCTGCATGATATTGATGTACATGTTCTTTGTTCAGTGCTGAGAGACTAAATAAGTTAGACAAATGTGTGAGTGTGGCAGCAAATTATGTCGTCGCTGCTTGTATACAAGGGAGTGTAATTAAGAGAGTTAGTTTTCTGTGAATGTGACTGATAGAGTGATTTGGGGGGATGTAAAGAGCTGATAAAAATGATCTATTTTCTGAGGCAGTTTGGTGAAATTGATTGGCTTCTTTTGTTTTCAATTGGGTATTGGTCTGTTGTGTGTTGTACATGGAGATTGTTCAATTTATTGGTTTTTGTTTGCCATTATTAATAGTAGAGATTATTTTTGAGATGATGAATGATATTGTTCTCATTCTAGATGGTAATTGCTCATGTTTGCTCATTTGTCCATTTTCATATCAATTCTTCTTGCCTAGGCTCTTACAGTTTTGTGAGATGACACGCCAAAAAAAGTTCGGGTTTGGGCAGAAAACTTTGCGTAGTTTCATTTTTATATTTTTTTGGCGGGTTTTTGGGACTATGTTTTCAATCCCAAATAAGGAAATTTATGCTAATTTAATTTTAGTCCCAACTCGGTTTTACTCTTACATATGTTACTCAACCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCCTTTTCTATAATATATTAGGAGTTAGACACACTATATCATCTTTTCTGCAAAGTATCACTATTTTAGCGACCCTTTTTTTTGGTAAAAAACGGATGGGCTAATAGATTAAGAAATTAAAAGAGTTTGACATAGAGTTAAAAACAAAAAGAAGACAATTAGGGTACATCATAAACATAGGATTAGGGTACATATAGCGACCCTTGATTTACAGTTTTAATTCATATCTAACTTTTTCCCTCAAACAAATCATCTAACATAGCGAGATTACTCTTTTTCCGCACTTAAGCGCATAACGTGCAATTAGACTTCCCGTTTAGTTGCTGAAAGATAAAGATAAGCTAACGAGTTCATGCTTACCCCCCTTAGGGATCTAAATGATTTATAGTTGTCTACTATCGCTAGAGTAAGCTTAGCGGCTTGTACTGCTTACATCATTAAACATGCCAATCTCTCTGGGAGACTGACCCTAAAGATAGAGTTTCAAGAACCGTTAGCTCTATTGGATCCCCTAGATGCTCTATCAAAATCCATCGCTATTCCTTTCCTCCACCGAGAAGGCGAGAAAGGTGAGTTGAGCTTTTCCACCTAGTCAAAGCCAACCAGCTGCTGGCCTGCTGCACCAGTCAGGCCAGAGAACAGATAGGGGTCAATTTCTCATACTTTGTACTTAACTAGACTAGAAGTGTTTACATGTATTTTTTCACAAATTCTTATTTACAATGGGTGTACAATATTTATTGTACACCGAAGTAAAAGTTAACACAAAATGCTTAAAAGTTAAGCTTATATATGTAAAAGTTATCTATTTTTAAGTAATAAATTTTTTCATTTTAGTAAAACTTATTTCTTCAATAATGTATAAAATCAATCATTTAACCTTTCAAAATATTTATCTATTAATTCTTTTTACTAATATAAAAGTTAATCAAAATTAGGTTAAAGTTATAAAAAAAAAAGGTTAAAGTTATCTTGGTGTACAATAAATTTATTGTACACCTTGTGCGCGCAAGACCTATTGGTATTTTTTTGACGAAGGCCCGGAATGCCAAAACACCTTTTGTTATTCAAATATCTACATCTATATCGAAATTTCACGAGAACAAAGTTATTGTGTACTACACAATAACGAACTTAATTAAAAGCTCAAACACGACCACATTTGTTAATGTGGCAATACAAACTATAAATAAAGGGACCACAAACATGTAATATATCGTATATAAACCATCGGTCTAAATTACTAGCCTAAAAGGCTAAAACATCACAAGCTTTGTTAGTGTTATTGTCATATGAACATAGACCCATTGATGAATAATGGTCATAGACCCATTGATGAATAATTGTCATATGTTAGTGTTGTCATATGAATAATGGTCATTGACCCATTGACCCATTGACCCATAAACTACAATCTTACCAATACAATGATACAATGTCTAATAGCCAGTCGGCCCAATAGGCTTTTAACAACAGAAAAAGAAAAGACACGTGGTCAAATATCATTGGTTGAAGGACGAAAACACGGATCGCTGTCTAAACCACTCTACAAAACAATCTCCCAACCGTCGATTAATATAATCTTTAATCCAACGCCTTAAATTCATTTCCCCAAAAAATCTCTTTTTCAGTTTTTCCCCACTGCCAAAAGTTTCAAATATTCCCGCTCTCTCCCCTCCCTATAAATACTCCCAACTCCCTCCTCCCATTACACAAAGCAACTCACACTCAAAAGAGAGAGAAAAAACACAATCACAAAAAGCCCAGAAAACCACCACAAAAAGCTTCAAGTTCATCAACAATGGCGAGAACTAAGCAAACAGCAAGGAAATCCACCGGAGGAAAAGCTCCAAGGAAGCAGCTCGCAACCAAAGCTGCTCGCAAATCAGCTCCGGCAACCGGCGGAGTGAAGAAGCCACACAGATTCAGGCCAGGAACCGTCGCTCTCCGTGAAATCCGCAAGTACCAGAAGAGCACTGAGCTTCTCATCAGGAAGCTTCCATTCCAGAGGCTTGTAAGAGAAATCGCTCAAGATTTCAAAACCGATCTTCGTTTCCAGAGCTCTGCTGTTGCTGCTCTTCAGGAAGCTGCTGAGGCTTACCTTGTTGGTTTGTTCGAGGATACTAATTTGTGCGCGATTCATGCTAAGAGAGTCACTATCATGCCTAAGGATATCCAGCTTGCTAGGAGGATCCGTGGAGAGCGTGCTTAG

mRNA sequence

ATGAAGTATCGAAGTGTCCATATCCATGTCCGAGTGTCGAGGATTCGACACAGTGCTGAGAGACTAAATAAGTTAGACAAATGTGTGAGTGTGGCAGCAAATTATGTCGTCGCTGCTTGTATACAAGGGAGTGTAATTAAGAGATTGTCTACTATCGCTAGAGTAAGCTTAGCGGCTTGTACTGCTTACATCATTAAACATGCCAATCTCTCTGGGAGACTGACCCTAAAGATAGAGTTTCAAGAACCGTTAGCTCTATTGGATCCCCTAGATGCTCTATCAAAATCCATCGCTATTCCTTTCCTCCACCGAGAAGGCGAGAAAGTTTTTCCCCACTGCCAAAAGTTTCAAATATTCCCGCTCTCTCCCCTCCCTATAAATACTCCCAACTCCCTCCTCCCATTACACAAAGCAACTCACACTCAAAAGAGAGAGAAAAAACACAATCACAAAAAGCCCAGAAAACCACCACAAAAAGCTTCAAGTTCATCAACAATGGCGAGAACTAAGCAAACAGCAAGGAAATCCACCGGAGGAAAAGCTCCAAGGAAGCAGCTCGCAACCAAAGCTGCTCGCAAATCAGCTCCGGCAACCGGCGGAGTGAAGAAGCCACACAGATTCAGGCCAGGAACCGTCGCTCTCCGTGAAATCCGCAAGTACCAGAAGAGCACTGAGCTTCTCATCAGGAAGCTTCCATTCCAGAGGCTTGTAAGAGAAATCGCTCAAGATTTCAAAACCGATCTTCGTTTCCAGAGCTCTGCTGTTGCTGCTCTTCAGGAAGCTGCTGAGGCTTACCTTGTTGGTTTGTTCGAGGATACTAATTTGTGCGCGATTCATGCTAAGAGAGTCACTATCATGCCTAAGGATATCCAGCTTGCTAGGAGGATCCGTGGAGAGCGTGCTTAG

Coding sequence (CDS)

ATGAAGTATCGAAGTGTCCATATCCATGTCCGAGTGTCGAGGATTCGACACAGTGCTGAGAGACTAAATAAGTTAGACAAATGTGTGAGTGTGGCAGCAAATTATGTCGTCGCTGCTTGTATACAAGGGAGTGTAATTAAGAGATTGTCTACTATCGCTAGAGTAAGCTTAGCGGCTTGTACTGCTTACATCATTAAACATGCCAATCTCTCTGGGAGACTGACCCTAAAGATAGAGTTTCAAGAACCGTTAGCTCTATTGGATCCCCTAGATGCTCTATCAAAATCCATCGCTATTCCTTTCCTCCACCGAGAAGGCGAGAAAGTTTTTCCCCACTGCCAAAAGTTTCAAATATTCCCGCTCTCTCCCCTCCCTATAAATACTCCCAACTCCCTCCTCCCATTACACAAAGCAACTCACACTCAAAAGAGAGAGAAAAAACACAATCACAAAAAGCCCAGAAAACCACCACAAAAAGCTTCAAGTTCATCAACAATGGCGAGAACTAAGCAAACAGCAAGGAAATCCACCGGAGGAAAAGCTCCAAGGAAGCAGCTCGCAACCAAAGCTGCTCGCAAATCAGCTCCGGCAACCGGCGGAGTGAAGAAGCCACACAGATTCAGGCCAGGAACCGTCGCTCTCCGTGAAATCCGCAAGTACCAGAAGAGCACTGAGCTTCTCATCAGGAAGCTTCCATTCCAGAGGCTTGTAAGAGAAATCGCTCAAGATTTCAAAACCGATCTTCGTTTCCAGAGCTCTGCTGTTGCTGCTCTTCAGGAAGCTGCTGAGGCTTACCTTGTTGGTTTGTTCGAGGATACTAATTTGTGCGCGATTCATGCTAAGAGAGTCACTATCATGCCTAAGGATATCCAGCTTGCTAGGAGGATCCGTGGAGAGCGTGCTTAG

Protein sequence

MKYRSVHIHVRVSRIRHSAERLNKLDKCVSVAANYVVAACIQGSVIKRLSTIARVSLAACTAYIIKHANLSGRLTLKIEFQEPLALLDPLDALSKSIAIPFLHREGEKVFPHCQKFQIFPLSPLPINTPNSLLPLHKATHTQKREKKHNHKKPRKPPQKASSSSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15651.1Spo15651.1mRNA


Homology
BLAST of Spo15651.1 vs. NCBI nr
Match: gi|1002258326|ref|XP_015633495.1| (PREDICTED: histone H3-like centromeric protein CSE4 [Oryza sativa Japonica Group])

HSP 1 Score: 259.2 bits (661), Expect = 8.800e-66
Identity = 153/205 (74.63%), Postives = 166/205 (80.98%), Query Frame = 1

		  

Query: 99  IPFLH--REGEKVFPHCQKFQIFPLSPLPINTPNSLLPLHKATHTQKREKKHNHKKPRKP 158
           IP +H  R  +   P   KF   P  P   NTP    P  +  H    +K H++   ++ 
Sbjct: 74  IPAVHLIRRSKPHPPKIPKFFAIPRLPPTTNTP---APPTRNPHASI-QKIHSNFAAKRS 133

Query: 159 PQKASSSSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE 218
            +++ + S+MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE
Sbjct: 134 RERSINPSSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE 193

Query: 219 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 278
           IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC
Sbjct: 194 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 253

Query: 279 AIHAKRVTIMPKDIQLARRIRGERA 302
           AIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 254 AIHAKRVTIMPKDIQLARRIRGERA 274

BLAST of Spo15651.1 vs. NCBI nr
Match: gi|937921359|dbj|BAS96276.1| (Os06g0160100, partial [Oryza sativa Japonica Group])

HSP 1 Score: 257.3 bits (656), Expect = 3.300e-65
Identity = 152/195 (77.95%), Postives = 159/195 (81.54%), Query Frame = 1

		  

Query: 115 KFQIFPLSPLPINT-PNSLLPLHK-------ATHTQKREKKHNHKKPRKPPQKASSSSTM 174
           KF+ F L     N  P+ +  L K        + T K + +  H  P  P Q   SS +M
Sbjct: 30  KFRTFSLRAYYANANPSQISRLFKHRRIPPPQSTTAKFQIQRTHSPPPPPRQALLSSFSM 89

Query: 175 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 234
           ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL
Sbjct: 90  ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 149

Query: 235 LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 294
           LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIM
Sbjct: 150 LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 209

Query: 295 PKDIQLARRIRGERA 302
           PKDIQLARRIRGERA
Sbjct: 210 PKDIQLARRIRGERA 224

BLAST of Spo15651.1 vs. NCBI nr
Match: gi|414878180|tpg|DAA55311.1| (TPA: histone H3.2 [Zea mays])

HSP 1 Score: 256.5 bits (654), Expect = 5.700e-65
Identity = 152/197 (77.16%), Postives = 159/197 (80.71%), Query Frame = 1

		  

Query: 111 PHCQKFQIFPLSPLPINTPNSLL------PLHKATHTQKREKKHNHKKPRKPPQKASSSS 170
           P   + QI P  P P  TP+ L       P  ++   +   +  N  KP +PP      S
Sbjct: 53  PPRAQHQIHP--PPPTLTPSRLPATPHRPPRSQSPTPRPNSEPQNRAKPPRPP--CPQPS 112

Query: 171 TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST 230
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST
Sbjct: 113 PMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST 172

Query: 231 ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVT 290
           ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 173 ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVT 232

Query: 291 IMPKDIQLARRIRGERA 302
           IMPKDIQLARRIRGERA
Sbjct: 233 IMPKDIQLARRIRGERA 245

BLAST of Spo15651.1 vs. NCBI nr
Match: gi|590583591|ref|XP_007014942.1| (Histone superfamily protein [Theobroma cacao])

HSP 1 Score: 256.5 bits (654), Expect = 5.700e-65
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 1

		  

Query: 161 SSSSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY 220
           SS  TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY
Sbjct: 36  SSQITMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY 95

Query: 221 QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHA 280
           QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHA
Sbjct: 96  QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHA 155

Query: 281 KRVTIMPKDIQLARRIRGERA 302
           KRVTIMPKDIQLARRIRGERA
Sbjct: 156 KRVTIMPKDIQLARRIRGERA 176

BLAST of Spo15651.1 vs. NCBI nr
Match: gi|1012347274|gb|KYP58465.1| (Histone H3.2, partial [Cajanus cajan])

HSP 1 Score: 255.4 bits (651), Expect = 1.300e-64
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 1

		  

Query: 162 SSSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 221
           S STMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ
Sbjct: 1   SISTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 60

Query: 222 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAK 281
           KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAIHAK
Sbjct: 61  KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 120

Query: 282 RVTIMPKDIQLARRIRGERA 302
           RVTIMPKDIQLARRIRGERA
Sbjct: 121 RVTIMPKDIQLARRIRGERA 140

BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A0P0WA64_ORYSJ (Os04g0419600 protein OS=Oryza sativa subsp. japonica GN=Os04g0419600 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 6.100e-66
Identity = 153/205 (74.63%), Postives = 166/205 (80.98%), Query Frame = 1

		  

Query: 99  IPFLH--REGEKVFPHCQKFQIFPLSPLPINTPNSLLPLHKATHTQKREKKHNHKKPRKP 158
           IP +H  R  +   P   KF   P  P   NTP    P  +  H    +K H++   ++ 
Sbjct: 74  IPAVHLIRRSKPHPPKIPKFFAIPRLPPTTNTP---APPTRNPHASI-QKIHSNFAAKRS 133

Query: 159 PQKASSSSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE 218
            +++ + S+MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE
Sbjct: 134 RERSINPSSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE 193

Query: 219 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 278
           IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC
Sbjct: 194 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 253

Query: 279 AIHAKRVTIMPKDIQLARRIRGERA 302
           AIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 254 AIHAKRVTIMPKDIQLARRIRGERA 274

BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A0P0WSK4_ORYSJ (Os06g0160100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0160100 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.300e-65
Identity = 152/195 (77.95%), Postives = 159/195 (81.54%), Query Frame = 1

		  

Query: 115 KFQIFPLSPLPINT-PNSLLPLHK-------ATHTQKREKKHNHKKPRKPPQKASSSSTM 174
           KF+ F L     N  P+ +  L K        + T K + +  H  P  P Q   SS +M
Sbjct: 30  KFRTFSLRAYYANANPSQISRLFKHRRIPPPQSTTAKFQIQRTHSPPPPPRQALLSSFSM 89

Query: 175 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 234
           ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL
Sbjct: 90  ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 149

Query: 235 LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 294
           LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIM
Sbjct: 150 LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 209

Query: 295 PKDIQLARRIRGERA 302
           PKDIQLARRIRGERA
Sbjct: 210 PKDIQLARRIRGERA 224

BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A061GSS0_THECC (Histone superfamily protein OS=Theobroma cacao GN=TCM_040553 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.000e-65
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 1

		  

Query: 161 SSSSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY 220
           SS  TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY
Sbjct: 36  SSQITMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY 95

Query: 221 QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHA 280
           QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHA
Sbjct: 96  QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHA 155

Query: 281 KRVTIMPKDIQLARRIRGERA 302
           KRVTIMPKDIQLARRIRGERA
Sbjct: 156 KRVTIMPKDIQLARRIRGERA 176

BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A096TZU4_MAIZE (Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.000e-65
Identity = 152/197 (77.16%), Postives = 159/197 (80.71%), Query Frame = 1

		  

Query: 111 PHCQKFQIFPLSPLPINTPNSLL------PLHKATHTQKREKKHNHKKPRKPPQKASSSS 170
           P   + QI P  P P  TP+ L       P  ++   +   +  N  KP +PP      S
Sbjct: 53  PPRAQHQIHP--PPPTLTPSRLPATPHRPPRSQSPTPRPNSEPQNRAKPPRPP--CPQPS 112

Query: 171 TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST 230
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST
Sbjct: 113 PMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST 172

Query: 231 ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVT 290
           ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 173 ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVT 232

Query: 291 IMPKDIQLARRIRGERA 302
           IMPKDIQLARRIRGERA
Sbjct: 233 IMPKDIQLARRIRGERA 245

BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A151SUI8_CAJCA (Histone H3 (Fragment) OS=Cajanus cajan GN=KK1_013873 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 8.800e-65
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 1

		  

Query: 162 SSSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 221
           S STMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ
Sbjct: 1   SISTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 60

Query: 222 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAK 281
           KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAIHAK
Sbjct: 61  KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 120

Query: 282 RVTIMPKDIQLARRIRGERA 302
           RVTIMPKDIQLARRIRGERA
Sbjct: 121 RVTIMPKDIQLARRIRGERA 140

BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_BRANA (Histone H3.2 OS=Brassica napus PE=2 SV=3)

HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_EUPES (Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3)

HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_PETCR (Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2)

HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_ORYSJ (Histone H3.2 OS=Oryza sativa subsp. japonica GN=Os01g0866200 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_TOBAC (Histone H3.2 OS=Nicotiana tabacum GN=B34 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT1G09200.1 (Histone superfamily protein)

HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT3G27360.1 (Histone superfamily protein)

HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT5G10390.1 (Histone superfamily protein)

HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT5G10400.1 (Histone superfamily protein)

HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT5G65360.1 (Histone superfamily protein)

HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

		  

Query: 166 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 225
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 226 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 285
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 286 MPKDIQLARRIRGERA 302
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:
BLAST of Spo15651.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|1002258326|ref|XP_015633495.1|8.8e-6674.6PREDICTED: histone H3-like cen... [more]
gi|937921359|dbj|BAS96276.1|3.3e-6577.9Os06g0160100, partial [Oryza s... [more]
gi|414878180|tpg|DAA55311.1|5.7e-6577.1TPA: histone H3.2 [Zea mays][more]
gi|590583591|ref|XP_007014942.1|5.7e-6598.5Histone superfamily protein [T... [more]
gi|1012347274|gb|KYP58465.1|1.3e-6498.5Histone H3.2, partial [Cajanus... [more]
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BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0P0WA64_ORYSJ6.1e-6674.6Os04g0419600 protein OS=Oryza ... [more]
A0A0P0WSK4_ORYSJ2.3e-6577.9Os06g0160100 protein (Fragment... [more]
A0A061GSS0_THECC4.0e-6598.5Histone superfamily protein OS... [more]
A0A096TZU4_MAIZE4.0e-6577.1Histone H3.2 OS=Zea mays GN=H3... [more]
A0A151SUI8_CAJCA8.8e-6598.5Histone H3 (Fragment) OS=Cajan... [more]
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BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H32_BRANA3.9e-66100.Histone H3.2 OS=Brassica napus... [more]
H32_EUPES3.9e-66100.Histone H3.2 OS=Euphorbia esul... [more]
H32_PETCR3.9e-66100.Histone H3.2 OS=Petroselinum c... [more]
H32_ORYSJ3.9e-66100.Histone H3.2 OS=Oryza sativa s... [more]
H32_TOBAC3.9e-66100.Histone H3.2 OS=Nicotiana taba... [more]
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BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G09200.12.2e-67100.Histone superfamily protein[more]
AT3G27360.12.2e-67100.Histone superfamily protein[more]
AT5G10390.12.2e-67100.Histone superfamily protein[more]
AT5G10400.12.2e-67100.Histone superfamily protein[more]
AT5G65360.12.2e-67100.Histone superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 199..220
score: 2.4E-84coord: 263..279
score: 2.4E-84coord: 279..300
score: 2.4E-84coord: 245..263
score: 2.4E-84coord: 182..196
score: 2.4E-84coord: 223..240
score: 2.4E-84coord: 168..182
score: 2.4
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 166..301
score: 1.2E
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 199..301
score: 8.4
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 180..186
scor
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 232..240
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 166..297
score: 9.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 167..299
score: 6.3
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 167..298
score: 1.32

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008283 cell proliferation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006414 translational elongation
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0001510 RNA methylation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006335 DNA replication-dependent nucleosome assembly
biological_process GO:0006412 translation
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006334 nucleosome assembly
biological_process GO:0060968 regulation of gene silencing
cellular_component GO:0005730 nucleolus
cellular_component GO:0005634 nucleus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0070062 extracellular exosome
cellular_component GO:0016020 membrane
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0009506 plasmodesma
cellular_component GO:0000228 nuclear chromosome
cellular_component GO:0000786 nucleosome
cellular_component GO:0009536 plastid
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005618 cell wall
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005515 protein binding
RNA-Seq Expression