Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTATCGAAGTGTCCATATCCATGTCCGAGTGTCGAGGATTCGACACAGGTATTTGAGGTAAAATGAAGAGTCTGGGCAACAAAGAATGTAGGTCTTGAAAGTTACTTATTTCGTAATGAAGCGTGTGCCTGCATGATATTGATGTACATGTTCTTTGTTCAGTGCTGAGAGACTAAATAAGTTAGACAAATGTGTGAGTGTGGCAGCAAATTATGTCGTCGCTGCTTGTATACAAGGGAGTGTAATTAAGAGAGTTAGTTTTCTGTGAATGTGACTGATAGAGTGATTTGGGGGGATGTAAAGAGCTGATAAAAATGATCTATTTTCTGAGGCAGTTTGGTGAAATTGATTGGCTTCTTTTGTTTTCAATTGGGTATTGGTCTGTTGTGTGTTGTACATGGAGATTGTTCAATTTATTGGTTTTTGTTTGCCATTATTAATAGTAGAGATTATTTTTGAGATGATGAATGATATTGTTCTCATTCTAGATGGTAATTGCTCATGTTTGCTCATTTGTCCATTTTCATATCAATTCTTCTTGCCTAGGCTCTTACAGTTTTGTGAGATGACACGCCAAAAAAAGTTCGGGTTTGGGCAGAAAACTTTGCGTAGTTTCATTTTTATATTTTTTTGGCGGGTTTTTGGGACTATGTTTTCAATCCCAAATAAGGAAATTTATGCTAATTTAATTTTAGTCCCAACTCGGTTTTACTCTTACATATGTTACTCAACCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCCTTTTCTATAATATATTAGGAGTTAGACACACTATATCATCTTTTCTGCAAAGTATCACTATTTTAGCGACCCTTTTTTTTGGTAAAAAACGGATGGGCTAATAGATTAAGAAATTAAAAGAGTTTGACATAGAGTTAAAAACAAAAAGAAGACAATTAGGGTACATCATAAACATAGGATTAGGGTACATATAGCGACCCTTGATTTACAGTTTTAATTCATATCTAACTTTTTCCCTCAAACAAATCATCTAACATAGCGAGATTACTCTTTTTCCGCACTTAAGCGCATAACGTGCAATTAGACTTCCCGTTTAGTTGCTGAAAGATAAAGATAAGCTAACGAGTTCATGCTTACCCCCCTTAGGGATCTAAATGATTTATAGTTGTCTACTATCGCTAGAGTAAGCTTAGCGGCTTGTACTGCTTACATCATTAAACATGCCAATCTCTCTGGGAGACTGACCCTAAAGATAGAGTTTCAAGAACCGTTAGCTCTATTGGATCCCCTAGATGCTCTATCAAAATCCATCGCTATTCCTTTCCTCCACCGAGAAGGCGAGAAAGGTGAGTTGAGCTTTTCCACCTAGTCAAAGCCAACCAGCTGCTGGCCTGCTGCACCAGTCAGGCCAGAGAACAGATAGGGGTCAATTTCTCATACTTTGTACTTAACTAGACTAGAAGTGTTTACATGTATTTTTTCACAAATTCTTATTTACAATGGGTGTACAATATTTATTGTACACCGAAGTAAAAGTTAACACAAAATGCTTAAAAGTTAAGCTTATATATGTAAAAGTTATCTATTTTTAAGTAATAAATTTTTTCATTTTAGTAAAACTTATTTCTTCAATAATGTATAAAATCAATCATTTAACCTTTCAAAATATTTATCTATTAATTCTTTTTACTAATATAAAAGTTAATCAAAATTAGGTTAAAGTTATAAAAAAAAAAGGTTAAAGTTATCTTGGTGTACAATAAATTTATTGTACACCTTGTGCGCGCAAGACCTATTGGTATTTTTTTGACGAAGGCCCGGAATGCCAAAACACCTTTTGTTATTCAAATATCTACATCTATATCGAAATTTCACGAGAACAAAGTTATTGTGTACTACACAATAACGAACTTAATTAAAAGCTCAAACACGACCACATTTGTTAATGTGGCAATACAAACTATAAATAAAGGGACCACAAACATGTAATATATCGTATATAAACCATCGGTCTAAATTACTAGCCTAAAAGGCTAAAACATCACAAGCTTTGTTAGTGTTATTGTCATATGAACATAGACCCATTGATGAATAATGGTCATAGACCCATTGATGAATAATTGTCATATGTTAGTGTTGTCATATGAATAATGGTCATTGACCCATTGACCCATTGACCCATAAACTACAATCTTACCAATACAATGATACAATGTCTAATAGCCAGTCGGCCCAATAGGCTTTTAACAACAGAAAAAGAAAAGACACGTGGTCAAATATCATTGGTTGAAGGACGAAAACACGGATCGCTGTCTAAACCACTCTACAAAACAATCTCCCAACCGTCGATTAATATAATCTTTAATCCAACGCCTTAAATTCATTTCCCCAAAAAATCTCTTTTTCAGTTTTTCCCCACTGCCAAAAGTTTCAAATATTCCCGCTCTCTCCCCTCCCTATAAATACTCCCAACTCCCTCCTCCCATTACACAAAGCAACTCACACTCAAAAGAGAGAGAAAAAACACAATCACAAAAAGCCCAGAAAACCACCACAAAAAGCTTCAAGTTCATCAACAATGGCGAGAACTAAGCAAACAGCAAGGAAATCCACCGGAGGAAAAGCTCCAAGGAAGCAGCTCGCAACCAAAGCTGCTCGCAAATCAGCTCCGGCAACCGGCGGAGTGAAGAAGCCACACAGATTCAGGCCAGGAACCGTCGCTCTCCGTGAAATCCGCAAGTACCAGAAGAGCACTGAGCTTCTCATCAGGAAGCTTCCATTCCAGAGGCTTGTAAGAGAAATCGCTCAAGATTTCAAAACCGATCTTCGTTTCCAGAGCTCTGCTGTTGCTGCTCTTCAGGAAGCTGCTGAGGCTTACCTTGTTGGTTTGTTCGAGGATACTAATTTGTGCGCGATTCATGCTAAGAGAGTCACTATCATGCCTAAGGATATCCAGCTTGCTAGGAGGATCCGTGGAGAGCGTGCTTAG ATGAAGTATCGAAGTGTCCATATCCATGTCCGAGTGTCGAGGATTCGACACAGTGCTGAGAGACTAAATAAGTTAGACAAATGTGTGAGTGTGGCAGCAAATTATGTCGTCGCTGCTTGTATACAAGGGAGTGTAATTAAGAGATTGTCTACTATCGCTAGAGTAAGCTTAGCGGCTTGTACTGCTTACATCATTAAACATGCCAATCTCTCTGGGAGACTGACCCTAAAGATAGAGTTTCAAGAACCGTTAGCTCTATTGGATCCCCTAGATGCTCTATCAAAATCCATCGCTATTCCTTTCCTCCACCGAGAAGGCGAGAAAGTTTTTCCCCACTGCCAAAAGTTTCAAATATTCCCGCTCTCTCCCCTCCCTATAAATACTCCCAACTCCCTCCTCCCATTACACAAAGCAACTCACACTCAAAAGAGAGAGAAAAAACACAATCACAAAAAGCCCAGAAAACCACCACAAAAAGCTTCAAGTTCATCAACAATGGCGAGAACTAAGCAAACAGCAAGGAAATCCACCGGAGGAAAAGCTCCAAGGAAGCAGCTCGCAACCAAAGCTGCTCGCAAATCAGCTCCGGCAACCGGCGGAGTGAAGAAGCCACACAGATTCAGGCCAGGAACCGTCGCTCTCCGTGAAATCCGCAAGTACCAGAAGAGCACTGAGCTTCTCATCAGGAAGCTTCCATTCCAGAGGCTTGTAAGAGAAATCGCTCAAGATTTCAAAACCGATCTTCGTTTCCAGAGCTCTGCTGTTGCTGCTCTTCAGGAAGCTGCTGAGGCTTACCTTGTTGGTTTGTTCGAGGATACTAATTTGTGCGCGATTCATGCTAAGAGAGTCACTATCATGCCTAAGGATATCCAGCTTGCTAGGAGGATCCGTGGAGAGCGTGCTTAG ATGAAGTATCGAAGTGTCCATATCCATGTCCGAGTGTCGAGGATTCGACACAGTGCTGAGAGACTAAATAAGTTAGACAAATGTGTGAGTGTGGCAGCAAATTATGTCGTCGCTGCTTGTATACAAGGGAGTGTAATTAAGAGATTGTCTACTATCGCTAGAGTAAGCTTAGCGGCTTGTACTGCTTACATCATTAAACATGCCAATCTCTCTGGGAGACTGACCCTAAAGATAGAGTTTCAAGAACCGTTAGCTCTATTGGATCCCCTAGATGCTCTATCAAAATCCATCGCTATTCCTTTCCTCCACCGAGAAGGCGAGAAAGTTTTTCCCCACTGCCAAAAGTTTCAAATATTCCCGCTCTCTCCCCTCCCTATAAATACTCCCAACTCCCTCCTCCCATTACACAAAGCAACTCACACTCAAAAGAGAGAGAAAAAACACAATCACAAAAAGCCCAGAAAACCACCACAAAAAGCTTCAAGTTCATCAACAATGGCGAGAACTAAGCAAACAGCAAGGAAATCCACCGGAGGAAAAGCTCCAAGGAAGCAGCTCGCAACCAAAGCTGCTCGCAAATCAGCTCCGGCAACCGGCGGAGTGAAGAAGCCACACAGATTCAGGCCAGGAACCGTCGCTCTCCGTGAAATCCGCAAGTACCAGAAGAGCACTGAGCTTCTCATCAGGAAGCTTCCATTCCAGAGGCTTGTAAGAGAAATCGCTCAAGATTTCAAAACCGATCTTCGTTTCCAGAGCTCTGCTGTTGCTGCTCTTCAGGAAGCTGCTGAGGCTTACCTTGTTGGTTTGTTCGAGGATACTAATTTGTGCGCGATTCATGCTAAGAGAGTCACTATCATGCCTAAGGATATCCAGCTTGCTAGGAGGATCCGTGGAGAGCGTGCTTAG MKYRSVHIHVRVSRIRHSAERLNKLDKCVSVAANYVVAACIQGSVIKRLSTIARVSLAACTAYIIKHANLSGRLTLKIEFQEPLALLDPLDALSKSIAIPFLHREGEKVFPHCQKFQIFPLSPLPINTPNSLLPLHKATHTQKREKKHNHKKPRKPPQKASSSSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15651.1 vs. NCBI nr
Match: gi|1002258326|ref|XP_015633495.1| (PREDICTED: histone H3-like centromeric protein CSE4 [Oryza sativa Japonica Group]) HSP 1 Score: 259.2 bits (661), Expect = 8.800e-66 Identity = 153/205 (74.63%), Postives = 166/205 (80.98%), Query Frame = 1
BLAST of Spo15651.1 vs. NCBI nr
Match: gi|937921359|dbj|BAS96276.1| (Os06g0160100, partial [Oryza sativa Japonica Group]) HSP 1 Score: 257.3 bits (656), Expect = 3.300e-65 Identity = 152/195 (77.95%), Postives = 159/195 (81.54%), Query Frame = 1
BLAST of Spo15651.1 vs. NCBI nr
Match: gi|414878180|tpg|DAA55311.1| (TPA: histone H3.2 [Zea mays]) HSP 1 Score: 256.5 bits (654), Expect = 5.700e-65 Identity = 152/197 (77.16%), Postives = 159/197 (80.71%), Query Frame = 1
BLAST of Spo15651.1 vs. NCBI nr
Match: gi|590583591|ref|XP_007014942.1| (Histone superfamily protein [Theobroma cacao]) HSP 1 Score: 256.5 bits (654), Expect = 5.700e-65 Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 1
BLAST of Spo15651.1 vs. NCBI nr
Match: gi|1012347274|gb|KYP58465.1| (Histone H3.2, partial [Cajanus cajan]) HSP 1 Score: 255.4 bits (651), Expect = 1.300e-64 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 1
BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A0P0WA64_ORYSJ (Os04g0419600 protein OS=Oryza sativa subsp. japonica GN=Os04g0419600 PE=3 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 6.100e-66 Identity = 153/205 (74.63%), Postives = 166/205 (80.98%), Query Frame = 1
BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A0P0WSK4_ORYSJ (Os06g0160100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0160100 PE=3 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 2.300e-65 Identity = 152/195 (77.95%), Postives = 159/195 (81.54%), Query Frame = 1
BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A061GSS0_THECC (Histone superfamily protein OS=Theobroma cacao GN=TCM_040553 PE=3 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 4.000e-65 Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 1
BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A096TZU4_MAIZE (Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 4.000e-65 Identity = 152/197 (77.16%), Postives = 159/197 (80.71%), Query Frame = 1
BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Match: A0A151SUI8_CAJCA (Histone H3 (Fragment) OS=Cajanus cajan GN=KK1_013873 PE=3 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 8.800e-65 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 1
BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_BRANA (Histone H3.2 OS=Brassica napus PE=2 SV=3) HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_EUPES (Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3) HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_PETCR (Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2) HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_ORYSJ (Histone H3.2 OS=Oryza sativa subsp. japonica GN=Os01g0866200 PE=3 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Match: H32_TOBAC (Histone H3.2 OS=Nicotiana tabacum GN=B34 PE=1 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.900e-66 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT1G09200.1 (Histone superfamily protein) HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT3G27360.1 (Histone superfamily protein) HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT5G10390.1 (Histone superfamily protein) HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT5G10400.1 (Histone superfamily protein) HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Match: AT5G65360.1 (Histone superfamily protein) HSP 1 Score: 253.1 bits (645), Expect = 2.200e-67 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15651.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15651.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15651.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo15651.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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