Spo15758 (gene) | SpinachBase

Overview


Name	Spo15758
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Zinc finger (Ran-binding) family protein
Location	SpoScf_00652 : 224591 .. 226365 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTGCACATTATACTTCAGGTCCCACCAAAAAAGAATTCCCTCAACTACTATAAAAAGGATCACCACTTAACGGACCAAACACCCACCAACTACTTCTAAGTTCTAACACTTCTCTAGCTATCAACACTCATAAGCCACTGATTTCAGTCATTTCCTTTTTCTAAAGCTCCATATTTCTCAGGTTAGTTCCCCGAGCTTGAACTGTCCCGTAAAAGCAATGCTCTAGCTTATTACATCATTCAGCCTATGAGCTAAAGTGATATAGTTTATAGGGAGCCGCACTCATAAAAAAGATGTACAAAAATGGAAAAAAATAAAAATCACGATCTTTAATCAACTAATGCAAATATAGAAAATGCTATTGACTTTCAATGTTTTTAACTCCTTTTTTCCTTGTTGGTTTTAACTCCAGATAAAGGCAAGAATGAGTTCTCCAGGGGATTGGTTATGTGGTGCATGCCAACATGTGAACTTCAAGAAGCGGGAATCATGCCAGAAGTGTAGCTTTCCCAAGTATGGTAGCCAGGATGATATCCCCTATTACATTGCTAACACAAAGGGTAGCAGGACAGAGGTGTTGGCCGGAGACTGGTACTGCCAGAGCATGAATTGCGGGGCCCACAATTACGCTAGCCGTACAAGTTGTTTCCGTTGTGGAAACCTTAAATGTGATTATGGGACCGTTGGTATTGGTTACGGAACTGGTGACATGATGATGGGAGCTGGGGGTTATAGCTCAGAACAGCAACAACAACAACTCATGCCGGGGTGGAAAGCTGGTGACTGGGTTTGCGTGAGGTAACATAATATAGTTCTTCACTGTCAAAGAATTTTAGCCTTGTTTTTCAGGCTGCAATAGTTGTTTGATGACTGAAATTGTCATCTTTGCTACTGCAGACCTGGATGTGGTTTACACAATTATGCATGCAGGATGGAATGCTACAAGTGCAGATTGCCAAGGGATTTTGGTAATATTTCTTTTTCCTCTAGCTAAAGTGTATTTGTCCCATTGTTAAGAAAAAACATCTTATGATTTTTTGTTTTTATTGGACAGGCGGAGCAATGTAAGAGGAGAAGGGATTTTACACAGGTTCCACAATCTCATTTGGTTTCTGATGTAACTTTCATGATTTGAGCACCTATTAGTAGCTAGGGAGCTAAATAGAAACTCCCTACTACTTTCAAGTGTAATTTTAGTCATTGTAAGGTGCTATGGAGGGGTCAAGTAAAGCCCAAAAGGCTAATTTTTCTGGGTTACAAGGAAAAATCCATGTTTCATAAGTGTTACTCTCTTGATTTTTGGTTGTTTTAAGCTGGTTAAGAACTCTCACTTAAATATAACCTAGATTCAAGGAATCACTGAAGTCTAATTCAGTTCTAGGGACATGCTTATTTTTCTAATTTGTTTCCCTTTCGAAGGAGCAATTATTAATGAGTCCTTTTTGGCATAAAATCTTTAAGAGTAACAGCATGCAGATAAGAACCTGATGCTCCGCTTTAGAGCATGGGTTCGACAAAAGGTCCAATCCTCTCTCCGTCATTAATCTTCTGGCTTCCCATACGCTAAGTTTGATGGATTTAGCATATCCTAACTTTATACTCCGTACCAAATACAGATCAAAACAACTAATGAAGATTTATCTTCTAGTATTATTTGTTTGGATCAGTGTCTTTGGTGTATCATATCACATGTAAGATATGTAAAACTCAGAGAACAGGGCAAGAAGCCCCAAAAAGTAAAATACTATTGCCTACCCAAAATAATTTTAT

mRNA sequence

ATGATGTGCACATTATACTTCAGTCATTTCCTTTTTCTAAAGCTCCATATTTCTCAGATAAAGGCAAGAATGAGTTCTCCAGGGGATTGGTTATGTGGTGCATGCCAACATGTGAACTTCAAGAAGCGGGAATCATGCCAGAAGTGTAGCTTTCCCAAGTATGGTAGCCAGGATGATATCCCCTATTACATTGCTAACACAAAGGGTAGCAGGACAGAGGTGTTGGCCGGAGACTGGTACTGCCAGAGCATGAATTGCGGGGCCCACAATTACGCTAGCCGTACAAGTTGTTTCCGTTGTGGAAACCTTAAATGTGATTATGGGACCGTTGGTATTGGTTACGGAACTGGTGACATGATGATGGGAGCTGGGGGTTATAGCTCAGAACAGCAACAACAACAACTCATGCCGGGGTGGAAAGCTGGTGACTGGGTTTGCGTGAGACCTGGATGTGGTTTACACAATTATGCATGCAGGATGGAATGCTACAAGTGCAGATTGCCAAGGGATTTTGGCGGAGCAATGTAAGAGGAGAAGGGATTTTACACAGGTTCCACAATCTCATTTGGTTTCTGATGTAACTTTCATGATTTGAGCACCTATTAGTAGCTAGGGAGCTAAATAGAAACTCCCTACTACTTTCAAGTGTAATTTTAGTCATTGTAAGGTGCTATGGAGGGGTCAAGTAAAGCCCAAAAGGCTAATTTTTCTGGGTTACAAGGAAAAATCCATGTTTCATAAGTGTTACTCTCTTGATTTTTGGTTGTTTTAAGCTGGTTAAGAACTCTCACTTAAATATAACCTAGATTCAAGGAATCACTGAAGTCTAATTCAGTTCTAGGGACATGCTTATTTTTCTAATTTGTTTCCCTTTCGAAGGAGCAATTATTAATGAGTCCTTTTTGGCATAAAATCTTTAAGAGTAACAGCATGCAGATAAGAACCTGATGCTCCGCTTTAGAGCATGGGTTCGACAAAAGGTCCAATCCTCTCTCCGTCATTAATCTTCTGGCTTCCCATACGCTAAGTTTGATGGATTTAGCATATCCTAACTTTATACTCCGTACCAAATACAGATCAAAACAACTAATGAAGATTTATCTTCTAGTATTATTTGTTTGGATCAGTGTCTTTGGTGTATCATATCACATGTAAGATATGTAAAACTCAGAGAACAGGGCAAGAAGCCCCAAAAAGTAAAATACTATTGCCTACCCAAAATAATTTTAT

Coding sequence (CDS)

ATGATGTGCACATTATACTTCAGTCATTTCCTTTTTCTAAAGCTCCATATTTCTCAGATAAAGGCAAGAATGAGTTCTCCAGGGGATTGGTTATGTGGTGCATGCCAACATGTGAACTTCAAGAAGCGGGAATCATGCCAGAAGTGTAGCTTTCCCAAGTATGGTAGCCAGGATGATATCCCCTATTACATTGCTAACACAAAGGGTAGCAGGACAGAGGTGTTGGCCGGAGACTGGTACTGCCAGAGCATGAATTGCGGGGCCCACAATTACGCTAGCCGTACAAGTTGTTTCCGTTGTGGAAACCTTAAATGTGATTATGGGACCGTTGGTATTGGTTACGGAACTGGTGACATGATGATGGGAGCTGGGGGTTATAGCTCAGAACAGCAACAACAACAACTCATGCCGGGGTGGAAAGCTGGTGACTGGGTTTGCGTGAGACCTGGATGTGGTTTACACAATTATGCATGCAGGATGGAATGCTACAAGTGCAGATTGCCAAGGGATTTTGGCGGAGCAATGTAA

Protein sequence

MMCTLYFSHFLFLKLHISQIKARMSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQSMNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGDWVCVRPGCGLHNYACRMECYKCRLPRDFGGAM

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo15758.1	Spo15758.1	mRNA

Homology

[Close]

BLAST of Spo15758.1 vs. NCBI nr
Match: gi|902207964|gb|KNA15813.1| (hypothetical protein SOVF_094790 [Spinacia oleracea])

HSP 1 Score: 347.1 bits (889), Expect = 1.900e-92
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 83
           MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS
Sbjct: 1   MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 60

Query: 84  MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD 143
           MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD
Sbjct: 61  MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD 120

Query: 144 WVCVRPGCGLHNYACRMECYKCRLPRDFGGAM 176
           WVCVRPGCGLHNYACRMECYKCRLPRDFGGAM
Sbjct: 121 WVCVRPGCGLHNYACRMECYKCRLPRDFGGAM 152

[Close]

BLAST of Spo15758.1 vs. NCBI nr
Match: gi|731353405|ref|XP_010688049.1| (PREDICTED: uncharacterized protein LOC104902081 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 336.3 bits (861), Expect = 3.300e-89
Identity = 151/184 (82.07%), Postives = 160/184 (86.96%), Query Frame = 1


		  
Query: 4   TLYFSHF------------LFLKLHISQIKARMSSPGDWLCGACQHVNFKKRESCQKCSF 63
           T YF HF            LFLKL  SQIK  MSSPGDWLCGACQHVNFKKRESCQKCSF
Sbjct: 31  TNYFIHFSSYLHSEATSFSLFLKLQFSQIKKTMSSPGDWLCGACQHVNFKKRESCQKCSF 90

Query: 64  PKYGSQDDIPYYIANTKGSRTEVLAGDWYCQSMNCGAHNYASRTSCFRCGNLKCDYGTVG 123
           PKYGS+ DIPYYIANTK  RTEVLAGDWYCQSMNCGAHNYASRT+CFRCGN KCDYGTVG
Sbjct: 91  PKYGSEADIPYYIANTKAGRTEVLAGDWYCQSMNCGAHNYASRTNCFRCGNFKCDYGTVG 150

Query: 124 IGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGDWVCVRPGCGLHNYACRMECYKCRLPRDF 176
           +GYGT +MMMGAGGYSS+ QQQQL+PGWKAGDW+CVRPGCGLHNYACRMECYKCRLP+D+
Sbjct: 151 VGYGTNEMMMGAGGYSSD-QQQQLLPGWKAGDWICVRPGCGLHNYACRMECYKCRLPKDY 210

[Close]

BLAST of Spo15758.1 vs. NCBI nr
Match: gi|870850852|gb|KMT02918.1| (hypothetical protein BVRB_8g194940 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 320.9 bits (821), Expect = 1.400e-84
Identity = 137/152 (90.13%), Postives = 146/152 (96.05%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 83
           MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGS+ DIPYYIANTK  RTEVLAGDWYCQS
Sbjct: 1   MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSEADIPYYIANTKAGRTEVLAGDWYCQS 60

Query: 84  MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD 143
           MNCGAHNYASRT+CFRCGN KCDYGTVG+GYGT +MMMGAGGYSS+ QQQQL+PGWKAGD
Sbjct: 61  MNCGAHNYASRTNCFRCGNFKCDYGTVGVGYGTNEMMMGAGGYSSD-QQQQLLPGWKAGD 120

Query: 144 WVCVRPGCGLHNYACRMECYKCRLPRDFGGAM 176
           W+CVRPGCGLHNYACRMECYKCRLP+D+GGAM
Sbjct: 121 WICVRPGCGLHNYACRMECYKCRLPKDYGGAM 151

[Close]

BLAST of Spo15758.1 vs. NCBI nr
Match: gi|731353399|ref|XP_010688046.1| (PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 214.9 bits (546), Expect = 1.100e-52
Identity = 93/150 (62.00%), Postives = 112/150 (74.67%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 83
           MS  GDW+CGACQH+NFKKRE+CQ+C F KYG Q +   Y  N   +RTEVLAGDWYCQ+
Sbjct: 1   MSWAGDWMCGACQHINFKKREACQRCGFSKYGGQVEASAYGYNNNTNRTEVLAGDWYCQA 60

Query: 84  MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD 143
           MNCGAHNYASRTSCFRCG  K +   +G   G  +++  +GGY SE +    +PGWK GD
Sbjct: 61  MNCGAHNYASRTSCFRCGAQKPE-SALGC-CGATNVISSSGGYGSETEAN--LPGWKTGD 120

Query: 144 WVCVRPGCGLHNYACRMECYKCRLPRDFGG 174
           W+C RPGC +HNYACRMEC+KC+ PRD GG
Sbjct: 121 WICTRPGCAVHNYACRMECFKCKTPRDLGG 146

[Close]

BLAST of Spo15758.1 vs. NCBI nr
Match: gi|902207963|gb|KNA15812.1| (hypothetical protein SOVF_094780 [Spinacia oleracea])

HSP 1 Score: 208.0 bits (528), Expect = 1.300e-50
Identity = 90/152 (59.21%), Postives = 104/152 (68.42%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 83
           MS  GDW+CG CQH+NFKKRE CQ C  PKYG ++D   Y  NT  +RTEVLAGDWYCQ 
Sbjct: 1   MSWGGDWMCGGCQHINFKKREMCQCCGLPKYGGKNDASAYENNTNTNRTEVLAGDWYCQD 60

Query: 84  MNCGAHNYASRTSCFRCGNLK--CDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKA 143
           +NCG HNYASRTSCFRCG  K  C  G      G   +     GY+ E       PGWK 
Sbjct: 61  INCGTHNYASRTSCFRCGIQKSMCSLGCC----GASSVTSSGAGYTYEANP----PGWKT 120

Query: 144 GDWVCVRPGCGLHNYACRMECYKCRLPRDFGG 174
           GDW+C RPGCG+HNYACRMEC++C+ PRD+GG
Sbjct: 121 GDWICTRPGCGVHNYACRMECFRCKTPRDYGG 144

[Close]

BLAST of Spo15758.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8D7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_094790 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.300e-92
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 83
           MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS
Sbjct: 1   MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 60

Query: 84  MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD 143
           MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD
Sbjct: 61  MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD 120

Query: 144 WVCVRPGCGLHNYACRMECYKCRLPRDFGGAM 176
           WVCVRPGCGLHNYACRMECYKCRLPRDFGGAM
Sbjct: 121 WVCVRPGCGLHNYACRMECYKCRLPRDFGGAM 152

[Close]

BLAST of Spo15758.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BSP1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194940 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 9.900e-85
Identity = 137/152 (90.13%), Postives = 146/152 (96.05%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 83
           MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGS+ DIPYYIANTK  RTEVLAGDWYCQS
Sbjct: 1   MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSEADIPYYIANTKAGRTEVLAGDWYCQS 60

Query: 84  MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD 143
           MNCGAHNYASRT+CFRCGN KCDYGTVG+GYGT +MMMGAGGYSS+ QQQQL+PGWKAGD
Sbjct: 61  MNCGAHNYASRTNCFRCGNFKCDYGTVGVGYGTNEMMMGAGGYSSD-QQQQLLPGWKAGD 120

Query: 144 WVCVRPGCGLHNYACRMECYKCRLPRDFGGAM 176
           W+CVRPGCGLHNYACRMECYKCRLP+D+GGAM
Sbjct: 121 WICVRPGCGLHNYACRMECYKCRLPKDYGGAM 151

[Close]

BLAST of Spo15758.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EIU1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194970 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.700e-53
Identity = 93/150 (62.00%), Postives = 112/150 (74.67%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 83
           MS  GDW+CGACQH+NFKKRE+CQ+C F KYG Q +   Y  N   +RTEVLAGDWYCQ+
Sbjct: 1   MSWAGDWMCGACQHINFKKREACQRCGFSKYGGQVEASAYGYNNNTNRTEVLAGDWYCQA 60

Query: 84  MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD 143
           MNCGAHNYASRTSCFRCG  K +   +G   G  +++  +GGY SE +    +PGWK GD
Sbjct: 61  MNCGAHNYASRTSCFRCGAQKPE-SALGC-CGATNVISSSGGYGSETEAN--LPGWKTGD 120

Query: 144 WVCVRPGCGLHNYACRMECYKCRLPRDFGG 174
           W+C RPGC +HNYACRMEC+KC+ PRD GG
Sbjct: 121 WICTRPGCAVHNYACRMECFKCKTPRDLGG 146

[Close]

BLAST of Spo15758.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAL6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_094780 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.400e-51
Identity = 90/152 (59.21%), Postives = 104/152 (68.42%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 83
           MS  GDW+CG CQH+NFKKRE CQ C  PKYG ++D   Y  NT  +RTEVLAGDWYCQ 
Sbjct: 1   MSWGGDWMCGGCQHINFKKREMCQCCGLPKYGGKNDASAYENNTNTNRTEVLAGDWYCQD 60

Query: 84  MNCGAHNYASRTSCFRCGNLK--CDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKA 143
           +NCG HNYASRTSCFRCG  K  C  G      G   +     GY+ E       PGWK 
Sbjct: 61  INCGTHNYASRTSCFRCGIQKSMCSLGCC----GASSVTSSGAGYTYEANP----PGWKT 120

Query: 144 GDWVCVRPGCGLHNYACRMECYKCRLPRDFGG 174
           GDW+C RPGCG+HNYACRMEC++C+ PRD+GG
Sbjct: 121 GDWICTRPGCGVHNYACRMECFRCKTPRDYGG 144

[Close]

BLAST of Spo15758.1 vs. UniProtKB/TrEMBL
Match: M1BUN6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401020664 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.100e-50
Identity = 91/152 (59.87%), Postives = 106/152 (69.74%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQS 83
           MS  GDW+C ACQH+NFKKR++CQ+CS PKY +  D+  Y  N    +TEVLAGDWYC  
Sbjct: 1   MSRDGDWMCAACQHLNFKKRDACQRCSCPKYATPSDVAMYGLN----KTEVLAGDWYCSG 60

Query: 84  MNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGD 143
           MNCG+HNYASRTSC+RCG LK DY      YG G  MM   GY  +      +PGWK+GD
Sbjct: 61  MNCGSHNYASRTSCYRCGALKSDY------YGIGAGMMATTGYGYD---SSALPGWKSGD 120

Query: 144 WVCVRPGCGLHNYACRMECYKCRLPRDFGGAM 176
           W+C R GCG HNYA R ECYKC+ PRDFGG M
Sbjct: 121 WICSRLGCGTHNYASRAECYKCKTPRDFGGDM 139

[Close]

BLAST of Spo15758.1 vs. TAIR (Arabidopsis)
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 185.7 bits (470), Expect = 2.500e-47
Identity = 84/146 (57.53%), Postives = 101/146 (69.18%), Query Frame = 1


		  
Query: 28  GDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQSMNCG 87
           GDWLCGACQH NFKKRESCQKC +PK+G   D+  Y+ N    RTEV+AGDWYC ++NCG
Sbjct: 6   GDWLCGACQHANFKKRESCQKCGYPKFGGV-DVSTYLYN----RTEVMAGDWYCGALNCG 65

Query: 88  AHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGDWVCV 147
           +HNYASRTSC+RCG +K +Y      YG   +  G  G +         PGWK GDWVC 
Sbjct: 66  SHNYASRTSCYRCGMIKVEY--TEQYYGAQMVAYGNDGAACP-------PGWKTGDWVCP 125

Query: 148 RPGCGLHNYACRMECYKCRLPRDFGG 174
           R GCG+HNYA R EC+KC+  RD+GG
Sbjct: 126 RVGCGVHNYASRAECFKCKTTRDYGG 137

[Close]

BLAST of Spo15758.1 vs. TAIR (Arabidopsis)
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 4.200e-34
Identity = 70/168 (41.67%), Postives = 90/168 (53.57%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKG---------SRTEV 83
           MS PGDW C +C H+NF++R+SCQ+C   + G          N  G         + ++V
Sbjct: 1   MSRPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDV 60

Query: 84  LAGDWYCQSMNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMM-----------GA 143
             GDWYC   NCG HN+ASR++CF+CG  K + G  G G G G   M           G 
Sbjct: 61  RPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGN 120

Query: 144 GGYSSEQQQQQLMPGWKAGDWVCVRPGCGLHNYACRMECYKCRLPRDF 172
           GG SS          WK+GDW+C R GC  HN+A RMEC++C  PRDF
Sbjct: 121 GGRSS----------WKSGDWICTRIGCNEHNFASRMECFRCNAPRDF 158

[Close]

BLAST of Spo15758.1 vs. TAIR (Arabidopsis)
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 1.500e-31
Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = 1


		  
Query: 24  MSSPGDWLCGACQHVNFKKRESCQKCSFPKYG--SQDDIPYY----IANTKGSRT--EVL 83
           M+ PGDW C  C H+NF++R+SCQ+C  P+ G  S D +  +    ++++ G  T  +V 
Sbjct: 1   MNRPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVR 60

Query: 84  AGDWYCQSMNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTGDM---------MMGAGGY 143
            GDWYC   +CG HN+A+R+SCF+CG  K ++        TG M         + G GG 
Sbjct: 61  PGDWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGS 120

Query: 144 SSEQQQQQLMPGWKAGDWVCVRPGCGLHNYACRMECYKCRLPRD 171
           SS        P WK+GDW+C R GC  HN+A R EC++C  P++
Sbjct: 121 SSGGGGTGRSP-WKSGDWICPRSGCNEHNFASRSECFRCNAPKE 163

[Close]

BLAST of Spo15758.1 vs. TAIR (Arabidopsis)
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.200e-12
Identity = 55/218 (25.23%), Postives = 74/218 (33.94%), Query Frame = 1


		  
Query: 28  GDWLCGACQHVNFKKRESCQKC------------SFPKYGSQDDIPYYI----------- 87
           GDW+C  C + N+  RE C+KC            + P    Q  + Y+            
Sbjct: 50  GDWICTGCTNNNYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGS 109

Query: 88  -------ANTKGSRTEVLAGDWYCQSMNCGAHNYASRTSCFRCGNLKCDYGTVGIGYGTG 147
                   N      E  +GDW C    CG HNY+SR  C +C  +        +  GT 
Sbjct: 110 LLAFSNATNQASVHKEWRSGDWIC---RCGFHNYSSRIQCKKCNEI------APLALGTK 169

Query: 148 DMMMGA-----------GGYSSEQQQQQL---MPG------------------------- 171
            +   A            GY+S Q Q  +    PG                         
Sbjct: 170 RLASEALAHEWDSKRLNQGYTSMQTQSAIYASFPGMSLGRVSNWQLPLPFLQQHSTPALL 229

[Close]

BLAST of Spo15758.1 vs. TAIR (Arabidopsis)
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein)

HSP 1 Score: 55.1 bits (131), Expect = 5.100e-8
Identity = 35/141 (24.82%), Postives = 50/141 (35.46%), Query Frame = 1


		  
Query: 29  DWLCGACQHVNFKKRESCQKCSFPKYGSQDDIPYYIANTKGSRTEVLAGDWYCQSMNCGA 88
           DW C  C  VNF + E C++C+             +A+ +     V  GDW C    C  
Sbjct: 302 DWACPKCDFVNFARNERCRECN------------EVADRRPVAAVVKEGDWLCP--ECSF 361

Query: 89  HNYASRTSCFRCGNLKCDYGTVGIGYGTGDMMMGAGGYSSEQQQQQLMPGWKAGDWVCVR 148
            N+    SC +C                            ++     +   K GDW C  
Sbjct: 362 LNFTRNQSCLKC-----------------------KAKGPKKTSMVNIVEMKKGDWNCT- 403

Query: 149 PGCGLHNYACRMECYKCRLPR 170
            GCG  N+A   +C +CR  R
Sbjct: 422 -GCGYMNFASNKQCRECREQR 403

The following BLAST results are available for this feature:

BLAST of Spo15758.1 vs. NCBI nr
BLAST of Spo15758.1 vs. UniProtKB/TrEMBL
BLAST of Spo15758.1 vs. ExPASy Swiss-Prot
BLAST of Spo15758.1 vs. TAIR (Arabidopsis)

BLAST of Spo15758.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902207964\|gb\|KNA15813.1\|	1.9e-92	100.	hypothetical protein SOVF_0947...	[more]
gi\|731353405\|ref\|XP_010688049.1\|	3.3e-89	82.0	PREDICTED: uncharacterized pro...	[more]
gi\|870850852\|gb\|KMT02918.1\|	1.4e-84	90.1	hypothetical protein BVRB_8g19...	[more]
gi\|731353399\|ref\|XP_010688046.1\|	1.1e-52	62.0	PREDICTED: zinc finger Ran-bin...	[more]
gi\|902207963\|gb\|KNA15812.1\|	1.3e-50	59.2	hypothetical protein SOVF_0947...	[more]

BLAST of Spo15758.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R8D7_SPIOL	1.3e-92	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BSP1_BETVU	9.9e-85	90.1	Uncharacterized protein OS=Bet...	[more]
A0A0J8EIU1_BETVU	7.7e-53	62.0	Uncharacterized protein OS=Bet...	[more]
A0A0K9RAL6_SPIOL	9.4e-51	59.2	Uncharacterized protein OS=Spi...	[more]
M1BUN6_SOLTU	2.1e-50	59.8	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo15758.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo15758.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G26695.1	2.5e-47	57.5	Ran BP2/NZF zinc finger-like s...	[more]
AT3G15680.1	4.2e-34	41.6	Ran BP2/NZF zinc finger-like s...	[more]
AT5G25490.1	1.5e-31	39.6	Ran BP2/NZF zinc finger-like s...	[more]
AT2G17975.1	1.2e-12	25.2	zinc finger (Ran-binding) fami...	[more]
AT1G48570.1	5.1e-8	24.8	zinc finger (Ran-binding) fami...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	GENE3D	4.10.1060.10		coord: 25..53 score: 3.1E-12coord: 68..104 score: 3.4E-13coord: 138..170 score: 4.6
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 140..165 score: 6.1E-5coord: 27..54 score: 0.0022coord: 76..104 score: 5.
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 77..103 score: 2.3E-5coord: 28..52 score: 9.0E-7coord: 142..168 score: 0
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 79..100 score: -coord: 144..165 score: -coord: 30..49 scor
IPR001876	Zinc finger, RanBP2-type	PROFILE	PS50199	ZF_RANBP2_2	coord: 75..106 score: 9.224coord: 26..55 score: 8.795coord: 140..171 score: 9
IPR001876	Zinc finger, RanBP2-type	unknown	SSF90209	Ran binding protein zinc finger-like	coord: 68..105 score: 1.33E-9coord: 138..171 score: 2.12E-9coord: 24..56 score: 8.0
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 17..175 score: 6.4
None	No IPR available	PANTHER	PTHR23111:SF41	SUBFAMILY NOT NAMED	coord: 17..175 score: 6.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08184	0.69	Barchart \| Table