Spo15761 (gene)

Overview
NameSpo15761
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00652 : 7159 .. 8219 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTTCAATTTAGAGGGCATTTCTTTATTACACACAAGTTCTCAAACTCTATCTCTACCTCTCTACCCCTCGTGCCTTCCTTCACTCAGCTCTCTGCGTCTCCACTTAGCAAAAACCACCTGTTTTCCGCCGGACCCGAAGCAAACACTGGTGTTCCGACTTGTCTCAACGGAACTTCCACTAGGCCCACCACCGGTCCACCGTTCGACAAACTGACGCTCCACCAAGCCTTCCACCGGCCCACGGCAGGTATGAAAAGAATCCTCTGTCTCTTTTAATAATTCGTTTTTTGTTTTGGATTGAGGATTGAGATAATTTGGTCAACTTTTAATTGATAATTTGCTTAATTTTTTATTGATTATTGGTTGCTGAATTGATAAAAGTTTCAAGCTTGTTTATCAATTTGGTGAATTTTTTAATGCATTTCTATATTTTATTAATTTATTTAACATAATTATCTACTCATGTGGGTTAATTGAGTGACATTAGTTCGTTAATTAGTGTCTTAATTGGTTAAATTGTCAAATTGATATGTTAAACAGATTGAATTTGTTACTCGGTCGTTTTCGAAGTTTTTGTGTGAATTCGTTGCTGCAATCGTAGACTTGTTGTGGAATTGGAGTAGTCAAAGAGTGTATTCTGGCTGTTTTTCTCAATATATATTAATGTTGATAGAAATTGGAAGTTTTGGACATGATTGCTTTGGTCATTCGTCGAAAATGTTACCATAGATTGCTCCCTAGTTACAAAGATGTGCTCGTAAATTCATGTAGTTTTTGTTTGAATGGTTGATATTATGGAAGACAAAAATAAGATTGGTGTTAGCACCAGATTCTTGGTCTTCAATTACAAGTAGTATTGTTGTACTTGAGTTTCTTTTGAAGGTAAATTATTGTATGTTTTTCCCTTAGATAGTTGTTTATTGTATTATGAGATAAGTTTGTACACCTTTGAAAACTCCTATGAATCTTGATTGACCCCCCCAATTTTAAATTCTCTAGATTCACCATTGCCCGAGAGTCCCGGAAATGCAAGTCATGCAACAGTTCTTCCTTGA

mRNA sequence

ATGGATTTTCAATTTAGAGGGCATTTCTTTATTACACACAAGTTCTCAAACTCTATCTCTACCTCTCTACCCCTCGTGCCTTCCTTCACTCAGCTCTCTGCGTCTCCACTTAGCAAAAACCACCTGTTTTCCGCCGGACCCGAAGCAAACACTGGTGTTCCGACTTGTCTCAACGGAACTTCCACTAGGCCCACCACCGGTCCACCGTTCGACAAACTGACGCTCCACCAAGCCTTCCACCGGCCCACGGCAGATTCACCATTGCCCGAGAGTCCCGGAAATGCAAGTCATGCAACAGTTCTTCCTTGA

Coding sequence (CDS)

ATGGATTTTCAATTTAGAGGGCATTTCTTTATTACACACAAGTTCTCAAACTCTATCTCTACCTCTCTACCCCTCGTGCCTTCCTTCACTCAGCTCTCTGCGTCTCCACTTAGCAAAAACCACCTGTTTTCCGCCGGACCCGAAGCAAACACTGGTGTTCCGACTTGTCTCAACGGAACTTCCACTAGGCCCACCACCGGTCCACCGTTCGACAAACTGACGCTCCACCAAGCCTTCCACCGGCCCACGGCAGATTCACCATTGCCCGAGAGTCCCGGAAATGCAAGTCATGCAACAGTTCTTCCTTGA

Protein sequence

MDFQFRGHFFITHKFSNSISTSLPLVPSFTQLSASPLSKNHLFSAGPEANTGVPTCLNGTSTRPTTGPPFDKLTLHQAFHRPTADSPLPESPGNASHATVLP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15761.1Spo15761.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo15761.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo15761.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo15761.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo15761.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0006121 mitochondrial electron transport, succinate to ubiquinone
biological_process GO:0048575 short-day photoperiodism, flowering
biological_process GO:0009736 cytokinin-activated signaling pathway
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0010104 regulation of ethylene-activated signaling pathway
biological_process GO:0080119 ER body organization
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0070932 histone H3 deacetylation
biological_process GO:0061647 histone H3-K9 modification
biological_process GO:0070933 histone H4 deacetylation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0051301 cell division
biological_process GO:0048825 cotyledon development
biological_process GO:0006281 DNA repair
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0019915 lipid storage
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0009909 regulation of flower development
biological_process GO:0050826 response to freezing
biological_process GO:0010162 seed dormancy process
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008284 positive regulation of cell proliferation
biological_process GO:0006487 protein N-linked glycosylation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0009845 seed germination
biological_process GO:0006396 RNA processing
biological_process GO:0032502 developmental process
cellular_component GO:0005829 cytosol
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045281 succinate dehydrogenase complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0045254 pyruvate dehydrogenase complex
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0000118 histone deacetylase complex
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046970 NAD-dependent histone deacetylase activity (H4-K16 specific)
molecular_function GO:0046969 NAD-dependent histone deacetylase activity (H3-K9 specific)
molecular_function GO:0097372 NAD-dependent histone deacetylase activity (H3-K18 specific)
molecular_function GO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific)
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
RNA-Seq Expression