Spo15812 (gene) | SpinachBase

Overview


Name	Spo15812
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ferredoxin
Location	chr2 : 28390625 .. 28391068 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGGCAGCAGCAACAACAATGGTGGCAGCTACCTTGGTAAGAAAGCCGCAAACTCCTCCTATGTTGGGAGCACTCCCTACCAACGTTGGCCAGGTCATGTTTGGGCTAAAGGCTGGTGGTCGAGGAGGAAGGGTGACAGCAATGGCTACCTACAAGGTAACCTTGGTTACACCTTCGGGTAGTCAGGTGATTGAGTGTGGCGATGATGAGTACATCTTGGATGCTGCTGAGGAGAAGGGAATGGACTTACCTTACTCATGCCGTGCAGGTGCGTGCTCTTCATGCGCCGGAAAGGTGACCTCAGGCAGTGTGGACCAATCAGACCAGAGCTTCTTAGAGGATGGACAGATGGAAGAAGGCTGGGTTCTCACATGTATTGCTTACCCTACCGGTGATGTCACTATTGAGACTCACAAAGAGGAGGAGCTCACTGCTTAA

mRNA sequence

ATGGCGGCGGCAGCAGCAACAACAATGGTGGCAGCTACCTTGGTAAGAAAGCCGCAAACTCCTCCTATGTTGGGAGCACTCCCTACCAACGTTGGCCAGGTCATGTTTGGGCTAAAGGCTGGTGGTCGAGGAGGAAGGGTGACAGCAATGGCTACCTACAAGGTAACCTTGGTTACACCTTCGGGTAGTCAGGTGATTGAGTGTGGCGATGATGAGTACATCTTGGATGCTGCTGAGGAGAAGGGAATGGACTTACCTTACTCATGCCGTGCAGGTGCGTGCTCTTCATGCGCCGGAAAGGTGACCTCAGGCAGTGTGGACCAATCAGACCAGAGCTTCTTAGAGGATGGACAGATGGAAGAAGGCTGGGTTCTCACATGTATTGCTTACCCTACCGGTGATGTCACTATTGAGACTCACAAAGAGGAGGAGCTCACTGCTTAA

Coding sequence (CDS)

ATGGCGGCGGCAGCAGCAACAACAATGGTGGCAGCTACCTTGGTAAGAAAGCCGCAAACTCCTCCTATGTTGGGAGCACTCCCTACCAACGTTGGCCAGGTCATGTTTGGGCTAAAGGCTGGTGGTCGAGGAGGAAGGGTGACAGCAATGGCTACCTACAAGGTAACCTTGGTTACACCTTCGGGTAGTCAGGTGATTGAGTGTGGCGATGATGAGTACATCTTGGATGCTGCTGAGGAGAAGGGAATGGACTTACCTTACTCATGCCGTGCAGGTGCGTGCTCTTCATGCGCCGGAAAGGTGACCTCAGGCAGTGTGGACCAATCAGACCAGAGCTTCTTAGAGGATGGACAGATGGAAGAAGGCTGGGTTCTCACATGTATTGCTTACCCTACCGGTGATGTCACTATTGAGACTCACAAAGAGGAGGAGCTCACTGCTTAA

Protein sequence

MAAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTPSGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEELTA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo15812.1	Spo15812.1	mRNA

Homology

[Close]

BLAST of Spo15812.1 vs. NCBI nr
Match: gi|902237551|gb|KNA24844.1| (hypothetical protein SOVF_011970 [Spinacia oleracea])

HSP 1 Score: 291.6 bits (745), Expect = 7.800e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


		  
Query: 1   MAAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP 60
           MAAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP
Sbjct: 1   MAAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP 60

Query: 61  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 120
           SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME
Sbjct: 61  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 120

Query: 121 EGWVLTCIAYPTGDVTIETHKEEELTA 148
           EGWVLTCIAYPTGDVTIETHKEEELTA
Sbjct: 121 EGWVLTCIAYPTGDVTIETHKEEELTA 147

[Close]

BLAST of Spo15812.1 vs. NCBI nr
Match: gi|731353790|ref|XP_010688241.1| (PREDICTED: ferredoxin-2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 222.2 bits (565), Expect = 5.800e-55
Identity = 111/143 (77.62%), Postives = 124/143 (86.71%), Query Frame = 1


		  
Query: 3   AAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTPSG 62
           A AATTM A TLV K QTP M+ A PTNVGQ +FGLKAG RGGR+TAMATYKVTL+TP G
Sbjct: 2   AVAATTM-AVTLVPKHQTPGMIAAFPTNVGQAVFGLKAGARGGRITAMATYKVTLITPEG 61

Query: 63  SQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEG 122
           ++ I C D+EYILDAAEE+G+DLPYSCRAGACSSCAGKVTSGSVDQSDQ++L+D Q+ EG
Sbjct: 62  TKKINCPDNEYILDAAEEQGLDLPYSCRAGACSSCAGKVTSGSVDQSDQNYLDDDQVSEG 121

Query: 123 WVLTCIAYPTGDVTIETHKEEEL 146
           WVLTCIA PT DVTIETHKE EL
Sbjct: 122 WVLTCIATPTSDVTIETHKEAEL 143

[Close]

BLAST of Spo15812.1 vs. NCBI nr
Match: gi|731315150|ref|XP_010690121.1| (PREDICTED: ferredoxin-1, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 219.2 bits (557), Expect = 4.900e-54
Identity = 110/147 (74.83%), Postives = 126/147 (85.71%), Query Frame = 1


		  
Query: 3   AAAATTMV--AATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP 62
           AA  TTM+  AAT V KPQ P M+GAL TN G+ +FGLKAG RGGRV AMATYKVTL+TP
Sbjct: 2   AATTTTMMGMAATFVPKPQLP-MMGALSTNTGRAVFGLKAGSRGGRVVAMATYKVTLITP 61

Query: 63  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 122
           SG+Q  EC DD Y+LDAAEE+G+DLPYSCRAG+CSSCAGK+ +GS+DQSDQSFL+D Q+E
Sbjct: 62  SGTQEFECPDDVYVLDAAEEQGLDLPYSCRAGSCSSCAGKLKTGSLDQSDQSFLDDDQIE 121

Query: 123 EGWVLTCIAYPTGDVTIETHKEEELTA 148
           EGWVLTC AYP+ DVTIETHKEEELTA
Sbjct: 122 EGWVLTCAAYPSSDVTIETHKEEELTA 147

[Close]

BLAST of Spo15812.1 vs. NCBI nr
Match: gi|870867395|gb|KMT18264.1| (hypothetical protein BVRB_2g024300 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 217.6 bits (553), Expect = 1.400e-53
Identity = 105/138 (76.09%), Postives = 121/138 (87.68%), Query Frame = 1


		  
Query: 10  VAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTPSGSQVIECG 69
           +AAT V KPQ P M+GAL TN G+ +FGLKAG RGGRV AMATYKVTL+TPSG+Q  EC 
Sbjct: 4   MAATFVPKPQLP-MMGALSTNTGRAVFGLKAGSRGGRVVAMATYKVTLITPSGTQEFECP 63

Query: 70  DDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIA 129
           DD Y+LDAAEE+G+DLPYSCRAG+CSSCAGK+ +GS+DQSDQSFL+D Q+EEGWVLTC A
Sbjct: 64  DDVYVLDAAEEQGLDLPYSCRAGSCSSCAGKLKTGSLDQSDQSFLDDDQIEEGWVLTCAA 123

Query: 130 YPTGDVTIETHKEEELTA 148
           YP+ DVTIETHKEEELTA
Sbjct: 124 YPSSDVTIETHKEEELTA 140

[Close]

BLAST of Spo15812.1 vs. NCBI nr
Match: gi|3023743|sp|O04683.1|FER1_MESCR (RecName: Full=Ferredoxin-1, chloroplastic; AltName: Full=Ferredoxin I; Flags: Precursor)

HSP 1 Score: 210.7 bits (535), Expect = 1.700e-51
Identity = 104/146 (71.23%), Postives = 118/146 (80.82%), Query Frame = 1


		  
Query: 2   AAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTPS 61
           A  AA +    +    P+TPPM  ALPTNVG+ +FGLK+    GRVTAMA YKVTLVTP 
Sbjct: 3   ATTAALSGATMSTAFAPKTPPMTAALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPE 62

Query: 62  GSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEE 121
           G Q +EC DD YILDAAEE G+DLPYSCRAG+CSSCAGKVTSGSV+Q D SFL+D Q++E
Sbjct: 63  GKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKE 122

Query: 122 GWVLTCIAYPTGDVTIETHKEEELTA 148
           GWVLTC+AYPTGDVTIETHKEEELTA
Sbjct: 123 GWVLTCVAYPTGDVTIETHKEEELTA 148

[Close]

BLAST of Spo15812.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0Y6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_011970 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 5.400e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


		  
Query: 1   MAAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP 60
           MAAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP
Sbjct: 1   MAAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP 60

Query: 61  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 120
           SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME
Sbjct: 61  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 120

Query: 121 EGWVLTCIAYPTGDVTIETHKEEELTA 148
           EGWVLTCIAYPTGDVTIETHKEEELTA
Sbjct: 121 EGWVLTCIAYPTGDVTIETHKEEELTA 147

[Close]

BLAST of Spo15812.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BP15_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g196730 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.000e-55
Identity = 111/143 (77.62%), Postives = 124/143 (86.71%), Query Frame = 1


		  
Query: 3   AAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTPSG 62
           A AATTM A TLV K QTP M+ A PTNVGQ +FGLKAG RGGR+TAMATYKVTL+TP G
Sbjct: 2   AVAATTM-AVTLVPKHQTPGMIAAFPTNVGQAVFGLKAGARGGRITAMATYKVTLITPEG 61

Query: 63  SQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEG 122
           ++ I C D+EYILDAAEE+G+DLPYSCRAGACSSCAGKVTSGSVDQSDQ++L+D Q+ EG
Sbjct: 62  TKKINCPDNEYILDAAEEQGLDLPYSCRAGACSSCAGKVTSGSVDQSDQNYLDDDQVSEG 121

Query: 123 WVLTCIAYPTGDVTIETHKEEEL 146
           WVLTCIA PT DVTIETHKE EL
Sbjct: 122 WVLTCIATPTSDVTIETHKEAEL 143

[Close]

BLAST of Spo15812.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1X1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g024300 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 9.900e-54
Identity = 105/138 (76.09%), Postives = 121/138 (87.68%), Query Frame = 1


		  
Query: 10  VAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTPSGSQVIECG 69
           +AAT V KPQ P M+GAL TN G+ +FGLKAG RGGRV AMATYKVTL+TPSG+Q  EC 
Sbjct: 4   MAATFVPKPQLP-MMGALSTNTGRAVFGLKAGSRGGRVVAMATYKVTLITPSGTQEFECP 63

Query: 70  DDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIA 129
           DD Y+LDAAEE+G+DLPYSCRAG+CSSCAGK+ +GS+DQSDQSFL+D Q+EEGWVLTC A
Sbjct: 64  DDVYVLDAAEEQGLDLPYSCRAGSCSSCAGKLKTGSLDQSDQSFLDDDQIEEGWVLTCAA 123

Query: 130 YPTGDVTIETHKEEELTA 148
           YP+ DVTIETHKEEELTA
Sbjct: 124 YPSSDVTIETHKEEELTA 140

[Close]

BLAST of Spo15812.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVB3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_137530 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.900e-50
Identity = 102/147 (69.39%), Postives = 121/147 (82.31%), Query Frame = 1


		  
Query: 3   AAAATTMV--AATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP 62
           AA  TTM+  A T V KPQ PPM+ ALP+N G+ +FGLK G RGGR+T MA YKVTLVTP
Sbjct: 2   AATTTTMMGMATTFVPKPQAPPMMAALPSNTGRSLFGLKTGSRGGRMT-MAAYKVTLVTP 61

Query: 63  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 122
           +G+   +C DD YILDAAEE+G+DLPYSCRAG+CSSCAGK+ +GS++Q DQSFL+D Q++
Sbjct: 62  TGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQID 121

Query: 123 EGWVLTCIAYPTGDVTIETHKEEELTA 148
           EGWVLTC AYP  DVTIETHKEEELTA
Sbjct: 122 EGWVLTCAAYPVSDVTIETHKEEELTA 147

[Close]

BLAST of Spo15812.1 vs. UniProtKB/TrEMBL
Match: F8SPG7_CAMSI (Chloroplast ferredoxin I OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.600e-46
Identity = 99/147 (67.35%), Postives = 117/147 (79.59%), Query Frame = 1


		  
Query: 1   MAAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP 60
           MAA+ ++TMV+ + +++ Q    L +LP NVGQ +FG+K GGRGGRVTAMA YKV L+TP
Sbjct: 3   MAASLSSTMVSTSFLQRQQPVTSLRSLP-NVGQALFGVK-GGRGGRVTAMAMYKVKLLTP 62

Query: 61  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 120
            G Q  EC DD YILD AEE G+DLPYSCRAG+CSSCAGK+T G VDQSD SFL+D QM+
Sbjct: 63  EGPQEFECPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKLTGGKVDQSDGSFLDDDQMD 122

Query: 121 EGWVLTCIAYPTGDVTIETHKEEELTA 148
            GWVLTC+AYP  DV IETHKEEELTA
Sbjct: 123 GGWVLTCVAYPQSDVVIETHKEEELTA 147

[Close]

BLAST of Spo15812.1 vs. ExPASy Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.100e-53
Identity = 104/146 (71.23%), Postives = 118/146 (80.82%), Query Frame = 1


		  
Query: 2   AAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTPS 61
           A  AA +    +    P+TPPM  ALPTNVG+ +FGLK+    GRVTAMA YKVTLVTP 
Sbjct: 3   ATTAALSGATMSTAFAPKTPPMTAALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPE 62

Query: 62  GSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEE 121
           G Q +EC DD YILDAAEE G+DLPYSCRAG+CSSCAGKVTSGSV+Q D SFL+D Q++E
Sbjct: 63  GKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKE 122

Query: 122 GWVLTCIAYPTGDVTIETHKEEELTA 148
           GWVLTC+AYPTGDVTIETHKEEELTA
Sbjct: 123 GWVLTCVAYPTGDVTIETHKEEELTA 148

[Close]

BLAST of Spo15812.1 vs. ExPASy Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 3.500e-52
Identity = 102/147 (69.39%), Postives = 121/147 (82.31%), Query Frame = 1


		  
Query: 3   AAAATTMV--AATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVTP 62
           AA  TTM+  A T V KPQ PPM+ ALP+N G+ +FGLK G RGGR+T MA YKVTLVTP
Sbjct: 2   AATTTTMMGMATTFVPKPQAPPMMAALPSNTGRSLFGLKTGSRGGRMT-MAAYKVTLVTP 61

Query: 63  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 122
           +G+   +C DD YILDAAEE+G+DLPYSCRAG+CSSCAGK+ +GS++Q DQSFL+D Q++
Sbjct: 62  TGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQID 121

Query: 123 EGWVLTCIAYPTGDVTIETHKEEELTA 148
           EGWVLTC AYP  DVTIETHKEEELTA
Sbjct: 122 EGWVLTCAAYPVSDVTIETHKEEELTA 147

[Close]

BLAST of Spo15812.1 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.100e-51
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


		  
Query: 51  ATYKVTLVTPSGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSD 110
           ATYKVTLVTPSGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSD
Sbjct: 1   ATYKVTLVTPSGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSD 60

Query: 111 QSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEELTA 148
           QSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEELTA
Sbjct: 61  QSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEELTA 97

[Close]

BLAST of Spo15812.1 vs. ExPASy Swiss-Prot
Match: FER_SILLB (Ferredoxin, chloroplastic OS=Silene latifolia subsp. alba GN=PETF PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.600e-49
Identity = 102/148 (68.92%), Postives = 122/148 (82.43%), Query Frame = 1


		  
Query: 1   MAAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAGGRGGRVTAMATYKVTLVT- 60
           MA+  +T  V+A+L+ K Q P +  +LPTN+GQ +FGLKAG R GRVTAMATYKVTL+T 
Sbjct: 1   MASTLSTLSVSASLLPKQQ-PMVASSLPTNMGQALFGLKAGSR-GRVTAMATYKVTLITK 60

Query: 61  PSGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQM 120
            SG+   +C DD Y+LD AEE+G+DLPYSCRAG+CSSCAGKV +GSVDQSDQSFL+D Q+
Sbjct: 61  ESGTVTFDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQI 120

Query: 121 EEGWVLTCIAYPTGDVTIETHKEEELTA 148
           E GWVLTC AYP+ DVTIETHKEEELTA
Sbjct: 121 EAGWVLTCAAYPSADVTIETHKEEELTA 146

[Close]

BLAST of Spo15812.1 vs. ExPASy Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.700e-46
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 1


		  
Query: 2   AAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAG-GRGGRVTAMATYKVTLVTP 61
           + A ++ +V+ + +R+ QTP  L +LP    Q +FGLK+   RGGRVTAMATYKV  +TP
Sbjct: 3   STALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITP 62

Query: 62  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 121
            G Q +EC +D Y+LDAAEE G+DLPYSCRAG+CSSCAGKV SGS+DQSDQSFL+D QM 
Sbjct: 63  EGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMS 122

Query: 122 EGWVLTCIAYPTGDVTIETHKEEEL 146
           EG+VLTC+AYPT DV IETHKEE +
Sbjct: 123 EGYVLTCVAYPTSDVVIETHKEEAI 147

[Close]

BLAST of Spo15812.1 vs. TAIR (Arabidopsis)
Match: AT1G10960.1 (ferredoxin 1)

HSP 1 Score: 186.8 bits (473), Expect = 9.500e-48
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 1


		  
Query: 2   AAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAG-GRGGRVTAMATYKVTLVTP 61
           + A ++ +V+ + +R+ QTP  L +LP    Q +FGLK+   RGGRVTAMATYKV  +TP
Sbjct: 3   STALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITP 62

Query: 62  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 121
            G Q +EC +D Y+LDAAEE G+DLPYSCRAG+CSSCAGKV SGS+DQSDQSFL+D QM 
Sbjct: 63  EGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMS 122

Query: 122 EGWVLTCIAYPTGDVTIETHKEEEL 146
           EG+VLTC+AYPT DV IETHKEE +
Sbjct: 123 EGYVLTCVAYPTSDVVIETHKEEAI 147

[Close]

BLAST of Spo15812.1 vs. TAIR (Arabidopsis)
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 184.5 bits (467), Expect = 4.700e-47
Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = 1


		  
Query: 2   AAAAATTMVAATLVRKPQTPPMLGALPTNVGQVMFGLKAG-GRGGRVTAMATYKVTLVTP 61
           + A ++ +V  + +R+   P  L +LP+   Q +FGLK+G  RGGRVTAMATYKV  +TP
Sbjct: 3   STALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITP 62

Query: 62  SGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQME 121
            G   +EC DD Y+LDAAEE G+DLPYSCRAG+CSSCAGKV SGSVDQSDQSFL+D Q+ 
Sbjct: 63  EGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIG 122

Query: 122 EGWVLTCIAYPTGDVTIETHKEEEL 146
           EG+VLTC AYPT DVTIETHKEE++
Sbjct: 123 EGFVLTCAAYPTSDVTIETHKEEDI 147

[Close]

BLAST of Spo15812.1 vs. TAIR (Arabidopsis)
Match: AT2G27510.1 (ferredoxin 3)

HSP 1 Score: 143.3 bits (360), Expect = 1.200e-34
Identity = 69/111 (62.16%), Postives = 81/111 (72.97%), Query Frame = 1


		  
Query: 36  FGLKAGGRGGRVTAMATYKVTLVTPSGSQ-VIECGDDEYILDAAEEKGMDLPYSCRAGAC 95
           FGLK     G  T  A YKV L+ P G +   E  DD+YILDAAEE G+DLPYSCRAGAC
Sbjct: 44  FGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGAC 103

Query: 96  SSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 146
           S+CAG++ SG+VDQSD SFLED  +E+G+VLTC+AYP  D  I THKE EL
Sbjct: 104 STCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Spo15812.1 vs. TAIR (Arabidopsis)
Match: AT5G10000.1 (ferredoxin 4)

HSP 1 Score: 109.0 bits (271), Expect = 2.500e-24
Identity = 55/112 (49.11%), Postives = 77/112 (68.75%), Query Frame = 1


		  
Query: 36  FGLKAG-GRGGRVTAMATYKVTLVTPSGS-QVIECGDDEYILDAAEEKGMDLPYSCRAGA 95
           FGL +  G  G+V A  + KV L++P G  Q IE  +D  IL++AE  G++LPYSCR+G 
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 96  CSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 146
           C +C GK+ SG VDQS  SFLE+ Q+++G++LTCIA P  D  + THK+ +L
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147

[Close]

BLAST of Spo15812.1 vs. TAIR (Arabidopsis)
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 3.600e-15
Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 1


		  
Query: 45  GRVTAMATYKVTLVTPSGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSG 104
           GR+ A A YKV +     +  +E   DE IL  A + G+D+PY C  G C +C  K+ +G
Sbjct: 46  GRIIARA-YKVVVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTG 105

Query: 105 SVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 146
           +VDQS    L D  +E G+ L C +YPT D  I+   EEEL
Sbjct: 106 TVDQSG-GMLSDDVVERGYTLLCASYPTSDCHIKMIPEEEL 144

The following BLAST results are available for this feature:

BLAST of Spo15812.1 vs. NCBI nr
BLAST of Spo15812.1 vs. UniProtKB/TrEMBL
BLAST of Spo15812.1 vs. ExPASy Swiss-Prot
BLAST of Spo15812.1 vs. TAIR (Arabidopsis)

BLAST of Spo15812.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902237551\|gb\|KNA24844.1\|	7.8e-76	100.	hypothetical protein SOVF_0119...	[more]
gi\|731353790\|ref\|XP_010688241.1\|	5.8e-55	77.6	PREDICTED: ferredoxin-2-like [...	[more]
gi\|731315150\|ref\|XP_010690121.1\|	4.9e-54	74.8	PREDICTED: ferredoxin-1, chlor...	[more]
gi\|870867395\|gb\|KMT18264.1\|	1.4e-53	76.0	hypothetical protein BVRB_2g02...	[more]
gi\|3023743\|sp\|O04683.1\|FER1_MESCR	1.7e-51	71.2	RecName: Full=Ferredoxin-1, ch...	[more]

BLAST of Spo15812.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S0Y6_SPIOL	5.4e-76	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BP15_BETVU	4.0e-55	77.6	Uncharacterized protein OS=Bet...	[more]
A0A0J8D1X1_BETVU	9.9e-54	76.0	Uncharacterized protein OS=Bet...	[more]
A0A0K9QVB3_SPIOL	3.9e-50	69.3	Uncharacterized protein OS=Spi...	[more]
F8SPG7_CAMSI	2.6e-46	67.3	Chloroplast ferredoxin I OS=Ca...	[more]

BLAST of Spo15812.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
FER1_MESCR	1.1e-53	71.2	Ferredoxin-1, chloroplastic OS...	[more]
FER1_SPIOL	3.5e-52	69.3	Ferredoxin-1, chloroplastic OS...	[more]
FER2_SPIOL	5.1e-51	100.	Ferredoxin-2 OS=Spinacia olera...	[more]
FER_SILLB	1.6e-49	68.9	Ferredoxin, chloroplastic OS=S...	[more]
FER1_ARATH	1.7e-46	63.4	Ferredoxin-1, chloroplastic OS...	[more]

BLAST of Spo15812.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G10960.1	9.5e-48	63.4	ferredoxin 1	[more]
AT1G60950.1	4.7e-47	63.4	2Fe-2S ferredoxin-like superfa...	[more]
AT2G27510.1	1.2e-34	62.1	ferredoxin 3	[more]
AT5G10000.1	2.5e-24	49.1	ferredoxin 4	[more]
AT4G14890.1	3.6e-15	41.5	2Fe-2S ferredoxin-like superfa...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 60..132 score: 3.6
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROFILE	PS51085	2FE2S_FER_2	coord: 53..143 score: 13
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	unknown	SSF54292	2Fe-2S ferredoxin-like	coord: 45..144 score: 5.37
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 89..97 scor
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAMs	TIGR02008	TIGR02008	coord: 51..146 score: 2.4
IPR012675	Beta-grasp domain	GENE3D	3.10.20.30		coord: 49..146 score: 4.5
None	No IPR available	PANTHER	PTHR19370	NADH-CYTOCHROME B5 REDUCTASE	coord: 30..146 score: 1.3
None	No IPR available	PANTHER	PTHR19370:SF120	FERREDOXIN-1, CHLOROPLASTIC-RELATED	coord: 30..146 score: 1.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0022900	electron transport chain
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0006364	rRNA processing
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009637	response to blue light
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009744	response to sucrose
biological_process	GO:0010114	response to red light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010218	response to far red light
biological_process	GO:0010155	regulation of proton transport
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005198	structural molecule activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo10927	0.81	Barchart \| Table
Spo25138	0.79	Barchart \| Table
Spo19731	0.76	Barchart \| Table
Spo02439	0.69	Barchart \| Table