Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTCCACAAAGAGCAATGACCAAGAAGAAGAAAGAAGAGAATTTGATGAAACAAAATTAGGAGTTAAGGGACTTGTTGATGCTGGTGTTACAACCATTCCTTCCATCTTCATTAACCCAATTTCTAAACAACCTTCACCTCAAACAACTAATATCGTTGGTGTTGATGGTGGTTTTAATTTACCAATTATTAATCTTCACACTAACAAAAATAATATAGGTCATTGCAATTGGAAGAAGGTTGTTGAGGATATTAGAGAAGCCTCGGAGACATGGGGGTTTTTCCAAGTGATAAATCATGGAATTCCAGACATGGTTTTGGAAGAGACATTGAAAGGAGTGAAAGAGTTTTTTGAGCTAGATAATCAAGTGAAAAAACATTATTATTCAAGAGACTTTGGAAATGATAAGTTTGCTTATCATAGCAATGCTGATCTTTATACTTCAGATGTAGTTAGTTGGAGGGACAATTTTCTTTGTTATATGTCCCCTAATCCTCCTAGTCCGGATCAATTGCCTCCTCCTTGCAGGTGTGTCTCTTTCTCATATTCGACCCCCTTATATAATTCTTATTTTGTCATGAATTAGCTAGGTTTTGTTAACTTCATCTTATTTCTCGTGGTATAATATGATTAGATTTGAACCTATTTTTCTCGATTACTTATTTTTTCTTATCTAATCGATCTTATATGATTTTTACGTAATAAGATTTAAAATTAAATTATGATTGATATTAATATGTAGGTTAATTATAGTAATTAATAGTAAATGAATTTAGAAAAATATTGTAATTATTAGAAACACAAGAATGTTTTGACTCTACTCCGATCTTCAACTACAACTAGCTTTTGAGCCCGTTTAAAGAACAGGCGATTGTACAATGGTTATGTAGTCTATTTTTTTATGTTATAATTTTATTGAGTTTGTGATATTAGAAAGAATATACTTCGTATGATTTAAATAGAGGTAAATTTTGAAAGTTGAAAGAATACATAAATTAAAAAATGTTTTAGTATTGAGTGTTAATCGGGAAGATGGAGTGAAAAATGTTGAATGATAGATTGGTGTATTGATGTTGTATGAGGAAGATGGAATGAAAGAGGTGATTGGAGTTGTATAACATATCAAACAACAAATAAAAAATAAAATAAAAAACCTAAAAAGACGACACGTGTAATCTAATCAAATGTGTTGACACATGTCACCTAATCAAATGTGGTTTTCCTTTCTATAGACTAGGTATAGATTAAAAAAATTGTGATTTAACTAGCACTTATATTATTGGCTTTGAATTATCTATTTAATACATTTTTTTATAAATATTCTTAAAAACTAAGATGTATTAATATGAAATATTGCATTATGTAATGAACAAAAGGTGAAATAAGACAAAAAAATAACCTATTCTTGAACAACCTAACAAGATGTTGGACGCCCATTATGGTCTTTATTTTATTTAATAATGCATGATCAACTCATTTTTCGTTTAGATCCAATTTGTTAAGAACCTAATTTTCTAATCTTTTCTAATCACGAGTCTGATTTAGATTGAAGTAGTATGATCTGATCTGGAAAATAAGCTTCTCAGTTATAGACATATTTATTTTGAGATGGTTGGATCTAATTCCGATATGATTCAATTGTTTTGAATTCATAAATCTGTAGTTAATGTTTAATGTAAAATTACTAACAAGATAATATCTATTTTAATATGGTATGACCTTGACTGAACTGGACTAACCATAGATTGATCTTGTTTGATCCAAGTTTTCTTATTTAGTTCAATACGATCCGAACTGGTATGATCTTCTGTGATTTGATCAACTTGATCTAGTATAAACTTATTTGATCTAGTATGACTTGATCTGATCTGTTGTAATCTATATTTTAAAGGCATATAATTTGTCAAAAATTACCTTATAAACTGGTTTTTTTGCGAGAAAGTACCTTACAAAAAAGGTTGTAATTAACTACTTCCTCCATTCCAAAACGTTCTTCAAATTTTTATAATTCTTCTTATTAATTGGAATTAAAATATTAATGGTCAAATTAGTGCGTTGGACACCACACTTAATGGAACGTGAGGAAACTTATGGAATGGAGGGAGTACCTTAGAAAATTTTCATGTTAAGATACTACATTTGGTCGGGTTATGACCATTGATTCAAAAATCTGGGCTTGACTTTACTAAGTGCATCTCCGTGACATCTCATGGAAAGGGGTATTTAAAGGCACGTGAGATGCATATAGAAAAATCAATCCTTAATTAAACATTGAGTCAATGTTCATAATTCGGACAAAGATAGTAAACCCTCCGTTCCATAATGTTCCTAACCTTTCGATTATGTGCGATCTCTAATGCATTACTTTTACCATTAATAGTTTTTATTTTCGCATTCATCAAAATTATACAATTTGATATTCAAAAAGTTATATTGAAAGGAATATAATGAGATCTCACAAGTTATTATATTTTCGGTTATGTATAGTTGTATACTACTAATTACGGTCAAAATAGTATTGTCGAAAGAATTTTACTAGAAAAAAATGAAGATTGTTGTTTTGGAAGTATTCTCAAAAGTACTTTTTTTGGAAGTCCATATTTTTTAAGCAACAGAAAACGCAGTATTATCGAAAAATGAAGATTGTTGTTTTGTTTTCTTTACTTTGTTATTATATTGTTGCACTAATTAGATGTTTGCTGAATAGATATCAATTATTTTTGAGGAACTTTGTGAACAGTTTTTCTTACCTTGTAGTATTTGAGGATAAAAGATGTAAGAAAACGATTTTGCTTTCTATTTATTTTCGCACATACCGCTTGCATATAAGACTAGTAAAAATAATAATAACAAAATACCACAATAATGCAATTTATAATAATAGTAACTTTTTGTAAAATAATTTTATGATCCTCTCTAAAGATAATTTTTTATAATTTTATCTCATCTAATTAGGTATGAAATAATATGGTATTGAAATAAGGTAAACTGAGTACGGTCTTAGTTAGTTTGTCACATTATTAAGGAATTGTTAATATATAAGTGTATGGTGCTACTCTATGCATTAACATACAATTGACTTTACTATATATGAGAATTCGTTCTTAGGTTCATTAATTCCCCTAATAGAGGAAGTCCAAATATATGCCTGGCATGTATTTGCAAAAACATGTCAACCCCAAATAAAAAGGTAAATGTAAATGTTAAATATTTTTGGGGGAAATGTATAACGGAATTGTAAATTTGTAAAACGGGGTGGTGATTTGGCATTGCTGAGTTGGTATTGGTATTACAAAAATGGTATTGGTATTACAAAAATGGTACTAAACTTTTTTTAAATGAAATTCATTTTCCTTAAATGGTACTCGTTTTGTACTAAATTTTATAAAGTGGTATTAATATCACAAAAATGGTGCTAAATATTTTAAAATGGTATTCATATTACAAAATTGGTACTCAATTTTTCTATATAGGATCCAAGTTGGCAAACGGAGTTGACTATATATTCAACAATTTCAAAATGGCTGGAAAATTACAAACAAGCCCATAGCATGTATTTCATAATACATGTCTGGCTGCGATTTTAACGCCCTCCCCCTAATATGCAGCAAAATAATAATTTATTTATAAATTGTAGGGAGATATTAATAGAGTATTCAAAGCAAGTGAAGAAGGTGGGCAAAATTTTGTTCGAGCTACTATCAGAGGCACTAGGATTGCAACAATCCCAGCTAGATTGTCCAGATGGGCTAATTGTTTTAGGTCATTATTATCCAGCTTGTCCACAACCCGAATTAACAATCGGCACCCCAGAACATGCTGATGGTTCCTTCATAACTATTTTGTTGCAAGACCAAGTTGGTGGTCTCCAAGTTCTTCGTCAGGACTACTGGGTTGATGTTCCTTATACTCCAGGGGCTATAATCGTTAATGTCGGGAACGCTTTACAGGTATCTTATGTTTTTTTTTTCCCAAAAAATCCATTCAATTACATACTACCTCTGTTTCAGAAAGTTCTTTACGCTTTGAAAAATGTGTTCAAAGTATAAAAACTTTGACCGTAAATTCTCACCATTATATACATCAAAACGTTACATGTAAGATCTTGTTAGATTGGTCTCAGGATGTATTTTCAGAATATCAAATTTTTATANGCGTTTAGGTAAAATCAATCTTTTCGTATTTTGAGAGTTATATGTTAACTCAAATTCAAGAGTATAACTTCAAACAGTTTTGTAAAATCAGTTTAAAAACTTTGACGTTTATCTTTTTTGTAAAATCAAAACTGATTTATTTCGTTTCACGATATAACTAGGACTCTTCAAAATACTCTGTTCCCATACTAAGCTTGTACTAAATTACGCTGGTCTTATACCTTTCGACACTTATAGAATTTGCTTGTTTTGATCCTTGATTTAATCTTGCCACGTACTTTGAACTTGATTACTTCATAGCTCCCTAGCTTGCTTCGGTTTTGCATTTGTTCTTCTTAGTTATTAACCTGTTCCTGACATTCTCCAAAACGAACTATTAGTAGAAGGTAAGCTTGTCATCATCAAAACCAGGAATCAACATTAATGACATGTGAAATTCTTTGTTATGCAGTGGATTTGCCACGACTGGAGTGACGAGCATTGCCTAAAGTTCTTGAAGAATTGCTTTGCTTCCTTACCAGACCATGGAAAAGTGATTGTCTGCGAGTACATCCTCCCAGTGGCACCGGAAACTAGCCACGCAGCAAGGACCGTCTTCCACGTGGATGCGATCATGTTAGCTCACAACCCGGGTGGTAAAGAAAGGACAGAACAAGAGTTTGAGGCCTTGGCTAAAGGATCTGGATTTGAAGGGTTTAGAGTGGCATGCTCAGCTTATGATACTAAGGTCATGGAGTTTTTGAAAAAGTCAAGTTAA ATGATGTCCACAAAGAGCAATGACCAAGAAGAAGAAAGAAGAGAATTTGATGAAACAAAATTAGGAGTTAAGGGACTTGTTGATGCTGGTGTTACAACCATTCCTTCCATCTTCATTAACCCAATTTCTAAACAACCTTCACCTCAAACAACTAATATCGTTGGTGTTGATGGTGGTTTTAATTTACCAATTATTAATCTTCACACTAACAAAAATAATATAGGTCATTGCAATTGGAAGAAGGTTGTTGAGGATATTAGAGAAGCCTCGGAGACATGGGGGTTTTTCCAAGTGATAAATCATGGAATTCCAGACATGGTTTTGGAAGAGACATTGAAAGGAGTGAAAGAGTTTTTTGAGCTAGATAATCAAGTGAAAAAACATTATTATTCAAGAGACTTTGGAAATGATAAGTTTGCTTATCATAGCAATGCTGATCTTTATACTTCAGATGTAGTTAGTTGGAGGGACAATTTTCTTTGTTATATGTCCCCTAATCCTCCTAGTCCGGATCAATTGCCTCCTCCTTGCAGGGAGATATTAATAGAGTATTCAAAGCAAGTGAAGAAGGTGGGCAAAATTTTGTTCGAGCTACTATCAGAGGCACTAGGATTGCAACAATCCCAGCTAGATTGTCCAGATGGGCTAATTGTTTTAGGTCATTATTATCCAGCTTGTCCACAACCCGAATTAACAATCGGCACCCCAGAACATGCTGATGGTTCCTTCATAACTATTTTGTTGCAAGACCAAGTTGGTGGTCTCCAAGTTCTTCGTCAGGACTACTGGGTTGATGTTCCTTATACTCCAGGGGCTATAATCGTTAATGTCGGGAACGCTTTACAGTGGATTTGCCACGACTGGAGTGACGAGCATTGCCTAAAGTTCTTGAAGAATTGCTTTGCTTCCTTACCAGACCATGGAAAAGTGATTGTCTGCGAGTACATCCTCCCAGTGGCACCGGAAACTAGCCACGCAGCAAGGACCGTCTTCCACGTGGATGCGATCATGTTAGCTCACAACCCGGGTGGTAAAGAAAGGACAGAACAAGAGTTTGAGGCCTTGGCTAAAGGATCTGGATTTGAAGGGTTTAGAGTGGCATGCTCAGCTTATGATACTAAGGTCATGGAGTTTTTGAAAAAGTCAAGTTAA ATGATGTCCACAAAGAGCAATGACCAAGAAGAAGAAAGAAGAGAATTTGATGAAACAAAATTAGGAGTTAAGGGACTTGTTGATGCTGGTGTTACAACCATTCCTTCCATCTTCATTAACCCAATTTCTAAACAACCTTCACCTCAAACAACTAATATCGTTGGTGTTGATGGTGGTTTTAATTTACCAATTATTAATCTTCACACTAACAAAAATAATATAGGTCATTGCAATTGGAAGAAGGTTGTTGAGGATATTAGAGAAGCCTCGGAGACATGGGGGTTTTTCCAAGTGATAAATCATGGAATTCCAGACATGGTTTTGGAAGAGACATTGAAAGGAGTGAAAGAGTTTTTTGAGCTAGATAATCAAGTGAAAAAACATTATTATTCAAGAGACTTTGGAAATGATAAGTTTGCTTATCATAGCAATGCTGATCTTTATACTTCAGATGTAGTTAGTTGGAGGGACAATTTTCTTTGTTATATGTCCCCTAATCCTCCTAGTCCGGATCAATTGCCTCCTCCTTGCAGGGAGATATTAATAGAGTATTCAAAGCAAGTGAAGAAGGTGGGCAAAATTTTGTTCGAGCTACTATCAGAGGCACTAGGATTGCAACAATCCCAGCTAGATTGTCCAGATGGGCTAATTGTTTTAGGTCATTATTATCCAGCTTGTCCACAACCCGAATTAACAATCGGCACCCCAGAACATGCTGATGGTTCCTTCATAACTATTTTGTTGCAAGACCAAGTTGGTGGTCTCCAAGTTCTTCGTCAGGACTACTGGGTTGATGTTCCTTATACTCCAGGGGCTATAATCGTTAATGTCGGGAACGCTTTACAGTGGATTTGCCACGACTGGAGTGACGAGCATTGCCTAAAGTTCTTGAAGAATTGCTTTGCTTCCTTACCAGACCATGGAAAAGTGATTGTCTGCGAGTACATCCTCCCAGTGGCACCGGAAACTAGCCACGCAGCAAGGACCGTCTTCCACGTGGATGCGATCATGTTAGCTCACAACCCGGGTGGTAAAGAAAGGACAGAACAAGAGTTTGAGGCCTTGGCTAAAGGATCTGGATTTGAAGGGTTTAGAGTGGCATGCTCAGCTTATGATACTAAGGTCATGGAGTTTTTGAAAAAGTCAAGTTAA MMSTKSNDQEEERREFDETKLGVKGLVDAGVTTIPSIFINPISKQPSPQTTNIVGVDGGFNLPIINLHTNKNNIGHCNWKKVVEDIREASETWGFFQVINHGIPDMVLEETLKGVKEFFELDNQVKKHYYSRDFGNDKFAYHSNADLYTSDVVSWRDNFLCYMSPNPPSPDQLPPPCREILIEYSKQVKKVGKILFELLSEALGLQQSQLDCPDGLIVLGHYYPACPQPELTIGTPEHADGSFITILLQDQVGGLQVLRQDYWVDVPYTPGAIIVNVGNALQWICHDWSDEHCLKFLKNCFASLPDHGKVIVCEYILPVAPETSHAARTVFHVDAIMLAHNPGGKERTEQEFEALAKGSGFEGFRVACSAYDTKVMEFLKKSS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15870.1 vs. NCBI nr
Match: gi|902230456|gb|KNA21868.1| (hypothetical protein SOVF_039320, partial [Spinacia oleracea]) HSP 1 Score: 402.1 bits (1032), Expect = 1.100e-108 Identity = 194/284 (68.31%), Postives = 230/284 (80.99%), Query Frame = 1
BLAST of Spo15870.1 vs. NCBI nr
Match: gi|902230766|gb|KNA21985.1| (hypothetical protein SOVF_038320 [Spinacia oleracea]) HSP 1 Score: 386.7 bits (992), Expect = 4.600e-104 Identity = 189/291 (64.95%), Postives = 229/291 (78.69%), Query Frame = 1
BLAST of Spo15870.1 vs. NCBI nr
Match: gi|902160439|gb|KNA06447.1| (hypothetical protein SOVF_180930 [Spinacia oleracea]) HSP 1 Score: 384.0 bits (985), Expect = 3.000e-103 Identity = 208/373 (55.76%), Postives = 261/373 (69.97%), Query Frame = 1
BLAST of Spo15870.1 vs. NCBI nr
Match: gi|731378215|ref|XP_010668102.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 344.7 bits (883), Expect = 2.000e-91 Identity = 184/365 (50.41%), Postives = 242/365 (66.30%), Query Frame = 1
BLAST of Spo15870.1 vs. NCBI nr
Match: gi|731322807|ref|XP_010672098.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 339.3 bits (869), Expect = 8.500e-90 Identity = 168/289 (58.13%), Postives = 210/289 (72.66%), Query Frame = 1
BLAST of Spo15870.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQX1_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_039320 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 7.400e-109 Identity = 194/284 (68.31%), Postives = 230/284 (80.99%), Query Frame = 1
BLAST of Spo15870.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RR21_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038320 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 3.200e-104 Identity = 189/291 (64.95%), Postives = 229/291 (78.69%), Query Frame = 1
BLAST of Spo15870.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGT5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_180930 PE=3 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 2.100e-103 Identity = 208/373 (55.76%), Postives = 261/373 (69.97%), Query Frame = 1
BLAST of Spo15870.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B1M6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_014290 PE=3 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 1.400e-91 Identity = 184/365 (50.41%), Postives = 242/365 (66.30%), Query Frame = 1
BLAST of Spo15870.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CUP5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g056560 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 5.900e-90 Identity = 168/289 (58.13%), Postives = 210/289 (72.66%), Query Frame = 1
BLAST of Spo15870.1 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.700e-80 Identity = 149/283 (52.65%), Postives = 196/283 (69.26%), Query Frame = 1
BLAST of Spo15870.1 vs. ExPASy Swiss-Prot
Match: ACCH6_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.800e-77 Identity = 149/294 (50.68%), Postives = 197/294 (67.01%), Query Frame = 1
BLAST of Spo15870.1 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 4.800e-77 Identity = 150/290 (51.72%), Postives = 197/290 (67.93%), Query Frame = 1
BLAST of Spo15870.1 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 286.6 bits (732), Expect = 4.100e-76 Identity = 141/288 (48.96%), Postives = 197/288 (68.40%), Query Frame = 1
BLAST of Spo15870.1 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 7.700e-75 Identity = 138/285 (48.42%), Postives = 195/285 (68.42%), Query Frame = 1
BLAST of Spo15870.1 vs. TAIR (Arabidopsis)
Match: AT1G06620.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 300.4 bits (768), Expect = 1.500e-81 Identity = 149/283 (52.65%), Postives = 196/283 (69.26%), Query Frame = 1
BLAST of Spo15870.1 vs. TAIR (Arabidopsis)
Match: AT1G04350.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 290.4 bits (742), Expect = 1.600e-78 Identity = 149/294 (50.68%), Postives = 197/294 (67.01%), Query Frame = 1
BLAST of Spo15870.1 vs. TAIR (Arabidopsis)
Match: AT1G06650.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 282.3 bits (721), Expect = 4.300e-76 Identity = 138/285 (48.42%), Postives = 195/285 (68.42%), Query Frame = 1
BLAST of Spo15870.1 vs. TAIR (Arabidopsis)
Match: AT1G06640.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 281.6 bits (719), Expect = 7.400e-76 Identity = 146/297 (49.16%), Postives = 200/297 (67.34%), Query Frame = 1
BLAST of Spo15870.1 vs. TAIR (Arabidopsis)
Match: AT5G59530.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 280.4 bits (716), Expect = 1.600e-75 Identity = 143/285 (50.18%), Postives = 191/285 (67.02%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15870.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15870.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15870.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo15870.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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