Spo15983 (gene)

Overview
NameSpo15983
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 4180586 .. 4181299 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCACAGTACAACGAACCTGTTGTACGGTAAAGACGCTCGAGAACCAATAAGCATAAGCCACAGTCCACATTCGTATGTTCATACGGAACACAATACAACGAACCGGTTGTACTGTAAAGACGCTCAAGAGCCAATAAGCATAAGCCACAATCCACATTCGTATGTTCATACGGAACACAATGCAACGAACCGGTTGTACGGTAAAGACGCTCGAGAACCAATAAGCATAAGCCACAGTCCACATTCGTATGTTCATACAGAACACAATACAACGAACCGGTTGTCCGATAAAGACGCTCGAGAACCAATAAACATAAGCCACAGTCCACATTCGTATGTTCATACGGAGCACAATACAACAAACCGATTGTACGGTAAAGATGCTCGAGAACCAATAAGCACAAGCCACATTCCACATTCCAATGTACACAGCTGCAGTTTACGGCTATACGCAACCCCCCACCAAAAAAAATTAAAAAATGAAAAAGAAAAGAGGAGAGAGAAAGAGAATCCCCCCCAATTTAAAGTAATTCCCTTCACTAATCTTCCTTTTCCTTTTTCCTCCCTTCTTCCGGCGGAAATCGAAAACCCTCCACTCCCTCCTTCCTCCCCCTTCGCAAAACCAGAAGAATTCGAAGCGGTGTTCTGCAATTTTGCGCGATTCTCAGCGCGAGAAGAGAGAGAGAGAATTTCTTCTCTTCTTCTCTGA

mRNA sequence

ATGGAGCACAGTACAACGAACCTGTTGTACGGTAAAGACGCTCGAGAACCAATAAGCATAAGCCACAGTCCACATTCCTGCAGTTTACGGCTATACGCAACCCCCCACCAAAAAAAATTAAAAAATGAAAAAGAAAAGAGGAGAGAGAAAGAGAATCCCCCCCAATTTAAAGTAATTCCCTTCACTAATCTTCCTTTTCCTTTTTCCTCCCTTCTTCCGGCGGAAATCGAAAACCCTCCACTCCCTCCTTCCTCCCCCTTCGCAAAACCAGAAGAATTCGAAGCGGTGTTCTGCAATTTTGCGCGATTCTCAGCGCGAGAAGAGAGAGAGAGAATTTCTTCTCTTCTTCTCTGA

Coding sequence (CDS)

ATGGAGCACAGTACAACGAACCTGTTGTACGGTAAAGACGCTCGAGAACCAATAAGCATAAGCCACAGTCCACATTCCTGCAGTTTACGGCTATACGCAACCCCCCACCAAAAAAAATTAAAAAATGAAAAAGAAAAGAGGAGAGAGAAAGAGAATCCCCCCCAATTTAAAGTAATTCCCTTCACTAATCTTCCTTTTCCTTTTTCCTCCCTTCTTCCGGCGGAAATCGAAAACCCTCCACTCCCTCCTTCCTCCCCCTTCGCAAAACCAGAAGAATTCGAAGCGGTGTTCTGCAATTTTGCGCGATTCTCAGCGCGAGAAGAGAGAGAGAGAATTTCTTCTCTTCTTCTCTGA

Protein sequence

MEHSTTNLLYGKDAREPISISHSPHSCSLRLYATPHQKKLKNEKEKRREKENPPQFKVIPFTNLPFPFSSLLPAEIENPPLPPSSPFAKPEEFEAVFCNFARFSAREERERISSLLL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15983.1Spo15983.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo15983.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15983.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15983.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15983.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0016197 endosomal transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0016874 ligase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression