Spo15984 (gene)

Overview
NameSpo15984
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUbiquitin-conjugating enzyme
Locationchr3 : 4181461 .. 4185553 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCGAAAAGGATTTTGAAGGAGCTCAAGGATCTGCAGAAAGATCCTCCTACTTCCTGCAGTGCCGGTATAATTTGATATATTTCTTTTAGAATTCCCGTTGTTAATCGTTGAGTGATTGAGTTTGTTGATTGTATGGTTTGATTGGCTGAGAATGGAATTTATTCGATTGCATGATGATTTATGTGAATTTTGGATGATTTTTTTTTTCCCTGTTGTTAATGTTTCCGTCGATATTCTGTTCTAGTGAGCTAGTGATGACTGATGAGTGATTGCAAAATGTTGTTGGCATCATTTGTAGGACCATGAGGACTGAAACAAATGCAAATTATTGTGTGTTGTTTGATTTGTAAACCGTGTTTTTGAGTGCAAATTAAGGTTGATTCTTATGATTGTGGTTTTCAGCCATACTGACTTTAGGTTTTCAGTGCTCATCTGAGGGTGGGGATGGATACTGTTGAGAAGTTCATATAGAGGAGAAATTGAGTCAATATAAGATTATAAACAGGGGAAAGTAGCTGTAATTAAAATCCTTCTATAAGGGGATGCTTATTGTTTATCCATAGGGGGTTAACTGACTAATCTCTGCAGAATTTGGTTAAATGATCTCAGTTAGGTTTTCTTATGTGTCTTTCTTGCTGGGAAGTAATTGGCAAGTTCCGGCTATTACCTTCTCCTGTTCAAGGGTATGATGGAAGCAACACCTTTGCTGGCTTAATCATCTGACTGTCCTTAGTCTCCTTACTATACCTTGGCCAGGAACTTTTTAGTGGGGAATTGGGCAGTGATATAGTAAGGATGGTAGTGATACTATTCTTTACAGCACTGTTGTGAAGCTGCATCTTGTATTTGATCAATGCTCGTTGTGTACTATGCCGACTCTTGTATGGATTAGAAAAGTTTGTTGATTATCCTTCCTTTTTTGTTGAATATGCAGCAATCATGTACTATTCTCTGCTTGCGTGGATTTAAAATATTTAGGGTTTTTACACTTTCATGCATAGTATTATAGTAATCATGCATTTTTCTTGAGTTAACTGAAATTTGATAGTAGTTAATGTCTGGTTCTTTGACCAGGGGAATATTCACCTGTTTGCTATTCCATTTTTGCTTCATGTGATTGGTAAATTCTTGTGCCTCATGGAAGCCTTCTATACCACAAGTTCATGAAATACGTAGTTTTCTGTTCTCTTGTCCTACAGTTTTTTGGATAAAGGGTTTTTGTTCTTATTAAAAATTTCAGCCTTTGAGGTTAGAGTGTTAGACAAGTTGTGTTATCAAGCTCTTCTTTAAGTTTATCTGCCAATGTTGTTGGCTAATGAGTATTTTTGAAACTTGGAGGATTCTTACTTTCTTCTCTGCTTGACATTCATACTTAATTACTTATAATTTCCACCAAGTTTCTTTTCTATGTGTGGATTTTCGTCAAAGTTCTCAGAAAAATTGGTTTTTCTTTTGTATAATTGGTCTTTCTTTTGTATATTTTGGCCTTTTGGGCTCGAATTTTGAAATAAATATATTTTTTGGTTGTGTTCCGTATGGTGATCTGCCAAACTCAATTTCTCCTTTTTACAATTATCCTGTCAAATCTTTTATCAATCCTTTGAATCCTACATCCCAAGCCTCTGCCATATAGTCCTATTATGGTAGTAGGGCATGCTATTCTCCAAAAGCTACTGTCAGAGTTGATGGGTCCCCTATGGAAGGATATTATATTTTTTGGTTGTGTTCCGTATGGTGATCTGCCAAACTCAATTTCTCCTTTTTACAATTATCCTGTCAAATCTTTTATCAATCCTTTGAATCCTACATCCCAAGCCTCGACCATATAGTCCTATTATGGTAGTAGGGCATGCTATTCTCCAAAAGCTACTGTCAGAGTTGATGGGTCCCCTATGGAAGGATATCAGGGTCTCTCGTAAACGGCGCTTGCATTCCTCTACAATTTGATTCCTTATCGAGGACATGTACATATGTTTTGAGTTCTACTGAAAAGGAAAGGTACACTAATGCAACACATAGTTGATGAGTTTTATGCTTGATGAGTTGATCCTTTTCGTGAGAGGTGAACGTGAAATGTCTTTTCTTGTCTGATAAATTATAAGCGGGAAAGAATAAGTTTATTTTATTCAATTGTATGCTGTTACTGCTATCAGTAAGCCCCCTATCAGTATAACTGTTAGGTTCATATTGTGAGTATGCCTGCAAATCTCCCAGCTGGTCAGCTTGATCTTGAGCTATTTATCTTTGAAGCAAGCTTATTTTAGGAGTTTATGAGTATTTTTTTTAAACCTGCAATAGCATTCTTTTTTGTTAACCTACAATGATTGTTTTCTTGTTTTAGGATATTATATTGAATGTGTTCTTTCTGTTGCTTCTCAGGTCCCGTGGGTGAAGACATGTTCCATTGGCAAGCAACCATTATGGGTCCTCCTGACAGTCCTTATGCAGGGGGTGTTTTCCTCGTCACTATTCATTTCCCCCCAGATTATCCATTTAAGCCCCCCAAGGTATTTATTATTTAATTCGTTAGGTGTGTTGCCTCTCAATTGTTCTAAGAGTAGTCAGAAGTGCTGCTAATCTTGTTTAGCTTGATGATCACACATTGCACTTCTTTTGAATACTAGACGTGAAGGCTGTTGTTCTTTGATAGTTGCTGAGCATTAATTATGACCTTCTAACTTTCAAAGCCAAAAATTAAATTTTGTGGTGGTGATGCGAACAGGTAGCATTTAGGACAAAGGTCTTTCACCCAAACATTAACAGCAACGGAAGTATTTGCCTAGACATCTTGAAGGAACAATGGAGCCCCGCCCTTACCATTTCGAAGGTTTGTTGGACTATGCTTTGAAGAGCCTTTTATGTATTTTTGCACTAGAGTTTGCTGCATCTTCTTGTTAGAGGCAATAGATGCATGTCATACAATCCTACACAACGGATTCATGACATACTATCCTTGGCACAGTCGTATGATGTCTATAAAGATCAATTAATGGGTCTTGAGTCACTAAAGATGCGCGTGGGTCGGGCCCAAACTAGGCCCACTCTGCATTTTACCAGACCGAAAAGTTCAAAACATGGCCCAGGCCCGGCCAGGCTCACGGGCTGTTGTGCCTAAGCCTAATTTTACTAAATTTAGCGTGCTTTATTATGTCGTGTCGTGCTTTTCCCAAAAAAATGCGGCCCAGGACTTCGTGCTCCTGCTGGGCCGTGCTTTTTTAGTGCCCGTGCGAGGCCCAACCCGGCCCACGGCCATCTTTAGTCTTGACCTGAGCATATTATTATCATGTTGAATAGTTGTGCCGACCTAATCATTGGACAGTGTCATTGCTCGAGGGTGGAACTAATCTGTAGGAGTCTTCTCAAACGTTTAATTTTCGTTGTGATCAGGTGTTGCTTTCGATCTGCTCGCTGTTGACAGACCCAAATCCCGATGATCCCCTAGTGCCAGAAATCGCTCACATGTACAAGACTGATAGAGCAAAGTATGAGAGCACCGCAAGGAGCTGGACTCAGAAGTATGCTATGGGCTAAAAAGACTCTTAACATGGTCAAATTGAAAAGGGGTTAGGAGGCAGCTTTGTCATTCGGATATTACTGTCTTCTAATTCTAAGCTTTATGTAATGTGGGTTTTAACTACCTTTTGAACAGTGTGCTCTGCAATCTGCATCCTAAGCTGGACAAAAGTATTGTCTAGCATTTCATTATGTTCAAAAAAGAAACATTTATATGTTGTCCTTTAGAAATGTTTGTATGGACAAAACTTAATCTTCAAGCTGTGAAATATTACTGATTTGGTGCCCGATTCATTAGTGCTCTTACCTACCTTGAGAAACTACAGCTTCCCCCTCCCTCCTTCCCATGATTTTATGCATGCTTTGTAACAGTAGTACTGTTGGCGATGAGCAGTTTTGAGTACCCCTTGAAAGTCTGCTTTTCAATGGATGAAGTAGCTGTAAGTTTGATCTCCAATGGAAGAAGTAGCTTAACCGATATGCTATATGCGATACCCTTAACGGCTCGTTTGGTAACTGGTAATAATTGGTGGGAATGAGAATACATCCTAGTGTTATTTGGCAAGAAATTAAC

mRNA sequence

ATGGCGTCGAAAAGGATTTTGAAGGAGCTCAAGGATCTGCAGAAAGATCCTCCTACTTCCTGCAGTGCCGGTCCCGTGGGTGAAGACATGTTCCATTGGCAAGCAACCATTATGGGTCCTCCTGACAGTCCTTATGCAGGGGGTGTTTTCCTCGTCACTATTCATTTCCCCCCAGATTATCCATTTAAGCCCCCCAAGGTAGCATTTAGGACAAAGGTCTTTCACCCAAACATTAACAGCAACGGAAGTATTTGCCTAGACATCTTGAAGGAACAATGGAGCCCCGCCCTTACCATTTCGAAGGTGTTGCTTTCGATCTGCTCGCTGTTGACAGACCCAAATCCCGATGATCCCCTAGTGCCAGAAATCGCTCACATGTACAAGACTGATAGAGCAAAGTATGAGAGCACCGCAAGGAGCTGGACTCAGAAGTATGCTATGGGCTAAAAAGACTCTTAACATGGTCAAATTGAAAAGGGGTTAGGAGGCAGCTTTGTCATTCGGATATTACTGTCTTCTAATTCTAAGCTTTATGTAATGTGGGTTTTAACTACCTTTTGAACAGTGTGCTCTGCAATCTGCATCCTAAGCTGGACAAAAGTATTGTCTAGCATTTCATTATGTTCAAAAAAGAAACATTTATATGTTGTCCTTTAGAAATGTTTGTATGGACAAAACTTAATCTTCAAGCTGTGAAATATTACTGATTTGGTGCCCGATTCATTAGTGCTCTTACCTACCTTGAGAAACTACAGCTTCCCCCTCCCTCCTTCCCATGATTTTATGCATGCTTTGTAACAGTAGTACTGTTGGCGATGAGCAGTTTTGAGTACCCCTTGAAAGTCTGCTTTTCAATGGATGAAGTAGCTGTAAGTTTGATCTCCAATGGAAGAAGTAGCTTAACCGATATGCTATATGCGATACCCTTAACGGCTCGTTTGGTAACTGGTAATAATTGGTGGGAATGAGAATACATCCTAGTGTTATTTGGCAAGAAATTAAC

Coding sequence (CDS)

ATGGCGTCGAAAAGGATTTTGAAGGAGCTCAAGGATCTGCAGAAAGATCCTCCTACTTCCTGCAGTGCCGGTCCCGTGGGTGAAGACATGTTCCATTGGCAAGCAACCATTATGGGTCCTCCTGACAGTCCTTATGCAGGGGGTGTTTTCCTCGTCACTATTCATTTCCCCCCAGATTATCCATTTAAGCCCCCCAAGGTAGCATTTAGGACAAAGGTCTTTCACCCAAACATTAACAGCAACGGAAGTATTTGCCTAGACATCTTGAAGGAACAATGGAGCCCCGCCCTTACCATTTCGAAGGTGTTGCTTTCGATCTGCTCGCTGTTGACAGACCCAAATCCCGATGATCCCCTAGTGCCAGAAATCGCTCACATGTACAAGACTGATAGAGCAAAGTATGAGAGCACCGCAAGGAGCTGGACTCAGAAGTATGCTATGGGCTAA

Protein sequence

MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15984.1Spo15984.1mRNA


Homology
[Close]
BLAST of Spo15984.1 vs. NCBI nr
Match: gi|460405216|ref|XP_004248072.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum])

HSP 1 Score: 313.9 bits (803), Expect = 1.500e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. NCBI nr
Match: gi|698498119|ref|XP_009794984.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28 [Nicotiana sylvestris])

HSP 1 Score: 312.4 bits (799), Expect = 4.300e-82
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPY GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. NCBI nr
Match: gi|470133338|ref|XP_004302524.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28 [Fragaria vesca subsp. vesca])

HSP 1 Score: 311.6 bits (797), Expect = 7.300e-82
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. NCBI nr
Match: gi|698523354|ref|XP_009758483.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Nicotiana sylvestris])

HSP 1 Score: 311.2 bits (796), Expect = 9.500e-82
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPY GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. NCBI nr
Match: gi|697154868|ref|XP_009631671.1| (PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Nicotiana tomentosiformis])

HSP 1 Score: 311.2 bits (796), Expect = 9.500e-82
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVGEDMFHWQATIMGPPDSPY GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0Q9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_007910 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.000e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. UniProtKB/TrEMBL
Match: K4CYF2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.000e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CR80_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g052590 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.000e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. UniProtKB/TrEMBL
Match: M5WKF1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012933mg PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 5.100e-82
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NPP9_GOSAR (Ubiquitin-conjugating enzyme E2 28-like protein OS=Gossypium arboreum GN=F383_18368 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 8.700e-82
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKD+QKDPPTSCSAGPV EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDIQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.100e-82
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 2.500e-82
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. ExPASy Swiss-Prot
Match: UBC5B_ORYSJ (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica GN=UBC5B PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 7.300e-82
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQAT+MGP DSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVA +TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.200e-81
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP +SPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDRAKYE+TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.200e-81
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTD+ KYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. TAIR (Arabidopsis)
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10)

HSP 1 Score: 303.5 bits (776), Expect = 7.000e-83
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTD+ KYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. TAIR (Arabidopsis)
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9)

HSP 1 Score: 302.8 bits (774), Expect = 1.200e-82
Identity = 142/148 (95.95%), Postives = 145/148 (97.97%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTD+ KYESTAR+WTQKYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178
[Close]
BLAST of Spo15984.1 vs. TAIR (Arabidopsis)
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11)

HSP 1 Score: 301.2 bits (770), Expect = 3.500e-82
Identity = 139/148 (93.92%), Postives = 147/148 (99.32%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQKDPP++CSAGPV EDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAHMYKTDR+KYESTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148
[Close]
BLAST of Spo15984.1 vs. TAIR (Arabidopsis)
Match: AT5G41700.4 (ubiquitin conjugating enzyme 8)

HSP 1 Score: 296.6 bits (758), Expect = 8.600e-81
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCS-AGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPD 60
           MASKRILKELKDLQKDPPTSC  AGPV EDMFHWQATIMGP +SPY+GGVFLVTIHFPPD
Sbjct: 1   MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60

Query: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120
           YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL
Sbjct: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120

Query: 121 VPEIAHMYKTDRAKYESTARSWTQKYAMG 149
           VPEIAHMYKTDRAKYE+TAR+WTQKYAMG
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYAMG 149
[Close]
BLAST of Spo15984.1 vs. TAIR (Arabidopsis)
Match: AT5G56150.1 (ubiquitin-conjugating enzyme 30)

HSP 1 Score: 290.4 bits (742), Expect = 6.100e-79
Identity = 134/148 (90.54%), Postives = 142/148 (95.95%), Query Frame = 1 

		  

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
           MASKRI KEL+DLQ+DPP SCSAGP G+DMF WQATIMGP DSP+AGGVFLVTIHFPPDY
Sbjct: 1   MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 149
           PEIAH+YKTDR KYESTA+SWTQKYAMG
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAMG 148
The following BLAST results are available for this feature:
BLAST of Spo15984.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|460405216|ref|XP_004248072.1|1.5e-82100.PREDICTED: ubiquitin-conjugati... [more]
gi|698498119|ref|XP_009794984.1|4.3e-8299.3PREDICTED: ubiquitin-conjugati... [more]
gi|470133338|ref|XP_004302524.1|7.3e-8299.3PREDICTED: ubiquitin-conjugati... [more]
gi|698523354|ref|XP_009758483.1|9.5e-8298.6PREDICTED: ubiquitin-conjugati... [more]
gi|697154868|ref|XP_009631671.1|9.5e-8298.6PREDICTED: ubiquitin-conjugati... [more]
back to top
BLAST of Spo15984.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S0Q9_SPIOL1.0e-82100.Uncharacterized protein OS=Spi... [more]
K4CYF2_SOLLC1.0e-82100.Uncharacterized protein OS=Sol... [more]
A0A0J8CR80_BETVU1.0e-82100.Uncharacterized protein OS=Bet... [more]
M5WKF1_PRUPE5.1e-8299.3Uncharacterized protein OS=Pru... [more]
A0A0B0NPP9_GOSAR8.7e-8298.6Ubiquitin-conjugating enzyme E... [more]
back to top
BLAST of Spo15984.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
UBC28_ARATH1.1e-8297.3Ubiquitin-conjugating enzyme E... [more]
UBC4_SOLLC2.5e-8297.3Ubiquitin-conjugating enzyme E... [more]
UBC5B_ORYSJ7.3e-8296.6Ubiquitin-conjugating enzyme E... [more]
UBC8_ARATH1.2e-8195.9Ubiquitin-conjugating enzyme E... [more]
UBC10_ARATH1.2e-8196.6Ubiquitin-conjugating enzyme E... [more]
back to top
BLAST of Spo15984.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G53300.17.0e-8396.6ubiquitin-conjugating enzyme 1... [more]
AT4G27960.21.2e-8295.9ubiquitin conjugating enzyme 9[more]
AT3G08690.13.5e-8293.9ubiquitin-conjugating enzyme 1... [more]
AT5G41700.48.6e-8194.6ubiquitin conjugating enzyme 8[more]
AT5G56150.16.1e-7990.5ubiquitin-conjugating enzyme 3... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 5..141
score: 5.0
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 4..136
score: 49
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..147
score: 1.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 2..147
score: 1.79
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 74..89
scor
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..147
score: 9.3E
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..147
score: 1.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006869 lipid transport
biological_process GO:0016043 cellular component organization
biological_process GO:0048869 cellular developmental process
biological_process GO:0060560 developmental growth involved in morphogenesis
biological_process GO:0044238 primary metabolic process
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0010015 root morphogenesis
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0007034 vacuolar transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0016197 endosomal transport
biological_process GO:0007032 endosome organization
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0010351 lithium ion transport
biological_process GO:0009058 biosynthetic process
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0010091 trichome branching
biological_process GO:0007033 vacuole organization
biological_process GO:0006285 base-excision repair, AP site formation
biological_process GO:0000737 DNA catabolic process, endonucleolytic
biological_process GO:0006306 DNA methylation
biological_process GO:0006289 nucleotide-excision repair
biological_process GO:0016310 phosphorylation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0050794 regulation of cellular process
biological_process GO:0009733 response to auxin
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0016049 cell growth
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0010207 photosystem II assembly
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010200 response to chitin
biological_process GO:0009409 response to cold
biological_process GO:0006364 rRNA processing
biological_process GO:0009853 photorespiration
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0000165 MAPK cascade
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0050832 defense response to fungus
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0007165 signal transduction
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0009657 plastid organization
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0005634 nucleus
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0005771 multivesicular body
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0030904 retromer complex
cellular_component GO:0005622 intracellular
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0004518 nuclease activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0046983 protein dimerization activity
RNA-Seq Expression