Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGGCATTAGCATGCCTTTCATGTGGAATTCTTTTCTGAACGCGTGCAAAGATTCAAACGGGGTTGATGTTGGCCCGACTCAATTTGCAGACACTACCTTACACCTCAATTCCCAGAGTACCGTGGCCGTGCCTCCTTATCTGTATGATATAAATGCTACTAATGATGATGCGAGTTTGAAGAATGGGATTTCTCTGGCCCTTGAATTGGGTAGTTCATGTAGTTCTGTATGTGGAAAGACTGCCTTAACTTCTCGGGTAGATGTCGCAAAGGAGTCTCCAATCGATATCTGCCTCGATCTCAGCATTGATCTCGGAAATAAAATGGCGTGTAAGAACATGAAAAACTCTGGCACCGGGTTTGAAGCCCGTGGCAAAGAGAACCCTAAAGTTGATCTTGAGTTAAGTTTGTCTACTGGTGGAGTTGCTGCTGCTGAATCTGATCTCACAAGTATTACCCTAACTTCATCATCGCCTTTTCAGAATGTCACATCTGAATTTGAACAACTTGTGGATGAAGAAGGATCAACGTCGTCCAAATGGAAACAAGGACCCTTTGTGCCTCCTATAGACAGGTTTAATTGCAGCACAATTTCAGGTGTGTCAAAACAGCATCAGAAGAGCTCAGTTAAGACTTGCAGGTTTCCGGGTTGTCAGAAAGGAGCAAGAGGTGCTTCGGGTCATTGTATTTCACACGGAGGTGGACGGAGGTGTCAGAGAACGGGTTGTCAAAAAGGAGCAGAAGGAAAAACACCGTTCTGCAAAGCTCACGGTGGTGGCCGTAGGTGTGAACACTTGGGGTGCACCAAAAGTGCCGAAGGGCGGACCAGCTTTTGCATTGCTCATGGTGGAGGAAAGAGGTGTGGCTTTCACGGTGGTTGCAACCGCGCTGCTAGGGGTAAATCCGGCCTCTGCATCCGTCATGGTGGTGGAAAGAGGTGTAAGGTGGAAAACTGCACCAAGAGCGCGGAGGGGGTTGCCGGTCTATGCATAGCTCACGGTGGTGGTCGCCGGTGTGAATTTCCCGAGTGTACTAAAGGCGCTCAGGGGGGAACGAAACTTTGCAAGGCTCACGGTGGAGGAAAACGGTGCACCTTTATGGGATGCACCAAGGGAGCCGAAGGAAGTACATCTTTTTGTAAAGGACATGGTGGCGGGAAACGGTGTTCGTTTCAAGAAAACGGTGTTGCATGCTCCAAGAGTGTACATGGCGGTACGTTGTACTGTGTTTCCCACGGCGGTGGAAAGAGATGTGCGGTCGTTGAATGTACTAAAAGTGCGAGAGGACGGACAAACTTCTGTGTCCGCCATGGCGGAGGAAAGAGGTGTAAGTTCGAAGGATGTGAAAAGAGTGCGCAGGGAAGTACCGACTTCTGTAAAGCGCATGGTGGGGGGAAACGGTGTTTGTGGGGCCAACAAGGTTCTGGATTCGGTGAGAATGGTGGTGATACTGATAGAGTTTGTGATAAGTTTGCAAGGGGTAAGATTGGTCTTTGCGCTGCTCATGGTGCGCAGGTTGAAGATAAGCGAGTTCATGGTGATGGTACCGTGGGTCTGAAGCTGAAAGGGGTTGATGCTGGGAACGTGTTTCAGTGCTCGAATAATGTTGGTGCAGAAGAAAGCGCGACTGTTTGGAATGGTTTCAATTTGCAGATGCTGCCTGATAGCGCGTCCTTGTTGGGTGAATCATCGAATTCAGCGTCCCTTGAAGGACGGGTGCATGGTGGTGGTCTTATGGCTATGCTGAGCCAGTTCTGA ATGGACGGCATTAGCATGCCTTTCATGTGGAATTCTTTTCTGAACGCGTGCAAAGATTCAAACGGGGTTGATGTTGGCCCGACTCAATTTGCAGACACTACCTTACACCTCAATTCCCAGAGTACCGTGGCCGTGCCTCCTTATCTGTATGATATAAATGCTACTAATGATGATGCGAGTTTGAAGAATGGGATTTCTCTGGCCCTTGAATTGGGTAGTTCATGTAGTTCTGTATGTGGAAAGACTGCCTTAACTTCTCGGGTAGATGTCGCAAAGGAGTCTCCAATCGATATCTGCCTCGATCTCAGCATTGATCTCGGAAATAAAATGGCGTGTAAGAACATGAAAAACTCTGGCACCGGGTTTGAAGCCCGTGGCAAAGAGAACCCTAAAGTTGATCTTGAGTTAAGTTTGTCTACTGGTGGAGTTGCTGCTGCTGAATCTGATCTCACAAGTATTACCCTAACTTCATCATCGCCTTTTCAGAATGTCACATCTGAATTTGAACAACTTGTGGATGAAGAAGGATCAACGTCGTCCAAATGGAAACAAGGACCCTTTGTGCCTCCTATAGACAGGTTTAATTGCAGCACAATTTCAGGTGTGTCAAAACAGCATCAGAAGAGCTCAGTTAAGACTTGCAGGTTTCCGGGTTGTCAGAAAGGAGCAAGAGGTGCTTCGGGTCATTGTATTTCACACGGAGGTGGACGGAGGTGTCAGAGAACGGGTTGTCAAAAAGGAGCAGAAGGAAAAACACCGTTCTGCAAAGCTCACGGTGGTGGCCGTAGGTGTGAACACTTGGGGTGCACCAAAAGTGCCGAAGGGCGGACCAGCTTTTGCATTGCTCATGGTGGAGGAAAGAGGTGTGGCTTTCACGGTGGTTGCAACCGCGCTGCTAGGGGTAAATCCGGCCTCTGCATCCGTCATGGTGGTGGAAAGAGGTGTAAGGTGGAAAACTGCACCAAGAGCGCGGAGGGGGTTGCCGGTCTATGCATAGCTCACGGTGGTGGTCGCCGGTGTGAATTTCCCGAGTGTACTAAAGGCGCTCAGGGGGGAACGAAACTTTGCAAGGCTCACGGTGGAGGAAAACGGTGCACCTTTATGGGATGCACCAAGGGAGCCGAAGGAAGTACATCTTTTTGTAAAGGACATGGTGGCGGGAAACGGTGTTCGTTTCAAGAAAACGGTGTTGCATGCTCCAAGAGTGTACATGGCGGTACGTTGTACTGTGTTTCCCACGGCGGTGGAAAGAGATGTGCGGTCGTTGAATGTACTAAAAGTGCGAGAGGACGGACAAACTTCTGTGTCCGCCATGGCGGAGGAAAGAGGTGTAAGTTCGAAGGATGTGAAAAGAGTGCGCAGGGAAGTACCGACTTCTGTAAAGCGCATGGTGGGGGGAAACGGTGTTTGTGGGGCCAACAAGGTTCTGGATTCGGTGAGAATGGTGGTGATACTGATAGAGTTTGTGATAAGTTTGCAAGGGGTAAGATTGGTCTTTGCGCTGCTCATGGTGCGCAGGTTGAAGATAAGCGAGTTCATGGTGATGGTACCGTGGGTCTGAAGCTGAAAGGGGTTGATGCTGGGAACGTGTTTCAGTGCTCGAATAATGTTGGTGCAGAAGAAAGCGCGACTGTTTGGAATGGTTTCAATTTGCAGATGCTGCCTGATAGCGCGTCCTTGTTGGGTGAATCATCGAATTCAGCGTCCCTTGAAGGACGGGTGCATGGTGGTGGTCTTATGGCTATGCTGAGCCAGTTCTGA ATGGACGGCATTAGCATGCCTTTCATGTGGAATTCTTTTCTGAACGCGTGCAAAGATTCAAACGGGGTTGATGTTGGCCCGACTCAATTTGCAGACACTACCTTACACCTCAATTCCCAGAGTACCGTGGCCGTGCCTCCTTATCTGTATGATATAAATGCTACTAATGATGATGCGAGTTTGAAGAATGGGATTTCTCTGGCCCTTGAATTGGGTAGTTCATGTAGTTCTGTATGTGGAAAGACTGCCTTAACTTCTCGGGTAGATGTCGCAAAGGAGTCTCCAATCGATATCTGCCTCGATCTCAGCATTGATCTCGGAAATAAAATGGCGTGTAAGAACATGAAAAACTCTGGCACCGGGTTTGAAGCCCGTGGCAAAGAGAACCCTAAAGTTGATCTTGAGTTAAGTTTGTCTACTGGTGGAGTTGCTGCTGCTGAATCTGATCTCACAAGTATTACCCTAACTTCATCATCGCCTTTTCAGAATGTCACATCTGAATTTGAACAACTTGTGGATGAAGAAGGATCAACGTCGTCCAAATGGAAACAAGGACCCTTTGTGCCTCCTATAGACAGGTTTAATTGCAGCACAATTTCAGGTGTGTCAAAACAGCATCAGAAGAGCTCAGTTAAGACTTGCAGGTTTCCGGGTTGTCAGAAAGGAGCAAGAGGTGCTTCGGGTCATTGTATTTCACACGGAGGTGGACGGAGGTGTCAGAGAACGGGTTGTCAAAAAGGAGCAGAAGGAAAAACACCGTTCTGCAAAGCTCACGGTGGTGGCCGTAGGTGTGAACACTTGGGGTGCACCAAAAGTGCCGAAGGGCGGACCAGCTTTTGCATTGCTCATGGTGGAGGAAAGAGGTGTGGCTTTCACGGTGGTTGCAACCGCGCTGCTAGGGGTAAATCCGGCCTCTGCATCCGTCATGGTGGTGGAAAGAGGTGTAAGGTGGAAAACTGCACCAAGAGCGCGGAGGGGGTTGCCGGTCTATGCATAGCTCACGGTGGTGGTCGCCGGTGTGAATTTCCCGAGTGTACTAAAGGCGCTCAGGGGGGAACGAAACTTTGCAAGGCTCACGGTGGAGGAAAACGGTGCACCTTTATGGGATGCACCAAGGGAGCCGAAGGAAGTACATCTTTTTGTAAAGGACATGGTGGCGGGAAACGGTGTTCGTTTCAAGAAAACGGTGTTGCATGCTCCAAGAGTGTACATGGCGGTACGTTGTACTGTGTTTCCCACGGCGGTGGAAAGAGATGTGCGGTCGTTGAATGTACTAAAAGTGCGAGAGGACGGACAAACTTCTGTGTCCGCCATGGCGGAGGAAAGAGGTGTAAGTTCGAAGGATGTGAAAAGAGTGCGCAGGGAAGTACCGACTTCTGTAAAGCGCATGGTGGGGGGAAACGGTGTTTGTGGGGCCAACAAGGTTCTGGATTCGGTGAGAATGGTGGTGATACTGATAGAGTTTGTGATAAGTTTGCAAGGGGTAAGATTGGTCTTTGCGCTGCTCATGGTGCGCAGGTTGAAGATAAGCGAGTTCATGGTGATGGTACCGTGGGTCTGAAGCTGAAAGGGGTTGATGCTGGGAACGTGTTTCAGTGCTCGAATAATGTTGGTGCAGAAGAAAGCGCGACTGTTTGGAATGGTTTCAATTTGCAGATGCTGCCTGATAGCGCGTCCTTGTTGGGTGAATCATCGAATTCAGCGTCCCTTGAAGGACGGGTGCATGGTGGTGGTCTTATGGCTATGCTGAGCCAGTTCTGA MDGISMPFMWNSFLNACKDSNGVDVGPTQFADTTLHLNSQSTVAVPPYLYDINATNDDASLKNGISLALELGSSCSSVCGKTALTSRVDVAKESPIDICLDLSIDLGNKMACKNMKNSGTGFEARGKENPKVDLELSLSTGGVAAAESDLTSITLTSSSPFQNVTSEFEQLVDEEGSTSSKWKQGPFVPPIDRFNCSTISGVSKQHQKSSVKTCRFPGCQKGARGASGHCISHGGGRRCQRTGCQKGAEGKTPFCKAHGGGRRCEHLGCTKSAEGRTSFCIAHGGGKRCGFHGGCNRAARGKSGLCIRHGGGKRCKVENCTKSAEGVAGLCIAHGGGRRCEFPECTKGAQGGTKLCKAHGGGKRCTFMGCTKGAEGSTSFCKGHGGGKRCSFQENGVACSKSVHGGTLYCVSHGGGKRCAVVECTKSARGRTNFCVRHGGGKRCKFEGCEKSAQGSTDFCKAHGGGKRCLWGQQGSGFGENGGDTDRVCDKFARGKIGLCAAHGAQVEDKRVHGDGTVGLKLKGVDAGNVFQCSNNVGAEESATVWNGFNLQMLPDSASLLGESSNSASLEGRVHGGGLMAMLSQF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16015.1 vs. NCBI nr
Match: gi|902203561|gb|KNA14593.1| (hypothetical protein SOVF_105970 [Spinacia oleracea]) HSP 1 Score: 1206.0 bits (3119), Expect = 0.000e+0 Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 1
BLAST of Spo16015.1 vs. NCBI nr
Match: gi|731321831|ref|XP_010671562.1| (PREDICTED: uncharacterized protein LOC104888325 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 853.2 bits (2203), Expect = 2.700e-244 Identity = 441/622 (70.90%), Postives = 491/622 (78.94%), Query Frame = 1
BLAST of Spo16015.1 vs. NCBI nr
Match: gi|661891232|emb|CDP05114.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 579.7 bits (1493), Expect = 5.700e-162 Identity = 335/611 (54.83%), Postives = 389/611 (63.67%), Query Frame = 1
BLAST of Spo16015.1 vs. NCBI nr
Match: gi|359490558|ref|XP_003634111.1| (PREDICTED: uncharacterized protein LOC100241527 [Vitis vinifera]) HSP 1 Score: 574.7 bits (1480), Expect = 1.800e-160 Identity = 349/662 (52.72%), Postives = 405/662 (61.18%), Query Frame = 1
BLAST of Spo16015.1 vs. NCBI nr
Match: gi|460400065|ref|XP_004245556.1| (PREDICTED: uncharacterized protein LOC101268782 [Solanum lycopersicum]) HSP 1 Score: 570.5 bits (1469), Expect = 3.500e-159 Identity = 336/633 (53.08%), Postives = 410/633 (64.77%), Query Frame = 1
BLAST of Spo16015.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R504_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_105970 PE=4 SV=1) HSP 1 Score: 1206.0 bits (3119), Expect = 0.000e+0 Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 1
BLAST of Spo16015.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRA3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g052840 PE=4 SV=1) HSP 1 Score: 853.2 bits (2203), Expect = 1.900e-244 Identity = 441/622 (70.90%), Postives = 491/622 (78.94%), Query Frame = 1
BLAST of Spo16015.1 vs. UniProtKB/TrEMBL
Match: G5DW36_SILLA (Putative uncharacterized protein (Fragment) OS=Silene latifolia PE=2 SV=1) HSP 1 Score: 582.0 bits (1499), Expect = 8.000e-163 Identity = 324/529 (61.25%), Postives = 366/529 (69.19%), Query Frame = 1
BLAST of Spo16015.1 vs. UniProtKB/TrEMBL
Match: A0A068UA92_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020053001 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 4.000e-162 Identity = 335/611 (54.83%), Postives = 389/611 (63.67%), Query Frame = 1
BLAST of Spo16015.1 vs. UniProtKB/TrEMBL
Match: G5DW37_SILLA (Putative uncharacterized protein (Fragment) OS=Silene latifolia PE=2 SV=1) HSP 1 Score: 578.6 bits (1490), Expect = 8.800e-162 Identity = 323/529 (61.06%), Postives = 365/529 (69.00%), Query Frame = 1
BLAST of Spo16015.1 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 6.900e-67 Identity = 140/291 (48.11%), Postives = 176/291 (60.48%), Query Frame = 1
BLAST of Spo16015.1 vs. TAIR (Arabidopsis)
Match: AT1G64140.1 (BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1)) HSP 1 Score: 490.3 bits (1261), Expect = 1.600e-138 Identity = 259/412 (62.86%), Postives = 294/412 (71.36%), Query Frame = 1
BLAST of Spo16015.1 vs. TAIR (Arabidopsis)
Match: AT5G64550.1 (loricrin-related) HSP 1 Score: 473.8 bits (1218), Expect = 1.600e-133 Identity = 223/329 (67.78%), Postives = 254/329 (77.20%), Query Frame = 1
BLAST of Spo16015.1 vs. TAIR (Arabidopsis)
Match: AT5G09670.2 (loricrin-related) HSP 1 Score: 451.4 bits (1160), Expect = 8.300e-127 Identity = 257/521 (49.33%), Postives = 313/521 (60.08%), Query Frame = 1
BLAST of Spo16015.1 vs. TAIR (Arabidopsis)
Match: AT4G12020.2 (protein kinase family protein) HSP 1 Score: 256.5 bits (654), Expect = 3.900e-68 Identity = 140/291 (48.11%), Postives = 176/291 (60.48%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16015.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16015.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16015.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo16015.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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