Spo16080 (gene) | SpinachBase

Overview


Name	Spo16080
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Profilin
Location	chr1 : 36055098 .. 36057748 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAACTGTAACTCCTTTTTCCCAATCGAAGAAAAACAACGCCAAAAATGTCGTGGCAAACTTACGTCGATGACCACTTGTTGTGCGAGATCGAAGAGACCGGCAACCACCTCACCGCCGCCGCTATCCTCGGCGTCGACGGCAGCGTCTGGGCTCAGAGTGCCAGTTTTCCCCAGGTACTTTTTCTTCATTTATCTATTTTGTATTGGATTTTCGGGGAATTTTACAAGCTTTATAGATCTTATTGATGTTTAATTTCATGTGGGTATGATTGATTTTGCCTGATCTGATGTTTTAATCATATGGGTATTTCTGGTCTCATCGTTTCCTTTGATTGGTAGATTTCAATTTTTTGATTATTTCAGTCTATTTCAATTTTTGATTCGATCTTTGGCTGTTATTCTTTGATTAAGCTGAATTGTGTGTTGATTTTAAGATTCAAGTGGATGGTTGTGGAATTTGACAATTGGACCTAAATTTTGCAATCACTTTAACTGATTTATCAGAAAAATTGTGTGATTTTTAGGAGTCGATAAAATGATGAGATCTTGTCAGTTGTCACTGGTTTTACTGATTTATCTAGCTATTGTACTGATATGTATGAAGGCTTAATCGTGTATTTGGTTTGTCTTTCGCGATGCTACAGTTCAAGCCAGAAGAAATAGCTGCTATTGTGAAGGATTTTGATGAGCCTGGAAGCCTTGCTCCCACCGGGCTGTTCCTTGGCGGTATCAAGTACATGGTTATTCAAGGTGAACCCGGGGCTGTTATTCGTGGCAAGAAGGTAAAGATTGATTGTTTTCGATGAAAAATATAGACCTCATGCTATGTCATGGTGAATTGGTGATGGCTTTCCCTTGTTTAGGTATATGTATGGCTTCATTGGTGAGAAGCAAATGGCAAGAAAATGTTTGTTATGTATGGATGTAGTCCTGTACTCCTGTGTGAGCCATATATTAGGTTGTTGCATTCTCTTGTGCCGAGTCCCTGCATGCGTCTTATTGGATTCGGCATCTGTTAAAATATTGTCCTGTTCTGTTCTGTCTTTCCTTTGCTGAGCCAGTTCCGGTGCTTTTAAGAAAATTCTGACCCATGTTTAGAATGATACTTTGAATGGAAGAGGCTTCTTATGGTTTAGAGGGTTTGGTTTCAATGCGAAGTATCAAGGTAGTCGTCTTGTATGGTCATTTTGGTGTATTGTATTTCTTTAACTGTGATCACGTTTGGTGGGTGTTTTTATAGTTCAATGTTTAAAACTTGGACCAGTCAATCTTTATATACTAAAATTGTGAATGCGGTCTGAGAAGCCCTTCCTTCAGCCTCAGCGTATAGACAAAGTCGATAAACAATGTTTCCAGTTTCGAGTCCTTCACCATGTGGTGCACTGCTTTCCTCAGTCAAGGTTTTTTTTGTGGTCACTATGTGCTAATCAACCACACATCAACACAGTGATATCCTGTTTTTCCTTTTAACTCGTTTATTTCTTGATATTAGAATAGAAGGAATCATCAATTTGTTGGAATGGTACTTCAGTTTTAAGTTGCATCATTGTTATGCTGGTACTTACTGTTTCTTTTTCATATTATTTTCAGGGTGCTGGTGGCATTTGTGTGAAGAAGACCGCGCAAGCCTTGGTTATCGGTATATACGATGAGCCTGTGACTCCTGGTCAGTGCAACATCATTGTTGAAAAGCTGGGTGATTATCTCATTGAGCAGGGTCTCTAAATAGCTTGGTAAGTTCAGTCCTTGTTGCTTCAAAATTTGCTCACTTTTCTATGTTGTATTTACCGCTGAATAAAATGTGAAAAGACGAGGCTTCAATTACCCTTTTATTGAAAACACTCCCTTCTCTCCAATATAGAGTTCCTTATCATCAAATCAAATCAAATCAAATCAGAGCGTTTCAAAAAGAAATCTCTCCTTTATATTCAAGTAAAAGACTATAATTTACAAATTATTTCCCACTTTTCTCCATCACATCTCACTCTTTTACTTTCTCTCTTCACTCACTTCAATAATTTTTACGTCAATACTCTTTATAATCATGTCAAAGTAACATTGAACTTCTTTGTGAAATATTGCAAGTACCTACATAAAACTAACATAATAAACTCCGTGATATCTCATTGTTCTGCTTACTAAATGGGGTATAAATTTTCCGTGTAGGTTAATATTTACATATTTGATGTACACAAAGGAGCTTGGTGTGGATTTGCTGCTCTATAAAGTGGGGATTGGCTTTCTATTGTGAACTTTTAGCCTTTGTTCCTTTTCCCTTAAAAGGGGGTTGTGTTAAATTTTTCTGGCATCAGATGAGAAGCTTTTTGATGTATTTTGTATGAATTGTTTGCTTTAATCTTGGAGATAGTTGATCCATACAGCGGCTTATGTTTTCAAATATGGAATAATATTTCTGCAAATGGCATCTATTTAAGCGGGCTATTAAGCCCGGTCAATACTTTCATAGGGGAAGAATGGTAACGAGGAGCTCCTAATGAAAAATAGACTCTTCAAATGATTTGAGGAGAACTTTGTAGTTTGTATGAAGGAGTGATTATAATGTTTTCATGAGTATGACTCAAAGGTGGAAGTGTGATAATTCTGAAGGAGGTTAATATTCATGATTATTGATTAGTTGTCATTTGATAA

mRNA sequence

AACAACTGTAACTCCTTTTTCCCAATCGAAGAAAAACAACGCCAAAAATGTCGTGGCAAACTTACGTCGATGACCACTTGTTGTGCGAGATCGAAGAGACCGGCAACCACCTCACCGCCGCCGCTATCCTCGGCGTCGACGGCAGCGTCTGGGCTCAGAGTGCCAGTTTTCCCCAGTTCAAGCCAGAAGAAATAGCTGCTATTGTGAAGGATTTTGATGAGCCTGGAAGCCTTGCTCCCACCGGGCTGTTCCTTGGCGGTATCAAGTACATGGTTATTCAAGGTGAACCCGGGGCTGTTATTCGTGGCAAGAAGGGTGCTGGTGGCATTTGTGTGAAGAAGACCGCGCAAGCCTTGGTTATCGGTATATACGATGAGCCTGTGACTCCTGGTCAGTGCAACATCATTGTTGAAAAGCTGGGTGATTATCTCATTGAGCAGGGTCTCTAAATAGCTTGGTTAATATTTACATATTTGATGTACACAAAGGAGCTTGGTGTGGATTTGCTGCTCTATAAAGTGGGGATTGGCTTTCTATTGTGAACTTTTAGCCTTTGTTCCTTTTCCCTTAAAAGGGGGTTGTGTTAAATTTTTCTGGCATCAGATGAGAAGCTTTTTGATGTATTTTGTATGAATTGTTTGCTTTAATCTTGGAGATAGTTGATCCATACAGCGGCTTATGTTTTCAAATATGGAATAATATTTCTGCAAATGGCATCTATTTAAGCGGGCTATTAAGCCCGGTCAATACTTTCATAGGGGAAGAATGGTAACGAGGAGCTCCTAATGAAAAATAGACTCTTCAAATGATTTGAGGAGAACTTTGTAGTTTGTATGAAGGAGTGATTATAATGTTTTCATGAGTATGACTCAAAGGTGGAAGTGTGATAATTCTGAAGGAGGTTAATATTCATGATTATTGATTAGTTGTCATTTGATAA

Coding sequence (CDS)

ATGTCGTGGCAAACTTACGTCGATGACCACTTGTTGTGCGAGATCGAAGAGACCGGCAACCACCTCACCGCCGCCGCTATCCTCGGCGTCGACGGCAGCGTCTGGGCTCAGAGTGCCAGTTTTCCCCAGTTCAAGCCAGAAGAAATAGCTGCTATTGTGAAGGATTTTGATGAGCCTGGAAGCCTTGCTCCCACCGGGCTGTTCCTTGGCGGTATCAAGTACATGGTTATTCAAGGTGAACCCGGGGCTGTTATTCGTGGCAAGAAGGGTGCTGGTGGCATTTGTGTGAAGAAGACCGCGCAAGCCTTGGTTATCGGTATATACGATGAGCCTGTGACTCCTGGTCAGTGCAACATCATTGTTGAAAAGCTGGGTGATTATCTCATTGAGCAGGGTCTCTAA

Protein sequence

MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPGSLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNIIVEKLGDYLIEQGL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16080.1	Spo16080.1	mRNA

Homology

[Close]

BLAST of Spo16080.1 vs. NCBI nr
Match: gi|902171308|gb|KNA07985.1| (hypothetical protein SOVF_166810 [Spinacia oleracea])

HSP 1 Score: 276.9 bits (707), Expect = 1.800e-71
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG
Sbjct: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII
Sbjct: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120

Query: 121 VEKLGDYLIEQGL 134
           VEKLGDYLIEQGL
Sbjct: 121 VEKLGDYLIEQGL 133

[Close]

BLAST of Spo16080.1 vs. NCBI nr
Match: gi|731317399|ref|XP_010668774.1| (PREDICTED: profilin-3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 257.3 bits (656), Expect = 1.500e-65
Identity = 120/133 (90.23%), Postives = 128/133 (96.24%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVD+HL+CEIE T NHL+AAAILG+DGSVWAQS+SFPQFKPEEIAAIVKDFDEPG
Sbjct: 1   MSWQTYVDEHLMCEIEGTANHLSAAAILGLDGSVWAQSSSFPQFKPEEIAAIVKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           SLAPTGLFLGG KYMVIQGEPGAVIRGKKG GGICVKKT QALVIG+YDEPVTPGQCN+I
Sbjct: 61  SLAPTGLFLGGTKYMVIQGEPGAVIRGKKGPGGICVKKTGQALVIGLYDEPVTPGQCNMI 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYLIEQGL
Sbjct: 121 VERLGDYLIEQGL 133

[Close]

BLAST of Spo16080.1 vs. NCBI nr
Match: gi|902140200|gb|KNA04623.1| (hypothetical protein SOVF_198000 [Spinacia oleracea])

HSP 1 Score: 255.8 bits (652), Expect = 4.300e-65
Identity = 118/133 (88.72%), Postives = 128/133 (96.24%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVDDHL+CEIE T NHL AAAILG DGSVWAQSASFPQFKP+EIAA+VKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCEIEGTTNHLAAAAILGTDGSVWAQSASFPQFKPDEIAAVVKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           +LAPTGL LGG+KYMVIQGEPGAVIRGKKG+GGICVKKTAQALVIG+YDEPVTPGQCN+I
Sbjct: 61  TLAPTGLHLGGVKYMVIQGEPGAVIRGKKGSGGICVKKTAQALVIGLYDEPVTPGQCNMI 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYLI+QGL
Sbjct: 121 VERLGDYLIDQGL 133

[Close]

BLAST of Spo16080.1 vs. NCBI nr
Match: gi|731317401|ref|XP_010668781.1| (PREDICTED: profilin-3-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 251.9 bits (642), Expect = 6.200e-64
Identity = 115/133 (86.47%), Postives = 127/133 (95.49%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVD+HL+CEIE T NHLTAAAILG+DGSVWAQS++FPQFKP+EIAA+VKDFDEPG
Sbjct: 1   MSWQTYVDEHLMCEIEGTNNHLTAAAILGIDGSVWAQSSAFPQFKPDEIAAVVKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           +LAPTGL LGG KYMVIQGEPGAVIRGKKG GGICVKKT QALVIG+YDEPVTPGQCN+I
Sbjct: 61  TLAPTGLHLGGTKYMVIQGEPGAVIRGKKGPGGICVKKTGQALVIGLYDEPVTPGQCNMI 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYLI+QGL
Sbjct: 121 VERLGDYLIDQGL 133

[Close]

BLAST of Spo16080.1 vs. NCBI nr
Match: gi|625293889|gb|AHY24177.1| (profilin, partial [Prosopis juliflora])

HSP 1 Score: 249.2 bits (635), Expect = 4.000e-63
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVDDHL+CEIE T NHL+AAAILGVDGSVWAQSASFPQFKP+EI+A+VKDFD PG
Sbjct: 1   MSWQTYVDDHLMCEIEGTNNHLSAAAILGVDGSVWAQSASFPQFKPDEISAVVKDFDGPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           +LAPTGL LGG KYMVIQGEPG VIRGKKG GGICVKKT QAL+IGIYDEPVTPGQCN+I
Sbjct: 61  TLAPTGLHLGGTKYMVIQGEPGQVIRGKKGPGGICVKKTGQALIIGIYDEPVTPGQCNMI 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYL+EQG+
Sbjct: 121 VERLGDYLVEQGM 133

[Close]

BLAST of Spo16080.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QL47_SPIOL (Profilin OS=Spinacia oleracea GN=SOVF_166810 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.200e-71
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG
Sbjct: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII
Sbjct: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120

Query: 121 VEKLGDYLIEQGL 134
           VEKLGDYLIEQGL
Sbjct: 121 VEKLGDYLIEQGL 133

[Close]

BLAST of Spo16080.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FQN7_BETVU (Profilin OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g032850 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.000e-65
Identity = 120/133 (90.23%), Postives = 128/133 (96.24%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVD+HL+CEIE T NHL+AAAILG+DGSVWAQS+SFPQFKPEEIAAIVKDFDEPG
Sbjct: 1   MSWQTYVDEHLMCEIEGTANHLSAAAILGLDGSVWAQSSSFPQFKPEEIAAIVKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           SLAPTGLFLGG KYMVIQGEPGAVIRGKKG GGICVKKT QALVIG+YDEPVTPGQCN+I
Sbjct: 61  SLAPTGLFLGGTKYMVIQGEPGAVIRGKKGPGGICVKKTGQALVIGLYDEPVTPGQCNMI 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYLIEQGL
Sbjct: 121 VERLGDYLIEQGL 133

[Close]

BLAST of Spo16080.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QD73_SPIOL (Profilin OS=Spinacia oleracea GN=SOVF_198000 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.000e-65
Identity = 118/133 (88.72%), Postives = 128/133 (96.24%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVDDHL+CEIE T NHL AAAILG DGSVWAQSASFPQFKP+EIAA+VKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCEIEGTTNHLAAAAILGTDGSVWAQSASFPQFKPDEIAAVVKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           +LAPTGL LGG+KYMVIQGEPGAVIRGKKG+GGICVKKTAQALVIG+YDEPVTPGQCN+I
Sbjct: 61  TLAPTGLHLGGVKYMVIQGEPGAVIRGKKGSGGICVKKTAQALVIGLYDEPVTPGQCNMI 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYLI+QGL
Sbjct: 121 VERLGDYLIDQGL 133

[Close]

BLAST of Spo16080.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CWW8_BETVU (Profilin OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g032860 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.300e-64
Identity = 115/133 (86.47%), Postives = 127/133 (95.49%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVD+HL+CEIE T NHLTAAAILG+DGSVWAQS++FPQFKP+EIAA+VKDFDEPG
Sbjct: 1   MSWQTYVDEHLMCEIEGTNNHLTAAAILGIDGSVWAQSSAFPQFKPDEIAAVVKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           +LAPTGL LGG KYMVIQGEPGAVIRGKKG GGICVKKT QALVIG+YDEPVTPGQCN+I
Sbjct: 61  TLAPTGLHLGGTKYMVIQGEPGAVIRGKKGPGGICVKKTGQALVIGLYDEPVTPGQCNMI 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYLI+QGL
Sbjct: 121 VERLGDYLIDQGL 133

[Close]

BLAST of Spo16080.1 vs. UniProtKB/TrEMBL
Match: C3W2Q7_AMARE (Profilin (Fragment) OS=Amaranthus retroflexus PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.800e-63
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQ YVDDHL+CEIE T NHLT AAILG+DGSVWAQSA FPQFKP+EIAAIV+DFDEPG
Sbjct: 1   MSWQAYVDDHLMCEIEGTTNHLTGAAILGLDGSVWAQSADFPQFKPDEIAAIVEDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           +LAPTGL LGG KYMVIQGEPGAVIRGKKGAGGICVKKT QALV+GIYDEPVTPGQCN+I
Sbjct: 61  TLAPTGLHLGGTKYMVIQGEPGAVIRGKKGAGGICVKKTGQALVMGIYDEPVTPGQCNMI 120

Query: 121 VEKLGDYLIEQG 133
           VE+LGDYLIEQG
Sbjct: 121 VERLGDYLIEQG 132

[Close]

BLAST of Spo16080.1 vs. ExPASy Swiss-Prot
Match: PROCF_OLEEU (Profilin-4 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.300e-63
Identity = 113/133 (84.96%), Postives = 124/133 (93.23%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVDDHL+C+IE  G HLTAAA++G DGSVWAQSA+FPQFKPEE+AAI+KDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIE--GQHLTAAAVIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           SLAPTGL LGG KYMVIQGEPGAVIRGKKGAGGI VKKT QAL+ GIYDEP+TPGQCNII
Sbjct: 61  SLAPTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNII 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYL+EQGL
Sbjct: 121 VERLGDYLLEQGL 131

[Close]

BLAST of Spo16080.1 vs. ExPASy Swiss-Prot
Match: PROCH_OLEEU (Profilin-4 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.000e-62
Identity = 112/132 (84.85%), Postives = 122/132 (92.42%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQ YVDDHL+C+IE  G HLTAAAI+G DGSVWAQSA+FPQFKPEE+AAI+KDFDEPG
Sbjct: 1   MSWQAYVDDHLMCDIE--GQHLTAAAIIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           SLAPTGL LGG KYMVIQGEPGAVIRGKKGAGGI VKKT QAL+ GIYDEP+TPGQCNII
Sbjct: 61  SLAPTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNII 120

Query: 121 VEKLGDYLIEQG 133
           VE+LGDYL+EQG
Sbjct: 121 VERLGDYLLEQG 130

[Close]

BLAST of Spo16080.1 vs. ExPASy Swiss-Prot
Match: PROF3_MALDO (Profilin-3 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.600e-62
Identity = 112/133 (84.21%), Postives = 125/133 (93.98%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQ YVDDHL+C+I+  GN LTAAAILG DGSVW+QSASFP FKPEEIAAI+KDFD+PG
Sbjct: 1   MSWQAYVDDHLMCDID--GNRLTAAAILGQDGSVWSQSASFPAFKPEEIAAILKDFDQPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           +LAPTGLFLGG KYMVIQGEPGAVIRGKKG+GGI +KKT+QAL+IGIYDEPVTPGQCNI+
Sbjct: 61  TLAPTGLFLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTSQALLIGIYDEPVTPGQCNIV 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYLIEQGL
Sbjct: 121 VERLGDYLIEQGL 131

[Close]

BLAST of Spo16080.1 vs. ExPASy Swiss-Prot
Match: PROCD_OLEEU (Profilin-4 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.600e-62
Identity = 112/133 (84.21%), Postives = 123/133 (92.48%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSW TYVDDHL+C+IE  G HLTAAAI+G DGSVWAQSA+FPQFKPEE+AAI+KDFDEPG
Sbjct: 1   MSWPTYVDDHLMCDIE--GQHLTAAAIIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           SLAPTGL LGG KYMVI+GEPGAVIRGKKGAGGI VKKT QAL+ GIYDEP+TPGQCNII
Sbjct: 61  SLAPTGLHLGGTKYMVIRGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNII 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYL+EQGL
Sbjct: 121 VERLGDYLLEQGL 131

[Close]

BLAST of Spo16080.1 vs. ExPASy Swiss-Prot
Match: PROF3_HEVBR (Profilin-3 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 4.400e-62
Identity = 110/133 (82.71%), Postives = 126/133 (94.74%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVD+HL+C+I+  G+HLTAAAI+G DGSVWAQS+SFPQFKPEE+AAI+KDFDEPG
Sbjct: 1   MSWQTYVDEHLMCDID--GHHLTAAAIIGHDGSVWAQSSSFPQFKPEEVAAIMKDFDEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           SLAPTGL LGG KYMVIQGEPGAVIRGKKG+GGI VKKT QAL+IGIYDEP+TPGQCN+I
Sbjct: 61  SLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMI 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYL+EQG+
Sbjct: 121 VERLGDYLLEQGM 131

[Close]

BLAST of Spo16080.1 vs. TAIR (Arabidopsis)
Match: AT2G19770.1 (profilin 5)

HSP 1 Score: 225.3 bits (573), Expect = 2.200e-59
Identity = 101/134 (75.37%), Postives = 121/134 (90.30%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEE-TGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEP 60
           MSWQ YVD+HL+C++ +  G+HLTAAAI+G DGSVWAQSA+FPQFKP+EI  I+KDFDEP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GSLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNI 120
           G LAPTG+FL G+KYMVIQGEP AVIRGKKGAGGI +KKT Q++V G+Y+EPVTPGQCN+
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 IVEKLGDYLIEQGL 134
           +VE+LGDYLIEQGL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of Spo16080.1 vs. TAIR (Arabidopsis)
Match: AT4G29340.1 (profilin 4)

HSP 1 Score: 222.2 bits (565), Expect = 1.800e-58
Identity = 101/134 (75.37%), Postives = 120/134 (89.55%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEE-TGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEP 60
           MSWQTYVD+HL+C++ +  G+HLTAAAI+G DGSVWAQSA+FPQFK +E + I+KDFDEP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GSLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNI 120
           G LAPTGLF+ G KYMVIQGEPGAVIRGKKGAGGI +KKT Q+ V GIY+EPVTPGQCN+
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 IVEKLGDYLIEQGL 134
           +VE+LGDYL+EQGL
Sbjct: 121 VVERLGDYLLEQGL 134

[Close]

BLAST of Spo16080.1 vs. TAIR (Arabidopsis)
Match: AT2G19760.1 (profilin 1)

HSP 1 Score: 216.9 bits (551), Expect = 7.800e-57
Identity = 102/133 (76.69%), Postives = 114/133 (85.71%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQ+YVDDHL+C++E  GNHLTAAAILG DGSVWAQSA FPQ KP+EI  I KDF+EPG
Sbjct: 1   MSWQSYVDDHLMCDVE--GNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
            LAPTGLFLGG KYMVIQGE GAVIRGKKG GG+ +KKT QALV G YDEP+T GQCN++
Sbjct: 61  FLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLV 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYLIE  L
Sbjct: 121 VERLGDYLIESEL 131

[Close]

BLAST of Spo16080.1 vs. TAIR (Arabidopsis)
Match: AT4G29350.1 (profilin 2)

HSP 1 Score: 216.5 bits (550), Expect = 1.000e-56
Identity = 101/133 (75.94%), Postives = 114/133 (85.71%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQ+YVDDHL+CE+E  GNHLT AAI G DGSVWAQS++FPQ KP EIA I KDF+E G
Sbjct: 1   MSWQSYVDDHLMCEVE--GNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAG 60

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
            LAPTGLFLGG KYMV+QGE GAVIRGKKG GG+ +KKT QALV GIYDEP+T GQCN++
Sbjct: 61  HLAPTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLV 120

Query: 121 VEKLGDYLIEQGL 134
           VE+LGDYLIE GL
Sbjct: 121 VERLGDYLIESGL 131

[Close]

BLAST of Spo16080.1 vs. TAIR (Arabidopsis)
Match: AT5G56600.1 (profilin 3)

HSP 1 Score: 214.2 bits (544), Expect = 5.000e-56
Identity = 101/133 (75.94%), Postives = 112/133 (84.21%), Query Frame = 1


		  
Query: 1   MSWQTYVDDHLLCEIEETGNHLTAAAILGVDGSVWAQSASFPQFKPEEIAAIVKDFDEPG 60
           MSWQTYVDDHL+C++   GN LTAAAILG DGSVWAQS +FPQ KPEEI  I  DF  PG
Sbjct: 38  MSWQTYVDDHLMCDV--AGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPG 97

Query: 61  SLAPTGLFLGGIKYMVIQGEPGAVIRGKKGAGGICVKKTAQALVIGIYDEPVTPGQCNII 120
           +LAPTGLFLGG KYMVIQGEP AVIRGKKGAGG+ +KKT  ALV GIYDEP+TPGQCN++
Sbjct: 98  TLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMV 157

Query: 121 VEKLGDYLIEQGL 134
           VE LG+YLIE GL
Sbjct: 158 VENLGEYLIESGL 168

The following BLAST results are available for this feature:

BLAST of Spo16080.1 vs. NCBI nr
BLAST of Spo16080.1 vs. UniProtKB/TrEMBL
BLAST of Spo16080.1 vs. ExPASy Swiss-Prot
BLAST of Spo16080.1 vs. TAIR (Arabidopsis)

BLAST of Spo16080.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902171308\|gb\|KNA07985.1\|	1.8e-71	100.	hypothetical protein SOVF_1668...	[more]
gi\|731317399\|ref\|XP_010668774.1\|	1.5e-65	90.2	PREDICTED: profilin-3 [Beta vu...	[more]
gi\|902140200\|gb\|KNA04623.1\|	4.3e-65	88.7	hypothetical protein SOVF_1980...	[more]
gi\|731317401\|ref\|XP_010668781.1\|	6.2e-64	86.4	PREDICTED: profilin-3-like [Be...	[more]
gi\|625293889\|gb\|AHY24177.1\|	4.0e-63	85.7	profilin, partial [Prosopis ju...	[more]

BLAST of Spo16080.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QL47_SPIOL	1.2e-71	100.	Profilin OS=Spinacia oleracea ...	[more]
A0A0J8FQN7_BETVU	1.0e-65	90.2	Profilin OS=Beta vulgaris subs...	[more]
A0A0K9QD73_SPIOL	3.0e-65	88.7	Profilin OS=Spinacia oleracea ...	[more]
A0A0J8CWW8_BETVU	4.3e-64	86.4	Profilin OS=Beta vulgaris subs...	[more]
C3W2Q7_AMARE	2.8e-63	87.8	Profilin (Fragment) OS=Amarant...	[more]

BLAST of Spo16080.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PROCF_OLEEU	2.3e-63	84.9	Profilin-4 OS=Olea europaea PE...	[more]
PROCH_OLEEU	2.0e-62	84.8	Profilin-4 OS=Olea europaea PE...	[more]
PROF3_MALDO	2.6e-62	84.2	Profilin-3 OS=Malus domestica ...	[more]
PROCD_OLEEU	2.6e-62	84.2	Profilin-4 OS=Olea europaea PE...	[more]
PROF3_HEVBR	4.4e-62	82.7	Profilin-3 OS=Hevea brasiliens...	[more]

BLAST of Spo16080.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G19770.1	2.2e-59	75.3	profilin 5	[more]
AT4G29340.1	1.8e-58	75.3	profilin 4	[more]
AT2G19760.1	7.8e-57	76.6	profilin 1	[more]
AT4G29350.1	1.0e-56	75.9	profilin 2	[more]
AT5G56600.1	5.0e-56	75.9	profilin 3	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 3..12 score: 5.7E-51coord: 115..132 score: 5.7E-51coord: 23..32 score: 5.7E-51coord: 42..62 score: 5.7E-51coord: 66..80 score: 5.7E-51coord: 102..115 score: 5.7
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 1..14 score: 7.6E-55coord: 29..42 score: 7.6E-55coord: 119..132 score: 7.6E-55coord: 73..82 score: 7.6E-55coord: 54..68 score: 7.6E-55coord: 86..101 score: 7.6E-55coord: 106..119 score: 7.6
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..133 score: 4.0
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..132 score: 3.3
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..133 score: 1.8
IPR005455	Profilin	unknown	SSF55770	Profilin (actin-binding protein)	coord: 2..132 score: 3.79
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8 scor
None	No IPR available	GENE3D	3.30.450.30		coord: 2..133 score: 2.0
None	No IPR available	PANTHER	PTHR11604:SF7	PROFILIN-1-RELATED	coord: 1..133 score: 4.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003779	actin binding
molecular_function	GO:0003735	structural constituent of ribosome

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17110	0.67	Barchart \| Table
Spo24250	0.67	Barchart \| Table
Spo08768	0.65	Barchart \| Table