Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGTTCCATCATCACCACATCTCTCCGCTCCTCACCATCCATCTCCTCGATCGGGTGGATTTCGTTAGCATTTCTCTTGAATTTCTTCGGAGATCATTTTCCTCACTTCAGAGACCGTGTTCCCTTCTCTCTCCATTTTCTCTCTCTACTTCCATTTTCCTCCCAAAAATTACTTCTACCAAAAAAAAAAAAGTGTTCACTGTTCTATACTGGTACTCGCTTGTGTCTATCTGTCATAGTTCGAATACAGTCCATAATCATAGATCGAATAGAGGGGTTAGATTTGCAATTAGGCCACCAAATATGAAATTGTTCACTCAAAATTCTTTAGCTTTCTGCCATTCTCAATTTCTTTGAATAGACACCGAATTCCATAGCGCTTGTATTCAGAACTCAATTCTTTTGATCTTCTCTTCGAACTAGTAAGTATCCCATTGTTGTTTCCAGATTTTAATTACCACTATATGCGATTTCTTTTGTTTGATTTTGATGCTATGTAATCAGGATTCTTCAAAAAAAAAAGTCATGCGTTTATTTGAATCTTGATTATGCATTTGACAATTTAGTTTCCCGGTTTCTTTTTCATGCAATTTCCAGTTAATTTTCTCAAATTTAGCATTCTTCTCCTCGGAAAATCGTGGCATTGAATTTATTTTTTCTCAAACTGGGTAATTGTGATCAACACGACTTTCCAGAATAGGGTTCTTAGTTTCGTTCTAATTTGATTGAAGTTTCACTTAATTGATAAATGAAGTAGCTATTAATTTTGGTCTATGAGTTCAATTTTCATATTTTGAAATGGGTAACTGAATGAATGCGGATTTTGGAATGTTGATGGAAGAGGAGAACGGTGTCTTAGTTTTATAGTTTGATTAAATTACAATTGCAACTCAAGAGCATCTGATTCGATTTTCGTAGTCGATTTCAATGCTTCAATTATTGTAGAGAAATTCAGAAAGTAGTATGTTTCTCACATCTTGTTAACTTGAATTGCAGACTTCTCAATGAGTGAAAAGAAGAGGTATAGGATATTGATGGTGTCAGATTTTTTTTACCCAAATTTTGGGGGAGTAGAAAGTCACATTTATTATCTATCCCAGTGTTTGCTAAAACTCGGTCACAAGGTAAGTGATTCATCATTGTTCCACTTTGTTATTTAGTCTTTGTTTGTGACTTTGGTAATGTTTGGAGAAGTCGTATGTAAGTTAGGATATCATGTTTGATTGCGTAATTTCTGCAAGACTGTTGGTACGCACTATGCAGTATTGGTATCGAGTAGAGCTTATGGTGTATGTGCGTGATTCTACTGATTTAGTGATTTATGGATGTTTACTTTTATGTTGGTCCAAGTTTTATTCTAAATGGTGATTGCATTACTGTGTGATGAGTTGATGACTGTTCAGTACTCAATATTATTGGTTCTCTTGCTTTTTGAACTGCTAGTGTTTAGTTTGCTTTTGGGTGCAAAACTATTGGAAGTTCAAGTTGGCTTAGTTGGTTCTGGCGAGAAAACGACTTTGATGGTTTGTGGAAAATTTGTAGGTTGTAGTTTTGACTCATTCATATGGGAATCGCTCTGGTGTGCGATATATGACAAATGGCCTGAAAGTTTATTATGTGCCATGGAAGCCTCTATTCATGCAGAGTGTATTACCCACATTCTCTGGGACACTTCCGATTATGAGAACTATTCTTGTCCGGGAGAAGATTTCGTTGGTCCATGGACATCAAGCCTTCTCAACTCTCTGCCATGAAGCTTTGATGCATGCACGTACAATGGGATACAAAGTTGTTTTCACTGATCACTCCTTGTATGGCTTTGCTGATGTGGGTAGTATACACATGAACAAAGTTCTACAGTTTACCTTAGCAGATGCAACTAAAGCAATCTGTGTCTCCCATACAAGCAAGGAAAATACAGTGTTGAGGTCAGGTATTCCTGCTGAAAAGGTATATGTTATACCAAATGCTGTTGACACAGCTATGTTCAAGCCTGCACCCGAAAGACTTTCAAGTGACCAAATTGTCATTGTTGTGATAAGTAGATTGGTATACCGGAAAGGTGCAGATTTGCTTGTTGAAGTCATTCCTGAAGTTTGTCGTCTTCATCCAAATGTTAGTAACATGAGATTTTTTTTAATCTATTTTGGATTTAATACGAAATTAGTGTTTCCCGCCTACGTCTTAACTTATCAGAATTCAAATGTGGTTTTGGAACCTTTTTCATGCATAGATATTAGATATGTGGTTCATTTGTTTTTTTACTATTAACAAAGGATATCAACTTATCATCTTAGGTTCGTTTCATTATTGGAGGTGATGGTCCAAAAAGAGTACGGCTAGAAGAGATGAGAGAAAAACATTCTCTTCAAGATAGGGTTGAAATGTTGGGTGCTGTTCCACATGCTCAGGTTCGATCTGTGTTAATATCTGGACATATTTTTTTGAACAGGTAACTCTGTCTCCTTTAGATTTTAGAATAAGAGGAAAGGAAAATTTTCTCCATATTATCTGTCATGCTTTGTGCAGCCACTTACAATTTGTGGAAGTGTTGGATTTTCTGATATCTTTGTTTCTTCCTACTATGAACAGCTGTTTTTGTTGTCTTTGAGATAAATTTAACATCTTAATTGTTTCTTATCTCATTTAACTCCATGGAGGCTTGCTTTTAGCTTCACTTGGATTAGAAATATACAATTGAGTTATAATACGGTAGAGCATAAGTATAGGAGTGGCAGTCTGACTTTCTTGCAATAGATCCGAAGAATAGAATTGCTTAAACTTGTCTACTTTGGTTACACTTAACGAGTTGTATGCTGAGGAATAGAGTTGCTTACTTTTAATGCGTTTCTGAGGTCTATAGCTCTGTGTGGTTATTTTATTAAGTAAATAACTTACTGTGGGAGTGAATAGTTGAAGTATTCTTTTAATTCCATGGGAAGAATTTCAATTTGTGGGGCTTATATGTTCCTGAAACTTTCAAGGTATTTGGTTAATTTTGTAAGATTGGGTTGAGTAAGGATTCTCTTTCCAGCCAAACTCTTATTTTTTACTAGTTACACCAGATAAAAGCCTTTTGTTTCTTCTTTTGTACTACGTAGAAAAGATGAATGAGAAACCCTGTTGATTTCGTTCTATTTGTTTGTGGATTATGTTAGACCCTTTTTATGCTAGGAAATTTAAGGCTTTCCCTGAAGACTGAAGCCTTACAAGAACTCTAAGCTTTAATCATAGAACCGTGAATTTAAAATTTCAAACCTCATGGCTGAGTCAGATGACCATTTATGTCCTACTTGTAAATAAAGCATATTAGATCTAACGCTGAAGTTGTGAAGCTTCCTTTTTTTCTTTTTTTCCCCTACCTCTTCTGCAGTTGGGTAACCTTCCTGATGTTCTAAGTTCCAATGCTGCCTTGATGTTGGACGCTGTGTAATTTGCTTTGTTTTAACTTCTGGACAGTTCTTTAACGGAAGCATTTTGCATAGCTATATTGGAAGCCGCTAGTTGTGGATTATTAACAGTCAGCACACGTGTAGGAGGTGTCCCTGAGGCAAGTGTTAAGAATTACCTTATCAGCTTGAACTTCTCCTCATGTTTATCGTCCTCGTCTTTTAACCAGCCTTTGTCTGTGGATCAAACTGAATTTTCTGCATTTTAG TGTTCCATCATCACCACATCTCTCCGCTCCTCACCATCCATCTCCTCGATCGGGTGGATTTCGTTAGCATTTCTCTTGAATTTCTTCGGAGATCATTTTCCTCACTTCAGAGACCGTGTTCCCTTCTCTCTCCATTTTCTCTCTCTACTTCCATTTTCCTCCCAAAAATTACTTCTACCAAAAAAAAAAAAGTGTTCACTGTTCTATACTGGTACTCGCTTGTGTCTATCTGTCATAGTTCGAATACAGTCCATAATCATAGATCGAATAGAGGGGTTAGATTTGCAATTAGGCCACCAAATATGAAATTGTTCACTCAAAATTCTTTAGCTTTCTGCCATTCTCAATTTCTTTGAATAGACACCGAATTCCATAGCGCTTGTATTCAGAACTCAATTCTTTTGATCTTCTCTTCGAACTAACTTCTCAATGAGTGAAAAGAAGAGGTATAGGATATTGATGGTGTCAGATTTTTTTTACCCAAATTTTGGGGGAGTAGAAAGTCACATTTATTATCTATCCCAGTGTTTGCTAAAACTCGGTCACAAGGTTGTAGTTTTGACTCATTCATATGGGAATCGCTCTGGTGTGCGATATATGACAAATGGCCTGAAAGTTTATTATGTGCCATGGAAGCCTCTATTCATGCAGAGTGTATTACCCACATTCTCTGGGACACTTCCGATTATGAGAACTATTCTTGTCCGGGAGAAGATTTCGTTGGTCCATGGACATCAAGCCTTCTCAACTCTCTGCCATGAAGCTTTGATGCATGCACGTACAATGGGATACAAAGTTGTTTTCACTGATCACTCCTTGTATGGCTTTGCTGATGTGGGTAGTATACACATGAACAAAGTTCTACAGTTTACCTTAGCAGATGCAACTAAAGCAATCTGTGTCTCCCATACAAGCAAGGAAAATACAGTGTTGAGGTCAGGTATTCCTGCTGAAAAGGTATATGTTATACCAAATGCTGTTGACACAGCTATGTTCAAGCCTGCACCCGAAAGACTTTCAAGTGACCAAATTGTCATTGTTGTGATAAGTAGATTGGTATACCGGAAAGGTGCAGATTTGCTTGTTGAAGTCATTCCTGAAGTTTGTCGTCTTCATCCAAATGTTCGTTTCATTATTGGAGGTGATGGTCCAAAAAGAGTACGGCTAGAAGAGATGAGAGAAAAACATTCTCTTCAAGATAGGGTTGAAATGTTGGGTGCTGTTCCACATGCTCAGGTTCGATCTGTGTTAATATCTGGACATATTTTTTTGAACAGTTCTTTAACGGAAGCATTTTGCATAGCTATATTGGAAGCCGCTAGTTGTGGATTATTAACAGTCAGCACACGTGTAGGAGGTGTCCCTGAGGCAAGTGTTAAGAATTACCTTATCAGCTTGAACTTCTCCTCATGTTTATCGTCCTCGTCTTTTAACCAGCCTTTGTCTGTGGATCAAACTGAATTTTCTGCATTTTAG ATGAGTGAAAAGAAGAGGTATAGGATATTGATGGTGTCAGATTTTTTTTACCCAAATTTTGGGGGAGTAGAAAGTCACATTTATTATCTATCCCAGTGTTTGCTAAAACTCGGTCACAAGGTTGTAGTTTTGACTCATTCATATGGGAATCGCTCTGGTGTGCGATATATGACAAATGGCCTGAAAGTTTATTATGTGCCATGGAAGCCTCTATTCATGCAGAGTGTATTACCCACATTCTCTGGGACACTTCCGATTATGAGAACTATTCTTGTCCGGGAGAAGATTTCGTTGGTCCATGGACATCAAGCCTTCTCAACTCTCTGCCATGAAGCTTTGATGCATGCACGTACAATGGGATACAAAGTTGTTTTCACTGATCACTCCTTGTATGGCTTTGCTGATGTGGGTAGTATACACATGAACAAAGTTCTACAGTTTACCTTAGCAGATGCAACTAAAGCAATCTGTGTCTCCCATACAAGCAAGGAAAATACAGTGTTGAGGTCAGGTATTCCTGCTGAAAAGGTATATGTTATACCAAATGCTGTTGACACAGCTATGTTCAAGCCTGCACCCGAAAGACTTTCAAGTGACCAAATTGTCATTGTTGTGATAAGTAGATTGGTATACCGGAAAGGTGCAGATTTGCTTGTTGAAGTCATTCCTGAAGTTTGTCGTCTTCATCCAAATGTTCGTTTCATTATTGGAGGTGATGGTCCAAAAAGAGTACGGCTAGAAGAGATGAGAGAAAAACATTCTCTTCAAGATAGGGTTGAAATGTTGGGTGCTGTTCCACATGCTCAGGTTCGATCTGTGTTAATATCTGGACATATTTTTTTGAACAGTTCTTTAACGGAAGCATTTTGCATAGCTATATTGGAAGCCGCTAGTTGTGGATTATTAACAGTCAGCACACGTGTAGGAGGTGTCCCTGAGGCAAGTGTTAAGAATTACCTTATCAGCTTGAACTTCTCCTCATGTTTATCGTCCTCGTCTTTTAACCAGCCTTTGTCTGTGGATCAAACTGAATTTTCTGCATTTTAG MSEKKRYRILMVSDFFYPNFGGVESHIYYLSQCLLKLGHKVVVLTHSYGNRSGVRYMTNGLKVYYVPWKPLFMQSVLPTFSGTLPIMRTILVREKISLVHGHQAFSTLCHEALMHARTMGYKVVFTDHSLYGFADVGSIHMNKVLQFTLADATKAICVSHTSKENTVLRSGIPAEKVYVIPNAVDTAMFKPAPERLSSDQIVIVVISRLVYRKGADLLVEVIPEVCRLHPNVRFIIGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEASVKNYLISLNFSSCLSSSSFNQPLSVDQTEFSAF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16124.1 vs. NCBI nr
Match: gi|902202965|gb|KNA14441.1| (hypothetical protein SOVF_106800 [Spinacia oleracea]) HSP 1 Score: 623.2 bits (1606), Expect = 2.700e-175 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 1
BLAST of Spo16124.1 vs. NCBI nr
Match: gi|731317370|ref|XP_010668681.1| (PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 609.4 bits (1570), Expect = 4.000e-171 Identity = 304/313 (97.12%), Postives = 309/313 (98.72%), Query Frame = 1
BLAST of Spo16124.1 vs. NCBI nr
Match: gi|661889486|emb|CDP07073.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 578.6 bits (1490), Expect = 7.500e-162 Identity = 285/323 (88.24%), Postives = 307/323 (95.05%), Query Frame = 1
BLAST of Spo16124.1 vs. NCBI nr
Match: gi|697097142|ref|XP_009619923.1| (PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X4 [Nicotiana tomentosiformis]) HSP 1 Score: 577.4 bits (1487), Expect = 1.700e-161 Identity = 283/313 (90.42%), Postives = 300/313 (95.85%), Query Frame = 1
BLAST of Spo16124.1 vs. NCBI nr
Match: gi|697097146|ref|XP_009619937.1| (PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X6 [Nicotiana tomentosiformis]) HSP 1 Score: 577.4 bits (1487), Expect = 1.700e-161 Identity = 283/313 (90.42%), Postives = 300/313 (95.85%), Query Frame = 1
BLAST of Spo16124.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4L6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106800 PE=4 SV=1) HSP 1 Score: 623.2 bits (1606), Expect = 1.900e-175 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 1
BLAST of Spo16124.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1Q8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g032740 PE=4 SV=1) HSP 1 Score: 609.4 bits (1570), Expect = 2.800e-171 Identity = 304/313 (97.12%), Postives = 309/313 (98.72%), Query Frame = 1
BLAST of Spo16124.1 vs. UniProtKB/TrEMBL
Match: A0A068UHF6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024179001 PE=4 SV=1) HSP 1 Score: 578.6 bits (1490), Expect = 5.300e-162 Identity = 285/323 (88.24%), Postives = 307/323 (95.05%), Query Frame = 1
BLAST of Spo16124.1 vs. UniProtKB/TrEMBL
Match: M1AVX5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012127 PE=4 SV=1) HSP 1 Score: 575.1 bits (1481), Expect = 5.800e-161 Identity = 283/314 (90.13%), Postives = 300/314 (95.54%), Query Frame = 1
BLAST of Spo16124.1 vs. UniProtKB/TrEMBL
Match: K4CPT0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 573.9 bits (1478), Expect = 1.300e-160 Identity = 282/313 (90.10%), Postives = 299/313 (95.53%), Query Frame = 1
BLAST of Spo16124.1 vs. ExPASy Swiss-Prot
Match: PIGA_HUMAN (Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 6.700e-110 Identity = 191/317 (60.25%), Postives = 247/317 (77.92%), Query Frame = 1
BLAST of Spo16124.1 vs. ExPASy Swiss-Prot
Match: PIGA_MOUSE (N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein OS=Mus musculus GN=Piga PE=2 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 2.800e-108 Identity = 187/315 (59.37%), Postives = 243/315 (77.14%), Query Frame = 1
BLAST of Spo16124.1 vs. ExPASy Swiss-Prot
Match: GPI3_SCHPO (Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi3 PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 3.200e-104 Identity = 181/303 (59.74%), Postives = 231/303 (76.24%), Query Frame = 1
BLAST of Spo16124.1 vs. ExPASy Swiss-Prot
Match: GPI3_YEAS1 (Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SPT14 PE=3 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 1.200e-90 Identity = 174/357 (48.74%), Postives = 238/357 (66.67%), Query Frame = 1
BLAST of Spo16124.1 vs. ExPASy Swiss-Prot
Match: GPI3_YEAS6 (Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SPT14 PE=3 SV=2) HSP 1 Score: 334.7 bits (857), Expect = 1.200e-90 Identity = 174/357 (48.74%), Postives = 238/357 (66.67%), Query Frame = 1
BLAST of Spo16124.1 vs. TAIR (Arabidopsis)
Match: AT3G45100.1 (UDP-Glycosyltransferase superfamily protein) HSP 1 Score: 543.1 bits (1398), Expect = 1.200e-154 Identity = 266/313 (84.98%), Postives = 291/313 (92.97%), Query Frame = 1
BLAST of Spo16124.1 vs. TAIR (Arabidopsis)
Match: AT5G01220.1 (sulfoquinovosyldiacylglycerol 2) HSP 1 Score: 50.4 bits (119), Expect = 2.500e-6 Identity = 69/326 (21.17%), Postives = 130/326 (39.88%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16124.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16124.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16124.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo16124.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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