Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATTTTGTTGGTATTTATAGGCCCAACTAGCTCTCTTTCTCACATTTCTCATTTTCCTCACCACTTGTATTTCCATACTTTTCCTTCTCTATCGTCTTTGTAATACACCGTATATTTGTGAATTTTTCAGAGAAAATAATTTTGAAGAGGAAAATTAAAAACAAAATAATGAAGGTAGGAGAGAGTGGGTTTACTTCTGAGAAAGAAACATTACTCACTGTTTGTAAAACAAATCTGTTCTTCACTGGTGATGGTTTCACTGTTTATAATTGCCATGGCGAACTCGTGTTCCGAGTTGACTCGTATGGTCCTGATTGGCGCGACCAGGATGAACTCGTACTCATGGATGCTTCTGGACATTGCCTCCTCACCGTACGTCGCAAGGTTGGTTCTATTCTCTGTCCCTCCTTTAGAATATTACTCCGTGATGGAATATATTTCACTTTTGAACTTTTTATTGATGATTATATAATATTTTACCATATATAAATGTTGTTTAAAGAGGGTCAATACAAGGTTAATGGTTATATAACATAAAAATATGTTTTGTATTTTCTCCGTTTCTTTTTGTTCTTTACGTTTGGCTTTTTGCACGTTTATTAACGTCTAATTAATGTGCATTTTTTTTATATAAACAAGGAAAATTAAGTTTACTTATAATATTTTCACTCTTAACAAAATTCCGATATTGGAAAAATGAGAATAGAAAAGTGTGAGAGATTAAATGATCAAATGAATTTAATTGGTTAAAATAATCATTAGACACAAATTTTTATAGAAATTAAAGTATTTATGTGATAATATAAAAGGAAATATAAAGTACTCTTTAAAAATAAAAAAAAACGAAAAGAACAAAAAGAAACGGAGAGAGTGATAATTTTAATTTTTTATATATATTCATAATCACATACAAAGTACGTACTTATGAGAAGTATAAATGATTAATTGATTATAGTTAAGCATTGACAAATAGTTAAACACCAATAAAATCTTAGCTTAATAGCAAAGACTAACGGCTAATTAAGGTCTTGCAGTAGTGGTTAAGACTGAGCGTTTGTTTTTAATATATCTCATGCTCGAATCACCCTCCTCCGATTTATAATTCTATAACCCAAGTTAATAAAGGAGTTGTTTATGATAAGTCATAAATTCGTATCCATTCTCCCTATTTTGATTTGTAAATTTTAATGCTCATGTAGCTCATCGGAAAAAGAATTTTTTTTTTTTTAAAAAAAGTGCCAGTTGCGATTATTTAAGGAACACGGCATTCGAATAACTCAAATGAAAGGTATGGGAGATTGGGAGCGGGTCACCTACTAGCACCAATTAAGACGCGCCCCTCTAAGCATGTGACATTGTTATTCTTGTTTAAATCAGTGAGTCGACTCAGTGAGTTAAGCTTGGTGATTTTCTTAGTTTTTGACGTTTTTTTTACCGCGGGGAATTAGTGTTAATGAGTAGTTCTAAAGTGTGGTTTCAAACTTTTATATAAGGCCGTTTTAAATAAAAGACTGCATTGGTGTCATATAAGTTAAGTACTGGAACTAATTAGTTAAGTACTGAAACTAATTAGTTAAGCACTAGAATCAATTAGTTAAATAATGAAACTAATTAGTTAAGCAATAAAACTAATTAATTAATCAATTAAAGTGGTCTTTTCGATAAAACGGTCTTACATAAAAGTTTTCGGGTTAAACAATATTATAAAATTGTGGTTTGGTTAAGTGAGTATCAAAAAAATTAGATTCTAGATTCCTATTTGTGATTGAGTTCTGACTCGTTCATTTGAGCACATAGTCAACTCGTGAAGAAAATTTAGATCACTCCAACATGCAAACTGCCAAGTGGGAATTTGGAAGTATAAACAAAGCAAGATCTAGAATTTGCGGATTTTTATTTTTTGTGGCATTGGTTGAAAATTCTTAATAAATATTAGAAAAGTATTCCCTCCACCCCGTATTATTCGCAACAATTTGACAGTTACATAATAACAACAATTTGACAGTTACATAATGTTAGCTAGTCCAATTAATTGACTTCTTAATTTATTTTGAGGTGATTTTTTTTTTCTTCAGGAAAATGATATATTAGGGCTGCATACAAGAACCTAAAAATAAAAACAAATAATTTATACTCTGTACTACTCAATTCTATATTAATTACGCTGATTTAACGCGTGATATAATGACATTAATGAAAAAATTATTTTTATAGTAAAAACAAATAAAAAGAAAGTAGGACCATATTACCATAGTCAGGGCTATCACTTCTTAACGTACAAAGATAACGAAACAAAATCAAAATCACTCCAAATTTGGTTAAAAGTTACTCCAGTAGTCCAATATATGTCGTCGTATAGTAAAATTATTACTACTGTTATTGTACACTCGGGACACCAAAAAAAAAAAAAAAAATGTCAAAAAAAATACTACCGTTAATGTTTACTTAAATTAACGTTAAGAAATGCTTGATTTGTTCCTAAATAAATGTTGTTTGAACTCATTTCCGTTTCTAAATGAGTAGAATATATCAACGAAACTTCCACTTTGATAACTTAATTATTGCATGAAGTAACTGCGTGATGCCGTGATCATTATTTTTTTTAAAAAAAATAATGATCACGGCATCACGCAGTTACTTCATGCAATAATTAAGTTATCAAAGTGGAAGTTTCGTTGATATATTCTACTCATTTAGAAACGGAAATGAGTTCAAACAACATTTATTTAGGAACAAATCAAGCATTTCTTAACGTTAATTTAAGTAAACATTAACGGTAGTATTTTTTTTGACATTTTTTTTTTTTTTTTTGCCAATTATTGAAACAACAGTACCTTTATGAATTGAAAGGTGTAAAAGCACAAACTCCGTAAAATTTACTCTGTTGTACACGAGTTTTGATACTCAATCCAACTCTTTTAGAATAAAGCATTTGTAACTGTGTGCACGATGTTACGAATAAATTACGCACTTTTACGTAAAATAAACATGGCACTTATTTACGATCAATAAAAGTGTTTTGATACTGTTCATTTGTATTGTTTTGGTGCTGCTGTGCTGGTAGGATATCATTTGCCGATCATCTATTATTAAGCACTCGAGTATAACTAGGCTATTTTTTGTTTGACTTATTTCAAACAAAATAAGTTCAGATAAAATAAGTCGAACACCATAAGAGCAATAAAAATTACAAATGGAGTTGAGAGACTTCGAACCGAGTCCTATTGTGTACAAGCTATAATTGTTAACCACTAGGTCAAAGACTCCACAGATGGATACGAATTCACAATTTATTATTCATCATCTCTGCATATGAGCATGTGAACCTTTTTATTTTTTATTTTTAATGTTAAAGTGTCACTACAAGAAATTGTACTATTAATAACGGGAAATTCCGTCGCGAAAGGTCAATAATCGTTGATTAACGACGGGATTTCCTGTCGCGAACCCGTCATAAAAGGGGGCCGTCGTTAATAGAAAATTCCGTCACAAATCCGTCGTAAACCCGTCGTAAAAGACATTTGCGACGGTTGTTCCCGTCATTGTTTGGTTGTTAGCCCCGTCGTAAAAGGCTTTTACGACGGGATTTTTGACCCGTCGTAATTAGGTTGTCGTTAAAGATACAAATTCTTGTAGTGTGTGTACCTTAATTTCGCGTTTACGCAAGAAATTTCTTACAGTTTATGCTTAATAATGAGATTATGAGATACATATATATTTATAGTATTATAATAACTAGATTAAGACCTAACAAGTTGAAGATTGATCTACTACGTTCCTTAAATAGTTTAATTGTACTTGCATTGCAAGTTGTGATGCATTGACCTAATGTATTTATGTCGGTCGAATTGATTGCTTAATTATGGAAACAAAACTCTTAATTAAAGCTATGTTAATTAATTAATTACAGAGGCCAAGCTTACACAACAGATGGGAAGGCTACGCAGGAGAAAGAACGGAAGGATCAAAGCCAATATTCAGCGTGAAAAGATCATCAATAATCGGACGGTCAGGAGTGACCGTAGAAGCGTACCAAAATCCGGGTGAAGAGTACCAGATAGACGGGTCGTTTGCACAAAGAAATTGTACCATTTACGACGCTACAACTAGGGAAGTTATGGCCGAGATCCGAAGAAAAGTGGATATTTCCCTTAATGTGGTCCTAGGCAAAGACGTGTTTTCTCTACTCGTAAAACCCGGGTTTGACGCCGCGTTTACCATGGGCCTCGTGTTGGTTTTGGACCAGATTAACTCGGAAGGCCTCGTTGATGTTATTTCAAGTCCGGATTCCGATGGTTCCCACGGCGGTCGTCATGACACTATGTGAAGATCTATAAATGAGGGAGGGTAAAGGGAATGAAAAAAACGAGTTTAATCGTGTAATGAAATGAACCGTTAAAAACTCTCCGATAACTGGACTATCCAATAACCCGTTACGTGGGATCCAATCCAGCTCATAAGGTCAAGAGGGCCCATTTTATGTGACTATTCTTTTCACTTTTACTTGTTGTGGCTATTTGTGATGTGGGTTTCGGGTTAGGTGTTCCAATTGTCATTGTCTTTGTCTTTGAGATATTTCAGATGTAAATTATAAATTGTTAATTATTGGAAGGAAAAAAAAGTAATGCTAATTGAGTAATTTGGCTGCCTTTTATAAAGTTATTTGGATTTCTCGTTGTAAAGGTCCATTGGATTTTTGTTAATCCTTCCCGTTTGGGATGATTATTAATTATTGTAGATGCAATCTTAAAT TTATTTTGTTGGTATTTATAGGCCCAACTAGCTCTCTTTCTCACATTTCTCATTTTCCTCACCACTTGTATTTCCATACTTTTCCTTCTCTATCGTCTTTGTAATACACCGTATATTTGTGAATTTTTCAGAGAAAATAATTTTGAAGAGGAAAATTAAAAACAAAATAATGAAGGTAGGAGAGAGTGGGTTTACTTCTGAGAAAGAAACATTACTCACTGTTTGTAAAACAAATCTGTTCTTCACTGGTGATGGTTTCACTGTTTATAATTGCCATGGCGAACTCGTGTTCCGAGTTGACTCGTATGGTCCTGATTGGCGCGACCAGGATGAACTCGTACTCATGGATGCTTCTGGACATTGCCTCCTCACCGTACGTCGCAAGAGGCCAAGCTTACACAACAGATGGGAAGGCTACGCAGGAGAAAGAACGGAAGGATCAAAGCCAATATTCAGCGTGAAAAGATCATCAATAATCGGACGGTCAGGAGTGACCGTAGAAGCGTACCAAAATCCGGGTGAAGAGTACCAGATAGACGGGTCGTTTGCACAAAGAAATTGTACCATTTACGACGCTACAACTAGGGAAGTTATGGCCGAGATCCGAAGAAAAGTGGATATTTCCCTTAATGTGGTCCTAGGCAAAGACGTGTTTTCTCTACTCGTAAAACCCGGGTTTGACGCCGCGTTTACCATGGGCCTCGTGTTGGTTTTGGACCAGATTAACTCGGAAGGCCTCGTTGATGTTATTTCAAGTCCGGATTCCGATGGTTCCCACGGCGGTCGTCATGACACTATGTGAAGATCTATAAATGAGGGAGGGTAAAGGGAATGAAAAAAACGAGTTTAATCGTGTAATGAAATGAACCGTTAAAAACTCTCCGATAACTGGACTATCCAATAACCCGTTACGTGGGATCCAATCCAGCTCATAAGGTCAAGAGGGCCCATTTTATGTGACTATTCTTTTCACTTTTACTTGTTGTGGCTATTTGTGATGTGGGTTTCGGGTTAGGTGTTCCAATTGTCATTGTCTTTGTCTTTGAGATATTTCAGATGTAAATTATAAATTGTTAATTATTGGAAGGAAAAAAAAGTAATGCTAATTGAGTAATTTGGCTGCCTTTTATAAAGTTATTTGGATTTCTCGTTGTAAAGGTCCATTGGATTTTTGTTAATCCTTCCCGTTTGGGATGATTATTAATTATTGTAGATGCAATCTTAAAT ATGAAGGTAGGAGAGAGTGGGTTTACTTCTGAGAAAGAAACATTACTCACTGTTTGTAAAACAAATCTGTTCTTCACTGGTGATGGTTTCACTGTTTATAATTGCCATGGCGAACTCGTGTTCCGAGTTGACTCGTATGGTCCTGATTGGCGCGACCAGGATGAACTCGTACTCATGGATGCTTCTGGACATTGCCTCCTCACCGTACGTCGCAAGAGGCCAAGCTTACACAACAGATGGGAAGGCTACGCAGGAGAAAGAACGGAAGGATCAAAGCCAATATTCAGCGTGAAAAGATCATCAATAATCGGACGGTCAGGAGTGACCGTAGAAGCGTACCAAAATCCGGGTGAAGAGTACCAGATAGACGGGTCGTTTGCACAAAGAAATTGTACCATTTACGACGCTACAACTAGGGAAGTTATGGCCGAGATCCGAAGAAAAGTGGATATTTCCCTTAATGTGGTCCTAGGCAAAGACGTGTTTTCTCTACTCGTAAAACCCGGGTTTGACGCCGCGTTTACCATGGGCCTCGTGTTGGTTTTGGACCAGATTAACTCGGAAGGCCTCGTTGATGTTATTTCAAGTCCGGATTCCGATGGTTCCCACGGCGGTCGTCATGACACTATGTGA MKVGESGFTSEKETLLTVCKTNLFFTGDGFTVYNCHGELVFRVDSYGPDWRDQDELVLMDASGHCLLTVRRKRPSLHNRWEGYAGERTEGSKPIFSVKRSSIIGRSGVTVEAYQNPGEEYQIDGSFAQRNCTIYDATTREVMAEIRRKVDISLNVVLGKDVFSLLVKPGFDAAFTMGLVLVLDQINSEGLVDVISSPDSDGSHGGRHDTM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16177.1 vs. NCBI nr
Match: gi|902186069|gb|KNA10612.1| (hypothetical protein SOVF_142520 [Spinacia oleracea]) HSP 1 Score: 429.5 bits (1103), Expect = 3.400e-117 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1
BLAST of Spo16177.1 vs. NCBI nr
Match: gi|731359164|ref|XP_010691138.1| (PREDICTED: protein LURP-one-related 12 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 357.5 bits (916), Expect = 1.600e-95 Identity = 174/203 (85.71%), Postives = 185/203 (91.13%), Query Frame = 1
BLAST of Spo16177.1 vs. NCBI nr
Match: gi|731359166|ref|XP_010691139.1| (PREDICTED: protein LURP-one-related 5-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 303.1 bits (775), Expect = 3.700e-79 Identity = 153/206 (74.27%), Postives = 175/206 (84.95%), Query Frame = 1
BLAST of Spo16177.1 vs. NCBI nr
Match: gi|595943547|ref|XP_007215974.1| (hypothetical protein PRUPE_ppa011580mg [Prunus persica]) HSP 1 Score: 281.2 bits (718), Expect = 1.500e-72 Identity = 141/198 (71.21%), Postives = 163/198 (82.32%), Query Frame = 1
BLAST of Spo16177.1 vs. NCBI nr
Match: gi|720098335|ref|XP_010247599.1| (PREDICTED: protein LURP-one-related 12-like isoform X3 [Nelumbo nucifera]) HSP 1 Score: 280.8 bits (717), Expect = 2.000e-72 Identity = 139/192 (72.40%), Postives = 160/192 (83.33%), Query Frame = 1
BLAST of Spo16177.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTM5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142520 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 2.400e-117 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1
BLAST of Spo16177.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ECC3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g219560 PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 1.100e-95 Identity = 174/203 (85.71%), Postives = 185/203 (91.13%), Query Frame = 1
BLAST of Spo16177.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BI57_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g219570 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.600e-79 Identity = 153/206 (74.27%), Postives = 175/206 (84.95%), Query Frame = 1
BLAST of Spo16177.1 vs. UniProtKB/TrEMBL
Match: M5X6K3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011580mg PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 1.000e-72 Identity = 141/198 (71.21%), Postives = 163/198 (82.32%), Query Frame = 1
BLAST of Spo16177.1 vs. UniProtKB/TrEMBL
Match: A0A067KLF8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06137 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.000e-72 Identity = 138/189 (73.02%), Postives = 156/189 (82.54%), Query Frame = 1
BLAST of Spo16177.1 vs. ExPASy Swiss-Prot
Match: LOR12_ARATH (Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 3.800e-68 Identity = 121/191 (63.35%), Postives = 153/191 (80.10%), Query Frame = 1
BLAST of Spo16177.1 vs. ExPASy Swiss-Prot
Match: LOR5_ARATH (Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=2 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.300e-65 Identity = 128/188 (68.09%), Postives = 147/188 (78.19%), Query Frame = 1
BLAST of Spo16177.1 vs. ExPASy Swiss-Prot
Match: LOR8_ARATH (Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.300e-27 Identity = 79/183 (43.17%), Postives = 108/183 (59.02%), Query Frame = 1
BLAST of Spo16177.1 vs. ExPASy Swiss-Prot
Match: LOR15_ARATH (Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.300e-20 Identity = 56/177 (31.64%), Postives = 103/177 (58.19%), Query Frame = 1
BLAST of Spo16177.1 vs. ExPASy Swiss-Prot
Match: LOR17_ARATH (Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590 PE=2 SV=2) HSP 1 Score: 97.8 bits (242), Expect = 1.500e-19 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 1
BLAST of Spo16177.1 vs. TAIR (Arabidopsis)
Match: AT3G15810.1 (Protein of unknown function (DUF567)) HSP 1 Score: 259.2 bits (661), Expect = 2.200e-69 Identity = 121/191 (63.35%), Postives = 153/191 (80.10%), Query Frame = 1
BLAST of Spo16177.1 vs. TAIR (Arabidopsis)
Match: AT1G80120.1 (Protein of unknown function (DUF567)) HSP 1 Score: 250.0 bits (637), Expect = 1.300e-66 Identity = 128/188 (68.09%), Postives = 147/188 (78.19%), Query Frame = 1
BLAST of Spo16177.1 vs. TAIR (Arabidopsis)
Match: AT2G38640.1 (Protein of unknown function (DUF567)) HSP 1 Score: 122.9 bits (307), Expect = 2.400e-28 Identity = 79/183 (43.17%), Postives = 108/183 (59.02%), Query Frame = 1
BLAST of Spo16177.1 vs. TAIR (Arabidopsis)
Match: AT5G01750.2 (Protein of unknown function (DUF567)) HSP 1 Score: 100.5 bits (249), Expect = 1.300e-21 Identity = 56/177 (31.64%), Postives = 103/177 (58.19%), Query Frame = 1
BLAST of Spo16177.1 vs. TAIR (Arabidopsis)
Match: AT5G41590.1 (Protein of unknown function (DUF567)) HSP 1 Score: 97.8 bits (242), Expect = 8.300e-21 Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16177.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16177.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16177.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo16177.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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