Spo16279 (gene) | SpinachBase

Overview


Name	Spo16279
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RNA polymerase II C-terminal domain phosphatase-like protein 4
Location	SpoScf_03985 : 11047 .. 12150 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGCAACAACTCGACGAAGAAGCAGGCACAAATTTCAGACTCGATTTATTATCATCATTATTAGGTCAACAAATTGCATCAGGAATTCTAAATTACAACACAATTGATGATGATGATGAAGATCGTGTTCCGAATTCATGCCCCCATCCTGTTTTTATCGGAAATTCGTGCACTAAATGCGGTCAAGAAACAAACGGTACGATTTCTACGATACCCTTTTGGTACATTTACCCTAGATTAAATGTATGTTTGAAGGAGGTTAATCGAATTCGAGATACCAATTTGCAAAGGTTATTATCCCGCAGAAAGCTTCATTTAGTTGTTGATTTGGATCATACGCTTGTTCATACACGGAAGTTGTACAAACTTAGTCCAGAAGATAGGAACTTTCTTCGACTTAGGTCAAAAAGATATGGAGTTGATTATAATTTGGCAGGGGAATTAGGTACATTGTTTCAGGTGGGTGATGGGTGGACGAAATTACGGCCATTTGTTCGCGAATTTCTCAGGGAGGCGAGCACGATGTTTGACATAACAATATATACCCTAGGGTGTCGTGCATATGCTTGGGATATGTCGAAATTGCTCGATCCTGATGGGATGTATTTCGATAATTGGAGGGTTATTTCAAGGGAGGACTGTGTTGCTTTAGACAAGCACAAGAAGTGTCTGGATGTTGTTTTGGAACACGAACGAGTTGTTGTGGTAATGGATGATAATGAAGCCGTTTGGGAGGATCATAAGACTAACTTGTTTAAAGTAACGCCTTATAATTACTTTTCTTATTTTAGTCCTGAGGATAAAGTTCATGATGCTTCCCCTCCGAGGCTGTCTTGGTCTCAGCTGAATGGGGACGAAAGCGGAGAAAATGGAGTGCTAGCAATGGCTTTAGATAAGCTAAGGCTTGTTCATCAGGCTTTCTTTGATGATAATTCGACTGTCAAGGGGATTGAGGATTATGGTAACAGGGATGTAAGGCAAGTTCTTCAAAGGGTACTGATGAAGCAAAAATCATTGTCTAAGAAGCAAAAGAAACAACAATTGAAGAAGATTAATTATAATGGGTTAGCACGAAATCTACAAGCTGCACATCTTTGA

mRNA sequence

ATGGAGCAGCAACAACTCGACGAAGAAGCAGGCACAAATTTCAGACTCGATTTATTATCATCATTATTAGGTCAACAAATTGCATCAGGAATTCTAAATTACAACACAATTGATGATGATGATGAAGATCGTGTTCCGAATTCATGCCCCCATCCTGTTTTTATCGGAAATTCGTGCACTAAATGCGGTCAAGAAACAAACGGTACGATTTCTACGATACCCTTTTGGTACATTTACCCTAGATTAAATGTATGTTTGAAGGAGGTTAATCGAATTCGAGATACCAATTTGCAAAGGTTATTATCCCGCAGAAAGCTTCATTTAGTTGTTGATTTGGATCATACGCTTGTTCATACACGGAAGTTGTACAAACTTAGTCCAGAAGATAGGAACTTTCTTCGACTTAGGTCAAAAAGATATGGAGTTGATTATAATTTGGCAGGGGAATTAGGTACATTGTTTCAGGTGGGTGATGGGTGGACGAAATTACGGCCATTTGTTCGCGAATTTCTCAGGGAGGCGAGCACGATGTTTGACATAACAATATATACCCTAGGGTGTCGTGCATATGCTTGGGATATGTCGAAATTGCTCGATCCTGATGGGATGTATTTCGATAATTGGAGGGTTATTTCAAGGGAGGACTGTGTTGCTTTAGACAAGCACAAGAAGTGTCTGGATGTTGTTTTGGAACACGAACGAGTTGTTGTGGTAATGGATGATAATGAAGCCGTTTGGGAGGATCATAAGACTAACTTGTTTAAAGTAACGCCTTATAATTACTTTTCTTATTTTAGTCCTGAGGATAAAGTTCATGATGCTTCCCCTCCGAGGCTGTCTTGGTCTCAGCTGAATGGGGACGAAAGCGGAGAAAATGGAGTGCTAGCAATGGCTTTAGATAAGCTAAGGCTTGTTCATCAGGCTTTCTTTGATGATAATTCGACTGTCAAGGGGATTGAGGATTATGGTAACAGGGATGTAAGGCAAGTTCTTCAAAGGGTACTGATGAAGCAAAAATCATTGTCTAAGAAGCAAAAGAAACAACAATTGAAGAAGATTAATTATAATGGGTTAGCACGAAATCTACAAGCTGCACATCTTTGA

Coding sequence (CDS)

ATGGAGCAGCAACAACTCGACGAAGAAGCAGGCACAAATTTCAGACTCGATTTATTATCATCATTATTAGGTCAACAAATTGCATCAGGAATTCTAAATTACAACACAATTGATGATGATGATGAAGATCGTGTTCCGAATTCATGCCCCCATCCTGTTTTTATCGGAAATTCGTGCACTAAATGCGGTCAAGAAACAAACGGTACGATTTCTACGATACCCTTTTGGTACATTTACCCTAGATTAAATGTATGTTTGAAGGAGGTTAATCGAATTCGAGATACCAATTTGCAAAGGTTATTATCCCGCAGAAAGCTTCATTTAGTTGTTGATTTGGATCATACGCTTGTTCATACACGGAAGTTGTACAAACTTAGTCCAGAAGATAGGAACTTTCTTCGACTTAGGTCAAAAAGATATGGAGTTGATTATAATTTGGCAGGGGAATTAGGTACATTGTTTCAGGTGGGTGATGGGTGGACGAAATTACGGCCATTTGTTCGCGAATTTCTCAGGGAGGCGAGCACGATGTTTGACATAACAATATATACCCTAGGGTGTCGTGCATATGCTTGGGATATGTCGAAATTGCTCGATCCTGATGGGATGTATTTCGATAATTGGAGGGTTATTTCAAGGGAGGACTGTGTTGCTTTAGACAAGCACAAGAAGTGTCTGGATGTTGTTTTGGAACACGAACGAGTTGTTGTGGTAATGGATGATAATGAAGCCGTTTGGGAGGATCATAAGACTAACTTGTTTAAAGTAACGCCTTATAATTACTTTTCTTATTTTAGTCCTGAGGATAAAGTTCATGATGCTTCCCCTCCGAGGCTGTCTTGGTCTCAGCTGAATGGGGACGAAAGCGGAGAAAATGGAGTGCTAGCAATGGCTTTAGATAAGCTAAGGCTTGTTCATCAGGCTTTCTTTGATGATAATTCGACTGTCAAGGGGATTGAGGATTATGGTAACAGGGATGTAAGGCAAGTTCTTCAAAGGGTACTGATGAAGCAAAAATCATTGTCTAAGAAGCAAAAGAAACAACAATTGAAGAAGATTAATTATAATGGGTTAGCACGAAATCTACAAGCTGCACATCTTTGA

Protein sequence

MEQQQLDEEAGTNFRLDLLSSLLGQQIASGILNYNTIDDDDEDRVPNSCPHPVFIGNSCTKCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRVLMKQKSLSKKQKKQQLKKINYNGLARNLQAAHL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16279.1	Spo16279.1	mRNA

Homology

[Close]

BLAST of Spo16279.1 vs. NCBI nr
Match: gi|902155873|gb|KNA05958.1| (hypothetical protein SOVF_185530 [Spinacia oleracea])

HSP 1 Score: 751.5 bits (1939), Expect = 6.900e-214
Identity = 366/367 (99.73%), Postives = 366/367 (99.73%), Query Frame = 1


		  
Query: 1   MEQQQLDEEAGTNFRLDLLSSLLGQQIASGILNYNTIDDDDEDRVPNSCPHPVFIGNSCT 60
           MEQQQLDEE GTNFRLDLLSSLLGQQIASGILNYNTIDDDDEDRVPNSCPHPVFIGNSCT
Sbjct: 1   MEQQQLDEETGTNFRLDLLSSLLGQQIASGILNYNTIDDDDEDRVPNSCPHPVFIGNSCT 60

Query: 61  KCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTR 120
           KCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTR
Sbjct: 61  KCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTR 120

Query: 121 KLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPFVREFLREASTMFDI 180
           KLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPFVREFLREASTMFDI
Sbjct: 121 KLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPFVREFLREASTMFDI 180

Query: 181 TIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMD 240
           TIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMD
Sbjct: 181 TIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMD 240

Query: 241 DNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALD 300
           DNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALD
Sbjct: 241 DNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALD 300

Query: 301 KLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRVLMKQKSLSKKQKKQQLKKINYNGLAR 360
           KLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRVLMKQKSLSKKQKKQQLKKINYNGLAR
Sbjct: 301 KLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRVLMKQKSLSKKQKKQQLKKINYNGLAR 360

Query: 361 NLQAAHL 368
           NLQAAHL
Sbjct: 361 NLQAAHL 367

[Close]

BLAST of Spo16279.1 vs. NCBI nr
Match: gi|870854583|gb|KMT06338.1| (hypothetical protein BVRB_7g160200 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 295.0 bits (754), Expect = 1.800e-76
Identity = 147/191 (76.96%), Postives = 161/191 (84.29%), Query Frame = 1


		  
Query: 177 MFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLDVVLEHERVV 236
           MFD+TIYTLGCRAYAW  +KLLDP+G YFD WRV+SREDC  LDKHKK LDV+LEHERV+
Sbjct: 1   MFDMTIYTLGCRAYAWSTAKLLDPNGDYFDKWRVVSREDCALLDKHKKFLDVILEHERVI 60

Query: 237 VVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLA 296
           VVMDDNE VWEDHKTNL  + PYN+FSYFSPEDK HDASPPR SWSQLNGDES ENGVLA
Sbjct: 61  VVMDDNETVWEDHKTNLLIIIPYNFFSYFSPEDKDHDASPPRESWSQLNGDESEENGVLA 120

Query: 297 MALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRVLMKQKSLSKKQKKQQLKKINYN 356
            ALDKLR VH AFFDD   VKG +DYGN DVR +LQRVLMKQKS +KKQ K + KKI  +
Sbjct: 121 KALDKLRAVHAAFFDDLG-VKGSKDYGNWDVRDILQRVLMKQKSSTKKQNKHKGKKI--D 180

Query: 357 GLARNLQAAHL 368
           GL+R LQAAHL
Sbjct: 181 GLSRTLQAAHL 188

[Close]

BLAST of Spo16279.1 vs. NCBI nr
Match: gi|586674475|ref|XP_006838087.1| (PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4 [Amborella trichopoda])

HSP 1 Score: 203.4 bits (516), Expect = 7.000e-49
Identity = 123/310 (39.68%), Postives = 180/310 (58.06%), Query Frame = 1


		  
Query: 33  NYNTIDDDDEDRVPNSCP-HPVFIGNSCTKCGQETNGTI-----STIPFWYIYPRLNVCL 92
           N   +D+  E      CP HP F  + C +CG++ +        + + F YI+  L +  
Sbjct: 89  NQGELDNFKESTSEKVCPPHPGFYKDMCIRCGEQKDDETVARKETAVAFNYIHKDLKLGA 148

Query: 93  KEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNL 152
           +EV R+R T+L+ L  RRKL+LV+DLDHTL+++ +L  +SPE+  +L           + 
Sbjct: 149 EEVARLRATDLKNLYRRRKLYLVLDLDHTLLNSTRLVDVSPEEEAYLNATYLNKETSSSN 208

Query: 153 AGELGTLFQVGD--GWTKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMY 212
               GTLF++      TKLRPFVR FL+EA+TMF++ +YT+G RAYA +M+KLLDP G+Y
Sbjct: 209 GDTSGTLFKLEPLHMLTKLRPFVRTFLKEANTMFEMYVYTMGERAYALEMAKLLDPSGVY 268

Query: 213 FDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSY 272
           F + RVIS+ D     +H+K LDVVL  E  VV++DD E VW  HK NL  +  Y++FS 
Sbjct: 269 FGS-RVISQGDSTV--RHQKGLDVVLGSECAVVILDDTEHVWHKHKENLVLMERYHFFSS 328

Query: 273 FSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGN 332
              +  VH       S S+L  DES  +G+LA  L+ L+ +HQ F+          D+  
Sbjct: 329 SCRQFNVH-----YKSLSELKRDESESDGMLASILNVLKHIHQMFYYQEVET----DFNG 386

Query: 333 RDVRQVLQRV 335
            DVR+VL+ +
Sbjct: 389 SDVRKVLKTI 386

[Close]

BLAST of Spo16279.1 vs. NCBI nr
Match: gi|731435243|ref|XP_010645384.1| (PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4 [Vitis vinifera])

HSP 1 Score: 202.6 bits (514), Expect = 1.200e-48
Identity = 118/288 (40.97%), Postives = 175/288 (60.76%), Query Frame = 1


		  
Query: 47  NSCPHPVFIGNSCTKCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKL 106
           ++C HP      C +CGQ+  G  S + F YI+  L +   E+ R+RDT+L+ LL  +KL
Sbjct: 90  DTCTHPGVFRELCIRCGQKMEGG-SGVAFGYIHKDLRLGSDEIARLRDTDLKNLLRHKKL 149

Query: 107 HLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPF 166
           +LV+DLDHTL+++ +L  ++PE+   L L+++   +   L G L  L  +    TKLRP+
Sbjct: 150 YLVLDLDHTLLNSTRLLDITPEE---LYLKNQTDPLQGGLKGNLFMLNTM-HMLTKLRPY 209

Query: 167 VREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCL 226
           V  FL+EAS MF++ IYT+G R+YA +M+KLLDP+ +YF + RVIS+ DC    +H+K L
Sbjct: 210 VHTFLKEASKMFEMYIYTMGERSYALEMAKLLDPERVYFSS-RVISQADCT--QRHQKGL 269

Query: 227 DVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNG 286
           DVVL  E  V+++DD E+VW+ HK NL  +  Y++F+                S S+L  
Sbjct: 270 DVVLGQESAVLILDDTESVWQKHKDNLILMERYHFFA-----SSCRQFGFNCKSLSELKS 329

Query: 287 DESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRV 335
           DES  +G LA  L  L+ +H  FFD        +D+  RDVRQV++RV
Sbjct: 330 DESEPDGALATVLKVLQRIHSMFFDPELG----DDFSGRDVRQVVKRV 360

[Close]

BLAST of Spo16279.1 vs. NCBI nr
Match: gi|731439896|ref|XP_010647279.1| (PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4 [Vitis vinifera])

HSP 1 Score: 202.6 bits (514), Expect = 1.200e-48
Identity = 118/288 (40.97%), Postives = 175/288 (60.76%), Query Frame = 1


		  
Query: 47  NSCPHPVFIGNSCTKCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKL 106
           ++C HP      C +CGQ+  G  S + F YI+  L +   E+ R+RDT+L+ LL  +KL
Sbjct: 98  DTCTHPGVFRELCIRCGQKMEGG-SGVAFGYIHKDLRLGSDEIARLRDTDLKNLLRHKKL 157

Query: 107 HLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPF 166
           +LV+DLDHTL+++ +L  ++PE+   L L+++   +   L G L  L  +    TKLRP+
Sbjct: 158 YLVLDLDHTLLNSTRLLDITPEE---LYLKNQTDPLQGGLKGNLFMLNTM-HMLTKLRPY 217

Query: 167 VREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCL 226
           V  FL+EAS MF++ IYT+G R+YA +M+KLLDP+ +YF + RVIS+ DC    +H+K L
Sbjct: 218 VHTFLKEASKMFEMYIYTMGERSYALEMAKLLDPERVYFSS-RVISQADCT--QRHQKGL 277

Query: 227 DVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNG 286
           DVVL  E  V+++DD E+VW+ HK NL  +  Y++F+                S S+L  
Sbjct: 278 DVVLGQESAVLILDDTESVWQKHKDNLILMERYHFFA-----SSCRQFGFNCKSLSELKS 337

Query: 287 DESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRV 335
           DES  +G LA  L  L+ +H  FFD        +D+  RDVRQV++RV
Sbjct: 338 DESEPDGALATVLKVLQRIHSMFFDPELG----DDFSGRDVRQVVKRV 368

[Close]

BLAST of Spo16279.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QH00_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_185530 PE=4 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 4.800e-214
Identity = 366/367 (99.73%), Postives = 366/367 (99.73%), Query Frame = 1


		  
Query: 1   MEQQQLDEEAGTNFRLDLLSSLLGQQIASGILNYNTIDDDDEDRVPNSCPHPVFIGNSCT 60
           MEQQQLDEE GTNFRLDLLSSLLGQQIASGILNYNTIDDDDEDRVPNSCPHPVFIGNSCT
Sbjct: 1   MEQQQLDEETGTNFRLDLLSSLLGQQIASGILNYNTIDDDDEDRVPNSCPHPVFIGNSCT 60

Query: 61  KCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTR 120
           KCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTR
Sbjct: 61  KCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTR 120

Query: 121 KLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPFVREFLREASTMFDI 180
           KLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPFVREFLREASTMFDI
Sbjct: 121 KLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPFVREFLREASTMFDI 180

Query: 181 TIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMD 240
           TIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMD
Sbjct: 181 TIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMD 240

Query: 241 DNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALD 300
           DNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALD
Sbjct: 241 DNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALD 300

Query: 301 KLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRVLMKQKSLSKKQKKQQLKKINYNGLAR 360
           KLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRVLMKQKSLSKKQKKQQLKKINYNGLAR
Sbjct: 301 KLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRVLMKQKSLSKKQKKQQLKKINYNGLAR 360

Query: 361 NLQAAHL 368
           NLQAAHL
Sbjct: 361 NLQAAHL 367

[Close]

BLAST of Spo16279.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2J4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g160200 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.200e-76
Identity = 147/191 (76.96%), Postives = 161/191 (84.29%), Query Frame = 1


		  
Query: 177 MFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLDVVLEHERVV 236
           MFD+TIYTLGCRAYAW  +KLLDP+G YFD WRV+SREDC  LDKHKK LDV+LEHERV+
Sbjct: 1   MFDMTIYTLGCRAYAWSTAKLLDPNGDYFDKWRVVSREDCALLDKHKKFLDVILEHERVI 60

Query: 237 VVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLA 296
           VVMDDNE VWEDHKTNL  + PYN+FSYFSPEDK HDASPPR SWSQLNGDES ENGVLA
Sbjct: 61  VVMDDNETVWEDHKTNLLIIIPYNFFSYFSPEDKDHDASPPRESWSQLNGDESEENGVLA 120

Query: 297 MALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRVLMKQKSLSKKQKKQQLKKINYN 356
            ALDKLR VH AFFDD   VKG +DYGN DVR +LQRVLMKQKS +KKQ K + KKI  +
Sbjct: 121 KALDKLRAVHAAFFDDLG-VKGSKDYGNWDVRDILQRVLMKQKSSTKKQNKHKGKKI--D 180

Query: 357 GLARNLQAAHL 368
           GL+R LQAAHL
Sbjct: 181 GLSRTLQAAHL 188

[Close]

BLAST of Spo16279.1 vs. UniProtKB/TrEMBL
Match: W1NZC5_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00106p00017820 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.800e-49
Identity = 123/310 (39.68%), Postives = 180/310 (58.06%), Query Frame = 1


		  
Query: 33  NYNTIDDDDEDRVPNSCP-HPVFIGNSCTKCGQETNGTI-----STIPFWYIYPRLNVCL 92
           N   +D+  E      CP HP F  + C +CG++ +        + + F YI+  L +  
Sbjct: 89  NQGELDNFKESTSEKVCPPHPGFYKDMCIRCGEQKDDETVARKETAVAFNYIHKDLKLGA 148

Query: 93  KEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNL 152
           +EV R+R T+L+ L  RRKL+LV+DLDHTL+++ +L  +SPE+  +L           + 
Sbjct: 149 EEVARLRATDLKNLYRRRKLYLVLDLDHTLLNSTRLVDVSPEEEAYLNATYLNKETSSSN 208

Query: 153 AGELGTLFQVGD--GWTKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMY 212
               GTLF++      TKLRPFVR FL+EA+TMF++ +YT+G RAYA +M+KLLDP G+Y
Sbjct: 209 GDTSGTLFKLEPLHMLTKLRPFVRTFLKEANTMFEMYVYTMGERAYALEMAKLLDPSGVY 268

Query: 213 FDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSY 272
           F + RVIS+ D     +H+K LDVVL  E  VV++DD E VW  HK NL  +  Y++FS 
Sbjct: 269 FGS-RVISQGDSTV--RHQKGLDVVLGSECAVVILDDTEHVWHKHKENLVLMERYHFFSS 328

Query: 273 FSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGN 332
              +  VH       S S+L  DES  +G+LA  L+ L+ +HQ F+          D+  
Sbjct: 329 SCRQFNVH-----YKSLSELKRDESESDGMLASILNVLKHIHQMFYYQEVET----DFNG 386

Query: 333 RDVRQVLQRV 335
            DVR+VL+ +
Sbjct: 389 SDVRKVLKTI 386

[Close]

BLAST of Spo16279.1 vs. UniProtKB/TrEMBL
Match: A0A0R0FJQ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G074700 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.100e-48
Identity = 120/288 (41.67%), Postives = 172/288 (59.72%), Query Frame = 1


		  
Query: 49  CPHPVFIGNSCTKCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKLHL 108
           C HP   GN C +CGQ+ +G  S + F YI+  L +  +E++R+R+T+++ LL R+KL+L
Sbjct: 41  CTHPGSFGNMCIRCGQKLDGE-SGVTFGYIHKGLRLHDEEISRLRNTDMKSLLGRKKLYL 100

Query: 109 VVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVG--DGWTKLRPF 168
           V+DLDHTL+++  L +L+ E+ + L        +D +     G+LF++   +  TKLRPF
Sbjct: 101 VLDLDHTLLNSTHLAQLTSEELHLLNQTDSLTMIDVSK----GSLFKLEHMNMMTKLRPF 160

Query: 169 VREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCL 228
           VR FL+EAS MF++ IYT+G R YA +M+KLLDP G YF N +VISR+D     KH+K L
Sbjct: 161 VRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYF-NAKVISRDD--GTQKHQKGL 220

Query: 229 DVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNG 288
           DVVL  E  V+++DD E  W  HK NL  +  Y++F                 S ++L  
Sbjct: 221 DVVLGQESAVIILDDTEHAWMKHKDNLILMERYHFFG-----SSCRQFGFNCKSLAELKS 280

Query: 289 DESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRV 335
           DE   +G LA  L  L+ VH  FFD        ED+ ++DVRQVL  V
Sbjct: 281 DEDETDGALAKILKVLKQVHCMFFDKQ------EDFDDQDVRQVLSSV 309

[Close]

BLAST of Spo16279.1 vs. UniProtKB/TrEMBL
Match: K7MKD8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G074700 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.100e-48
Identity = 120/288 (41.67%), Postives = 172/288 (59.72%), Query Frame = 1


		  
Query: 49  CPHPVFIGNSCTKCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRDTNLQRLLSRRKLHL 108
           C HP   GN C +CGQ+ +G  S + F YI+  L +  +E++R+R+T+++ LL R+KL+L
Sbjct: 84  CTHPGSFGNMCIRCGQKLDGE-SGVTFGYIHKGLRLHDEEISRLRNTDMKSLLGRKKLYL 143

Query: 109 VVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVG--DGWTKLRPF 168
           V+DLDHTL+++  L +L+ E+ + L        +D +     G+LF++   +  TKLRPF
Sbjct: 144 VLDLDHTLLNSTHLAQLTSEELHLLNQTDSLTMIDVSK----GSLFKLEHMNMMTKLRPF 203

Query: 169 VREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCL 228
           VR FL+EAS MF++ IYT+G R YA +M+KLLDP G YF N +VISR+D     KH+K L
Sbjct: 204 VRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYF-NAKVISRDD--GTQKHQKGL 263

Query: 229 DVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNG 288
           DVVL  E  V+++DD E  W  HK NL  +  Y++F                 S ++L  
Sbjct: 264 DVVLGQESAVIILDDTEHAWMKHKDNLILMERYHFFG-----SSCRQFGFNCKSLAELKS 323

Query: 289 DESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRV 335
           DE   +G LA  L  L+ VH  FFD        ED+ ++DVRQVL  V
Sbjct: 324 DEDETDGALAKILKVLKQVHCMFFDKQ------EDFDDQDVRQVLSSV 352

[Close]

BLAST of Spo16279.1 vs. ExPASy Swiss-Prot
Match: CPL4_ARATH (RNA polymerase II C-terminal domain phosphatase-like 4 OS=Arabidopsis thaliana GN=CPL4 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.500e-47
Identity = 118/308 (38.31%), Postives = 167/308 (54.22%), Query Frame = 1


		  
Query: 27  IASGILNYNTIDDDDEDRVPNSCPHPVFIGNSCTKCGQETNGTISTIPFWYIYPRLNVCL 86
           + SG+        ++       C HP   GN C  CGQ+   T   + F YI+  + +  
Sbjct: 46  VESGLKRQKLEHLEEASSSKGECEHPGSFGNMCFVCGQKLEET--GVSFRYIHKEMRLNE 105

Query: 87  KEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNL 146
            E++R+RD++ + L  +RKL+LV+DLDHTL++T  L  L PE+  +L+  +       N+
Sbjct: 106 DEISRLRDSDSRFLQRQRKLYLVLDLDHTLLNTTILRDLKPEEE-YLKSHTHSLQDGCNV 165

Query: 147 AGELGTLFQVGDGWTKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFD 206
           +G    L +     TKLRPFV  FL+EAS MF + IYT+G R YA  M+KLLDP G YF 
Sbjct: 166 SGGSLFLLEFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFG 225

Query: 207 NWRVISREDCVALDKHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFS 266
           + RVISR+D     +H+K LDVVL  E  V+++DD E  W  HK NL  +  Y++FS   
Sbjct: 226 D-RVISRDDGTV--RHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFS--- 285

Query: 267 PEDKVHDASPPRLSWSQLNGDESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRD 326
                        S S+L  DES  +G LA  L  L+  H  FF++       E   NRD
Sbjct: 286 --SSCRQFDHRYKSLSELKSDESEPDGALATVLKVLKQAHALFFENVD-----EGISNRD 337

Query: 327 VRQVLQRV 335
           VR +L++V
Sbjct: 346 VRLMLKQV 337

[Close]

BLAST of Spo16279.1 vs. ExPASy Swiss-Prot
Match: CPL3_ARATH (RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis thaliana GN=CPL3 PE=1 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 5.400e-25
Identity = 85/240 (35.42%), Postives = 129/240 (53.75%), Query Frame = 1


		  
Query: 81   RLNVCLKEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRY 140
            R+ +  + V R+ + N  ++ + +KL LV+D+DHTL+++ K  ++  E R+   LR K  
Sbjct: 905  RVAIQRERVRRLEEQN--KMFASQKLSLVLDIDHTLLNSAKFNEV--ESRHEEILRKKEE 964

Query: 141  GVDYNLAGELGTLFQVGDGWTKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDP 200
                     L     +G  WTKLRP +  FL +AS ++++ +YT+G + YA +M+KLLDP
Sbjct: 965  QDREKPYRHLFRFLHMGM-WTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKLLDP 1024

Query: 201  DGMYFDNWRVISR-EDCVALD-----KHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLF 260
             G+ F N RVIS+ +D   LD        K L+ V+  E  VV++DD+  VW  HK NL 
Sbjct: 1025 KGVLF-NGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVWPQHKMNLI 1084

Query: 261  KVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGDESGENGVLAMALDKLRLVHQAFFDDNS 315
             V  Y YF     +  +    P  L   +L+ DE  E G LA +L  +  +HQ FF   S
Sbjct: 1085 AVERYLYFPCSRRQFGL--LGPSLL---ELDRDEVPEEGTLASSLAVIEKIHQNFFSHTS 1133

[Close]

BLAST of Spo16279.1 vs. ExPASy Swiss-Prot
Match: FCP1_SCHPO (RNA polymerase II subunit A C-terminal domain phosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fcp1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.200e-21
Identity = 73/228 (32.02%), Postives = 115/228 (50.44%), Query Frame = 1


		  
Query: 49  CPHPVFIGNSCTKCGQETNG---------TISTIPFWYIYPRLNVCLKEVNRIRDTNLQR 108
           C H V  G  C  CG+               + I   +    L V L+E +R+   N++R
Sbjct: 99  CTHEVNYGGLCAICGKNITSQDYMGYSDMARANISMTHNTGDLTVSLEEASRLESENVKR 158

Query: 109 LLSRRKLHLVVDLDHTLVH-----TRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLF 168
           L   ++L L+VDLD T++H     T   +   P + N+  LR  R    +NL  + G   
Sbjct: 159 LRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVR---SFNL--QEGPSG 218

Query: 169 QVGDGWTKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISRE 228
                + K RP + +FL++ S ++++ IYT+G +AYA +++K++DP G  F + RV+SR+
Sbjct: 219 YTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQD-RVLSRD 278

Query: 229 DCVALDKHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYF 263
           D  +L   K    +      +VVV+DD   VW D   NL KV PY +F
Sbjct: 279 DSGSL-AQKSLRRLFPCDTSMVVVIDDRGDVW-DWNPNLIKVVPYEFF 318

[Close]

BLAST of Spo16279.1 vs. ExPASy Swiss-Prot
Match: FCP1_YEAST (RNA polymerase II subunit A C-terminal domain phosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FCP1 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.000e-20
Identity = 74/240 (30.83%), Postives = 121/240 (50.42%), Query Frame = 1


		  
Query: 45  VPNSCPHPVFIGNSCTKCGQETNG-TISTIPFWYIYPRLNVCLKEVNRIRDTNL--QRLL 104
           +   C H +  G  CT+CG+E +      +P   +   +++ + E   IR      + L 
Sbjct: 112 IKRPCNHDIVYGGLCTQCGKEVSADAFDGVPL-DVVGDVDLQISETEAIRTGKALKEHLR 171

Query: 105 SRRKLHLVVDLDHTLVH-----TRKLYKLSPEDRNFLRLRS-KRYGVDYNLAGELGTLFQ 164
             +KL LVVDLD T++H     T   +K  P + NF  LR  K + +D  L   L  ++ 
Sbjct: 172 RDKKLILVVDLDQTIIHCGVDPTIAEWKNDPNNPNFETLRDVKSFTLDEELV--LPLMYM 231

Query: 165 VGDG-------------WTKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDG 224
             DG             + K+RP ++EF  + + +F++ IYT+  RAYA  ++K++DP G
Sbjct: 232 NDDGSMLRPPPVRKCWYYVKVRPGLKEFFAKVAPLFEMHIYTMATRAYALQIAKIVDPTG 291

Query: 225 MYFDNWRVISREDCVALDKHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYF 263
             F + R++SR++  +L   K    +    + +VVV+DD   VW +   NL KV PYN+F
Sbjct: 292 ELFGD-RILSRDENGSLTT-KSLAKLFPTDQSMVVVIDDRGDVW-NWCPNLIKVVPYNFF 345

[Close]

BLAST of Spo16279.1 vs. ExPASy Swiss-Prot
Match: CTDP1_MOUSE (RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus musculus GN=Ctdp1 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.400e-19
Identity = 65/231 (28.14%), Postives = 111/231 (48.05%), Query Frame = 1


		  
Query: 49  CPHPVFIGNSCTKCGQET------NG------TISTIPFWYIYPRLNVCLKEVNRIRDTN 108
           C HPV +   C +CGQ+       NG      + +T+   +  P L V  ++  ++   +
Sbjct: 114 CSHPVVMKGLCAECGQDLTQLQSKNGRQQVPLSTATVSMVHSVPELMVSSEQAEKLGRED 173

Query: 109 LQRLLSRRKLHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQV 168
            QRL   RKL L+VDLD TL+HT + +     ++                       FQ+
Sbjct: 174 QQRLHRNRKLVLMVDLDQTLIHTTEQHCPQMSNKGIFH-------------------FQL 233

Query: 169 GDG----WTKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVIS 228
           G G     T+LRP  ++FL + + ++++ ++T G R YA  ++  LDP+   F + R++S
Sbjct: 234 GRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSH-RILS 293

Query: 229 REDCV-ALDKHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYF 263
           R++C+    K     ++    + +V ++DD E VW+    NL  V  Y YF
Sbjct: 294 RDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWK-FAPNLITVKKYVYF 323

[Close]

BLAST of Spo16279.1 vs. TAIR (Arabidopsis)
Match: AT5G58003.1 (C-terminal domain phosphatase-like 4)

HSP 1 Score: 189.5 bits (480), Expect = 3.700e-48
Identity = 118/308 (38.31%), Postives = 167/308 (54.22%), Query Frame = 1


		  
Query: 27  IASGILNYNTIDDDDEDRVPNSCPHPVFIGNSCTKCGQETNGTISTIPFWYIYPRLNVCL 86
           + SG+        ++       C HP   GN C  CGQ+   T   + F YI+  + +  
Sbjct: 46  VESGLKRQKLEHLEEASSSKGECEHPGSFGNMCFVCGQKLEET--GVSFRYIHKEMRLNE 105

Query: 87  KEVNRIRDTNLQRLLSRRKLHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNL 146
            E++R+RD++ + L  +RKL+LV+DLDHTL++T  L  L PE+  +L+  +       N+
Sbjct: 106 DEISRLRDSDSRFLQRQRKLYLVLDLDHTLLNTTILRDLKPEEE-YLKSHTHSLQDGCNV 165

Query: 147 AGELGTLFQVGDGWTKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFD 206
           +G    L +     TKLRPFV  FL+EAS MF + IYT+G R YA  M+KLLDP G YF 
Sbjct: 166 SGGSLFLLEFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFG 225

Query: 207 NWRVISREDCVALDKHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFS 266
           + RVISR+D     +H+K LDVVL  E  V+++DD E  W  HK NL  +  Y++FS   
Sbjct: 226 D-RVISRDDGTV--RHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFS--- 285

Query: 267 PEDKVHDASPPRLSWSQLNGDESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRD 326
                        S S+L  DES  +G LA  L  L+  H  FF++       E   NRD
Sbjct: 286 --SSCRQFDHRYKSLSELKSDESEPDGALATVLKVLKQAHALFFENVD-----EGISNRD 337

Query: 327 VRQVLQRV 335
           VR +L++V
Sbjct: 346 VRLMLKQV 337

[Close]

BLAST of Spo16279.1 vs. TAIR (Arabidopsis)
Match: AT3G19595.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.800e-34
Identity = 104/292 (35.62%), Postives = 149/292 (51.03%), Query Frame = 1


		  
Query: 47  NSCPHPVFIGNSCTKCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRD-TNLQRLLSRRK 106
           +SC H       C  C + T        F YI+  L +  + V   +  T     L+ +K
Sbjct: 33  SSCGHWYICHGICIGC-KSTVKKSQGRAFDYIFDGLQLSHEAVALTKCFTTKLSCLNEKK 92

Query: 107 LHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGW---TK 166
           LHLV+DLDHTL+HT  +  LS  ++  +         D      L  +  VGD     TK
Sbjct: 93  LHLVLDLDHTLLHTVMVPSLSQAEKYLIEEAGSATRDD------LWKIKAVGDPMEFLTK 152

Query: 167 LRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKH 226
           LRPF+R+FL+EA+  F + +YT G R YA  + +L+DP  +YF + RVI++ +      H
Sbjct: 153 LRPFLRDFLKEANEFFTMYVYTKGSRVYAKQVLELIDPKKLYFGD-RVITKTE----SPH 212

Query: 227 KKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWS 286
            K LD VL  ER VV++DD   VW DHK+NL  ++ Y+YF       K  D+ P    +S
Sbjct: 213 MKTLDFVLAEERGVVIVDDTRNVWPDHKSNLVDISKYSYFRL-----KGQDSMP----YS 272

Query: 287 QLNGDESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQRV 335
           +   DES   G LA  L  L+ VHQ FF      +  E+  ++DVR +LQ +
Sbjct: 273 EEKTDESESEGGLANVLKLLKEVHQRFF------RVEEELESKDVRSLLQEI 297

[Close]

BLAST of Spo16279.1 vs. TAIR (Arabidopsis)
Match: AT5G54210.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 6.700e-34
Identity = 89/228 (39.04%), Postives = 131/228 (57.46%), Query Frame = 1


		  
Query: 104 RKLHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKL 163
           +KLHLV+DLDHTL+HT  +  L+ E+   +     R  +   L G   + F +     KL
Sbjct: 87  KKLHLVLDLDHTLLHTVMISNLTKEETYLIEEEDSREDLR-RLNGGYSSEFLI-----KL 146

Query: 164 RPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHK 223
           RPFV EFL+EA+ MF + +YT+G R YA ++  L+DP+ +YF + RVI+R +      + 
Sbjct: 147 RPFVHEFLKEANKMFSMYVYTMGDRDYAMNVLNLIDPEKVYFGD-RVITRNE----SPYI 206

Query: 224 KCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQ 283
           K LD+VL  E  VV++DD   VW DHK NL ++T YNYFS     DK         S+++
Sbjct: 207 KTLDLVLADECGVVIVDDTPHVWPDHKRNLLEITKYNYFS-----DKTRHDVKYTKSYAE 266

Query: 284 LNGDESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVL 332
              DES  +G LA  L  ++ V++ FF  +  V+   D  ++DVR +L
Sbjct: 267 EKRDESRNDGSLANVLKVIKQVYEGFF--SGGVEKDLDIDSKDVRLLL 296

[Close]

BLAST of Spo16279.1 vs. TAIR (Arabidopsis)
Match: AT1G20320.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 4.300e-33
Identity = 92/232 (39.66%), Postives = 134/232 (57.76%), Query Frame = 1


		  
Query: 101 LSRRKLHLVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGW 160
           L+ RKLHLV+DLDHTL+H+  + +LS  ++  L         + +   +L TL +  +  
Sbjct: 72  LNERKLHLVLDLDHTLLHSIMISRLSEGEKYLLG--------ESDFREDLWTLDR--EML 131

Query: 161 TKLRPFVREFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALD 220
            KLRPFV EFL+EA+ +F + +YT+G R YA  + K +DP  +YF + RVI+R++     
Sbjct: 132 IKLRPFVHEFLKEANEIFSMYVYTMGNRDYAQAVLKWIDPKKVYFGD-RVITRDE----S 191

Query: 221 KHKKCLDVVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLS 280
              K LD+VL  E  VV++DD   VW DH+ NL ++T Y+YF  +S     HD      S
Sbjct: 192 GFSKTLDLVLADECGVVIVDDTRHVWPDHERNLLQITKYSYFRDYS-----HDKESK--S 251

Query: 281 WSQLNGDESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQ 333
           +++   DES   G LA  L  L+ VHQ FF       GIE+  ++DVR +LQ
Sbjct: 252 YAEEKRDESRNQGSLANVLKVLKDVHQEFFRG-----GIEELDSKDVRLLLQ 276

[Close]

BLAST of Spo16279.1 vs. TAIR (Arabidopsis)
Match: AT2G04930.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 5.700e-33
Identity = 96/285 (33.68%), Postives = 145/285 (50.88%), Query Frame = 1


		  
Query: 49  CPHPVFIGNSCTKCGQETNGTISTIPFWYIYPRLNVCLKEVNRIRD-TNLQRLLSRRKLH 108
           C H       C  C  + + +     F YI+  L +  + V   +  T     L+ +KLH
Sbjct: 10  CGHWYVFQGICIGCKSKVHKS-QFRKFDYIFKGLQLSNEAVALTKSLTTKHSCLNEKKLH 69

Query: 109 LVVDLDHTLVHTRKLYKLSPEDRNFLRLRSKRYGVDYNLAGELGTLFQVGDGWTKLRPFV 168
           LV+DLDHTL+H++ +  LS  +R  ++  S R   D      +G      D   KLRPFV
Sbjct: 70  LVLDLDHTLLHSKLVSNLSQAERYLIQEASSRTREDLWKFRPIGHPI---DRLIKLRPFV 129

Query: 169 REFLREASTMFDITIYTLGCRAYAWDMSKLLDPDGMYFDNWRVISREDCVALDKHKKCLD 228
           R+FL+EA+ MF + +YT+G R YA  + +++DP  +YF N RVI++++        K L+
Sbjct: 130 RDFLKEANEMFTMFVYTMGSRIYAKAILEMIDPKKLYFGN-RVITKDE----SPRMKTLN 189

Query: 229 VVLEHERVVVVMDDNEAVWEDHKTNLFKVTPYNYFSYFSPEDKVHDASPPRLSWSQLNGD 288
           +VL  ER VV++DD   +W  HK NL ++  Y YF     +           S+S+   D
Sbjct: 190 LVLAEERGVVIVDDTRDIWPHHKNNLIQIRKYKYFRRSGLDSN---------SYSEKKTD 249

Query: 289 ESGENGVLAMALDKLRLVHQAFFDDNSTVKGIEDYGNRDVRQVLQ 333
           E   +G LA  L  LR VH+ FF     V+  E   + DVR +L+
Sbjct: 250 EGENDGGLANVLKLLREVHRRFF----IVEVEEVLESMDVRSLLK 272

The following BLAST results are available for this feature:

BLAST of Spo16279.1 vs. NCBI nr
BLAST of Spo16279.1 vs. UniProtKB/TrEMBL
BLAST of Spo16279.1 vs. ExPASy Swiss-Prot
BLAST of Spo16279.1 vs. TAIR (Arabidopsis)

BLAST of Spo16279.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902155873\|gb\|KNA05958.1\|	6.9e-214	99.7	hypothetical protein SOVF_1855...	[more]
gi\|870854583\|gb\|KMT06338.1\|	1.8e-76	76.9	hypothetical protein BVRB_7g16...	[more]
gi\|586674475\|ref\|XP_006838087.1\|	7.0e-49	39.6	PREDICTED: RNA polymerase II C...	[more]
gi\|731435243\|ref\|XP_010645384.1\|	1.2e-48	40.9	PREDICTED: RNA polymerase II C...	[more]
gi\|731439896\|ref\|XP_010647279.1\|	1.2e-48	40.9	PREDICTED: RNA polymerase II C...	[more]

BLAST of Spo16279.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QH00_SPIOL	4.8e-214	99.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8C2J4_BETVU	1.2e-76	76.9	Uncharacterized protein OS=Bet...	[more]
W1NZC5_AMBTC	4.8e-49	39.6	Uncharacterized protein OS=Amb...	[more]
A0A0R0FJQ9_SOYBN	1.1e-48	41.6	Uncharacterized protein OS=Gly...	[more]
K7MKD8_SOYBN	1.1e-48	41.6	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo16279.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CPL4_ARATH	6.5e-47	38.3	RNA polymerase II C-terminal d...	[more]
CPL3_ARATH	5.4e-25	35.4	RNA polymerase II C-terminal d...	[more]
FCP1_SCHPO	1.2e-21	32.0	RNA polymerase II subunit A C-...	[more]
FCP1_YEAST	1.0e-20	30.8	RNA polymerase II subunit A C-...	[more]
CTDP1_MOUSE	3.4e-19	28.1	RNA polymerase II subunit A C-...	[more]

BLAST of Spo16279.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G58003.1	3.7e-48	38.3	C-terminal domain phosphatase-...	[more]
AT3G19595.1	1.8e-34	35.6	Haloacid dehalogenase-like hyd...	[more]
AT5G54210.1	6.7e-34	39.0	Haloacid dehalogenase-like hyd...	[more]
AT1G20320.1	4.3e-33	39.6	Haloacid dehalogenase-like hyd...	[more]
AT2G04930.1	5.7e-33	33.6	Haloacid dehalogenase-like hyd...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004274	FCP1 homology domain	PFAM	PF03031	NIF	coord: 107..269 score: 4.5
IPR004274	FCP1 homology domain	SMART	SM00577	forpap2	coord: 104..266 score: 1.7
IPR004274	FCP1 homology domain	PROFILE	PS50969	FCP1	coord: 101..281 score: 26
IPR011947	FCP1-like phosphatase, phosphatase domain	TIGRFAMs	TIGR02250	TIGR02250	coord: 101..262 score: 4.5
IPR023214	HAD-like domain	GENE3D	3.40.50.1000		coord: 96..290 score: 1.7
IPR023214	HAD-like domain	unknown	SSF56784	HAD-like	coord: 97..262 score: 2.1
None	No IPR available	PANTHER	PTHR23081	RNA POLYMERASE II CTD PHOSPHATASE	coord: 31..334 score: 5.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19699	0.65	Barchart \| Table