Spo16311 (gene)

Overview
NameSpo16311
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRNA-binding family protein
Locationchr3 : 32848762 .. 32858050 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAGGTTTAGCCGAGCCGTAAATAGCGTCCCTAGCCCAAAAGGATGTTGTGTTTTAAACAAAGCCCATAAATTTGGTTAAAACAACACAAGTCACAGGAATCCTTCTAAAAGTGCGGTCTGCCAAAACTGTGGAAGCAACAACACTGAATTGAATTGTTCTCTATCCTCAAACGTCATACTCTGCCGCCGACTGCAGTGCCACCCCCCCCAACACTCTAGCGAAAAAGATGGAGGATATGAAGAAAAGAAAGCTTGATGAAGTTGAAAATGGTCTAATTTCTCCGGCTTCAGGTGAAAGGCTGCGTTCTTTGCTTGAACCGCTTGCTAAACCCCAGTTGGTTGATCTCCTTGTTAAGCTGTATGGCTCTTTTTACTCATTTTAATTTTCTTTCCATTTTTATTACTTGGGGTTTTGTTTCGTCTTGTTCTTGTTCTTGTTCTTGTTAAGCTTGATGAATAATGATGTGATTCCACTTATTGGGATATCACCCCTGAGCCACTACCGACTAAGCTATTTGAAATCCGGAACATAATACCATAGTTTAAGTATGCAAATGTACAGGGTTTTATTTGGTTGTGAAAAGATTAAATACGTTTAAGTTATAGGCTTATAGCATATTAGGGTAATAGGGCAGTGGTTTAATCTCTGGTACTTCTTTGGAGTTGGAACAACGCTTATTATGTCATATGATGAATTAATGTAATAAAATGGTGGATTCTTTTCTGAAATTAATGAGCGGTTTCGTGTTTGGATGCTGTGGAATATTTTAAGCGCTCATCTTAACCTTATCTAAAGATTTTAAGTGCAAGCCAAATTTTAGAACTCAGTCAGTTATCTATAGTTGTGGGATGTATATTGGATAGTAGGCTACCTGTCAAGAGCCAAATTTTAGGTTAAGCCATTTTGTCATTTTCTTTTCTAGATCTTTGCTGCGAAATTGGTAATAATTTGGTTCTTTTTCTGCTCGCGTTATCCGATCTTTCTAGACTTCAGAAGAGGAAATAGGAATTAATTTGTAAAATTAAGATTACATTGCTAGCATAATGTAGTACGGCTAAATTATTCATGAGGGTGTGAGCCAAAGGTGGCTTCGAAGTTATGTTAGATGTGCATCACAAGTAGTTGTATGAAGCCATCATAGCCAAGCAAAACAATAGATTTACCACATGGTTAGAAAGCTTTGAAGAATTTATGTTCATATAGGATGAAGATTGAGGGGAGTAATCCTTAACTTTGTTATAAATCTATACTTATGTTAGCTATAGAGGTTTTAATCAAAGAGAGGGCAATTGCTTTTTGCAGGAAATATCGTTACTCAGTGGTGAATATATCTTGACTTTGAGTTATCTTTAGTTAAGCTGCTACCTTGAATTTGCATATTCATTAGCTTGACTTAAAGGCAATACTTTCATGGGTTTTTAAAGAATAGATCTACATGGAGTAGATTGAGGCAACAAAATTCTTATATGTAGATTGCAGGGAAGTTTGTTGGGATTGAAACAGACCTCGAGGAAATGGTACAAGATGTTTGTTTCGTACATAGTCAATCCTGGTTGTATGCAGAATAACACTGATGAATTAAGCTCACTTGAAAATTCTACAGATTCTCCTATATTTTAATGGTTATGATACTTGAAGATAGCTGATTTAAGGACAGAAATGATTTAATAGTTGGATGTCATGTTTAATGGTCCCGATACTTGGTATAGATATTTTATATGAACAATGAAAATACTAGAAATGGACGCGTATTGAGATGGAGAGAGCTAAATGCAAGGGTTGACACAAGATAAGTGTATTGCAAAGCTACTTTAAATTCGATAAATAAAGGAAAGTTAAATTGGTTTTACCTGGTACTTATTATGGAATGTGTGTGATCAAGTAATTGAAATACATCTGAAGGAAGTTAAAGTTTGCAGACCTCGAATGTTCAATTCCTTTACTAGGTGCTATCATAATTGATAACTCGAATTGTTTGTATTGATCTTATTGCTTGAAAATTGACTCTATCTATGCCAATCTCCACCTTGTCCTCCTAGATTCATTTTCTAGCATGGAACAAGATTTTGTGTGTGTACAATTTGAGGTAGCTATAGCCTACAGGTTCCTTGTTCAATGCATCACTTTACTATCATATTATACCGTAGATTGATGCTTATTAAATGCCTTCAGTTCTTTTGGTGTGTAACCTGTGTATGGTAAGAAATATTGATCAAGCCAATCCAGGACTAATTTCCTGTGCCAGTAAAAGGAAGTCTTACGTCTATACTTATAGTTGAGTGTAATAAATTGACTCTGTGCATGTGTGTTTGCCTGCATGTGTGGCGTGAAGAGGGTCCACATATTCTCCAGTTGCAGGAGAAATTATGAGTCTTGCAAGTGCTGATCCTGTTCACAGAAAGCTATTTGTTCGTGGCTTGGCATGGAATACTACATCAGAAACCTTGTGTGCTGTGAGTGCATTGTCTGATTGCTGATCAGTTTTGTGTGTCATATTGGGTGATTGTGTATTTGTTTGAAGTGGATTAAAACATTTGGATGACATGCTTTTAGGTATCATGTTTCATTTAGTTCTGCTGCATGTAGTTTAGCTAAACTCAAAATTCTCTCTTTCAGGCTTTCATAGGGCATGGAGAAATTGAGGAAGGTGCTGTGATCACTGACAAAGCAACTGGCAAGTCCCGCGGTTATGGCTTTATTACTTATAAAAATATGGATTCGGCTCAGGATGCTCTTAAAGCATCTAGCAAATTAATCGATGTGAGTATGCCATTTCTGGTTTCCTATTTTTGGTTGATAACTTTTTATTTTGGAACTAGGAGGGCTGTTCGCTACCCGGTTTGGTGCCATTTGGCACCCAAACTAACCGCGAAATTTGAATTTGATCCATCCATATAAAACCAAACTGCACCACCAAAAAAAACCCATACCAAACCGTAAAATATTGTTTTGTGCAATGTGTTTGCGGTTTAACCACATTGAAGAAAAAAATCGCAAAAAAATAACGTCTTTGAGAATTTCTTTTCATTTGGTGGCCATTATAAATTTATAATGGATGTTTGAGTAACTTGTAACCCTAGATCTATTGTTGGTTCTTTTTTATTATTCTTTAATAAAACAAAATGATAAAAAAATGGCTTATGGTTTAATATCCTTTCTGGTTTGAACCATAAAAACGACGTTAAGTTGCGGTTTGTGCTGTAGTTTGTTTCATAATTTTCCTAAAACCGCATACTACGGTATCGTCAAAACTCCAAACCTTACCGCAGTTTTCAAATTGCAACCACAAGAAGCTGCGAAAAAAAAGCTTGGTTTGCGGTTTAGACCGCACTCCGAACAAAACTATTTGGTGTTGTGGTTTGGCAAACTTGAATATGATGGTTTTGATGGGAATTTATTTGCTTAGGGCTCGTTCGGTATCTTTTTTGTTTCTATTTTTCTGTTTTTTATAATATAAAAACCAAAATAGGAAAACCACAAAAGTTGTTTCCATTTTTTGTTGTCAGTTTCTAAAATCAACATGAACACTATCGGTATGAGTAATTTTTAGTACATGATTCAATCTAAATCTAATGACTTCCAAAACCTAAAACTGGAAACTGCTAGTGATACCGAACGAGGGCTTAAATATTTATACAAAAACATGAACTAGAAGACCCAACAATATAGGGCATCATTTTCAAGTTGGTACTTGGAAGTGGTTTTACCAAGCTGTTTTTACGTATCTTGATATAAGAAATTACCTAATACTAGTAGTACTTAGTGTAGTTGGTACTTGGTAGTGGTAGAAGTTCAACCTGATGCAGTTCTTGGAGATTGGATTTCCCTTATCCTTTCCCCTCCATTTGCTAGGGCCTAACGTGCAAAGCAGTCTTCCTGATAGAGGTCCTGGGCCACAAGGGTCTTTTACCTTGATAAATTTTAATGAAACTTCATAACTTCAGATATTACCAGATGCATCATCCATTGGCATGTAAAGAGTATTAGCTACTCTGTATTAAGAAATCTTTGAAGGCCCTCAAGGGTAGGGTGTTACTTGGTTTGTAACATGAACTTGCCAAATAGTACAAATTTGTTACTTATTGCTTGCAGTTTTGAATTTATTACACATGTAGAGGATTTATGTTGTACATTTTTCAACCTCTCTTTTTTCTCTCCTGCTTGCCATTACTCTAGGGTCGCTTGACTGTCTGCAACCTAGCATGTGAAGGCTTAAGCAGTGCAAGCACTGCACCTGATCAAGCACAGCGGAAACTTTACATAGGAGGCTTGTCACCAGAAATCACTACTGAGATGTTGCTTAGTTTTTTCAGCAGGCATGGTGAGATAGATGAAGGTTCTGTTGCATATGACAAAGATACAAACAAGTCTCGGTATTCTTCATTTATATATCTTTTTCTTACAGAGCAGTTACTATACTGTAGGCTCCAGTTTCCTACATACTTAAACCAGTTTTTGTCTTTCTGTAGTGGTTTTGGGTTTGTTACATACAAGACAGTTGACTCTGCGAAGAAGGCCCTTGATGACCCAGAGAGAACCCTAGGGGTAATTGATTTCTGAAAGTCTCATGTCATTTTTATGTTTGCTTTTATGCTCTAAAAGCACGAGATTCCGGATGCGTTTTGGTAATGGCTGAAGCATGTAGGGCTGTAGTAGCATCATATCATAAGCATTTACTTGTTTTCTTTGCTTAATGCGCTTTTACTCTATTCTGTGGTTGCCCCCTTATTACCTTTTCAATCTTAGATATAGGATTTTATGTTGGAAAAGCTCTTTTGAGCATAGATAGTCAATCTGTTTCACACACATTAAGGTATCCATGACTGTCGCGCATCTTAGTTTGATCGGGGTGGCAGTTGATCTATAAATTAATGTAGTCAGGTTGAAAGAGGTAAGCTAGGACTTCTTTTCCGGTGGAAATTGAGCTAACTGATACATTCATGACCAGTTTGCACTTGGTAGTAGCTGATTGCAGGTCCATGAGAGGTAGGTAGTATACTAACTAGATATGGTAAACCAGGATCTCTTTCGTGACAAGTGTGCTAACTAATAGTCATGATCAGTTCGCACTGATATTTGGGTGACCGGATAAAATCTTCAAGGCACGAGATATCACACTTTCCTAATAGTAGTTTATCGACCCACAAAGGAACAATCGGGTTCACGATAACACTATTTAGATGCAATGAAGATGAAATTGATTTTGTGTGTTCTCACAAGAATCAATACAACAAGGGTTTGTGTTTTTGACTTAAATGTCTCACTTTAGAAGAAAGATTTGCAAGAAGTTTTCTCAAAGTATGCAAGTATGAATGATGTATTCACCATCTATCAAATGTGTCATGAAATCTCTATATATAGAGTCCATTATGAAGAGTCATCGTTGGAAATAATATCCAACGGTTATGTCCAAAGCAACCGTCATAAAACTGTCCTAAAAGGACGTTTTTGACTCGGCTCGATTGGGCGCGCGTACCAGCTATCAATCTCATAAATCTGCCCGATAGGTGGAGTTCGCCCAATCGAGTGCGAGTACAAGGTACAAGATTATATCCGAAAAGGACCACTCGCTGACTCGCCTTGTCGGGCGATTTTTGCCCGATCGGGCGCGCATACGAAACTCAATAAATTGAGTTTTATTTCAAACCATGTGTGAAGGCCCGACCAGGCCAATTCCGCCTGAGAGGTCCTGGCAAACCACACACCATTTTAACTTCCTTAATCTTGTCCCTTTAACTTATTTGCTTTGAACCAACTCAAGTATAAACATTATACTAATCCTCCTCAAACTCCTAGTGTAATACACACTTCATATTTAACATATAAACCAATTAGCAAATTGTAGATCCATGAACCCCCCTGAGAGGTAGGTAGTATACTGACAAGATATGGTAAACCAGGACCTGTTTCCAGTGAAAAGTGTGTTAACTAATAGAGTCATGATCAGTTCGCACTTGGTAGTAGGTGATAACAGGTCCTTGTAACCCCGGGGGGGTAGGTAGTGTACTAACTAGAGATACTAATTTCTCTTGTTTGGGCCAAACCATGTTTGATTCAACAGATAATTTACACTGTGTATATTGATGGCTTGATGCGGATTTCACATATTTGCTTTTTGCTGGTTGAGTGGTGTATGGGTTAGACTTGTTATATGCCATTGGTGTTTGGCTAATAAAGCTTTCGCTTCCTTACATTAGCATTATATTTTTCCATCACCCTATTGTGTGTCATCTTTGAGTTATATCCTTGGGTTAACTGTCGTGAACCGTGTAGTAAGAGAGCTTCTGGGATTCAACATTCCGGGTTGTCGTCTGTCTAGCACGCACTTGATTCTCTTTTCTTCCTTACCTCTCAAGCTCGGTGAGGTCACGGGTCAGCTGACTATTCAGCTTACAGAGTAATGGGTTGGGGTCCCTAAGCGTGGGACGATTGGGATCAATGCTGGATCAAATTGGGTCAGAATGCTGCTTAACTCGTCTAACTCAGGAACCTGTACTGACTCATCATTCTGACCATGCTATGAGAAGAACCATATACCAGATTTAGGGTTTGAATGGTTAAACCCAAGATTTCCCCATTGAGGAAGAAATCAACTAAATAGAGATTCTAGGGCTTTTATTCGGTCGGAAATTGCAAAAAGAAAGAGAACGTTTTTTATCATTGATGAGAGATGGTTACTGCTAAGCCCACCATCTCTTGTGTCCTGAAGTTTTTCTCTTAGTGTGAAGCTTCATTTCTCTATATTAGTTTTCATTCTTGGGAGAGGGATCTAATGTGGACCATTTCTTTTAACTCCTCAGTCTTTGGACTTTTTGTGGTCCCTTTTCTTGCTGTTTAGAGTGACCAGTGGTATATTTAATATTGTATTATTGTGGGTGTACCAACTTTTAATATAGCCTGTGAATCAATAAAGTACTGTTCTTGAAGTCTCAGAGCTGAGCTTATGCGTTTAGAAGTGTATGACTCTCCCCCGGGGTTTTAGATCTCGGACAAGGCCGTGATCACAGTAACAGTTGCAGAACCACATTCACAGGCAATGTTTATGGTTTGTTGCTTCCCAATATCACGCTCTTGGTAAGATCAGAAACCTTTAGAATGTGGATACGATGTAGTGATGCAGCCGGGAAATAATAACCTGCTCTACATCCAGACATGTTCTTCCTATTACGGTTGCTGATAAGGATATCTTTAACACCCTTTACAAGTAGAGAGGAGAAAGCTGTAGATAAATATTGGTAACTACTTGGGCATTCCCTTTATCTTGCGGATTTTCTGGTCTAGTGAGGTTACAGGGATCAGAGAGGTTACAGCTTACAGGGATGAAATGGTCAAGTTAGGTTTACTTCTTAGCTTTCAGCCCAATATATGTTGGAAAACCAAGACCCACTCATCCCGTTAGTGCCTTAATTTCGTGCATTGGTGCAGCCATGTTGCATGAAACCTGAACTTCTTACAGAAATGGAACTTCTTTTTTGTTGCTAAATTGCTCAATGGAAAAGAAGGATATGGAGTTAACTAGCATATGTCTCAATAAGCTATGTTAAGAACTAGAGGCACCTTACTGATATCACTCCAGTACAAAACTACCTGCTAGATTAAGTGCTATCCACTCCCTTAGAAAGTACACTAATCCTGCCTCTCAAAAAGGTCAGATTGAAACAAGTGACACTATTTTCTGTTTGTAACTTAGTCTTGATGTCCTAAGATCTTTATTTATAGCCTCATGGAAGAGCACATGATTGCTTAATAGGGTCAGAAAAGAAAAATAACACACGTGTGAAGATGCAAATTAGGCAAAAAGATTTCCTTCTCTAAGCAACTGCTTAACAGTAGTTCAGTATATTTCTGTGTGATTGCAAGTAAAATATCTAAAATGCTCTTGCTGAAAACCAGTCAAATTCTTGGTGCTTACTTTCCAAGGAATCTCTCTCGTACAATTCATCCGAAAATCTGTCTGGATTCTGCTAATCTCCGTGAAAGCCCTTCCTGAAACTCGGCTGCTAATCAGTTGAATTAGTGGGTTACAGTAAAGTCTATTGAGATATTCTTTTATTGAGCCTTTTTTTTTTTTTTTTTTTAATAATCTATGGTTTTAGTTTGAGCATAGTGCCAATATTCTCCATTATGAATATCGTTTAAAACAAGTTCAAAAGGCGAGTTAGACAATTGCAGTTCATCATGAATATGGTTTTACTTTTGAAGTTGTAATTGCTTGCATTAGCTTTCCAAATGAGTATTCTGTCATTATTGTCATTGGATCACTATTGACCTTTGTTGATTAGAGTTCTAGAACACTAGTATGTGACTTGAGTTGTATTGTAGTTGACTTGAGCATCAGTGAACCCTCTGTTGTAGTTTATTCAATGTTGTATTCTTTATTAATAAAAGAATAACAAGGTACTCATCAAATATGTTTTACTATTTATAGGGCCGAAACATTACAGTGAAGTTTGCTGATACGAAGAACAAAACAACTCCAAGTCAATTTTCCTCAACACCAGTTCCTATGATTCCTCCTAATGCAAGTGGATACCAACAGCCTGGGAAAGCACAGGCACCGCTTGGCTACAGTTACCCACAACACATGCCATCATATCCACCGGTATCTACTTACACTAATCCTCCAGCAGCAGCTGCACCTCTACCTGCAATGACACCAGGACAATATCCACAAGGACCACAACCATCCCAGGTTTCCTATGCACCGCCACCCATGAAAGACACATTTGGAATGCCACATTCTATGCCCGTTGGAATGTCAGGTTACCCATATTACAGTTACATGGGGAAACCCTGATAAAAATACAGTTACCAAGCTTTCAGCTTCTCTGTCTTTGCTCATATGGTATATGCTTGAGCCAGTTTAAGGACTTCTTCATCCATCATCTGCTCTTATAGGCTTATGCAGTATGGTCGGTTCTCTACTGTAAGTTACGATTTTTTTTCTATCACGAGTAGAAATGCCTTTGCTAATTGAAGCATTGGTAATAATGGCGAATTAGATATTATAGTGGCATTCCTTTTAGACTAGAATCCTAGATCTTAATGTATCTTGTACTAGTTAGGTGTTTTAGGAGATGAGTTAAAGCATTTTTTTTTTTATTTATGATTTTGCAATTTAGAGTAGTTTTGAAGATGCTTCATATTGATTGTGGATTTGTGGTGGTCATATTAAAGAGTGTAAAAAGAGCATTTCAATGAGGCATTTCCATTTCATAAAAAAAATGAGGCATTTCCTCAAGATTGGCTCAAAATCATATGTTTCACTTTATAAAGAAAGAAAAGCG

mRNA sequence

TCAGGTTTAGCCGAGCCGTAAATAGCGTCCCTAGCCCAAAAGGATGTTGTGTTTTAAACAAAGCCCATAAATTTGGTTAAAACAACACAAGTCACAGGAATCCTTCTAAAAGTGCGGTCTGCCAAAACTGTGGAAGCAACAACACTGAATTGAATTGTTCTCTATCCTCAAACGTCATACTCTGCCGCCGACTGCAGTGCCACCCCCCCCAACACTCTAGCGAAAAAGATGGAGGATATGAAGAAAAGAAAGCTTGATGAAGTTGAAAATGGTCTAATTTCTCCGGCTTCAGGTGAAAGGCTGCGTTCTTTGCTTGAACCGCTTGCTAAACCCCAGTTGGTTGATCTCCTTGTTAAGCTAGGGTCCACATATTCTCCAGTTGCAGGAGAAATTATGAGTCTTGCAAGTGCTGATCCTGTTCACAGAAAGCTATTTGTTCGTGGCTTGGCATGGAATACTACATCAGAAACCTTGTGTGCTGCTTTCATAGGGCATGGAGAAATTGAGGAAGGTGCTGTGATCACTGACAAAGCAACTGGCAAGTCCCGCGGTTATGGCTTTATTACTTATAAAAATATGGATTCGGCTCAGGATGCTCTTAAAGCATCTAGCAAATTAATCGATGGTCGCTTGACTGTCTGCAACCTAGCATGTGAAGGCTTAAGCAGTGCAAGCACTGCACCTGATCAAGCACAGCGGAAACTTTACATAGGAGGCTTGTCACCAGAAATCACTACTGAGATGTTGCTTAGTTTTTTCAGCAGGCATGGTGAGATAGATGAAGGTTCTGTTGCATATGACAAAGATACAAACAAGTCTCGTGGTTTTGGGTTTGTTACATACAAGACAGTTGACTCTGCGAAGAAGGCCCTTGATGACCCAGAGAGAACCCTAGGGGGCCGAAACATTACAGTGAAGTTTGCTGATACGAAGAACAAAACAACTCCAAGTCAATTTTCCTCAACACCAGTTCCTATGATTCCTCCTAATGCAAGTGGATACCAACAGCCTGGGAAAGCACAGGCACCGCTTGGCTACAGTTACCCACAACACATGCCATCATATCCACCGGTATCTACTTACACTAATCCTCCAGCAGCAGCTGCACCTCTACCTGCAATGACACCAGGACAATATCCACAAGGACCACAACCATCCCAGGTTTCCTATGCACCGCCACCCATGAAAGACACATTTGGAATGCCACATTCTATGCCCGTTGGAATGTCAGGTTACCCATATTACAGTTACATGGGGAAACCCTGATAAAAATACAGTTACCAAGCTTTCAGCTTCTCTGTCTTTGCTCATATGGTATATGCTTGAGCCAGTTTAAGGACTTCTTCATCCATCATCTGCTCTTATAGGCTTATGCAGTATGGTCGGTTCTCTACTGTAAGTTACGATTTTTTTTCTATCACGAGTAGAAATGCCTTTGCTAATTGAAGCATTGGTAATAATGGCGAATTAGATATTATAGTGGCATTCCTTTTAGACTAGAATCCTAGATCTTAATGTATCTTGTACTAGTTAGGTGTTTTAGGAGATGAGTTAAAGCATTTTTTTTTTTATTTATGATTTTGCAATTTAGAGTAGTTTTGAAGATGCTTCATATTGATTGTGGATTTGTGGTGGTCATATTAAAGAGTGTAAAAAGAGCATTTCAATGAGGCATTTCCATTTCATAAAAAAAATGAGGCATTTCCTCAAGATTGGCTCAAAATCATATGTTTCACTTTATAAAGAAAGAAAAGCG

Coding sequence (CDS)

ATGGAGGATATGAAGAAAAGAAAGCTTGATGAAGTTGAAAATGGTCTAATTTCTCCGGCTTCAGGTGAAAGGCTGCGTTCTTTGCTTGAACCGCTTGCTAAACCCCAGTTGGTTGATCTCCTTGTTAAGCTAGGGTCCACATATTCTCCAGTTGCAGGAGAAATTATGAGTCTTGCAAGTGCTGATCCTGTTCACAGAAAGCTATTTGTTCGTGGCTTGGCATGGAATACTACATCAGAAACCTTGTGTGCTGCTTTCATAGGGCATGGAGAAATTGAGGAAGGTGCTGTGATCACTGACAAAGCAACTGGCAAGTCCCGCGGTTATGGCTTTATTACTTATAAAAATATGGATTCGGCTCAGGATGCTCTTAAAGCATCTAGCAAATTAATCGATGGTCGCTTGACTGTCTGCAACCTAGCATGTGAAGGCTTAAGCAGTGCAAGCACTGCACCTGATCAAGCACAGCGGAAACTTTACATAGGAGGCTTGTCACCAGAAATCACTACTGAGATGTTGCTTAGTTTTTTCAGCAGGCATGGTGAGATAGATGAAGGTTCTGTTGCATATGACAAAGATACAAACAAGTCTCGTGGTTTTGGGTTTGTTACATACAAGACAGTTGACTCTGCGAAGAAGGCCCTTGATGACCCAGAGAGAACCCTAGGGGGCCGAAACATTACAGTGAAGTTTGCTGATACGAAGAACAAAACAACTCCAAGTCAATTTTCCTCAACACCAGTTCCTATGATTCCTCCTAATGCAAGTGGATACCAACAGCCTGGGAAAGCACAGGCACCGCTTGGCTACAGTTACCCACAACACATGCCATCATATCCACCGGTATCTACTTACACTAATCCTCCAGCAGCAGCTGCACCTCTACCTGCAATGACACCAGGACAATATCCACAAGGACCACAACCATCCCAGGTTTCCTATGCACCGCCACCCATGAAAGACACATTTGGAATGCCACATTCTATGCCCGTTGGAATGTCAGGTTACCCATATTACAGTTACATGGGGAAACCCTGA

Protein sequence

MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLASADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSAQDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRHGEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADTKNKTTPSQFSSTPVPMIPPNASGYQQPGKAQAPLGYSYPQHMPSYPPVSTYTNPPAAAAPLPAMTPGQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYYSYMGKP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16311.1Spo16311.1mRNA


Homology
[Close]
BLAST of Spo16311.1 vs. NCBI nr
Match: gi|902201868|gb|KNA14114.1| (hypothetical protein SOVF_110620 [Spinacia oleracea])

HSP 1 Score: 686.0 bits (1769), Expect = 3.300e-194
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS 60
           MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS
Sbjct: 1   MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS 60

Query: 61  ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA 120
           ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA
Sbjct: 61  ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA 120

Query: 121 QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH 180
           QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH
Sbjct: 121 QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH 180

Query: 181 GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADTKNKTTP 240
           GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADTKNKTTP
Sbjct: 181 GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADTKNKTTP 240

Query: 241 SQFSSTPVPMIPPNASGYQQPGKAQAPLGYSYPQHMPSYPPVSTYTNPPAAAAPLPAMTP 300
           SQFSSTPVPMIPPNASGYQQPGKAQAPLGYSYPQHMPSYPPVSTYTNPPAAAAPLPAMTP
Sbjct: 241 SQFSSTPVPMIPPNASGYQQPGKAQAPLGYSYPQHMPSYPPVSTYTNPPAAAAPLPAMTP 300

Query: 301 GQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYYSYMGKP 346
           GQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYYSYMGKP
Sbjct: 301 GQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYYSYMGKP 345
[Close]
BLAST of Spo16311.1 vs. NCBI nr
Match: gi|802750237|ref|XP_012087749.1| (PREDICTED: UBP1-associated protein 2A-like [Jatropha curcas])

HSP 1 Score: 425.6 bits (1093), Expect = 8.100e-116
Identity = 233/344 (67.73%), Postives = 264/344 (76.74%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS 60
           MEDMKKRK++E  NG     + E LRSLL+PL K QLVDLL +LG+ Y  +A EI SLAS
Sbjct: 1   MEDMKKRKMEESSNGGEISTTQEHLRSLLDPLNKSQLVDLLSRLGTQYPSIAEEIKSLAS 60

Query: 61  ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA 120
           ADPVHRKLFVRGLAWNTTSETLCAAF  HGEIEEGAVI DKATGKSRGYGFITYK+M+S 
Sbjct: 61  ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 120

Query: 121 QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH 180
           Q+AL+A SKLIDGR+ VCNLACEGLS  ST PD AQRKLYIG LSPEIT+E+LL+FF RH
Sbjct: 121 QNALRAPSKLIDGRMAVCNLACEGLSGVSTTPDLAQRKLYIGSLSPEITSELLLNFFGRH 180

Query: 181 GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADT-KNKTT 240
           GEI+EGSVAYDKDTN+SRGFGFVTYKTV++AKKA+DDP++TLGGR I VK ADT K KT 
Sbjct: 181 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPQKTLGGRTIVVKLADTHKGKTA 240

Query: 241 PSQFSSTPVPMIPPNASGYQQPGKAQ---APLGYSYPQHMPSYPPVSTYTNPPAAAAPLP 300
            +Q     VP+  P A+GY QP KA    AP+GYSYPQ M SY P S+Y +PP A AP P
Sbjct: 241 QTQLPPPVVPVPLPMAAGYTQPVKAHPGPAPVGYSYPQTMTSY-PASSYPSPPTAPAPYP 300

Query: 301 AMTPGQYPQGPQPSQVSYAPPPM-KDTFGMPHSMPVGMSGYPYY 340
                     PQ SQ+SY P  M KD  G+    P+GM GYPYY
Sbjct: 301 ----------PQ-SQISYPPVAMKKDPLGLSPPTPMGMGGYPYY 332
[Close]
BLAST of Spo16311.1 vs. NCBI nr
Match: gi|1009161499|ref|XP_015898932.1| (PREDICTED: UBP1-associated protein 2C-like [Ziziphus jujuba])

HSP 1 Score: 418.7 bits (1075), Expect = 9.900e-114
Identity = 229/344 (66.57%), Postives = 262/344 (76.16%), Query Frame = 1 

		  

Query: 1   MEDMKKRKL-DEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLA 60
           MEDMKKRKL D   +  +S    E LR+LL+PLAKPQLVDLL KLGS Y  +A EI S+A
Sbjct: 1   MEDMKKRKLGDSAADDDVSTV--EELRTLLDPLAKPQLVDLLAKLGSQYPSIADEIRSIA 60

Query: 61  SADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDS 120
           SADPVHRKLFVRGLAWNTTSETLC AF  HGEIEEGAVI DKATGKSRGYGFITYK+MDS
Sbjct: 61  SADPVHRKLFVRGLAWNTTSETLCDAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMDS 120

Query: 121 AQDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSR 180
            Q ALKA SKLIDGRL VCNLACEGLS  ST PD AQRKLYIGGLSPE+T+EMLL+FF R
Sbjct: 121 TQKALKAPSKLIDGRLAVCNLACEGLSGTSTTPDLAQRKLYIGGLSPEVTSEMLLNFFGR 180

Query: 181 HGEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADT-KNKT 240
           HG+I+EGSVAYDKD+N+SRGFGFVTYKTV+SAKKA+DDP++TLGGRN+ VK AD+ K +T
Sbjct: 181 HGDIEEGSVAYDKDSNESRGFGFVTYKTVESAKKAIDDPQKTLGGRNLIVKLADSHKGRT 240

Query: 241 TPSQFSSTPVPMIPPNASGYQQPGKAQ---APLGYSYPQHMPSYPPVSTYTNPPAAAAPL 300
             +Q  +   PM  P A GY QPGKA    A +GY YPQ+M    P S+Y +PP A+AP 
Sbjct: 241 MQTQLPAAMAPMSLPMAGGYPQPGKAHANTASVGYGYPQNM--VYPDSSYPSPPTASAPF 300

Query: 301 PAMTPGQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYY 340
                    Q P   QV+      KD+FG+P + P+GM GYPYY
Sbjct: 301 AMQN-----QVPYAQQVAL----KKDSFGLPSTTPMGMGGYPYY 331
[Close]
BLAST of Spo16311.1 vs. NCBI nr
Match: gi|225441409|ref|XP_002278602.1| (PREDICTED: UBP1-associated protein 2C-like isoform X1 [Vitis vinifera])

HSP 1 Score: 414.8 bits (1065), Expect = 1.400e-112
Identity = 226/344 (65.70%), Postives = 263/344 (76.45%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS 60
           MED+KKRKL+E  NG IS +S E L+ LL+PL+K QLVDLL KLGS Y  +A EI S+AS
Sbjct: 14  MEDLKKRKLEEASNGQIS-SSPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAEEIKSVAS 73

Query: 61  ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA 120
           ADPVHRKLFVRGLAWNTTSETLCAAF  HGEIEEGAVI DK TGKSRGYGFITYK+M+S 
Sbjct: 74  ADPVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFITYKHMEST 133

Query: 121 QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH 180
           Q AL+A SKLIDGR+ VCNLACEGLS AST PDQAQRKLYIGGL+P++T+E+LLSFF RH
Sbjct: 134 QSALQAPSKLIDGRMAVCNLACEGLSGASTTPDQAQRKLYIGGLAPDVTSEVLLSFFGRH 193

Query: 181 GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADT-KNKTT 240
           GEI+EGSVAYDK+TN+SRGFGFVTYKTV++AKKA+DDP++ LGGR+I VK AD+ K K  
Sbjct: 194 GEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKLADSHKGKMI 253

Query: 241 PSQFSSTPVPMIPPNASGY-QQPGKAQA---PLGYSYPQHMPSYPPVSTYTNPPAAAAPL 300
            +Q S+  VP+  P A+GY QQPGK  A   P+ Y+YPQ   +YP    Y  PP   AP 
Sbjct: 254 QAQLSTAVVPIALPLAAGYPQQPGKPPASATPVAYTYPQAGATYP---AYPGPPTGPAPY 313

Query: 301 PAMTPGQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYY 340
            +  P  YP  PQ    S     MKD  G+P +  VGM GYPYY
Sbjct: 314 SSTAPAPYPSQPQMPYSS--ATVMKDPLGLPPTPTVGMGGYPYY 351
[Close]
BLAST of Spo16311.1 vs. NCBI nr
Match: gi|297739851|emb|CBI30033.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 414.8 bits (1065), Expect = 1.400e-112
Identity = 226/344 (65.70%), Postives = 263/344 (76.45%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS 60
           MED+KKRKL+E  NG IS +S E L+ LL+PL+K QLVDLL KLGS Y  +A EI S+AS
Sbjct: 1   MEDLKKRKLEEASNGQIS-SSPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAEEIKSVAS 60

Query: 61  ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA 120
           ADPVHRKLFVRGLAWNTTSETLCAAF  HGEIEEGAVI DK TGKSRGYGFITYK+M+S 
Sbjct: 61  ADPVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFITYKHMEST 120

Query: 121 QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH 180
           Q AL+A SKLIDGR+ VCNLACEGLS AST PDQAQRKLYIGGL+P++T+E+LLSFF RH
Sbjct: 121 QSALQAPSKLIDGRMAVCNLACEGLSGASTTPDQAQRKLYIGGLAPDVTSEVLLSFFGRH 180

Query: 181 GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADT-KNKTT 240
           GEI+EGSVAYDK+TN+SRGFGFVTYKTV++AKKA+DDP++ LGGR+I VK AD+ K K  
Sbjct: 181 GEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKLADSHKGKMI 240

Query: 241 PSQFSSTPVPMIPPNASGY-QQPGKAQA---PLGYSYPQHMPSYPPVSTYTNPPAAAAPL 300
            +Q S+  VP+  P A+GY QQPGK  A   P+ Y+YPQ   +YP    Y  PP   AP 
Sbjct: 241 QAQLSTAVVPIALPLAAGYPQQPGKPPASATPVAYTYPQAGATYP---AYPGPPTGPAPY 300

Query: 301 PAMTPGQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYY 340
            +  P  YP  PQ    S     MKD  G+P +  VGM GYPYY
Sbjct: 301 SSTAPAPYPSQPQMPYSS--ATVMKDPLGLPPTPTVGMGGYPYY 338
[Close]
BLAST of Spo16311.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5B4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_110620 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 2.300e-194
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS 60
           MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS
Sbjct: 1   MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS 60

Query: 61  ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA 120
           ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA
Sbjct: 61  ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA 120

Query: 121 QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH 180
           QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH
Sbjct: 121 QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH 180

Query: 181 GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADTKNKTTP 240
           GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADTKNKTTP
Sbjct: 181 GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADTKNKTTP 240

Query: 241 SQFSSTPVPMIPPNASGYQQPGKAQAPLGYSYPQHMPSYPPVSTYTNPPAAAAPLPAMTP 300
           SQFSSTPVPMIPPNASGYQQPGKAQAPLGYSYPQHMPSYPPVSTYTNPPAAAAPLPAMTP
Sbjct: 241 SQFSSTPVPMIPPNASGYQQPGKAQAPLGYSYPQHMPSYPPVSTYTNPPAAAAPLPAMTP 300

Query: 301 GQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYYSYMGKP 346
           GQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYYSYMGKP
Sbjct: 301 GQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYYSYMGKP 345
[Close]
BLAST of Spo16311.1 vs. UniProtKB/TrEMBL
Match: A0A067JYJ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25525 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 5.600e-116
Identity = 233/344 (67.73%), Postives = 264/344 (76.74%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS 60
           MEDMKKRK++E  NG     + E LRSLL+PL K QLVDLL +LG+ Y  +A EI SLAS
Sbjct: 1   MEDMKKRKMEESSNGGEISTTQEHLRSLLDPLNKSQLVDLLSRLGTQYPSIAEEIKSLAS 60

Query: 61  ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA 120
           ADPVHRKLFVRGLAWNTTSETLCAAF  HGEIEEGAVI DKATGKSRGYGFITYK+M+S 
Sbjct: 61  ADPVHRKLFVRGLAWNTTSETLCAAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMEST 120

Query: 121 QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH 180
           Q+AL+A SKLIDGR+ VCNLACEGLS  ST PD AQRKLYIG LSPEIT+E+LL+FF RH
Sbjct: 121 QNALRAPSKLIDGRMAVCNLACEGLSGVSTTPDLAQRKLYIGSLSPEITSELLLNFFGRH 180

Query: 181 GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADT-KNKTT 240
           GEI+EGSVAYDKDTN+SRGFGFVTYKTV++AKKA+DDP++TLGGR I VK ADT K KT 
Sbjct: 181 GEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPQKTLGGRTIVVKLADTHKGKTA 240

Query: 241 PSQFSSTPVPMIPPNASGYQQPGKAQ---APLGYSYPQHMPSYPPVSTYTNPPAAAAPLP 300
            +Q     VP+  P A+GY QP KA    AP+GYSYPQ M SY P S+Y +PP A AP P
Sbjct: 241 QTQLPPPVVPVPLPMAAGYTQPVKAHPGPAPVGYSYPQTMTSY-PASSYPSPPTAPAPYP 300

Query: 301 AMTPGQYPQGPQPSQVSYAPPPM-KDTFGMPHSMPVGMSGYPYY 340
                     PQ SQ+SY P  M KD  G+    P+GM GYPYY
Sbjct: 301 ----------PQ-SQISYPPVAMKKDPLGLSPPTPMGMGGYPYY 332
[Close]
BLAST of Spo16311.1 vs. UniProtKB/TrEMBL
Match: D7TIF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06300 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.000e-112
Identity = 226/344 (65.70%), Postives = 263/344 (76.45%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEVENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLAS 60
           MED+KKRKL+E  NG IS +S E L+ LL+PL+K QLVDLL KLGS Y  +A EI S+AS
Sbjct: 1   MEDLKKRKLEEASNGQIS-SSPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAEEIKSVAS 60

Query: 61  ADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSA 120
           ADPVHRKLFVRGLAWNTTSETLCAAF  HGEIEEGAVI DK TGKSRGYGFITYK+M+S 
Sbjct: 61  ADPVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFITYKHMEST 120

Query: 121 QDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRH 180
           Q AL+A SKLIDGR+ VCNLACEGLS AST PDQAQRKLYIGGL+P++T+E+LLSFF RH
Sbjct: 121 QSALQAPSKLIDGRMAVCNLACEGLSGASTTPDQAQRKLYIGGLAPDVTSEVLLSFFGRH 180

Query: 181 GEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADT-KNKTT 240
           GEI+EGSVAYDK+TN+SRGFGFVTYKTV++AKKA+DDP++ LGGR+I VK AD+ K K  
Sbjct: 181 GEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKLADSHKGKMI 240

Query: 241 PSQFSSTPVPMIPPNASGY-QQPGKAQA---PLGYSYPQHMPSYPPVSTYTNPPAAAAPL 300
            +Q S+  VP+  P A+GY QQPGK  A   P+ Y+YPQ   +YP    Y  PP   AP 
Sbjct: 241 QAQLSTAVVPIALPLAAGYPQQPGKPPASATPVAYTYPQAGATYP---AYPGPPTGPAPY 300

Query: 301 PAMTPGQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGYPYY 340
            +  P  YP  PQ    S     MKD  G+P +  VGM GYPYY
Sbjct: 301 SSTAPAPYPSQPQMPYSS--ATVMKDPLGLPPTPTVGMGGYPYY 338
[Close]
BLAST of Spo16311.1 vs. UniProtKB/TrEMBL
Match: A0A061EXD0_THECC (RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_024877 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 3.800e-112
Identity = 229/346 (66.18%), Postives = 267/346 (77.17%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEV-ENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLA 60
           MEDMKKRK++E+  NG +S  + E LRSLL+PLAK QLVDLL +LGS Y  +A EI S+A
Sbjct: 1   MEDMKKRKMEEMGNNGELS--TQEELRSLLDPLAKSQLVDLLSRLGSQYPSIAEEIKSIA 60

Query: 61  SADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDS 120
           S+DPVHRKLFVRGLAWNTTSETLCAAF  HGEIEEGAVI DK +GKSRGYGFITYK+M+S
Sbjct: 61  SSDPVHRKLFVRGLAWNTTSETLCAAFQMHGEIEEGAVIYDKTSGKSRGYGFITYKHMES 120

Query: 121 AQDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSR 180
           AQ AL+A SKLIDGR+ VCNLACEGLS AST PD AQRKLYIGGLSP++T+E+LL+FF R
Sbjct: 121 AQSALRAPSKLIDGRMAVCNLACEGLSGASTTPDLAQRKLYIGGLSPDVTSEILLNFFGR 180

Query: 181 HGEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVKFADT-KNKT 240
           HGEI+EGSVAYDKDTN+SRGFGFVTYKTV++AKKA+DDP++ LGGR I VK ADT K K 
Sbjct: 181 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPQKILGGRTIIVKLADTHKGKP 240

Query: 241 TPSQF-SSTPVPMIPPNASGYQQPGKAQ---APLGYSYPQHMPSYPPVSTYTNPPAAAAP 300
             +Q  ++  VP+  P A  Y QPGKA    AP GY+YPQ + SY P S+Y +PPAA AP
Sbjct: 241 VQTQLPAAAVVPVALPMAPSYPQPGKAHPTAAPAGYTYPQTIASY-PASSYPSPPAAPAP 300

Query: 301 LPAMTPGQYPQGPQPSQVSYAP-PPMKDTFGMPHSMPVGMSGYPYY 340
            P           QP  + YAP    KD  GMP + P+GM GYPYY
Sbjct: 301 YPT----------QP-LIPYAPLAAKKDPQGMPPTTPMGMGGYPYY 332
[Close]
BLAST of Spo16311.1 vs. UniProtKB/TrEMBL
Match: A0A061EYF3_THECC (RNA-binding family protein isoform 2 OS=Theobroma cacao GN=TCM_024877 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.500e-108
Identity = 229/368 (62.23%), Postives = 267/368 (72.55%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEV-ENGLISPASGERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLA 60
           MEDMKKRK++E+  NG +S  + E LRSLL+PLAK QLVDLL +LGS Y  +A EI S+A
Sbjct: 1   MEDMKKRKMEEMGNNGELS--TQEELRSLLDPLAKSQLVDLLSRLGSQYPSIAEEIKSIA 60

Query: 61  SADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDS 120
           S+DPVHRKLFVRGLAWNTTSETLCAAF  HGEIEEGAVI DK +GKSRGYGFITYK+M+S
Sbjct: 61  SSDPVHRKLFVRGLAWNTTSETLCAAFQMHGEIEEGAVIYDKTSGKSRGYGFITYKHMES 120

Query: 121 AQDALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSR 180
           AQ AL+A SKLIDGR+ VCNLACEGLS AST PD AQRKLYIGGLSP++T+E+LL+FF R
Sbjct: 121 AQSALRAPSKLIDGRMAVCNLACEGLSGASTTPDLAQRKLYIGGLSPDVTSEILLNFFGR 180

Query: 181 HGEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLG---------------- 240
           HGEI+EGSVAYDKDTN+SRGFGFVTYKTV++AKKA+DDP++ LG                
Sbjct: 181 HGEIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPQKILGVSGQCHYMCSMACLMS 240

Query: 241 ------GRNITVKFADT-KNKTTPSQF-SSTPVPMIPPNASGYQQPGKAQ---APLGYSY 300
                 GR I VK ADT K K   +Q  ++  VP+  P A  Y QPGKA    AP GY+Y
Sbjct: 241 DLWRRKGRTIIVKLADTHKGKPVQTQLPAAAVVPVALPMAPSYPQPGKAHPTAAPAGYTY 300

Query: 301 PQHMPSYPPVSTYTNPPAAAAPLPAMTPGQYPQGPQPSQVSYAP-PPMKDTFGMPHSMPV 340
           PQ + SY P S+Y +PPAA AP P           QP  + YAP    KD  GMP + P+
Sbjct: 301 PQTIASY-PASSYPSPPAAPAPYPT----------QP-LIPYAPLAAKKDPQGMPPTTPM 354
[Close]
BLAST of Spo16311.1 vs. ExPASy Swiss-Prot
Match: UBA2A_ARATH (UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.600e-42
Identity = 91/216 (42.13%), Postives = 132/216 (61.11%), Query Frame = 1 

		  

Query: 23  ERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLASADPVHRKLFVRGLAWNTTSETL 82
           E ++ LLEP +K Q++ LL +    +  VA  I  +A  DPVHRK+FV GL W+T +ETL
Sbjct: 97  EPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETL 156

Query: 83  CAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSAQDALKASSKLIDGRLTVCNLAC 142
             AF  +GEIE+   + DK +GKS+GYGFI YK+   A++ALK   K I  R+T C LA 
Sbjct: 157 IEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLAS 216

Query: 143 EG--------LSSASTAPDQ------AQRKLYIGGLSPEITTEMLLSFFSRHGEIDEGSV 202
           +G         ++A +AP Q       Q+K+Y+  +  E+  + LL FFS+ GEI+EG +
Sbjct: 217 KGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPL 276

Query: 203 AYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGG 225
             DK T + +GF    YK+ +SAK+AL++P +T  G
Sbjct: 277 GLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEG 312
[Close]
BLAST of Spo16311.1 vs. ExPASy Swiss-Prot
Match: UBA2B_ARATH (UBP1-associated protein 2B OS=Arabidopsis thaliana GN=UBA2B PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.800e-41
Identity = 87/210 (41.43%), Postives = 127/210 (60.48%), Query Frame = 1 

		  

Query: 23  ERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLASADPVHRKLFVRGLAWNTTSETL 82
           E +  LLEP +K QL+ LL +    +  VA  I  +A  D VHRK+FV GL W+T +++L
Sbjct: 85  EPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSL 144

Query: 83  CAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSAQDALKASSKLIDGRLTVCNLAC 142
             AF  +GEIE+   + DK +G+S+GYGFI +K+   A++ALK   K I  R+T C LA 
Sbjct: 145 IDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLAS 204

Query: 143 EGLSSASTA--------PDQAQRKLYIGGLSPEITTEMLLSFFSRHGEIDEGSVAYDKDT 202
            G    +          P+  QRK+Y+  +S +I  + LL FFSR GEI+EG +  DK T
Sbjct: 205 IGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKAT 264

Query: 203 NKSRGFGFVTYKTVDSAKKALDDPERTLGG 225
            + +GF    Y++++SAKKAL++P +T  G
Sbjct: 265 GRPKGFALFVYRSLESAKKALEEPHKTFEG 294
[Close]
BLAST of Spo16311.1 vs. ExPASy Swiss-Prot
Match: UBA2C_ARATH (UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.100e-40
Identity = 125/357 (35.01%), Postives = 178/357 (49.86%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEVENGLISPASG---------ERLRSLLEPLAKPQLVDLLVKLGSTYSPV 60
           M+ MKKRKLDE  NGL +   G         +  R ++E     QL+DLL +    +  V
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  AGEIMSLASADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGF 120
              +   A +D   RKLF+RGLA +TT+E L + F  +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 ITYKNMDSAQDALKASSKLIDGRLTVCNLACEG-LSSASTAPDQAQRKLYIGGLSPEITT 180
           +T+ ++D A  ALK  SK IDGR+TV  LA  G   + S   D + RK+Y+  +  ++  
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 EMLLSFFSRHGEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVK 240
           + LL+ F  +G+++EG + +DK T KSRGF    YKT + A+ AL DP + + G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 FA-DTKNKTTPSQFSSTPVPMIPPNASGYQQPGKAQAPLGYSYPQHMPSYPPVSTYTNPP 300
            A D K    P       +P      SG+          G+ + + M    P   Y    
Sbjct: 241 LAVDGKKGGKPG------MPQAQDGGSGH----------GHVHGEGMGMVRPAGPY---- 300

Query: 301 AAAAPLPAMTPGQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGY-PYYSYMGKP 346
            AA  + A   G Y  G          PP         SM VG +GY  +Y   G P
Sbjct: 301 GAAGGISAY--GGYSGG----------PPAHHMNSTHSSMGVGSAGYGGHYGGYGGP 325
[Close]
BLAST of Spo16311.1 vs. ExPASy Swiss-Prot
Match: UBA1A_ARATH (UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 6.600e-25
Identity = 59/132 (44.70%), Postives = 78/132 (59.09%), Query Frame = 1 

		  

Query: 23  ERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLASADPVHRKLFVRGLAWNTTSETL 82
           E LR LL+P +K QLVDL+       S +   ++  A  D  HRK+FV GL W TT ETL
Sbjct: 61  EELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETL 120

Query: 83  CAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSAQDALKASSKLIDGRLTVCNLAC 142
              F G+GEIEE  V+ DKATGK++G+GF+ +K    A++ALK   K I  R   C LA 
Sbjct: 121 VGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLAS 180

Query: 143 EGLSSASTAPDQ 155
            G +++    DQ
Sbjct: 181 MGPAASGKGHDQ 192
[Close]
BLAST of Spo16311.1 vs. ExPASy Swiss-Prot
Match: UBA1C_ARATH (UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 6.800e-22
Identity = 59/154 (38.31%), Postives = 85/154 (55.19%), Query Frame = 1 

		  

Query: 5   KKRKLDEVENGLISPASGER--LRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLASAD 64
           KKRK D+ +    S    ++  ++ LL   +K +LV+L+ K     S +   I+  A  D
Sbjct: 345 KKRKKDKKQTKSDSDFEHDKEDIKQLLVAYSKEELVNLIYKTAEKGSRLISAILESADRD 404

Query: 65  PVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSAQD 124
              R +FVRG  W+TT E L  AF  +GEIEE +V+ DK TG+ +GYGF+ +K    A++
Sbjct: 405 IAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGARE 464

Query: 125 ALKASSKLIDGRLTVCNLACEGLSSASTAPDQAQ 157
           ALK   K +  R+ VCNLA E    A    D A+
Sbjct: 465 ALKRPEKRMYNRIVVCNLASEKPGKAGKEQDMAE 498
[Close]
BLAST of Spo16311.1 vs. TAIR (Arabidopsis)
Match: AT3G56860.3 (UBP1-associated protein 2A)

HSP 1 Score: 174.9 bits (442), Expect = 8.800e-44
Identity = 91/216 (42.13%), Postives = 132/216 (61.11%), Query Frame = 1 

		  

Query: 23  ERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLASADPVHRKLFVRGLAWNTTSETL 82
           E ++ LLEP +K Q++ LL +    +  VA  I  +A  DPVHRK+FV GL W+T +ETL
Sbjct: 97  EPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETL 156

Query: 83  CAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSAQDALKASSKLIDGRLTVCNLAC 142
             AF  +GEIE+   + DK +GKS+GYGFI YK+   A++ALK   K I  R+T C LA 
Sbjct: 157 IEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLAS 216

Query: 143 EG--------LSSASTAPDQ------AQRKLYIGGLSPEITTEMLLSFFSRHGEIDEGSV 202
           +G         ++A +AP Q       Q+K+Y+  +  E+  + LL FFS+ GEI+EG +
Sbjct: 217 KGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPL 276

Query: 203 AYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGG 225
             DK T + +GF    YK+ +SAK+AL++P +T  G
Sbjct: 277 GLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEG 312
[Close]
BLAST of Spo16311.1 vs. TAIR (Arabidopsis)
Match: AT2G41060.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 170.2 bits (430), Expect = 2.200e-42
Identity = 87/210 (41.43%), Postives = 127/210 (60.48%), Query Frame = 1 

		  

Query: 23  ERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLASADPVHRKLFVRGLAWNTTSETL 82
           E +  LLEP +K QL+ LL +    +  VA  I  +A  D VHRK+FV GL W+T +++L
Sbjct: 85  EPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSL 144

Query: 83  CAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSAQDALKASSKLIDGRLTVCNLAC 142
             AF  +GEIE+   + DK +G+S+GYGFI +K+   A++ALK   K I  R+T C LA 
Sbjct: 145 IDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLAS 204

Query: 143 EGLSSASTA--------PDQAQRKLYIGGLSPEITTEMLLSFFSRHGEIDEGSVAYDKDT 202
            G    +          P+  QRK+Y+  +S +I  + LL FFSR GEI+EG +  DK T
Sbjct: 205 IGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKAT 264

Query: 203 NKSRGFGFVTYKTVDSAKKALDDPERTLGG 225
            + +GF    Y++++SAKKAL++P +T  G
Sbjct: 265 GRPKGFALFVYRSLESAKKALEEPHKTFEG 294
[Close]
BLAST of Spo16311.1 vs. TAIR (Arabidopsis)
Match: AT3G15010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 168.7 bits (426), Expect = 6.300e-42
Identity = 125/357 (35.01%), Postives = 178/357 (49.86%), Query Frame = 1 

		  

Query: 1   MEDMKKRKLDEVENGLISPASG---------ERLRSLLEPLAKPQLVDLLVKLGSTYSPV 60
           M+ MKKRKLDE  NGL +   G         +  R ++E     QL+DLL +    +  V
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  AGEIMSLASADPVHRKLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGF 120
              +   A +D   RKLF+RGLA +TT+E L + F  +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 ITYKNMDSAQDALKASSKLIDGRLTVCNLACEG-LSSASTAPDQAQRKLYIGGLSPEITT 180
           +T+ ++D A  ALK  SK IDGR+TV  LA  G   + S   D + RK+Y+  +  ++  
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 EMLLSFFSRHGEIDEGSVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPERTLGGRNITVK 240
           + LL+ F  +G+++EG + +DK T KSRGF    YKT + A+ AL DP + + G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 FA-DTKNKTTPSQFSSTPVPMIPPNASGYQQPGKAQAPLGYSYPQHMPSYPPVSTYTNPP 300
            A D K    P       +P      SG+          G+ + + M    P   Y    
Sbjct: 241 LAVDGKKGGKPG------MPQAQDGGSGH----------GHVHGEGMGMVRPAGPY---- 300

Query: 301 AAAAPLPAMTPGQYPQGPQPSQVSYAPPPMKDTFGMPHSMPVGMSGY-PYYSYMGKP 346
            AA  + A   G Y  G          PP         SM VG +GY  +Y   G P
Sbjct: 301 GAAGGISAY--GGYSGG----------PPAHHMNSTHSSMGVGSAGYGGHYGGYGGP 325
[Close]
BLAST of Spo16311.1 vs. TAIR (Arabidopsis)
Match: AT2G22090.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 116.3 bits (290), Expect = 3.700e-26
Identity = 59/132 (44.70%), Postives = 78/132 (59.09%), Query Frame = 1 

		  

Query: 23  ERLRSLLEPLAKPQLVDLLVKLGSTYSPVAGEIMSLASADPVHRKLFVRGLAWNTTSETL 82
           E LR LL+P +K QLVDL+       S +   ++  A  D  HRK+FV GL W TT ETL
Sbjct: 61  EELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETL 120

Query: 83  CAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSAQDALKASSKLIDGRLTVCNLAC 142
              F G+GEIEE  V+ DKATGK++G+GF+ +K    A++ALK   K I  R   C LA 
Sbjct: 121 VGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLAS 180

Query: 143 EGLSSASTAPDQ 155
            G +++    DQ
Sbjct: 181 MGPAASGKGHDQ 192
[Close]
BLAST of Spo16311.1 vs. TAIR (Arabidopsis)
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 114.8 bits (286), Expect = 1.100e-25
Identity = 59/180 (32.78%), Postives = 97/180 (53.89%), Query Frame = 1 

		  

Query: 67  KLFVRGLAWNTTSETLCAAFIGHGEIEEGAVITDKATGKSRGYGFITYKNMDSAQDALKA 126
           KLFV G++W TT+ET    F   GE+ +  ++TD+ TG  RG+GF+T+ +   A+  L+ 
Sbjct: 67  KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126

Query: 127 SSKLIDGRLTVCNLACEGLSSASTAPDQAQRKLYIGGLSPEITTEMLLSFFSRHGEIDEG 186
              + D ++ +      G            RK+++GGL P +  + L ++F  +G+I E 
Sbjct: 127 DHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEH 186

Query: 187 SVAYDKDTNKSRGFGFVTYKTVDSAKKALDDPE-RTLGGRNITVKFADTKNKTTPSQFSS 246
            + YD  T +SRGFGFVT++T DS  +   D +   LG + + +K A+ K     + F S
Sbjct: 187 QIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDNSFRS 246
The following BLAST results are available for this feature:
BLAST of Spo16311.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902201868|gb|KNA14114.1|3.3e-194100.hypothetical protein SOVF_1106... [more]
gi|802750237|ref|XP_012087749.1|8.1e-11667.7PREDICTED: UBP1-associated pro... [more]
gi|1009161499|ref|XP_015898932.1|9.9e-11466.5PREDICTED: UBP1-associated pro... [more]
gi|225441409|ref|XP_002278602.1|1.4e-11265.7PREDICTED: UBP1-associated pro... [more]
gi|297739851|emb|CBI30033.3|1.4e-11265.7unnamed protein product [Vitis... [more]
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BLAST of Spo16311.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R5B4_SPIOL2.3e-194100.Uncharacterized protein OS=Spi... [more]
A0A067JYJ7_JATCU5.6e-11667.7Uncharacterized protein OS=Jat... [more]
D7TIF7_VITVI1.0e-11265.7Putative uncharacterized prote... [more]
A0A061EXD0_THECC3.8e-11266.1RNA-binding family protein iso... [more]
A0A061EYF3_THECC2.5e-10862.2RNA-binding family protein iso... [more]
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BLAST of Spo16311.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
UBA2A_ARATH1.6e-4242.1UBP1-associated protein 2A OS=... [more]
UBA2B_ARATH3.8e-4141.4UBP1-associated protein 2B OS=... [more]
UBA2C_ARATH1.1e-4035.0UBP1-associated protein 2C OS=... [more]
UBA1A_ARATH6.6e-2544.7UBP1-associated proteins 1A OS... [more]
UBA1C_ARATH6.8e-2238.3UBP1-associated proteins 1C OS... [more]
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BLAST of Spo16311.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G56860.38.8e-4442.1UBP1-associated protein 2A[more]
AT2G41060.12.2e-4241.4RNA-binding (RRM/RBD/RNP motif... [more]
AT3G15010.16.3e-4235.0RNA-binding (RRM/RBD/RNP motif... [more]
AT2G22090.23.7e-2644.7RNA-binding (RRM/RBD/RNP motif... [more]
AT1G17640.11.1e-2532.7RNA-binding (RRM/RBD/RNP motif... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 68..134
score: 2.1E-14coord: 159..227
score: 1.7
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 158..230
score: 2.1E-23coord: 67..139
score: 6.8
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 66..143
score: 14.198coord: 157..234
score: 17
IPR012677Nucleotide-binding alpha-beta plait domainGENE3D3.30.70.330coord: 148..237
score: 2.5E-25coord: 60..141
score: 1.0
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 52..143
score: 4.16E-21coord: 153..247
score: 7.52
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 316..339
score: 1.8E-60coord: 63..238
score: 1.8E-60coord: 2..11
score: 1.8
NoneNo IPR availablePANTHERPTHR24012:SF490UBP1-ASSOCIATED PROTEIN 2Ccoord: 316..339
score: 1.8E-60coord: 2..11
score: 1.8E-60coord: 63..238
score: 1.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0055085 transmembrane transport
biological_process GO:0044070 regulation of anion transport
biological_process GO:0048312 intracellular distribution of mitochondria
biological_process GO:0006396 RNA processing
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0016070 RNA metabolic process
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0009987 cellular process
biological_process GO:0044248 cellular catabolic process
biological_process GO:0032502 developmental process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006457 protein folding
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0005622 intracellular
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005634 nucleus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0008308 voltage-gated anion channel activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003746 translation elongation factor activity
RNA-Seq Expression