Spo16337 (gene) | SpinachBase

Overview


Name	Spo16337
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	BnaC05g01390D protein
Location	chr6 : 21263426 .. 21264933 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACCAAAACTAGCTAACCGAGCAGAAGATAATCAGAAAAATTAAGAAATAGAAAGATATGTTGCAATCAAGATTAAGAGCAGCAATAATTAGCAAGACTAGATTAGGGACAAATTGGGGATTTATTACAAAAAGATTATTTTGCGAAGAAAATAGTGCAGCAACTCAAGGAGTTGCTGAAACTCAAGGCTATGCTCCTCTTCCAACTGGTCTTCCTGCTGATCCTGCCCTTCATTCTAGTGATCCTCCTCAGGTACAATAAAATATTAATAGATCGTGTTGTATCAAATTCGTTTCGGATGGTTGGAGTATAATCGTACATGTTGTGAATTTGTGATTCTTTGATACTAATCCAATCCGTTAACGAGTAGGACACTTTATACTATTCTTCCCCTAAAAAATATATATAAAAAATAATATACTAATCTGACATGTTTACTTAAGTACTTGTATTTATTAGGCACGTTGATTAAGTTAGGCATGAGAAGTATCCTTACATAAGATCTTCATACCACACAAATGATTAATAGGAAATATACAGTTTAGGCCATGTCACAATTAGATATAGCTGGTTGACTGTCCGCTAGTTATTAATAGTTTGTAATAGGTAGTTTGCCTTGTTAATTGAATTATTATTTGTGTGAAAGTGTTTGATAAATTAGCTTTTTTTTCTTTGACAATGTGACGAATGTTCAAATTGTAGGGGGAAGAATCAGACGAAGAGTTAAAAGCAACATTGGCGGACGTTTCGCCCCGAACAACAGCCGATAAACCGGATCCACTACTCCAACCAAAGGCACCCGTTTCTTCCTCACCAAATATAGGACATACAGGGGTGGGCGGACTACCAGAGCCAAACACTCAACAAAGGCGTCAATTGTCAAACCGTCCGGATCAATCAGATGGGGTGGAAGCCCAAAAGGCACAGAAAAGAGCACAAGAGGAGGACAACAAAGAGTACTTCAAACACCACAAGGCATCTCCTTTATCAGAGATAGAGTTTGCGGATACGAGAAAGCCCGTAACGCAGGCCACGGATAGTCCTACGTCGTATTATGGAAAAGATTCGGACTTGATCCTGTGGAAGCCGGAGCAGCTTGATACGGCCGAGGATTCTTTGCTACGAGCTGTAGAGATATGGCAGTGGAATAAGATGAGGGGTGATCCTGATTCTCCACATGGTAGAATCCCTTAGGGAACTTCGCGGTGAATATTGGTGAAAGCTAAACAATGGGAAAAGGAAGATAAAATAATCATGATACGTTCGAGAAATGATCTTAAATTGTTATCTTTGTCTGTTTTTGTATGGTTTTTTTCATCCGAATGTTGCATGTAAATATATAGTATTTCCTCTGTTTTTTCAATTCGTTTATGAGTAATTGTCAGATTGATTGCGCCTAATGCAAAAGTTGCAATGTTAGATTTTTGTCAAGCTGTTTTAATCGGGCCATCGGGGGGGTAAGAATGATGATCATATCAAGTAGTTATATTTATAAATTATAATCAGA

mRNA sequence

ACACCAAAACTAGCTAACCGAGCAGAAGATAATCAGAAAAATTAAGAAATAGAAAGATATGTTGCAATCAAGATTAAGAGCAGCAATAATTAGCAAGACTAGATTAGGGACAAATTGGGGATTTATTACAAAAAGATTATTTTGCGAAGAAAATAGTGCAGCAACTCAAGGAGTTGCTGAAACTCAAGGCTATGCTCCTCTTCCAACTGGTCTTCCTGCTGATCCTGCCCTTCATTCTAGTGATCCTCCTCAGGGGGAAGAATCAGACGAAGAGTTAAAAGCAACATTGGCGGACGTTTCGCCCCGAACAACAGCCGATAAACCGGATCCACTACTCCAACCAAAGGCACCCGTTTCTTCCTCACCAAATATAGGACATACAGGGGTGGGCGGACTACCAGAGCCAAACACTCAACAAAGGCGTCAATTGTCAAACCGTCCGGATCAATCAGATGGGGTGGAAGCCCAAAAGGCACAGAAAAGAGCACAAGAGGAGGACAACAAAGAGTACTTCAAACACCACAAGGCATCTCCTTTATCAGAGATAGAGTTTGCGGATACGAGAAAGCCCGTAACGCAGGCCACGGATAGTCCTACGTCGTATTATGGAAAAGATTCGGACTTGATCCTGTGGAAGCCGGAGCAGCTTGATACGGCCGAGGATTCTTTGCTACGAGCTGTAGAGATATGGCAGTGGAATAAGATGAGGGGTGATCCTGATTCTCCACATGGTAGAATCCCTTAGGGAACTTCGCGGTGAATATTGGTGAAAGCTAAACAATGGGAAAAGGAAGATAAAATAATCATGATACGTTCGAGAAATGATCTTAAATTGTTATCTTTGTCTGTTTTTGTATGGTTTTTTTCATCCGAATGTTGCATGTAAATATATAGTATTTCCTCTGTTTTTTCAATTCGTTTATGAGTAATTGTCAGATTGATTGCGCCTAATGCAAAAGTTGCAATGTTAGATTTTTGTCAAGCTGTTTTAATCGGGCCATCGGGGGGGTAAGAATGATGATCATATCAAGTAGTTATATTTATAAATTATAATCAGA

Coding sequence (CDS)

ATGTTGCAATCAAGATTAAGAGCAGCAATAATTAGCAAGACTAGATTAGGGACAAATTGGGGATTTATTACAAAAAGATTATTTTGCGAAGAAAATAGTGCAGCAACTCAAGGAGTTGCTGAAACTCAAGGCTATGCTCCTCTTCCAACTGGTCTTCCTGCTGATCCTGCCCTTCATTCTAGTGATCCTCCTCAGGGGGAAGAATCAGACGAAGAGTTAAAAGCAACATTGGCGGACGTTTCGCCCCGAACAACAGCCGATAAACCGGATCCACTACTCCAACCAAAGGCACCCGTTTCTTCCTCACCAAATATAGGACATACAGGGGTGGGCGGACTACCAGAGCCAAACACTCAACAAAGGCGTCAATTGTCAAACCGTCCGGATCAATCAGATGGGGTGGAAGCCCAAAAGGCACAGAAAAGAGCACAAGAGGAGGACAACAAAGAGTACTTCAAACACCACAAGGCATCTCCTTTATCAGAGATAGAGTTTGCGGATACGAGAAAGCCCGTAACGCAGGCCACGGATAGTCCTACGTCGTATTATGGAAAAGATTCGGACTTGATCCTGTGGAAGCCGGAGCAGCTTGATACGGCCGAGGATTCTTTGCTACGAGCTGTAGAGATATGGCAGTGGAATAAGATGAGGGGTGATCCTGATTCTCCACATGGTAGAATCCCTTAG

Protein sequence

MLQSRLRAAIISKTRLGTNWGFITKRLFCEENSAATQGVAETQGYAPLPTGLPADPALHSSDPPQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPEPNTQQRRQLSNRPDQSDGVEAQKAQKRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPTSYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRIP

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16337.1	Spo16337.1	mRNA

Homology

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BLAST of Spo16337.1 vs. NCBI nr
Match: gi|902180726|gb|KNA09610.1| (hypothetical protein SOVF_152100 [Spinacia oleracea])

HSP 1 Score: 456.8 bits (1174), Expect = 2.200e-125
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


		  
Query: 1   MLQSRLRAAIISKTRLGTNWGFITKRLFCEENSAATQGVAETQGYAPLPTGLPADPALHS 60
           MLQSRLRAAIISKTRLGTNWGFITKRLFCEENSAATQGVAETQGYAPLPTGLPADPALHS
Sbjct: 1   MLQSRLRAAIISKTRLGTNWGFITKRLFCEENSAATQGVAETQGYAPLPTGLPADPALHS 60

Query: 61  SDPPQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPEPNTQQ 120
           SDPPQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPEPNTQQ
Sbjct: 61  SDPPQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPEPNTQQ 120

Query: 121 RRQLSNRPDQSDGVEAQKAQKRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPT 180
           RRQLSNRPDQSDGVEAQKAQKRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPT
Sbjct: 121 RRQLSNRPDQSDGVEAQKAQKRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPT 180

Query: 181 SYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRIP 229
           SYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRIP
Sbjct: 181 SYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRIP 228

[Close]

BLAST of Spo16337.1 vs. NCBI nr
Match: gi|731346757|ref|XP_010684624.1| (PREDICTED: uncharacterized protein LOC104899184 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 313.5 bits (802), Expect = 3.000e-82
Identity = 159/232 (68.53%), Postives = 186/232 (80.17%), Query Frame = 1


		  
Query: 1   MLQSRLRAAIISK-TRLGTNWGFITKRLFCEEN----SAATQGVAETQGYAPLPTGLPAD 60
           MLQSRLR AI  + +RLG NWG I+KR   +E     SAATQG A TQGYAPLPTGLPAD
Sbjct: 1   MLQSRLRGAIFGRRSRLGVNWG-ISKRFLSQEQEIDQSAATQGTAPTQGYAPLPTGLPAD 60

Query: 61  PALHSSDPPQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPE 120
           PA+HSSDPPQG ++D+ + AT A+   RTTAD+PD  +  K P S+SP IGHT VG   E
Sbjct: 61  PAIHSSDPPQGGDTDDAMNATAAEEQVRTTADEPDLFVSAKPPTSASPTIGHTEVGRPSE 120

Query: 121 PNTQQRRQLSNRPDQSDGVEAQKAQKRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQA 180
           PN QQRR+LS +P  S   EA KAQK+AQE+DNKEYFKHHKASPLSE+EFADTRKP+TQA
Sbjct: 121 PNIQQRRKLSEQPSPSTDAEAHKAQKQAQEDDNKEYFKHHKASPLSELEFADTRKPITQA 180

Query: 181 TDSPTSYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRI 228
           TDSPT+YYG D  +++WKPEQL+TAED+LLRAVE+W WNKMRGDPDSPHGR+
Sbjct: 181 TDSPTTYYGGDPGVLVWKPEQLETAEDTLLRAVEMWNWNKMRGDPDSPHGRV 231

[Close]

BLAST of Spo16337.1 vs. NCBI nr
Match: gi|460403820|ref|XP_004247384.1| (PREDICTED: uncharacterized protein LOC101261956 [Solanum lycopersicum])

HSP 1 Score: 144.1 bits (362), Expect = 3.100e-31
Identity = 90/212 (42.45%), Postives = 127/212 (59.91%), Query Frame = 1


		  
Query: 39  VAETQGYAPLPT---GLPADPALHSSDPPQGEESDEELKATLADVS-PRTTADKP-DPLL 98
           +A++Q Y    +   G  ADPA+HS  P +G++ +E +K +  +   P   + K  D  +
Sbjct: 18  LAQSQKYKSFSSSTGGRTADPAIHSG-PLEGDDLEESVKFSENEKKQPNIKSGKAKDAFV 77

Query: 99  QPKAPVSSSPNIGHTGVGGLPEPNTQQRRQLSNRPDQSDGVEA-------------QKAQ 158
            PK+P+ SS  I  TGV    +P TQQ+RQ+S+   +   +E              +   
Sbjct: 78  PPKSPIGSSQKIESTGVNQPIDPLTQQKRQISSNATEKTSLENASCAGLDGSPWPDESKS 137

Query: 159 KRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPTS-----YYGKDSDLILWKPE 218
           +  Q ED+KEYF HHK SPL+E+E ADTRKP+TQATD+P       Y      +++W+PE
Sbjct: 138 RGDQFEDDKEYFSHHKPSPLAEMEMADTRKPITQATDAPPDDGIPLYPAPWGGMMVWRPE 197

Query: 219 QLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRI 228
           QLDTAE++LLRA+EIW+ N MRGDPDSP GRI
Sbjct: 198 QLDTAEEALLRAMEIWKMNAMRGDPDSPQGRI 228

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BLAST of Spo16337.1 vs. NCBI nr
Match: gi|697181433|ref|XP_009599708.1| (PREDICTED: uncharacterized protein LOC104095314 [Nicotiana tomentosiformis])

HSP 1 Score: 141.7 bits (356), Expect = 1.500e-30
Identity = 90/201 (44.78%), Postives = 122/201 (60.70%), Query Frame = 1


		  
Query: 51  GLPADPALHSSDPPQGEESDEELKATLADVSPRTTADKP----DPLLQPKAPVSSSPNIG 110
           G  ADPA+HS  P +G++ +E +KA  A+   +    KP    +  + PK+P  SS  I 
Sbjct: 61  GRTADPAVHSG-PLEGDDLEESVKA--AENERKQPNIKPGKDNEAFVPPKSPTGSSQKIE 120

Query: 111 HTGVGGLPEPNTQQRRQ----------LSNRPDQSDGVEA-----QKAQKRAQEEDNKEY 170
            TGV    +P TQQ+R           LS       G++      +   + AQ ED++EY
Sbjct: 121 STGVNKPIDPLTQQKRHKSNVSRSNGALSLEDVSCVGLDGTPWPDEAKDRGAQLEDDREY 180

Query: 171 FKHHKASPLSEIEFADTRKPVTQATDSPTS-----YYGKDSDLILWKPEQLDTAEDSLLR 228
           FKHHK SPL+E+E ADTRKP+TQATD+P       Y   D  +++W+PEQL+TAE+SL+R
Sbjct: 181 FKHHKPSPLAEMEMADTRKPITQATDAPAGAGVAFYPAPDGGVMVWRPEQLETAEESLMR 240

[Close]

BLAST of Spo16337.1 vs. NCBI nr
Match: gi|565388239|ref|XP_006359886.1| (PREDICTED: uncharacterized protein LOC102584557 [Solanum tuberosum])

HSP 1 Score: 140.6 bits (353), Expect = 3.400e-30
Identity = 90/211 (42.65%), Postives = 129/211 (61.14%), Query Frame = 1


		  
Query: 40  AETQGYAPLPT---GLPADPALHSSDPPQGEESDEELKATLADVSPRT--TADKPDPLLQ 99
           A++Q Y    +   G  ADPA+HS  P +G++ +E +K    +       + +  D  + 
Sbjct: 19  AQSQKYKSFSSSTGGRTADPAIHSG-PLEGDDLEESVKVAENEKKQPNIKSVNAKDAFVP 78

Query: 100 PKAPVSSSPNIGHTGVGGLPEPNTQQRRQLS-NRPDQSD-------GVEAQ----KAQKR 159
           PK+P+ SS  I  TGV    +P TQQ+RQ S N  D++        G++      +++ R
Sbjct: 79  PKSPIGSSQKIESTGVNQPIDPLTQQKRQKSSNATDETSLKDVSCAGLDGSPWPDESKSR 138

Query: 160 AQE-EDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPTS-----YYGKDSDLILWKPEQ 219
            ++ ED++EYF HHK SPL+E+E ADTRKP+TQATD+P       Y      +++W+PEQ
Sbjct: 139 GEKFEDDREYFSHHKPSPLAEMEMADTRKPITQATDAPADDGIALYPAPWGGMMVWRPEQ 198

Query: 220 LDTAEDSLLRAVEIWQWNKMRGDPDSPHGRI 228
           LDTAE++LLRAVEIW+ N MRGDPDSP GRI
Sbjct: 199 LDTAEEALLRAVEIWKMNAMRGDPDSPQGRI 228

[Close]

BLAST of Spo16337.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQX8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_152100 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 1.500e-125
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


		  
Query: 1   MLQSRLRAAIISKTRLGTNWGFITKRLFCEENSAATQGVAETQGYAPLPTGLPADPALHS 60
           MLQSRLRAAIISKTRLGTNWGFITKRLFCEENSAATQGVAETQGYAPLPTGLPADPALHS
Sbjct: 1   MLQSRLRAAIISKTRLGTNWGFITKRLFCEENSAATQGVAETQGYAPLPTGLPADPALHS 60

Query: 61  SDPPQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPEPNTQQ 120
           SDPPQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPEPNTQQ
Sbjct: 61  SDPPQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPEPNTQQ 120

Query: 121 RRQLSNRPDQSDGVEAQKAQKRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPT 180
           RRQLSNRPDQSDGVEAQKAQKRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPT
Sbjct: 121 RRQLSNRPDQSDGVEAQKAQKRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPT 180

Query: 181 SYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRIP 229
           SYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRIP
Sbjct: 181 SYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRIP 228

[Close]

BLAST of Spo16337.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0L3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g165170 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.100e-82
Identity = 159/232 (68.53%), Postives = 186/232 (80.17%), Query Frame = 1


		  
Query: 1   MLQSRLRAAIISK-TRLGTNWGFITKRLFCEEN----SAATQGVAETQGYAPLPTGLPAD 60
           MLQSRLR AI  + +RLG NWG I+KR   +E     SAATQG A TQGYAPLPTGLPAD
Sbjct: 1   MLQSRLRGAIFGRRSRLGVNWG-ISKRFLSQEQEIDQSAATQGTAPTQGYAPLPTGLPAD 60

Query: 61  PALHSSDPPQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPE 120
           PA+HSSDPPQG ++D+ + AT A+   RTTAD+PD  +  K P S+SP IGHT VG   E
Sbjct: 61  PAIHSSDPPQGGDTDDAMNATAAEEQVRTTADEPDLFVSAKPPTSASPTIGHTEVGRPSE 120

Query: 121 PNTQQRRQLSNRPDQSDGVEAQKAQKRAQEEDNKEYFKHHKASPLSEIEFADTRKPVTQA 180
           PN QQRR+LS +P  S   EA KAQK+AQE+DNKEYFKHHKASPLSE+EFADTRKP+TQA
Sbjct: 121 PNIQQRRKLSEQPSPSTDAEAHKAQKQAQEDDNKEYFKHHKASPLSELEFADTRKPITQA 180

Query: 181 TDSPTSYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPDSPHGRI 228
           TDSPT+YYG D  +++WKPEQL+TAED+LLRAVE+W WNKMRGDPDSPHGR+
Sbjct: 181 TDSPTTYYGGDPGVLVWKPEQLETAEDTLLRAVEMWNWNKMRGDPDSPHGRV 231

[Close]

BLAST of Spo16337.1 vs. UniProtKB/TrEMBL
Match: M1D4Q9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031827 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.400e-30
Identity = 90/211 (42.65%), Postives = 129/211 (61.14%), Query Frame = 1


		  
Query: 40  AETQGYAPLPT---GLPADPALHSSDPPQGEESDEELKATLADVSPRT--TADKPDPLLQ 99
           A++Q Y    +   G  ADPA+HS  P +G++ +E +K    +       + +  D  + 
Sbjct: 19  AQSQKYKSFSSSTGGRTADPAIHSG-PLEGDDLEESVKVAENEKKQPNIKSVNAKDAFVP 78

Query: 100 PKAPVSSSPNIGHTGVGGLPEPNTQQRRQLS-NRPDQSD-------GVEAQ----KAQKR 159
           PK+P+ SS  I  TGV    +P TQQ+RQ S N  D++        G++      +++ R
Sbjct: 79  PKSPIGSSQKIESTGVNQPIDPLTQQKRQKSSNATDETSLKDVSCAGLDGSPWPDESKSR 138

Query: 160 AQE-EDNKEYFKHHKASPLSEIEFADTRKPVTQATDSPTS-----YYGKDSDLILWKPEQ 219
            ++ ED++EYF HHK SPL+E+E ADTRKP+TQATD+P       Y      +++W+PEQ
Sbjct: 139 GEKFEDDREYFSHHKPSPLAEMEMADTRKPITQATDAPADDGIALYPAPWGGMMVWRPEQ 198

Query: 220 LDTAEDSLLRAVEIWQWNKMRGDPDSPHGRI 228
           LDTAE++LLRAVEIW+ N MRGDPDSP GRI
Sbjct: 199 LDTAEEALLRAVEIWKMNAMRGDPDSPQGRI 228

[Close]

BLAST of Spo16337.1 vs. UniProtKB/TrEMBL
Match: A0A022S1Y4_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024267mg PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.300e-30
Identity = 98/252 (38.89%), Postives = 137/252 (54.37%), Query Frame = 1


		  
Query: 2   LQSRLRAAIISKTRLGTNWGFITKRLFCEENSAATQGVAETQGYAPLPTGLPADPALHSS 61
           +QS+L A  ++ +R+     F  KRLF  +      G A T       TG  ADPALHS 
Sbjct: 1   MQSKLAATAVNFSRIVL---FGPKRLFLGQRL----GCATT-------TGRTADPALHSV 60

Query: 62  DP----PQGEESDEELKATLADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVGGLPEPN 121
           +P    P     DE+L+    +     T +  DP +  K+P+ S+P +  TG+G    P 
Sbjct: 61  EPEDVYPTEAIEDEKLRHRPEN---EPTGNGSDPYVPQKSPIDSAPKLESTGIGPRTNPI 120

Query: 122 TQQRRQLSNR------------------PDQSDGVEAQKAQKRAQEEDNKEYFKHHKASP 181
            QQ+R+ S                    P+++D    +KA++  Q  DNK+YFKHH+ASP
Sbjct: 121 AQQKRRRSTENCTKIDDVSCAGIDGSPWPEEAD----RKAEREEQAADNKDYFKHHRASP 180

Query: 182 LSEIEFADTRKPVTQAT----DSPTSYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNK 228
           LSEIE ADTR  + +A+     S T  Y     ++ W+PEQLD+AEDSL RA EI++WN 
Sbjct: 181 LSEIEIADTRGMIAKASGGTAQSKTFGYEWSGGIMGWRPEQLDSAEDSLRRATEIFKWNA 231

[Close]

BLAST of Spo16337.1 vs. UniProtKB/TrEMBL
Match: A0A067K8W4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13990 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.000e-29
Identity = 96/246 (39.02%), Postives = 127/246 (51.63%), Query Frame = 1


		  
Query: 11  ISKTRLGTNWGFITKRLFCEENSAATQGVAETQGYAPLPTGLPADPALHSSDPPQGEESD 70
           + ++RL T    + + LF  +N A        +G+A   TG  ADP + S+      E D
Sbjct: 1   MEQSRLATTATRLYRILFLAQNQA------RQRGFAASSTGRVADPDIFST------ERD 60

Query: 71  EELKATLADVSPRTTAD-----------------------KPDPLLQPKAPVSSSPNIGH 130
            ELK T+    P  T D                       + +PL Q K P +SSP +  
Sbjct: 61  RELKPTVPSGEPEETRDHYEPETAKRGTEAEAETEHRTSKETEPLAQSKLPYASSPRLES 120

Query: 131 TGVGGLPEPNTQQRRQLSNRPDQS------DGVEAQKAQKRAQEEDNKEYFKHHKASPLS 190
            GV    +P  QQ+R+ S    +       DG    + ++   EED  EY++HHKASPLS
Sbjct: 121 IGVNHPLDPYVQQKRENSTVTAEEISCAGLDGTPLPEDKETQGEEDENEYYRHHKASPLS 180

Query: 191 EIEFADTRKPVTQATDSPTSYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWNKMRGDPD 228
           EI+ ADTR P+ +ATDS T+  G   D+I W PEQLDTAE++L RA  IW  N MRGDPD
Sbjct: 181 EIKMADTRTPIRRATDS-TADAGLGRDVIGWLPEQLDTAEEALERARRIWMENAMRGDPD 233

[Close]

BLAST of Spo16337.1 vs. TAIR (Arabidopsis)
Match: AT1G02700.1 (unknown protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.700e-27
Identity = 81/194 (41.75%), Postives = 116/194 (59.79%), Query Frame = 1


		  
Query: 54  ADPALHSSDPPQGEESDEELKAT--LADVSPRTTADKPDPLLQPKAPVSSSPNIGHTGVG 113
           ADPA++  DP   ++      A   + D +PR + ++  PL+ PK+P +++  +  T VG
Sbjct: 48  ADPAIYPRDPEGMDDVANPKTAAEEIVDDTPRPSLEE-QPLVPPKSPRATAHKLESTPVG 107

Query: 114 GLPEPNTQQRRQ----------------LSNRPDQSDGVEAQKAQKRAQE-EDNKEYFKH 173
              EP+ QQ+R+                L   P   D  E ++ ++R  E E ++E++KH
Sbjct: 108 HPSEPHFQQKRKNSTASPPSLDSVSCAGLDGSPWPRDEGEVEEQRRREDETESDQEFYKH 167

Query: 174 HKASPLSEIEFADTRKPVTQATDSPTSYYGKDSDLILWKPEQLDTAEDSLLRAVEIWQWN 228
           HKASPLSEIEFADTRKP+TQATD      GK  D+I W PEQLDTAE+SL++A  I++ N
Sbjct: 168 HKASPLSEIEFADTRKPITQATDGTAYPAGK--DVIGWLPEQLDTAEESLMKATMIFKRN 227

The following BLAST results are available for this feature:

BLAST of Spo16337.1 vs. NCBI nr
BLAST of Spo16337.1 vs. UniProtKB/TrEMBL
BLAST of Spo16337.1 vs. ExPASy Swiss-Prot
BLAST of Spo16337.1 vs. TAIR (Arabidopsis)

BLAST of Spo16337.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902180726\|gb\|KNA09610.1\|	2.2e-125	100.	hypothetical protein SOVF_1521...	[more]
gi\|731346757\|ref\|XP_010684624.1\|	3.0e-82	68.5	PREDICTED: uncharacterized pro...	[more]
gi\|460403820\|ref\|XP_004247384.1\|	3.1e-31	42.4	PREDICTED: uncharacterized pro...	[more]
gi\|697181433\|ref\|XP_009599708.1\|	1.5e-30	44.7	PREDICTED: uncharacterized pro...	[more]
gi\|565388239\|ref\|XP_006359886.1\|	3.4e-30	42.6	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo16337.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QQX8_SPIOL	1.5e-125	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C0L3_BETVU	2.1e-82	68.5	Uncharacterized protein OS=Bet...	[more]
M1D4Q9_SOLTU	2.4e-30	42.6	Uncharacterized protein OS=Sol...	[more]
A0A022S1Y4_ERYGU	5.3e-30	38.8	Uncharacterized protein OS=Ery...	[more]
A0A067K8W4_JATCU	2.0e-29	39.0	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo16337.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo16337.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G02700.1	1.7e-27	41.7	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35985	FAMILY NOT NAMED	coord: 90..227 score: 2.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0046482	para-aminobenzoic acid metabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000785	chromatin
molecular_function	GO:0016920	pyroglutamyl-peptidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo10765	0.69	Barchart \| Table
Spo03828	0.68	Barchart \| Table
Spo07912	0.65	Barchart \| Table