Spo16383 (gene)

Overview
NameSpo16383
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCytochrome c oxidase copper chaperone
Locationchr2 : 41879331 .. 41887392 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTTTGACAACTCTATTGGGACTTTTTGGAATTTAGAGTAAGTACATTGTACATATCAATGGACAATGCCGGCTACTTATTAAAGTCTTTTGTTAATGAATTAATTGGCCGGAGATAGAGAAAACAGTCTGCTAAATAATTTTAAGGCGTTTCTTTGTTTTAATAATTGAGGAGTAATGGTTCTATGTGATTAATTTTTCTTTTTCAAATGTAGAAAGGACTTATATTATCATTATTATGATCCTATTTATATTTGTATTTGAAATTTCTTGTTATTTTTGTAGTAGCGTTTATGTGATTTAAATTTACCAAGAAAATTTCCCTTGGCCCCCCTAATAATTTGTTCAGGATCCGCCACTGGTCCAAGCCTCTAAGGTAGTAAGGTATGTTCTTCTTCAATCCATAATCTACATGTTTTTTTGTTGATTTCAATATTAAATTTAAGACTTTGAAATTGGGGAATAATCCGTCAATCTAATCCGATTTCATGTTCTAAATAGGTGTACTACAATGAATTCCATTGCATTTTTCATGAGTTGTAAAATTTGTGTTATGTGTTTTGTGTTTCGGACTGTATTGATAAACCCTTAAATTAATTTTCTGTATTATTTATGAATACCCTCAAAATTATTGAAAAAATGGTATTTCTTGTAGGGAAGTTGTTAAGTTTTCCCCATAGTGGTTATTGAATTTCATCCGATCAATTTTTTTTTTTTTGATAATTTGGTGTTATTTTATTAATGCTCATGGCAAAAACTACTCTTTACATTGAGTGTCTGTTACAAGAACGAGCACTAATGACATGATCTGGGGATCGCTTGAGACAGCCCATTAGAGCCACGCAATGAACTCGTCCCTTCTAGTGAGTCCCTGTTTGGCCATGGAGTCAGCCACCATGTTTGTTTCACGGCTTTTGTATACGATTGTGATCCCTCTTTCCCCCGTCATTGCATTTCGAATGAAGTTTATGATAAATGTGAGGTTCCATGGACCACCATTCTCTCCATTGCACCATTTTACTGCGTTTGCCGAATCCGATTCCACAAAGATATGGCTGTGTGCGTACCAATCAATGGTGGATGAGATTTTGATTGCCCTATGTATTGCAAGGATCTCCCCATGATTTATTTCCATGTATGGTATTGGGCTTGAAAAGAGGCACAAGAATTTCCCTTGATGGTCTCGAAGCACACCCTCTATGGCCGATTTTGACTCATTGATTTTTAGGGAAGCATCCACATTCCATTTGATCGAAGGTTGAGAGGGCGGTGTCCATACAGGAGTATTTTGGCATACAACCACTTTGAATTTTGCTGGCATGGTCATCTTCCAGTCTAGACAAAGGGGGTTTCTAATTATCTCATTTTGATCATAGGGGAATGGGTCTCCCCATCCCTTTATCCACTAACTAAGTCTCATGAGTATCAGGTTTTGAAGTTGGGCTTGTGAACATGAAATGTTCTCAAAACACCTACTGTTTCTCTCCCTCCACAGAGTCCATATTATTATGATGAAGCTTGCCCCCACACTTTCTTGAAAAAAAAAACCCTTGTTAGGGGGGATCCATTGGTGAAAAGCTTCGAGTGTTGTTTGCGGAAAGCACCAATGAAGACACTAAATGTTCAGCCACCAGTTCCATATGTTCGACGCCATGGGACAATGGATGAAAATGTGATCACATGATTCTATCACATTGGTGCAGAGGGTACATAGACCATCAGGGGGTTCCAAAATACCGAGTCTTACTAATTTTTCTTTGGTGTTAAGCTTCCCAAGTAAGGCAAGCCATGAAAAGATTTCAATACGGTACGGCACTAGGTTCCTCCATAACCCTTGTATCAGTCTTTGCGGGCCGTTAATGTCATTTTTTGCCAACTCCACGTTGAAAGACTTGACCGAAAAAACTCCTTTTTTATGGGGAGTCCATATGAGCTCATCCTTATCATTCATTGAGAGGCAGACGGGTTCAAGTAATTGTTGTAACCGGCCAAACTCTTGCTTGTCTCGTGGCCTTAGGGGGCGGCTCCAATCAAAGGCCCACTCCCATTTTATTCCATCCCAGAAGCATGAGGATGCCACTGTGGTGTTTTTTGCATTGCTTAGTCGGAACAGACGTGGACAGATTGCCTTGAGAGGCAAATCCCCTAGCCACACGTCGTGCCAAAATAGAGAGTTCATGCCATTTCCAATCCTTTTCCTTATACCGGATTTGAGGAGAGCCTTTGATTGTGGGTTTGTTAGTAGTGTTGCACATATGCTCTTCCATGGGCCTCCATGGGAGGATGTTTGGAGGTCTAGTATCGAGAAGAGAGGCCCGTACTTGTATTTTTCATGAATCAGTTTTCGCCATTAAGGTTTGAGTGTCTGACACGTATCTCCACACCCATTTGGCAAGTAGGGCAAGATTTTTGGTTTGCAAGTTTCCCATATTTAAGCCTCCTAGAGACTTTGGGAGTTCGATTAGGTGCCATGTCGCCGGGGGAAGGCGGTTTTTGCCATTAGTTCCACACCAAAAAAACTGCCTCTGTAGTCTCCTCAGCTTATCAATAACCCCTATTGGAGTTGGAAAGATGGACATGTAGTACATGGGAAGGCTTGAGAGTGATGCCTTGATGAGGGTGGCTCGACCTCCAAGGGAGAGGAGCGATCCTTTCCATGTTGCAAGTTTCCTGGTCATTCGGTCCATGATGGGGTCCATGTTATGATTCTCGATGGGTTGCCACCAATTGGGAGGCCAAGATAGGTATACGGGAGAGTCCCAATTTTGCAGAGGAGAGTGTCAGCAGCTTCTTGCAGCCATGTTTTTTCTACATTAATCCCATAAATTGAGCTTTTATGAAAGTTTATCTGTAGCCCTGAAGAGAGTTGGAACAAGATAAGTGTCTTCTTGACATTCAGCAGGGAGCGCATGTTAGGGGTGCAAAGCATTATAGTATCATCTGCATATTGTAGATGGAAGATTTTTGTGCCATTCCTGCAGATTTCAATTCCTTTCCATAGACCAAGTGAGATAGCCTTATGGAACAACAAGTTTAGAGGCTCCACCGCGATATTGAATAGAAAGGGCGAGAGTGGGTCGCCTTGGTGAAGCCCCCTTTGAAGTTTGAAAGTATGGGTTGGTGAGCCATTAATGATGATTGAGGCCGATGCTGTCATTACGCACGTACGGATCCATTGTCTCCATTGGGATGGGAAGTGCATTTGTTCAAGTACCCAATCTAGGTATCCCCATGAGATACTGTCAAAAGCCTTATGAAAATCAAGCTTTAGGATGACTGCTTCTGCTTTGTTTCTCCTGCAAGAGTCAATTATTTCACTCGCTATCAGCACTCCATCTAGTTTTTGTCTGCCCTTGATGAACGAGGATTGTTGCGCACCAATGAGAGAGCCCATCACTTTCTGGAGACGTCGGGCAAGTATCTTGGCAATTATTTTATATACGCACCCTACCATACTTATAGGGTGGTATTCTTTGAAACTCGTTGGGCTTGCTGTCTTTGGAATAAGGGCTATGAAAGCGGTGTTGCAGCCCCTGGGTAAGCGGGAGGATTCCCAAAATTCTGAAACCAGTTCATATACATCTGATTTTATCACTTCCCATGAGCTTTTAATAAACTTGAAATTGAAACCATCGGGTCCGGGGGCCTTCGACCCATTGCACGATGCCACTGCATCGTCAATTTCCTCCTTGGTGAATTTCTCAATAAGTTGTTCTGCTTGTGTGGGTATAAGAGTATTGAATTCCAGTCCCTGAAAAACGGGCCTTTGACGATTTTCTTCTGTAAAGATTTTTTCGAAGAACTTGACTGCTTCGGTTTTAATGGCACTAGGATCCTCAATCTTGTTGTTCTCAACCAAGATATTATCAATGTTATTTTTCCGTTTTCTCATTGTTGCCACTGTGTGAAAAAATCTTGTGTTTTTATCCCCTTCCTTGAGCCACTTTGAGCGAGAATTTTGAGCCCAGTAGGACTCCCTTCTTTTTAACCAGTCCCATAGCTCCAATTGTGCTTTTTTCCTTTCCTGTATTTCTGCATCCTGCAAGTTTCTTTGGCCTGCAATTTGGTCGATGTCATGAATCTGACATTCTAGGGTATTGATTTTCCCCTCTATTTGGCCAAATTCTGTTGCATTCCAGCTTCTCAGTTTTGCTTTAACATTTTTTAGCTTGTCTACAATCGATAGATTTTCAGATGTTGCCCATGTCTCCTTTATGATTTTTGCACATCCCGGATGGGACAGCCAGCAGTTGAGGAAGCGGAAAGGTTGTCCCCAGTTCTTTTCGTGCGAGTGTACAAGGAGTGGGCAATGGTCTGAGATTGACCTTTTCAGCAGTGAGACCTTTAGAGGAGGGAAGGTTGTGATCCATTGTGCCGTTACAAACAGACGATCAAGTTTGCTTTTCGATTGTCCTCTAAACCGTGTAAAGCTCCCGTTTGATGATGGGATTTCTAATAATTGCATCTCTTGCAGGAAGTTTTTGAAATCATTCGACCCATTAGGTGATAATGTGATATATGTTGGCTGCCTCGGTCTTCGCTATCAAGAATTTCATTGAAATCTCCAATTAGAAAGCATGGCAGATTTGTTGCATCTTGAAATTCAACTATACTGTTCCAAACTTCCGCTCTATCCGTGATTGAGCATGGATTTTATATGCTAATGAGAGTACATTTAAAGGCTAGTGATTGAATTTCACCAGAGAGGGCAATCCAGTGTTTCTCACACCGTGACTGATCAAGAGAGAAAAAGTTTGAGTTCCATATAGCCAGCAATCCTCCAGAGTTTCCTTGAGAGGGGGATACAATCCATTGTAGTTGTGCCTCTTTCCAAATTGAGTTTATGAGTCTATCATTGGGACTCTCTAATTTCGTCTCTTGGATAAACACAAAGTGAGGAGAGTGTTTATTTATTAGGCTTCGACATGAACTTCTTTTGACTTTTGCACCAAGTCCACGTATATTCCATGATAGGACAATCATCAGATAATCAGTTTTGCAATGAGAGGGGGTTTGCCTTAAGAAGTCGTCTGCCAATCCTCGACCTGCCTTTCGAGGATTAATTCAATTCGAGCCTGTAGGATGCTTGTTGTTCCGTCATACTTTAGGCCCAATTGCTCAGCAAGTGCAAGGACATCGGCTGCAGAAATTGTGTTTGGGTGAGGATTTGCTTGGTTAGTTAGTAAGGGTACTATGATGGATGGTGAGGGGGAGGAGAGTTAAGGGAGTTTTTCGGTGGACGTTGAGTTTTTTTGAGGGCTTTCTTTGCTCTTTTTTCTGTGTGTGCTTTCTTGATATTGCAGGGGATGTAATCTTCGAAACCTGGAGGGAACAGTGGTCCAGACGAGAAGGAGGAGGATCGTGTCACTTTGTTTGGCCTGATGAGTGGTCCAAACTTATTATGTATTGAGATTGGTGTGTTTGTTTGGCTTTTTGTGGGGCTTTTTTGTGTGGATTGAAAGGAGGGGTGGTGGTCAGGTGGCCCAAATTTTGAGTGGGCTGGGGAGATTTGGTGTGCTGGTTGGGATGAGTCAGTTAAGGGGTTTATTGGTTGGGGGGAGGGATTTTTGTCTGACTTGGGAGGGGGGTCCAAGGGAGGTGAATCTCGATTCCCTTTGTTTCTGTTTTGGGAATCGGGGGTAGTAATAATGGCAGTCTTTTTTCCTGTTGATTCAGAGGATTTGGGAAAAGAATCTTGGGACTTGTGTGGACTGTCATTTGGTTGGGTTGGGCTGCACGCGCCGTCGTCTTCATCAGAAGAGGGGGGTGGCGTTGTTTGCTTCATCACCATTTTTGGGCAATGGCATTCCTCTGAGATGCATACTATGTGTAGAAGTTCCGCAATTTCAATTGCAATTTTACAGTTGATTGAGAATAGGCAATCTGTTAGAATTGTGACTCTTGCACAGTCAAAACCTGAGTACTCAACAGATAATATCCTGCCAAATATGCAACCAATTCTATAGAAATTCTCATATCCCCATCCATTCAGTGGTACTCCATATATTTTGATTTTTGTTTCCCTCCATTTTGAAGCACACACTTCATTGACATTTCGAATGTCCATAAACCATCTGTGGAGCCATTCACTTTCTATCATAGCTGTTTTGTCCTCAATTGTTTCAAATGTTAATAGGTGCAGCATACCCCCCATCGGTTTAATTGAGAGACATGTTACCCCTTCTGATAGTATGTGTTCAAGTATGGTGTCTGATGAGAGTGAAGAGTTTGACGTTGCAATGGCGCTTCTTTTGAAAATTTCTGCATTTTCTGTTGATTTTGTTCCTTTTATGGTGATAAATTCCTCGCCCTCTATCTCCTTAACTACCAGGTCATCCCTGATGTTTTCAATTTGTTCACCCAGTATGCGGGAACTCATTCTTCTCGCACGACTCGGTACGAATTTGAAGCAATCCGGTTGTGGTGATGTTCCATTGGGGGGGATGTTTTGATTTTTTGGATTCAATTCGGGTTGTGGTTTCGATTTATGTTCTTTGTGGTTCTGGTTTGACTGTTTTTTAGGTTAAGGGAGACTTCCTTGTAGGATCTGTGATCCCTTGTGGATGAGTGGGGTAATTTGGTGGTTTGTCTTTCTTGGGTTTTTTTTAATTGGTGGTGTGGGTTGGTGTTTGGAGGTGGCGCAGTTGGAAAAGCTTTGTCGCGCTTCGCCGGATGGGTACGGATTCGGTTGTTGCCCATTACCCGTCCGTCTTCTCCTCTGATTGCTCTTACCAGGGAGACATTGGATCTGAACTTGACGAAGGCGTAGCGGTACCTCCGGTGGGGATGAGCTACCGCCGGGATATGGATGTTTTCGATTTCTCCGTGCCGGCTGAAGAGGTGATGGAGGTCTTGTCGGATTATGTTTTCAGGTAGGAAGTTAATGAAGCAGGTTTTTTGGGCTATGTTGGTGGTTGTTCTCGGTTTTTTCCGGCTGACCGTAGTCCAGTGGTGGGGGTTTGTGTTTCTCTCACTACGGTCTCTCTCTCTCTCCATCGTTTTGATTGCTATGTTGATATTCATCCGATCAAATTAGTTAATATTTTGATGATTTAGTTGGTTTATGATTCCCGTTTTAAAAACTTGTGAGAAATGTGGATGGTTGGTTAGTTAATCTTCAATTTACCAATTGTATGTTCTATAATTTTCACAGGGTTGTAATCATGGGAGGAGTTACATCTTCAAGTATAGGTGTACCGGCAGAGCAAAAGAACCCGAAAACAATCACGAAAACTACTGAGCAGGATCAAAAGCCGAAAAAGAAGATTTGTTGTGCGTGCCCCGAAACTAAGAAGCTGAGAGATGAATGTATAGTACAGAATGGTGAAGATGCTTGTGGCAAGTGGATCGAGGCGCATAAGCAATGCCTTCGTGCTGAGGGATTTAATGTTTGATGAAGAATCAGTAATCAGAAATTTCGAGCTCGTGAAATTTGCAAGATAGGTAGTTCTTTTTTCTGCTATACACATCTTGATCACATTTTTGTGAATAAAAGGTATATGTACTATGTGAGATGAATTGTTATCTTGCAGCTAGATGGCATATCCGTTAGACACTTAGGCTCTGTTTGGTGGGGTGTAAATCGTGTAATACGTTTTCCGGGAAAATGGTTTTCATCTATTTTCAATTTTACATTGTTTGGTTTGCGAAAGAGTGTAAAACCATTATTCATAGGAGTAAAATTGATCTCCCAATGATGGAAAACCATTTTCCCTCCAAAATGAAGGGAATTTTTTTTTTCCTTCCTTTTGCCTTATCTCTCTTGTACACTCTTCTCACTGCTTGTTTACTTTTCCTTTCATTTTTCTTACATGGAATCAAACAACAAAAAATTAATTTTGGAATGTATTTTACAATGTAAATTGTTTTCCATGAATATTATTTTACTTGAAAATGTGTTACATTCAACCAAACGGAGCCTTAGACTCTTGCCAATCTTTGTGATTTTTTACCAGACATTGATGGTATAGACATATCAAGATATTTTATGCTACATTTTGCACTTGTTTACTTTGATGCTGGTTGATGAATGAATTATATGGCACGGTTCATCTATGT

mRNA sequence

ATGAAAGATCCGCCACTGGTCCAAGCCTCTAAGGTAGTAAGGGTTGTAATCATGGGAGGAGTTACATCTTCAAGTATAGGTGTACCGGCAGAGCAAAAGAACCCGAAAACAATCACGAAAACTACTGAGCAGGATCAAAAGCCGAAAAAGAAGATTTGTTGTGCGTGCCCCGAAACTAAGAAGCTGAGAGATGAATGTATAGTACAGAATGGTGAAGATGCTTGTGGCAAGTGGATCGAGGCGCATAAGCAATGCCTTCGTGCTGAGGGATTTAATGTTTGATGAAGAATCAGTAATCAGAAATTTCGAGCTCGTGAAATTTGCAAGATAGGTAGTTCTTTTTTCTGCTATACACATCTTGATCACATTTTTGTGAATAAAAGGTATATGTACTATGTGAGATGAATTGTTATCTTGCAGCTAGATGGCATATCCGTTAGACACTTAGGCTCTGTTTGGTGGGGTGTAAATCGTGTAATACGTTTTCCGGGAAAATGGTTTTCATCTATTTTCAATTTTACATTGTTTGGTTTGCGAAAGAGTGTAAAACCATTATTCATAGGAGTAAAATTGATCTCCCAATGATGGAAAACCATTTTCCCTCCAAAATGAAGGGAATTTTTTTTTTCCTTCCTTTTGCCTTATCTCTCTTGTACACTCTTCTCACTGCTTGTTTACTTTTCCTTTCATTTTTCTTACATGGAATCAAACAACAAAAAATTAATTTTGGAATGTATTTTACAATGTAAATTGTTTTCCATGAATATTATTTTACTTGAAAATGTGTTACATTCAACCAAACGGAGCCTTAGACTCTTGCCAATCTTTGTGATTTTTTACCAGACATTGATGGTATAGACATATCAAGATATTTTATGCTACATTTTGCACTTGTTTACTTTGATGCTGGTTGATGAATGAATTATATGGCACGGTTCATCTATGT

Coding sequence (CDS)

ATGAAAGATCCGCCACTGGTCCAAGCCTCTAAGGTAGTAAGGGTTGTAATCATGGGAGGAGTTACATCTTCAAGTATAGGTGTACCGGCAGAGCAAAAGAACCCGAAAACAATCACGAAAACTACTGAGCAGGATCAAAAGCCGAAAAAGAAGATTTGTTGTGCGTGCCCCGAAACTAAGAAGCTGAGAGATGAATGTATAGTACAGAATGGTGAAGATGCTTGTGGCAAGTGGATCGAGGCGCATAAGCAATGCCTTCGTGCTGAGGGATTTAATGTTTGA

Protein sequence

MKDPPLVQASKVVRVVIMGGVTSSSIGVPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGEDACGKWIEAHKQCLRAEGFNV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16383.1Spo16383.1mRNA


Homology
[Close]
BLAST of Spo16383.1 vs. NCBI nr
Match: gi|902169814|gb|KNA07714.1| (hypothetical protein SOVF_169340 [Spinacia oleracea])

HSP 1 Score: 144.1 bits (362), Expect = 1.300e-31
Identity = 69/85 (81.18%), Postives = 74/85 (87.06%), Query Frame = 1 

		  

Query: 18 MGGVTSSSIGVPAEQKNPKTITKTT---------EQDQKPKKKICCACPETKKLRDECIV 77
          M GVTS+S+GVPAEQKNP+T+TK T         EQDQKPKKKICCACP+TKKLRDECIV
Sbjct: 1  MRGVTSASVGVPAEQKNPETVTKATDQEMVTKASEQDQKPKKKICCACPDTKKLRDECIV 60

Query: 78 QNGEDACGKWIEAHKQCLRAEGFNV 94
          QNGEDACGKWIEAHKQCLRAEGFNV
Sbjct: 61 QNGEDACGKWIEAHKQCLRAEGFNV 85
[Close]
BLAST of Spo16383.1 vs. NCBI nr
Match: gi|731366294|ref|XP_010694991.1| (PREDICTED: cytochrome c oxidase copper chaperone 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 122.9 bits (307), Expect = 3.000e-25
Identity = 57/76 (75.00%), Postives = 66/76 (86.84%), Query Frame = 1 

		  

Query: 18 MGGVTSSSIGVPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGEDACGK 77
          MGG+ +   GVPA Q N + ITK +EQ+QKPKKKICCACP+TK+LRDECIV++GEDAC K
Sbjct: 1  MGGMLTG--GVPANQNNQEAITKASEQNQKPKKKICCACPDTKRLRDECIVEHGEDACTK 60

Query: 78 WIEAHKQCLRAEGFNV 94
          WIEAHKQCLRAEGFNV
Sbjct: 61 WIEAHKQCLRAEGFNV 74
[Close]
BLAST of Spo16383.1 vs. NCBI nr
Match: gi|515416734|gb|AGO67234.1| (cytochrome c oxidase copper chaperone [Silene vulgaris])

HSP 1 Score: 113.6 bits (283), Expect = 1.800e-22
Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 1 

		  

Query: 18 MGGVTS----SSIGVPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGED 77
          MGG+++    S +G    ++N +++TKT E +QKPKKKICCACP+TKKLRDECIVQ+GED
Sbjct: 1  MGGLSTLTNTSIVGSKPAEQNQESVTKTAESNQKPKKKICCACPDTKKLRDECIVQHGED 60

Query: 78 ACGKWIEAHKQCLRAEGFNV 94
          AC K IEAHKQCLRAEGFNV
Sbjct: 61 ACSKRIEAHKQCLRAEGFNV 80
[Close]
BLAST of Spo16383.1 vs. NCBI nr
Match: gi|764565439|ref|XP_011461813.1| (PREDICTED: cytochrome c oxidase copper chaperone 1-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 112.8 bits (281), Expect = 3.100e-22
Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 1 

		  

Query: 18 MGGV----TSSSIGVPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGED 77
          MGG+    TSS++ +PA Q N  +    +  D KPKKKICCACP+TKKLRDECIVQ+GED
Sbjct: 1  MGGLVTENTSSALALPAMQPNQGSAVANSSSDTKPKKKICCACPDTKKLRDECIVQHGED 60

Query: 78 ACGKWIEAHKQCLRAEGFNV 94
          AC KWIEAHK CLRAEGFN+
Sbjct: 61 ACSKWIEAHKTCLRAEGFNI 80
[Close]
BLAST of Spo16383.1 vs. NCBI nr
Match: gi|823198134|ref|XP_012434504.1| (PREDICTED: cytochrome c oxidase copper chaperone 1 [Gossypium raimondii])

HSP 1 Score: 109.0 bits (271), Expect = 4.500e-21
Identity = 51/79 (64.56%), Postives = 63/79 (79.75%), Query Frame = 1 

		  

Query: 18 MGGV---TSSSIGVPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGEDA 77
          MGG+    +S++ +P  Q+N ++   TT  + KPKKKICCACPETKKLRDECIVQ+GE+A
Sbjct: 1  MGGLPTQNTSTLALPGLQQNQESAKPTTGAESKPKKKICCACPETKKLRDECIVQHGEEA 60

Query: 78 CGKWIEAHKQCLRAEGFNV 94
          C KWIEAH+ CLRAEGFNV
Sbjct: 61 CAKWIEAHRICLRAEGFNV 79
[Close]
BLAST of Spo16383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKE6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_169340 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 8.800e-32
Identity = 69/85 (81.18%), Postives = 74/85 (87.06%), Query Frame = 1 

		  

Query: 18 MGGVTSSSIGVPAEQKNPKTITKTT---------EQDQKPKKKICCACPETKKLRDECIV 77
          M GVTS+S+GVPAEQKNP+T+TK T         EQDQKPKKKICCACP+TKKLRDECIV
Sbjct: 1  MRGVTSASVGVPAEQKNPETVTKATDQEMVTKASEQDQKPKKKICCACPDTKKLRDECIV 60

Query: 78 QNGEDACGKWIEAHKQCLRAEGFNV 94
          QNGEDACGKWIEAHKQCLRAEGFNV
Sbjct: 61 QNGEDACGKWIEAHKQCLRAEGFNV 85
[Close]
BLAST of Spo16383.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BDG1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096790 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.100e-25
Identity = 57/76 (75.00%), Postives = 66/76 (86.84%), Query Frame = 1 

		  

Query: 18 MGGVTSSSIGVPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGEDACGK 77
          MGG+ +   GVPA Q N + ITK +EQ+QKPKKKICCACP+TK+LRDECIV++GEDAC K
Sbjct: 1  MGGMLTG--GVPANQNNQEAITKASEQNQKPKKKICCACPDTKRLRDECIVEHGEDACTK 60

Query: 78 WIEAHKQCLRAEGFNV 94
          WIEAHKQCLRAEGFNV
Sbjct: 61 WIEAHKQCLRAEGFNV 74
[Close]
BLAST of Spo16383.1 vs. UniProtKB/TrEMBL
Match: T1RUX2_SILVU (Cytochrome c oxidase copper chaperone OS=Silene vulgaris GN=Cox17 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.300e-22
Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 1 

		  

Query: 18 MGGVTS----SSIGVPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGED 77
          MGG+++    S +G    ++N +++TKT E +QKPKKKICCACP+TKKLRDECIVQ+GED
Sbjct: 1  MGGLSTLTNTSIVGSKPAEQNQESVTKTAESNQKPKKKICCACPDTKKLRDECIVQHGED 60

Query: 78 ACGKWIEAHKQCLRAEGFNV 94
          AC K IEAHKQCLRAEGFNV
Sbjct: 61 ACSKRIEAHKQCLRAEGFNV 80
[Close]
BLAST of Spo16383.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PI28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G322700 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.200e-21
Identity = 51/79 (64.56%), Postives = 63/79 (79.75%), Query Frame = 1 

		  

Query: 18 MGGV---TSSSIGVPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGEDA 77
          MGG+    +S++ +P  Q+N ++   TT  + KPKKKICCACPETKKLRDECIVQ+GE+A
Sbjct: 1  MGGLPTQNTSTLALPGLQQNQESAKPTTGAESKPKKKICCACPETKKLRDECIVQHGEEA 60

Query: 78 CGKWIEAHKQCLRAEGFNV 94
          C KWIEAH+ CLRAEGFNV
Sbjct: 61 CAKWIEAHRICLRAEGFNV 79
[Close]
BLAST of Spo16383.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PK07_GOSAR (Cytochrome c oxidase copper chaperone OS=Gossypium arboreum GN=F383_05603 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.200e-21
Identity = 51/79 (64.56%), Postives = 63/79 (79.75%), Query Frame = 1 

		  

Query: 18 MGGV---TSSSIGVPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGEDA 77
          MGG+    +S++ +P  Q+N ++   TT  + KPKKKICCACPETKKLRDECIVQ+GE+A
Sbjct: 1  MGGLPTQNTSTLALPGLQQNQESAKPTTGAESKPKKKICCACPETKKLRDECIVQHGEEA 60

Query: 78 CGKWIEAHKQCLRAEGFNV 94
          C KWIEAH+ CLRAEGFNV
Sbjct: 61 CAKWIEAHRICLRAEGFNV 79
[Close]
BLAST of Spo16383.1 vs. ExPASy Swiss-Prot
Match: CX171_ARATH (Cytochrome c oxidase copper chaperone 1 OS=Arabidopsis thaliana GN=COX17-1 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.600e-18
Identity = 43/66 (65.15%), Postives = 49/66 (74.24%), Query Frame = 1 

		  

Query: 28 VPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGEDACGKWIEAHKQCLR 87
          +P     P     + E   KPKK+ICCACP+TKKLRDECIV++GE AC KWIEAHK CLR
Sbjct: 11 IPPPTSEPSKAAASAET--KPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHKICLR 70

Query: 88 AEGFNV 94
          AEGFNV
Sbjct: 71 AEGFNV 74
[Close]
BLAST of Spo16383.1 vs. ExPASy Swiss-Prot
Match: CX172_ARATH (Cytochrome c oxidase copper chaperone 2 OS=Arabidopsis thaliana GN=COX17-2 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.800e-17
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 1 

		  

Query: 45 DQKPKKKICCACPETKKLRDECIVQNGEDACGKWIEAHKQCLRAEGFNV 94
          + KPKK+ICCACP+TKKLRDECIV++GE AC KWIEAH  CLR+EGF V
Sbjct: 24 ETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHILCLRSEGFKV 72
[Close]
BLAST of Spo16383.1 vs. ExPASy Swiss-Prot
Match: COX17_DICDI (Cytochrome c oxidase copper chaperone OS=Dictyostelium discoideum GN=cox17 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.800e-15
Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 1 

		  

Query: 39 TKTTEQDQKPKKKICCACPETKKLRDECIVQNGEDACGKWIEAHKQCLRAEGFNV 94
          T TT +   PKKK+CCACPETKK+RDECIV NGE+ C   IE HK CLR EGF+V
Sbjct: 6  TNTTTEVAAPKKKMCCACPETKKVRDECIVANGEEKCAALIELHKVCLRKEGFDV 60
[Close]
BLAST of Spo16383.1 vs. ExPASy Swiss-Prot
Match: COX17_HUMAN (Cytochrome c oxidase copper chaperone OS=Homo sapiens GN=COX17 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 3.800e-12
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 1 

		  

Query: 44 QDQKPKKKICCACPETKKLRDECIVQNGEDACGKWIEAHKQCLRAEGFNV 94
          Q++KP K  CCACPETKK RD CI++ GE+ CG  IEAHK+C+RA GF +
Sbjct: 15 QEKKPLKP-CCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63
[Close]
BLAST of Spo16383.1 vs. ExPASy Swiss-Prot
Match: COX17_PIG (Cytochrome c oxidase copper chaperone OS=Sus scrofa GN=COX17 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.800e-12
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 1 

		  

Query: 44 QDQKPKKKICCACPETKKLRDECIVQNGEDACGKWIEAHKQCLRAEGFNV 94
          Q++KP K  CCACPETKK RD CI++ GE+ CG  IEAHK+C+RA GF +
Sbjct: 14 QEKKPLKP-CCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 62
[Close]
BLAST of Spo16383.1 vs. TAIR (Arabidopsis)
Match: AT3G15352.1 (cytochrome c oxidase 17)

HSP 1 Score: 93.2 bits (230), Expect = 9.100e-20
Identity = 43/66 (65.15%), Postives = 49/66 (74.24%), Query Frame = 1 

		  

Query: 28 VPAEQKNPKTITKTTEQDQKPKKKICCACPETKKLRDECIVQNGEDACGKWIEAHKQCLR 87
          +P     P     + E   KPKK+ICCACP+TKKLRDECIV++GE AC KWIEAHK CLR
Sbjct: 11 IPPPTSEPSKAAASAET--KPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHKICLR 70

Query: 88 AEGFNV 94
          AEGFNV
Sbjct: 71 AEGFNV 74
[Close]
BLAST of Spo16383.1 vs. TAIR (Arabidopsis)
Match: AT1G53030.1 (Cytochrome C oxidase copper chaperone (COX17))

HSP 1 Score: 87.8 bits (216), Expect = 3.800e-18
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 1 

		  

Query: 45 DQKPKKKICCACPETKKLRDECIVQNGEDACGKWIEAHKQCLRAEGFNV 94
          + KPKK+ICCACP+TKKLRDECIV++GE AC KWIEAH  CLR+EGF V
Sbjct: 24 ETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHILCLRSEGFKV 72
The following BLAST results are available for this feature:
BLAST of Spo16383.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902169814|gb|KNA07714.1|1.3e-3181.1hypothetical protein SOVF_1693... [more]
gi|731366294|ref|XP_010694991.1|3.0e-2575.0PREDICTED: cytochrome c oxidas... [more]
gi|515416734|gb|AGO67234.1|1.8e-2267.5cytochrome c oxidase copper ch... [more]
gi|764565439|ref|XP_011461813.1|3.1e-2266.2PREDICTED: cytochrome c oxidas... [more]
gi|823198134|ref|XP_012434504.1|4.5e-2164.5PREDICTED: cytochrome c oxidas... [more]
back to top
BLAST of Spo16383.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QKE6_SPIOL8.8e-3281.1Uncharacterized protein OS=Spi... [more]
A0A0J8BDG1_BETVU2.1e-2575.0Uncharacterized protein OS=Bet... [more]
T1RUX2_SILVU1.3e-2267.5Cytochrome c oxidase copper ch... [more]
A0A0D2PI28_GOSRA3.2e-2164.5Uncharacterized protein OS=Gos... [more]
A0A0B0PK07_GOSAR3.2e-2164.5Cytochrome c oxidase copper ch... [more]
back to top
BLAST of Spo16383.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CX171_ARATH1.6e-1865.1Cytochrome c oxidase copper ch... [more]
CX172_ARATH6.8e-1775.5Cytochrome c oxidase copper ch... [more]
COX17_DICDI2.8e-1567.2Cytochrome c oxidase copper ch... [more]
COX17_HUMAN3.8e-1262.0Cytochrome c oxidase copper ch... [more]
COX17_PIG3.8e-1262.0Cytochrome c oxidase copper ch... [more]
back to top
BLAST of Spo16383.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G15352.19.1e-2065.1cytochrome c oxidase 17[more]
AT1G53030.13.8e-1875.5Cytochrome C oxidase copper ch... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007745Cytochrome c oxidase copper chaperonePRODOMPD014904coord: 47..93
score: 1.0
IPR007745Cytochrome c oxidase copper chaperonePANTHERPTHR16719CYTOCHROME C OXIDASE COPPER CHAPERONEcoord: 20..93
score: 1.1
IPR007745Cytochrome c oxidase copper chaperonePFAMPF05051COX17coord: 49..93
score: 2.0
IPR009069Cysteine alpha-hairpin motif superfamilyGENE3D1.10.810.10coord: 57..87
score: 6.
IPR009069Cysteine alpha-hairpin motif superfamilyunknownSSF47072Cysteine alpha-hairpin motifcoord: 37..93
score: 3.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006825 copper ion transport
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0009845 seed germination
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0008152 metabolic process
biological_process GO:0006281 DNA repair
biological_process GO:0048364 root development
biological_process GO:0050826 response to freezing
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0040029 regulation of gene expression, epigenetic
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0009908 flower development
biological_process GO:0016458 gene silencing
biological_process GO:0048366 leaf development
biological_process GO:0010162 seed dormancy process
biological_process GO:0009909 regulation of flower development
biological_process GO:0050794 regulation of cellular process
biological_process GO:0045694 regulation of embryo sac egg cell differentiation
biological_process GO:0006396 RNA processing
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016571 histone methylation
biological_process GO:0000741 karyogamy
biological_process GO:0019915 lipid storage
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0009933 meristem structural organization
biological_process GO:0006312 mitotic recombination
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0009640 photomorphogenesis
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0000338 protein deneddylation
biological_process GO:0016579 protein deubiquitination
biological_process GO:0016567 protein ubiquitination
biological_process GO:0044238 primary metabolic process
cellular_component GO:0008076 voltage-gated potassium channel complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005758 mitochondrial intermembrane space
cellular_component GO:0005829 cytosol
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008081 phosphoric diester hydrolase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0016531 copper chaperone activity
molecular_function GO:0004000 adenosine deaminase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005249 voltage-gated potassium channel activity
RNA-Seq Expression