Spo16389 (gene)

Overview
NameSpo16389
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRNA-binding KH domain-containing protein
Locationchr2 : 42009070 .. 42019240 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATTACTTATATTACTAATACAAATTCCCAATTTTAATTTTGAATCACAATTTACCTTCACCTGCTTTCTCCTTTTGCTAGCAAATCTCAACAATGGCGCAACAAGGACAATACCCAACAATCCCGACCCTTCAACCTTACACTCAACACCACCACCAGTACATCCCTCCACCACATCCGCCGCTTCAACCTCCACACCCCCACCACCAACCCCTAAACATCCCTTACCCCCACCAATACCACCACCACCACCCTCATCAATACGCCGATTATGCCTCTGTTCCTCAGCTTCAACACATGCCTTTGCCCCCAATTCAATACCCCACTTACCCACCACCCCATTACTCCGACCGACTGTCCTCAAAGCGTCCCCGTGAGCCCGTTTCGGACTCGGCCGAGGTGCCGTCCACGAAACGGCAAGCTGTGGGGAATGATATTTTGTTTAGAGTTGTTGTTCCTTCTGGACAAATTGGGAAGGTGATTGGGAAAGGTGGTCATAGGGTTCAGAAGATTAGGGATGATACTAAGTCCACCATCAAGATAGCTGATCCTATTGCTGTGAGTTCTTTTTAGGGGTTTTTCTGTTATTTAATTGTTTTTTGTTGGAGTTACTGACTTATGTATTTTTCTCTTTGGGTATATGATGATATATAGGTTGAAAATTTAAGTTTTGGTAATTTGGGAATGATTGGATTTTCGGGTTTTTGAAATTAGGGGAGTTTGTTCTTCTGTGTTTAATTTATATGGGATTAAGATTGTGTTGGAGTTATTTGCCAAAAAAAAAGGAGATTGTGTTGAAGTTCTTGTTATGTCTAATAAGCATTAGATAGGGGAAGCTGTTGAAGTTACTAAGGGATGACCTGTATGTATAATTTGATTTGATGTTGTGTCTTGTTGAGCTATCACATAACTCAATATGGTGAAGGCTCGAGTTAGTCTTGAGTACAGGAATACATAATTGGTGCTGAACTAGTAAGATGAACATTGGATGAATTTTGGTTGCCAGTTTTATTTGTTTCAGATTTCTGTGTTGGTGGCTTGGTGCTGTTAGGAAGATGAGTTTATCATGTTAAATTGTCAGTAAGTGACTTCCTTTCGAGGACTGCAAGAAATTCTAGTAATTGGGGGTGGTGAAGGAGTGAAGGGCTGATTCTGAAAACATCGATGTTTACATTAATCAGCCTCAGTTTTTTGTTCAAGATTCCTGTGTCGTTAAACTGTGTTGTATATTGCTATATTGGTTGATGTTGAGATTATATGCCAGTATATAACTATATGTAGTGGTTGCTAGTTTGATGCTCCAGTTTAAGCATTTTTTGGCTTGCTTTTGGATATAGCTTGGAGAGAGGAAATAAAAGAGTTCTAATACCCAATAATATGTGAGAATGGCAGCTTGTTGACGTGCTATTATTTTTGTCTCAGCGATACGAGGAACGTGTTATAATTATTAGTTCTAGAGAGAATGAAGCTGGGGGTATCAGTGATGCGGAGAAGGCTTTGCTTCAGATAGCTTCTCTTATCCTTGCGGTAATTAATCCTGTTTTCCTTTCTAACGCTCTTTATTGAAAATAACTTTGTTGTGCAAGTTAGTCAGTATTATAACTTTTGGGGTTTTTATTTGGAGTGCTTGTATAAATGAAATCAACCTTCTATAGACTTTTGTGGTTATTATATTCTTTATGATAAGATTCCTAACGTGATTCATCTTTTGAAACGATTATTATGAGAATAGTGTATGAAAAATTGGTCTTCCAACTTGTGATTTGGTGTGTCTTAAACTTTTTGCTACTGCTTTTTCTGGTTTAATTTTGATATTCATCTTCTCTGGTTTTGTAAACAAAAAAAATCAGATAATGAAGAAATTGTTATGTAATTGTTGGTTGGATCTTGTGAAGCCTGCATTGTTTACAGTATTTGGAACTTGCTTTGCGGTCTTGTACTGTGTCCGGTATCCCATCCCCCATCCCCCATCCCCTAAATTTCTCTTAAACTGACATGCACACATTCACAAGAGAGGGGGAGGTATGAAAATAAATGACTAACAGTTAACAAAAACATAGCATATATGGTGCACTAGAATACCTGTTCCCTTCTTTAGTTTACAAGGAAGTATTAGTTGGTCATACGATGGAGTAAATATTTCTCGTTGTAACAATACCATGGCCTTGAGTATCAAACTGACCTTTTTCTAATCTGACAGGATGATGGAACTAGTGCACCTGCAGTAAGCATTGCTGCTGCAACTGATCCCTATGCTGCTTCTGGCATCAGTGGAGGACATGCAGTTGCAAATTCAGTAAAGCTGTTAATAGCTGGTTCACAAGCGGGTGGCTTGATAGGGGTTTCAGGTCAGAACATTGAAAAGCTTAGAAACTCTTCTGGTGCTACAATTGCAGTTCTTGCGCCTAACCAATTGCCTCTGTGTGCATCTGCTCACGAATCTGATCGCATGGTCCAGGTAAGATGGATGTCATATGTAAGCCTACCATTGCGTGGTTCTATCTTCACTATTAATACTTGGATACTTAGATGGATGTTCTTCCTTGTTCTGGTTTCTTTACAACTTACAAGCGTCTTCTTTTAATCCTGATGTGATATTTTTCTATGAATATAAGGACAAATTATCTGATCCTCTCTTTCTAAGGGGAAATAGGCTTAGAAAGGAATGGCACAGTTTGTAGATCCCGTAATTCTCTGTTTCAAACGTCTGCCAGTTACATGCACATTAGCTTTGTAATGCAATTCATTGCCGTTAGAACTTGTAACCATAGTCCAATAAAAACGTGTATCCTTATTGTGGGTCTATTTTGGATCTCAAATCCCCTGGCCTGTAGATGCAACATTCCCTTTTTTTTGTGGGAGGGGGGGTTGCGAGTGTGTATAATTTTTTACGACGGTTGTGTTTTAATTAGATGTATGCCATGCTATGATTCTATGACCACTTAGGGGGTGTTTGGTTCATCCGTCGGTTTAGAATGATTGATACCTACATACCCATACCTAAACCCGGGTGTTTGGTTCGTCAAACCAGATTTGAAACATAGTTTTCTAATATTTTTATTAAATAAAAAATCCGTCAGACCTTCTCTTCTTCTCCTCCCTCCTAGCTTCCTCCATGAAACATTGTTGCTTCTTCAAAACTCCAACAAAACGTTGTATCTCCAACAAAGACAATTGATGCTTCTTTTAATTACCATCAACACTCGCACTTTAACCTTTAATTGTTGATTTTGTTCTGTAATTTTCAGATCTGGAACTATAATGGTAAAAAACACCACTAGTTGTAGTATCTAAATTGATGATTCCTATAGCATGTAAATGAAGGCATGATACTTATGTATCAATGTATGTTCCTTTTTTTGTTCTAGACATGGTAACTGCCACGGTGATGATATGGGAATGATGTTCATCTTCCATTTTTTCCTTTTTTTTGGTTGATGGGGTTGAATCGGTTGATAGAGGTGCAAGAGGAAGCCAAAGAGCAATAGATAATTTTTTGGTTTTTAATTTATGTTTTTCTGCGTTATTTAAGTTTGATTCCAAATTCATGGTTTTGGCTCATACGAGTCACACCAACCGGCCACCCCCTCCTAAAGGTATGAGAACCCAACCTGAGGGTTTGAAGGGCGGGTCCCACAGATATAAGATTTAAAAAAAATATTGAACCTAACATCAAGAATGGGTTTGGTTAATTCCAAACCCATACCTGATTCCAGAAGCCGCTGAACCAAACACCTCCCTTATAGGGTCAAGTCAGATAGCTTGCACTACTGCCTTCAATAAAGAGGTAGCTTATGCTACTTTTATGAATTTGATATGTACTCAGTATTATTTAGTTTGTTCAGTTGTGTTTGGAGTTAGTCCAATGAAAATTGGAACATATGTTGACATCATGTATATCTTTCTCATTGATTTGTGACTAACCTAGTACAGAAGGATACAAGACAGTAGTTTAAATGATTTTCTGGTAACCATACGTGGGGATTTCCAGTGCTTTCAAGAAGTATGAACTTGGTGTCAACCCTTTCAATCCAACGAAGTTCCTCCCGCTCCCAGTCTCCCTCCCACCCTGTTGTCTTCCCTTCATTTCCCTGCCCCATCTTCCTTCCCTCCCCCCTCCCCCATCCCTCTTCCCTTCCCTCTCCCTTCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTCCTCCCTCCCACCTCCTGCCCTTCCCGCCCTTTCCTTCCCAATTATTAATGCAGTTCCCTTTAGCACACTTCCCTTCACCTGCCCTTTGGCCTTTTGTGTGGAACTGACAAATATGTAAACTAATGATTGGTAGGTTGGCACCAGGACAGAGGAATAAGGAAATACAGGTTATCTGGGAGGCTTTCCTTGATTGTTCTCATTTGCGTCAGTCTGGCATTGAGTATGGATCAGTTTTCTCTTATGTTTATTATCGCCTCTTTTTCTATTACCCCTATTGTGCCTCTAGTTTTTCTGTTTCGACAATGGACGGGGAAGCTAATGAGCAGACTTTGCTGTGTGGAGGCTCAAGAGCTCAGTAATTGGTCTATAGGTTGGGGAAATCTTGCTCCCTATTTGACCTCATTAATAGATTGTACAAGGAAAACATAAATTAGCTCTGAGCCTATCATTAAGTGTGTATTAAAGCACTAATAGTAACTAAGCTATGAGGTTATTTGCTCAATGTGTGAACACCAGAAAAGGTCTACAGTCACATTCACCTGCATAAAAATTACAAACATCCACTTGTAATGGCAGAGTTCCCCATCTTATGTGCAAATATTACAATAATCACCGTATATTAATTGGTTTTTAGGAGATCTAAACGTTAAGTCGTAAATAACCATATCTGACCAATTTTAGTTTTTGACTAGTGAAGGTATCTTGTTTCCAAATGATTTTTAGTAAAAATTATCTCTGTAATAGTAATTAGTGCAAGAAAAAAGTACCAAAGGAGAGACTACAGGGTGTCTAAATGACTCCTAGAGCAGAAACACTATATGCATTTATGCACATAATTAACCAAATCTGTCCTTTTTATGCTCTCTTTTTTATTGTTCGAAAAATCAGGATCATCTATGATATTACATAATACTCCCTCCGTCCCGGAATACTTGAAACGCTTTCCTTATCGGGCCGTCCCAGATTACTTGAAACGCTTCTAAAAATGGAAACTTTACATAATATTTTATTATTTTCTCACCTTACCTAAGGGCCCACCAACAACCTTACTACCCAAATAAACATTAAAAAGTTCATGACCCCCAACCACATCCCACTATCTATATTAAAAAAATACCCCACCACTAACTACCTTTCAATTAAATAAGAAGTCAATTATAATGAATTAAACTCCGTGCCGGTCAAACGGTTTCAAGTATTCCGGGACGGAGGGAGTAGTCTCAAGAGAGAAGAAAATGGTAATCTGGAATTGTTATGATATGTGATGTGAAGGTTCAAAGTATGCACTTGTGAATCAATTCTGGGACCAAAATGAGCATACTAACAATAGTCAAACCATTAAAGTAACTAAAATAGCCCAGGTTTGATTCCTGTACAATATATATCATCTTCGTCTATGTTGTTTTTTGTATGAGAATCTTTTATAATGACATGCTTCCACCATCTGGCATTGTGGGGTGGTTTGATCATATGGGTGGGAATCTTGGACACTCCATCGCATGCTTTGTGTTTGCTCCTTATTCTGAGAAGTGATCCTTGTCAATGGCGATATCAGATATCAGGTGAAGTCCCAGCTGTAATGAAAGCCGTAGAGGAGATTGGTGTTGAACTTAGGTAATTATACTTTCTGGACTCACTAGCTTGAGCTCCATTATCCGCCGCCTTCTCGGGTTCATATGTTGTCTTTTTATCAGGCAAAACCCACCCAAGCAAGTAATTTCAATCAGCCCAACATACAACCTGAGCATTGCACGAGCAGCACAGAATTATATGGACCCAAACGCTGGTAAATTTTCTTTTATAAGCTTTATTGTTTACAGCTGTTTTAGTCTGCTGTTATTTCTATTATTTTTCTTACAATAAAATCATTCTAAGGAGAATATATTTTGCAGCTGAATATGTGACATTGGATATGGTAATCTCGGAAACAATGGTGGGAGGCTTGATTGGCAGAGCTGGTTCCAACATTTCGAGGATTAGAACTGAATCTGGTGCAATGATTAAGGTCTGTCTTGGGAAGATCGATGTTGTGAATTCTACAATTTACTGTCTTATTTGTTACATTAGTCATGTTTTGGGGGTTAATGAATGATTTTCTGATTTTATCTACACCAAAATACTTCTGCAAATTCTATGTTAAGATGGGTATGTATAATAAGATGCTCAGCATCATTCCATATCCCTTGGATAAATCACACCCTGTAGATTGTAAAAGTTTACTCATATCTTAGTATACTTTGTTTCTACTTATTGTTTTATACAAGGAACAAAGTACTAGGCTAAAGAGTACCCAGCAAGCTTAAAGAAGAAATAGCTGATCCAATAAAAAGCATCATAGTCTATCCTTAGTCGTAGGTCTCAACTTGGATAGGCTAGCAAGAACCCCACCACAATCATGTGCGTCAAGCAACCAGTAAGCATAAAACATCTAGTACTGCCTTCAGATGTTCAACTCGGGATAAAAATTCCATTTTCTGCCCTTATTCTAAATCTGACAGGTTGTACATCTCTTGAAGATATCCAGCAAATATTTTTTCCTATAATTTGAATGTTTGACGCCTCTGTTGATCTTCCTTGATATCTTCCTATATTCCTCGCCAACCCTGAAGTTTAAGTGGCAGCAGCAGACACAATCCTAACCGAATCAGCTTGTGAATATTGCCCGGACATTTTGCTATTTACTACATTCTTTTTCCTATGGTAGAATATGCCTATGAAGACACTGGTGCTGGAGTGAGCCTGATTTCCCTAATATTGAAATTTCTATTTCATAGAGGCAAAGAAGATGCGCTGAGCAGATGCAAATAGGGGGTTAAAAGAGAAACAATATGGAAATATAGAGTGGAACAATTGAAGGGGAATTCTGAAATACTGTAGTCAATCTGTAATGGATTGCAAAACCATGAAGACACAACTTAACTTTCTGTACCATGTAGATACCATGTTAGGTGTGTGCTGCTTGCGTCTTGTTCTTTTTCCCGAGGGAAGTAGTATATTTTGTCACCTGCGGTTTATTTGGATAATTCAAATTCCTTTTTCTTAGTTGATACTCCTGAATCAGCCCACAATTCTACTTTTTTTTTTTAGTTTCATATTGTTTTTCACTATAGATTAGTAGCTTACTGTTGCAATGTGACTTTTAATACTAATGCAAATATGCACTAACAAACGATTATAAATCACTGTGCATAATTTTATAAGACACTTGTTAAGTAATGGAGGTAGTACCATCTCTAAGAAGTAAGAACTGAAATTTGTATTGGTCTTTCACATCTTACATGTCAATATGGAGATTCTACTCCATTAATTAATGTATCCGAGATGCCCATATTTTTAAGTCTTCATATGATTTCCACCATGTCATCTCACTATTCTCCTGGGGACTTGCAATGTGCGTATTTATTGACCTTTTGCTATGCATGATGCTTTCTGGTCCTTTTCCAGATCTGAAAGCTGATTAATACACATTGTTATCTAACATGATGCTCATTCTGTTTCAACTTTCAGGTATTTGGTGGAAAAGGGGAGAATAAACATAGGCAGATCCAACTTATTGGCTCAGCTCAGCAGGTAAGCCTTCATTTTGTTTACCTTCTGATCTGGGTGTCGGAAAGTGAATTGCAGATCTAATACTTGTATTCTTCTTTTAAACCAACTGAGGAAGTACCATATAAATATACACAATCTGTTTAGCAAGAATTTGGTGTTAGAGGCAAAAGTACATATATTTTATCTAGATGATGGTGAAGTTGGATTACCTGCACTGCACAGCTGCACTATGTTCCTCAAGGTTGTACTTCTGATAGAGTGACTTGCTTTTAATGTTTATGTCCCTCTACAGGTAGCCTTGGCAAAACAGAGAGTTGATGAATACATTTATACTCAACTGACGCAACAACCTGCTGCTGAGCAGTCAGTTTAAAGGTCCATCTTCCTTACTCTTCTATCATCTGCCGTCTACTTTATGCTTTAAGGTGTGATTACTTCTGTAGCGGTTATTACATGGCAATAGTAATTCATCAAGGTTTTCAATTATGTGTATCAGAAACAATTATTTTAATGTTATTCAAGTTAGATTGTTCTTTAGTACAATCTACTCCCTCCATCGGAGTTAAAAGTGACATATACTATTTTTTGTAATCTGGAAAATGTTTTTACCTCCTCTAAGATTGGTGGTTGGCCGATTAGATGTTCTAATAGGCGCTTACTCGAAATAAGTGATAGATAACACAATGATTATAAAGGCCTTTTTAAAATAATGTACTCCATATGTGCGTAGGGGTTGGGAGACTTGGGACAACTTTAGTGATAACTAATTCTGGATAAAGGGAGTAATTCACAACTCACAAGGGAAGAAGACGATTTTGCGCCTGCTTTAACCTGCCTTTTCCTGTTAAGACTTGATTCTCGACAATTGAGAGTCTTGAGACAATTTGGCATCATAACGTAGATGACCATTTTAAGAGAAAAAGAGGGTTCTTGACAGTTACTCCGTAAGACTTAAGTGTATCAATTCGTTTTGGCTAATCATTAATTTCAGCCAGTTTATGCTTATAGAAACCATAGATCCGCAGAGAATGTGTCATAGTTGATAAATTTTGATGGTAAGTATTGAACTGCATTTGAGCATTAGCATCCAAAAAAAACTGGGTTTGGCCCAAGCCAAAAAAGGACTGGTATCAAACCGGTCTTATATCTGTAGTATCTGCGGAACTTAAGTTTTTTTTTCCTTTTGACCAAAAAGATCCTGTTGGAATCTGCAAGAACTACCACGCCATCTGTCTTGTGTTCTAGGGCTTGTTAGATTGAAGCTGGTGACCATTTTAAAGTTTCAGAAGAAAAATCAGACTACTCCTGAAGTGTATCCGAACTTCTATTGGCGTGCATGCGAATATGCTACAACATTGAAAACTGACGGGAATGTAGGGGAAATACACAAGATTTTGTTGCATAAATTGATAAATAAAGTGTGCCTTTTTCTTGAACATAATTAAGGTAGAGATGTAGGCTATTAGTTTGCAATATAGGTAGTACAAAAGAGAGAAATCTCTTGAGAATCTCAGGTCTATGATTAGTTAGGCTATTGACCGTGTGCCGTCCCTAGCCACACTGGTTAGAATATGAATGCATTAAGAGGTTGGTTGCTTTGTGATATGATGCTTCTTTGTTACATGGACTCGGATTTTAAGAAGTTTGAAGATTTTGTTTTTATCTTAGATGAGTTGGGGTTGCTTTCAGAATAATTTAGAACCCTTGAATAGTTTGATTTCCTCTTCCCCTTTCTTCAGTGAAATGATTAATAAATCACAGAAAATTATGTCATACATTGTCTACTCTGAGGAATATGTTCTTTTTCGAAATTGATATATAACTTGTACAAACTGTTGGTTGGTATTGCTGTAATCTGGTTTCTGGTATCTGATAATTCCGGTGCATGACTATGCTGTTTTGTGCATGCACAACTGTAAGACAAACTGTTGTGTTGGTATTGCTGCAATCTGGTTTCTGGTATCTGATAATTCCGTTGCATGACTATGCTGTTTTGCGCATTGCAGCTCTCTTACCTCAAACTTTATCATTGAGAAACTTGGGTTTCCCGTCTTGCAGATTGCCACAGTGAAGATGAAGTTTGTCGCTTGCCATAGCTAATGCTTCTACCCACTTGCTTCTCGTGTGAAAGGTAACTTAGGAGTGTGTTTTTTTGGTATAAATATGAGCAGCAACCTCTATACTTTGAGGGGCAAGCAAAAAGGATCACATTCGACAGCCATGCTTTATCTTTGTTACTGGTTTTATTTTTTACTTTCTCCTGGTTTAAATTTTAATTAATAGGTTATGTTTCTACTTTATGAAAAACGATGTGGTATTTGCATAGTTGATGTATTGGATATTGACATTTAGACCTGGTGTATGTACTAGAGACGTGCTCGTTTGGATTACAGTAATAGATACTCCACAAACAAACTCTCAGTTCCGAC

mRNA sequence

ATTATTACTTATATTACTAATACAAATTCCCAATTTTAATTTTGAATCACAATTTACCTTCACCTGCTTTCTCCTTTTGCTAGCAAATCTCAACAATGGCGCAACAAGGACAATACCCAACAATCCCGACCCTTCAACCTTACACTCAACACCACCACCAGTACATCCCTCCACCACATCCGCCGCTTCAACCTCCACACCCCCACCACCAACCCCTAAACATCCCTTACCCCCACCAATACCACCACCACCACCCTCATCAATACGCCGATTATGCCTCTGTTCCTCAGCTTCAACACATGCCTTTGCCCCCAATTCAATACCCCACTTACCCACCACCCCATTACTCCGACCGACTGTCCTCAAAGCGTCCCCGTGAGCCCGTTTCGGACTCGGCCGAGGTGCCGTCCACGAAACGGCAAGCTGTGGGGAATGATATTTTGTTTAGAGTTGTTGTTCCTTCTGGACAAATTGGGAAGGTGATTGGGAAAGGTGGTCATAGGGTTCAGAAGATTAGGGATGATACTAAGTCCACCATCAAGATAGCTGATCCTATTGCTCGATACGAGGAACGTGTTATAATTATTAGTTCTAGAGAGAATGAAGCTGGGGGTATCAGTGATGCGGAGAAGGCTTTGCTTCAGATAGCTTCTCTTATCCTTGCGGATGATGGAACTAGTGCACCTGCAGTAAGCATTGCTGCTGCAACTGATCCCTATGCTGCTTCTGGCATCAGTGGAGGACATGCAGTTGCAAATTCAGTAAAGCTGTTAATAGCTGGTTCACAAGCGGGTGGCTTGATAGGGGTTTCAGGTCAGAACATTGAAAAGCTTAGAAACTCTTCTGGTGCTACAATTGCAGTTCTTGCGCCTAACCAATTGCCTCTGTGTGCATCTGCTCACGAATCTGATCGCATGGTCCAGATATCAGGTGAAGTCCCAGCTGTAATGAAAGCCGTAGAGGAGATTGGTGTTGAACTTAGGCAAAACCCACCCAAGCAAGTAATTTCAATCAGCCCAACATACAACCTGAGCATTGCACGAGCAGCACAGAATTATATGGACCCAAACGCTGCTGAATATGTGACATTGGATATGGTAATCTCGGAAACAATGGTGGGAGGCTTGATTGGCAGAGCTGGTTCCAACATTTCGAGGATTAGAACTGAATCTGGTGCAATGATTAAGGTATTTGGTGGAAAAGGGGAGAATAAACATAGGCAGATCCAACTTATTGGCTCAGCTCAGCAGGTAGCCTTGGCAAAACAGAGAGTTGATGAATACATTTATACTCAACTGACGCAACAACCTGCTGCTGAGCAGTCAGTTTAAAGATTGCCACAGTGAAGATGAAGTTTGTCGCTTGCCATAGCTAATGCTTCTACCCACTTGCTTCTCGTGTGAAAGGTAACTTAGGAGTGTGTTTTTTTGGTATAAATATGAGCAGCAACCTCTATACTTTGAGGGGCAAGCAAAAAGGATCACATTCGACAGCCATGCTTTATCTTTGTTACTGGTTTTATTTTTTACTTTCTCCTGGTTTAAATTTTAATTAATAGGTTATGTTTCTACTTTATGAAAAACGATGTGGTATTTGCATAGTTGATGTATTGGATATTGACATTTAGACCTGGTGTATGTACTAGAGACGTGCTCGTTTGGATTACAGTAATAGATACTCCACAAACAAACTCTCAGTTCCGAC

Coding sequence (CDS)

ATGGCGCAACAAGGACAATACCCAACAATCCCGACCCTTCAACCTTACACTCAACACCACCACCAGTACATCCCTCCACCACATCCGCCGCTTCAACCTCCACACCCCCACCACCAACCCCTAAACATCCCTTACCCCCACCAATACCACCACCACCACCCTCATCAATACGCCGATTATGCCTCTGTTCCTCAGCTTCAACACATGCCTTTGCCCCCAATTCAATACCCCACTTACCCACCACCCCATTACTCCGACCGACTGTCCTCAAAGCGTCCCCGTGAGCCCGTTTCGGACTCGGCCGAGGTGCCGTCCACGAAACGGCAAGCTGTGGGGAATGATATTTTGTTTAGAGTTGTTGTTCCTTCTGGACAAATTGGGAAGGTGATTGGGAAAGGTGGTCATAGGGTTCAGAAGATTAGGGATGATACTAAGTCCACCATCAAGATAGCTGATCCTATTGCTCGATACGAGGAACGTGTTATAATTATTAGTTCTAGAGAGAATGAAGCTGGGGGTATCAGTGATGCGGAGAAGGCTTTGCTTCAGATAGCTTCTCTTATCCTTGCGGATGATGGAACTAGTGCACCTGCAGTAAGCATTGCTGCTGCAACTGATCCCTATGCTGCTTCTGGCATCAGTGGAGGACATGCAGTTGCAAATTCAGTAAAGCTGTTAATAGCTGGTTCACAAGCGGGTGGCTTGATAGGGGTTTCAGGTCAGAACATTGAAAAGCTTAGAAACTCTTCTGGTGCTACAATTGCAGTTCTTGCGCCTAACCAATTGCCTCTGTGTGCATCTGCTCACGAATCTGATCGCATGGTCCAGATATCAGGTGAAGTCCCAGCTGTAATGAAAGCCGTAGAGGAGATTGGTGTTGAACTTAGGCAAAACCCACCCAAGCAAGTAATTTCAATCAGCCCAACATACAACCTGAGCATTGCACGAGCAGCACAGAATTATATGGACCCAAACGCTGCTGAATATGTGACATTGGATATGGTAATCTCGGAAACAATGGTGGGAGGCTTGATTGGCAGAGCTGGTTCCAACATTTCGAGGATTAGAACTGAATCTGGTGCAATGATTAAGGTATTTGGTGGAAAAGGGGAGAATAAACATAGGCAGATCCAACTTATTGGCTCAGCTCAGCAGGTAGCCTTGGCAAAACAGAGAGTTGATGAATACATTTATACTCAACTGACGCAACAACCTGCTGCTGAGCAGTCAGTTTAA

Protein sequence

MAQQGQYPTIPTLQPYTQHHHQYIPPPHPPLQPPHPHHQPLNIPYPHQYHHHHPHQYADYASVPQLQHMPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKRQAVGNDILFRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQNPPKQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIRTESGAMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQSV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16389.1Spo16389.1mRNA


Homology
[Close]
BLAST of Spo16389.1 vs. NCBI nr
Match: gi|902226696|gb|KNA20449.1| (hypothetical protein SOVF_052260 [Spinacia oleracea])

HSP 1 Score: 780.4 bits (2014), Expect = 1.500e-222
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 1 

		  

Query: 1   MAQQGQYPTIPTLQPYTQHHHQYIPPPHPPLQPPHPHHQPLNIPYPHQYHHHHPHQYADY 60
           MAQQGQYPTIPTLQPYTQHHHQYIPPPHPPLQPPHPHHQPLNIPYPHQYHHHHPHQYADY
Sbjct: 1   MAQQGQYPTIPTLQPYTQHHHQYIPPPHPPLQPPHPHHQPLNIPYPHQYHHHHPHQYADY 60

Query: 61  ASVPQLQHMPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKRQAVGNDILFRVV 120
           ASVPQLQHMPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKRQAVGNDILFRVV
Sbjct: 61  ASVPQLQHMPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKRQAVGNDILFRVV 120

Query: 121 VPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKA 180
           VPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKA
Sbjct: 121 VPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKA 180

Query: 181 LLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSG 240
           LLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSG
Sbjct: 181 LLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSG 240

Query: 241 QNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQNPP 300
           QNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQNPP
Sbjct: 241 QNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQNPP 300

Query: 301 KQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIRTESG 360
           KQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIRTESG
Sbjct: 301 KQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIRTESG 360

Query: 361 AMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQSV 412
           AMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQSV
Sbjct: 361 AMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQSV 411
[Close]
BLAST of Spo16389.1 vs. NCBI nr
Match: gi|731360935|ref|XP_010692086.1| (PREDICTED: poly(rC)-binding protein 4-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 632.5 bits (1630), Expect = 5.200e-178
Identity = 355/416 (85.34%), Postives = 378/416 (90.87%), Query Frame = 1 

		  

Query: 1   MAQQGQYPTIPTLQPYTQHHHQYIPPPHPP--LQPPHPH-HQ--PLNIPYPHQ-YHHHHP 60
           MAQQGQYPTI   QPY QH HQYIPPPHPP  LQPPH H HQ  PLNIPY HQ  + +H 
Sbjct: 1   MAQQGQYPTI---QPYAQHQHQYIPPPHPPPPLQPPHQHQHQQHPLNIPYTHQNQYQYHY 60

Query: 61  HQYADYASVPQLQH-MPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKRQAVGN 120
            Q+  +    Q Q+ +PL  +QYP+YP PHYSDR SSKRPREPVSDSAEVPSTKRQA+G 
Sbjct: 61  QQHQQHQQQQQHQYSIPLGQLQYPSYPQPHYSDRPSSKRPREPVSDSAEVPSTKRQALGT 120

Query: 121 DILFRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGG 180
           DILFRVVVPSGQIGKVIGK GHRVQKIR+DTK+T+KIADPIARYEERVIIISS+EN+AGG
Sbjct: 121 DILFRVVVPSGQIGKVIGKAGHRVQKIREDTKATVKIADPIARYEERVIIISSKENDAGG 180

Query: 181 ISDAEKALLQIASLILADDGTSAPAVSIAAATDPY-AASGISGGHAVANSVKLLIAGSQA 240
           ISDAEKALLQIASLILADDG+SA A+SIAAATDPY AA+G+S GH VANSVKLLIAGSQA
Sbjct: 181 ISDAEKALLQIASLILADDGSSAAALSIAAATDPYGAAAGLSAGHVVANSVKLLIAGSQA 240

Query: 241 GGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIG 300
           GGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDR+VQISGEV AVMKAVEEIG
Sbjct: 241 GGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRLVQISGEVSAVMKAVEEIG 300

Query: 301 VELRQNPPKQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNI 360
           VELRQNPPKQVISISPTYNLS+ARA Q+YMDPNAAEYVTLDMVISETMVGGLIGRAGSNI
Sbjct: 301 VELRQNPPKQVISISPTYNLSVARAPQHYMDPNAAEYVTLDMVISETMVGGLIGRAGSNI 360

Query: 361 SRIRTESGAMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAE 409
           SRIRTESGAMIKVFGGKGE KHRQIQLIG+AQQVALAKQRVDEYIY+QLTQQPAAE
Sbjct: 361 SRIRTESGAMIKVFGGKGEQKHRQIQLIGTAQQVALAKQRVDEYIYSQLTQQPAAE 413
[Close]
BLAST of Spo16389.1 vs. NCBI nr
Match: gi|947051445|gb|KRH00974.1| (hypothetical protein GLYMA_18G245600 [Glycine max])

HSP 1 Score: 406.0 bits (1042), Expect = 7.900e-110
Identity = 229/354 (64.69%), Postives = 275/354 (77.68%), Query Frame = 1 

		  

Query: 61  ASVPQLQHMPLP-PIQYPTYPPPHYSDRLSSKRPRE---PVSDSAEVPSTKRQAVGNDIL 120
           A++P   HMPLP P+Q P           S KR R+   P + +A   S  ++A G D++
Sbjct: 20  ATMPMPMHMPLPMPLQIPFSAQDTAPS--SGKRRRDDEAPGTAAAPDQSAAKRAKGQDVI 79

Query: 121 FRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISD 180
           FR+VVPS  IGKVIGK GHR+QKIR+DTK+TIKIAD IAR+EERVIIISS++N+   ++D
Sbjct: 80  FRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEK-VTD 139

Query: 181 AEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLI 240
           AEKAL QIA LIL +D +S  A            S ++ GH  AN+++LLIAGSQAGGLI
Sbjct: 140 AEKALEQIAHLILKEDDSSLDA------------SKVTAGHVAANTIRLLIAGSQAGGLI 199

Query: 241 GVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELR 300
           G SGQNIEKLR+SSGA+I VLAPNQLPLCASAHESDR+VQ+SG+VPAVMKA+EEIG +LR
Sbjct: 200 GTSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLR 259

Query: 301 QNPPKQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIR 360
           +NPP+QVISISPTYN +  R +Q Y+DP + +YVT +M+ISETMVGGLIGR GSNISRIR
Sbjct: 260 ENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIR 319

Query: 361 TESGAMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQS 411
            ESGAMIKV+GGKGE KHRQIQ  GSAQQVALAKQRVDEYIY+QL QQ   +QS
Sbjct: 320 NESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQS 358
[Close]
BLAST of Spo16389.1 vs. NCBI nr
Match: gi|571548789|ref|XP_003552465.2| (PREDICTED: poly(rC)-binding protein 4-like isoform X1 [Glycine max])

HSP 1 Score: 406.0 bits (1042), Expect = 7.900e-110
Identity = 229/354 (64.69%), Postives = 275/354 (77.68%), Query Frame = 1 

		  

Query: 61  ASVPQLQHMPLP-PIQYPTYPPPHYSDRLSSKRPRE---PVSDSAEVPSTKRQAVGNDIL 120
           A++P   HMPLP P+Q P           S KR R+   P + +A   S  ++A G D++
Sbjct: 20  ATMPMPMHMPLPMPLQIPFSAQDTAPS--SGKRRRDDEAPGTAAAPDQSAAKRAKGQDVI 79

Query: 121 FRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISD 180
           FR+VVPS  IGKVIGK GHR+QKIR+DTK+TIKIAD IAR+EERVIIISS++N+   ++D
Sbjct: 80  FRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEK-VTD 139

Query: 181 AEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLI 240
           AEKAL QIA LIL +D +S  A            S ++ GH  AN+++LLIAGSQAGGLI
Sbjct: 140 AEKALEQIAHLILKEDDSSLDA------------SKVTAGHVAANTIRLLIAGSQAGGLI 199

Query: 241 GVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELR 300
           G SGQNIEKLR+SSGA+I VLAPNQLPLCASAHESDR+VQ+SG+VPAVMKA+EEIG +LR
Sbjct: 200 GTSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLR 259

Query: 301 QNPPKQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIR 360
           +NPP+QVISISPTYN +  R +Q Y+DP + +YVT +M+ISETMVGGLIGR GSNISRIR
Sbjct: 260 ENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIR 319

Query: 361 TESGAMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQS 411
            ESGAMIKV+GGKGE KHRQIQ  GSAQQVALAKQRVDEYIY+QL QQ   +QS
Sbjct: 320 NESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQS 358
[Close]
BLAST of Spo16389.1 vs. NCBI nr
Match: gi|947091589|gb|KRH40254.1| (hypothetical protein GLYMA_09G247400 [Glycine max])

HSP 1 Score: 401.4 bits (1030), Expect = 1.900e-108
Identity = 244/415 (58.80%), Postives = 299/415 (72.05%), Query Frame = 1 

		  

Query: 1   MAQQGQYPTIPTLQPYTQHHHQYIPPP-HPPLQPPHPHHQPLNIPYPHQYHHHHPHQYAD 60
           M+QQGQ P  P + P        +P P H  +Q       P+++P P Q           
Sbjct: 1   MSQQGQIPINPMVPPQNPMATMQVPMPMHMQMQMQMQMPMPMHMPLPMQM---------- 60

Query: 61  YASVPQLQHMPLP-PIQYPTYPPPHYSDRLSSKRPREPVSDSAEVP--STKRQAVGNDIL 120
                Q+Q MPLP P+Q P +     +     +R  +  S +A  P  S  ++A G D++
Sbjct: 61  -----QMQ-MPLPMPLQIP-FSVQDTAPSSGKRRRDDENSGTASAPEQSAAKRAKGQDVI 120

Query: 121 FRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISD 180
           FR+VVPS QIGKVIGK GHR+QKIR+DTK+TIKIAD IAR+EERVIIISS++N+   ++D
Sbjct: 121 FRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEK-VTD 180

Query: 181 AEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLI 240
           AEKAL QIA LIL +D +S  A            S ++ GH  AN+++LLIAGSQAGGLI
Sbjct: 181 AEKALEQIAHLILKEDDSSLDA------------SKVTAGHVAANTIRLLIAGSQAGGLI 240

Query: 241 GVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELR 300
           G+SGQNIEKLR+SSGA+I VLAPNQLPLCASAHESDR+VQ+SG+VPAVMKA+EEIG +LR
Sbjct: 241 GMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLR 300

Query: 301 QNPPKQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIR 360
           +NPP+QVISISPTYN +  R +Q Y+DP + +YVT +M+ISETMVGGLIGR GSNISRIR
Sbjct: 301 ENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIR 360

Query: 361 TESGAMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQSV 412
            ESGAMIKV+GGKGE KHRQIQ  GSAQQVALAKQRVDEYIY+QL QQ   +QSV
Sbjct: 361 NESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQSV 385
[Close]
BLAST of Spo16389.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNG2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_052260 PE=4 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 1.100e-222
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 1 

		  

Query: 1   MAQQGQYPTIPTLQPYTQHHHQYIPPPHPPLQPPHPHHQPLNIPYPHQYHHHHPHQYADY 60
           MAQQGQYPTIPTLQPYTQHHHQYIPPPHPPLQPPHPHHQPLNIPYPHQYHHHHPHQYADY
Sbjct: 1   MAQQGQYPTIPTLQPYTQHHHQYIPPPHPPLQPPHPHHQPLNIPYPHQYHHHHPHQYADY 60

Query: 61  ASVPQLQHMPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKRQAVGNDILFRVV 120
           ASVPQLQHMPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKRQAVGNDILFRVV
Sbjct: 61  ASVPQLQHMPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKRQAVGNDILFRVV 120

Query: 121 VPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKA 180
           VPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKA
Sbjct: 121 VPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKA 180

Query: 181 LLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSG 240
           LLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSG
Sbjct: 181 LLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSG 240

Query: 241 QNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQNPP 300
           QNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQNPP
Sbjct: 241 QNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQNPP 300

Query: 301 KQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIRTESG 360
           KQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIRTESG
Sbjct: 301 KQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIRTESG 360

Query: 361 AMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQSV 412
           AMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQSV
Sbjct: 361 AMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQSV 411
[Close]
BLAST of Spo16389.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BG59_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018040 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 3.600e-178
Identity = 355/416 (85.34%), Postives = 378/416 (90.87%), Query Frame = 1 

		  

Query: 1   MAQQGQYPTIPTLQPYTQHHHQYIPPPHPP--LQPPHPH-HQ--PLNIPYPHQ-YHHHHP 60
           MAQQGQYPTI   QPY QH HQYIPPPHPP  LQPPH H HQ  PLNIPY HQ  + +H 
Sbjct: 1   MAQQGQYPTI---QPYAQHQHQYIPPPHPPPPLQPPHQHQHQQHPLNIPYTHQNQYQYHY 60

Query: 61  HQYADYASVPQLQH-MPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKRQAVGN 120
            Q+  +    Q Q+ +PL  +QYP+YP PHYSDR SSKRPREPVSDSAEVPSTKRQA+G 
Sbjct: 61  QQHQQHQQQQQHQYSIPLGQLQYPSYPQPHYSDRPSSKRPREPVSDSAEVPSTKRQALGT 120

Query: 121 DILFRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGG 180
           DILFRVVVPSGQIGKVIGK GHRVQKIR+DTK+T+KIADPIARYEERVIIISS+EN+AGG
Sbjct: 121 DILFRVVVPSGQIGKVIGKAGHRVQKIREDTKATVKIADPIARYEERVIIISSKENDAGG 180

Query: 181 ISDAEKALLQIASLILADDGTSAPAVSIAAATDPY-AASGISGGHAVANSVKLLIAGSQA 240
           ISDAEKALLQIASLILADDG+SA A+SIAAATDPY AA+G+S GH VANSVKLLIAGSQA
Sbjct: 181 ISDAEKALLQIASLILADDGSSAAALSIAAATDPYGAAAGLSAGHVVANSVKLLIAGSQA 240

Query: 241 GGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIG 300
           GGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDR+VQISGEV AVMKAVEEIG
Sbjct: 241 GGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRLVQISGEVSAVMKAVEEIG 300

Query: 301 VELRQNPPKQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNI 360
           VELRQNPPKQVISISPTYNLS+ARA Q+YMDPNAAEYVTLDMVISETMVGGLIGRAGSNI
Sbjct: 301 VELRQNPPKQVISISPTYNLSVARAPQHYMDPNAAEYVTLDMVISETMVGGLIGRAGSNI 360

Query: 361 SRIRTESGAMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAE 409
           SRIRTESGAMIKVFGGKGE KHRQIQLIG+AQQVALAKQRVDEYIY+QLTQQPAAE
Sbjct: 361 SRIRTESGAMIKVFGGKGEQKHRQIQLIGTAQQVALAKQRVDEYIYSQLTQQPAAE 413
[Close]
BLAST of Spo16389.1 vs. UniProtKB/TrEMBL
Match: I1N421_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G245600 PE=4 SV=2)

HSP 1 Score: 406.0 bits (1042), Expect = 5.500e-110
Identity = 229/354 (64.69%), Postives = 275/354 (77.68%), Query Frame = 1 

		  

Query: 61  ASVPQLQHMPLP-PIQYPTYPPPHYSDRLSSKRPRE---PVSDSAEVPSTKRQAVGNDIL 120
           A++P   HMPLP P+Q P           S KR R+   P + +A   S  ++A G D++
Sbjct: 20  ATMPMPMHMPLPMPLQIPFSAQDTAPS--SGKRRRDDEAPGTAAAPDQSAAKRAKGQDVI 79

Query: 121 FRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISD 180
           FR+VVPS  IGKVIGK GHR+QKIR+DTK+TIKIAD IAR+EERVIIISS++N+   ++D
Sbjct: 80  FRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEK-VTD 139

Query: 181 AEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLI 240
           AEKAL QIA LIL +D +S  A            S ++ GH  AN+++LLIAGSQAGGLI
Sbjct: 140 AEKALEQIAHLILKEDDSSLDA------------SKVTAGHVAANTIRLLIAGSQAGGLI 199

Query: 241 GVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELR 300
           G SGQNIEKLR+SSGA+I VLAPNQLPLCASAHESDR+VQ+SG+VPAVMKA+EEIG +LR
Sbjct: 200 GTSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLR 259

Query: 301 QNPPKQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIR 360
           +NPP+QVISISPTYN +  R +Q Y+DP + +YVT +M+ISETMVGGLIGR GSNISRIR
Sbjct: 260 ENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIR 319

Query: 361 TESGAMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQS 411
            ESGAMIKV+GGKGE KHRQIQ  GSAQQVALAKQRVDEYIY+QL QQ   +QS
Sbjct: 320 NESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQS 358
[Close]
BLAST of Spo16389.1 vs. UniProtKB/TrEMBL
Match: K7MUI8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G245600 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 5.500e-110
Identity = 229/354 (64.69%), Postives = 275/354 (77.68%), Query Frame = 1 

		  

Query: 61  ASVPQLQHMPLP-PIQYPTYPPPHYSDRLSSKRPRE---PVSDSAEVPSTKRQAVGNDIL 120
           A++P   HMPLP P+Q P           S KR R+   P + +A   S  ++A G D++
Sbjct: 20  ATMPMPMHMPLPMPLQIPFSAQDTAPS--SGKRRRDDEAPGTAAAPDQSAAKRAKGQDVI 79

Query: 121 FRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISD 180
           FR+VVPS  IGKVIGK GHR+QKIR+DTK+TIKIAD IAR+EERVIIISS++N+   ++D
Sbjct: 80  FRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEK-VTD 139

Query: 181 AEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLI 240
           AEKAL QIA LIL +D +S  A            S ++ GH  AN+++LLIAGSQAGGLI
Sbjct: 140 AEKALEQIAHLILKEDDSSLDA------------SKVTAGHVAANTIRLLIAGSQAGGLI 199

Query: 241 GVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELR 300
           G SGQNIEKLR+SSGA+I VLAPNQLPLCASAHESDR+VQ+SG+VPAVMKA+EEIG +LR
Sbjct: 200 GTSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLR 259

Query: 301 QNPPKQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIR 360
           +NPP+QVISISPTYN +  R +Q Y+DP + +YVT +M+ISETMVGGLIGR GSNISRIR
Sbjct: 260 ENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIR 319

Query: 361 TESGAMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQS 411
            ESGAMIKV+GGKGE KHRQIQ  GSAQQVALAKQRVDEYIY+QL QQ   +QS
Sbjct: 320 NESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQS 358
[Close]
BLAST of Spo16389.1 vs. UniProtKB/TrEMBL
Match: A0A0R0ID14_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G247400 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.400e-108
Identity = 244/415 (58.80%), Postives = 299/415 (72.05%), Query Frame = 1 

		  

Query: 1   MAQQGQYPTIPTLQPYTQHHHQYIPPP-HPPLQPPHPHHQPLNIPYPHQYHHHHPHQYAD 60
           M+QQGQ P  P + P        +P P H  +Q       P+++P P Q           
Sbjct: 1   MSQQGQIPINPMVPPQNPMATMQVPMPMHMQMQMQMQMPMPMHMPLPMQM---------- 60

Query: 61  YASVPQLQHMPLP-PIQYPTYPPPHYSDRLSSKRPREPVSDSAEVP--STKRQAVGNDIL 120
                Q+Q MPLP P+Q P +     +     +R  +  S +A  P  S  ++A G D++
Sbjct: 61  -----QMQ-MPLPMPLQIP-FSVQDTAPSSGKRRRDDENSGTASAPEQSAAKRAKGQDVI 120

Query: 121 FRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISD 180
           FR+VVPS QIGKVIGK GHR+QKIR+DTK+TIKIAD IAR+EERVIIISS++N+   ++D
Sbjct: 121 FRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEK-VTD 180

Query: 181 AEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLI 240
           AEKAL QIA LIL +D +S  A            S ++ GH  AN+++LLIAGSQAGGLI
Sbjct: 181 AEKALEQIAHLILKEDDSSLDA------------SKVTAGHVAANTIRLLIAGSQAGGLI 240

Query: 241 GVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELR 300
           G+SGQNIEKLR+SSGA+I VLAPNQLPLCASAHESDR+VQ+SG+VPAVMKA+EEIG +LR
Sbjct: 241 GMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLR 300

Query: 301 QNPPKQVISISPTYNLSIARAAQNYMDPNAAEYVTLDMVISETMVGGLIGRAGSNISRIR 360
           +NPP+QVISISPTYN +  R +Q Y+DP + +YVT +M+ISETMVGGLIGR GSNISRIR
Sbjct: 301 ENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIR 360

Query: 361 TESGAMIKVFGGKGENKHRQIQLIGSAQQVALAKQRVDEYIYTQLTQQPAAEQSV 412
            ESGAMIKV+GGKGE KHRQIQ  GSAQQVALAKQRVDEYIY+QL QQ   +QSV
Sbjct: 361 NESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQSV 385
[Close]
BLAST of Spo16389.1 vs. ExPASy Swiss-Prot
Match: PEP_ARATH (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.400e-13
Identity = 61/222 (27.48%), Postives = 116/222 (52.25%), Query Frame = 1 

		  

Query: 79  YPPPHYSDRLSSKRPREP-VSDSAEVPSTKRQAVGNDILFRVVVPSGQIGKVIGKGGHRV 138
           +P  +  D L++     P  +DSAE    +      D +FR++VP  ++G +IG+ G  +
Sbjct: 40  FPELNQPDSLAAAETTFPDTNDSAE---ERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFI 99

Query: 139 QKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKALLQIASLI--LADDGTS 198
           +K+ ++T++ IK+ D      +R+++IS +E     +S A  A+L++   +  L D+   
Sbjct: 100 KKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDD- 159

Query: 199 APAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSGQNIEKLRNSSGATIA 258
                            +    +V +SV+LL+A +QA  LIG  G  I+ +  +SGA++ 
Sbjct: 160 ---------------DDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVR 219

Query: 259 VLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQ 298
           +L+  + P  A+  + +R+V + GE   ++KA+E I   LR+
Sbjct: 220 ILSEEETPFYAA--QDERIVDLQGEALKILKALEAIVGHLRR 240
[Close]
BLAST of Spo16389.1 vs. ExPASy Swiss-Prot
Match: HEN4_ARATH (KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.000e-13
Identity = 58/196 (29.59%), Postives = 101/196 (51.53%), Query Frame = 1 

		  

Query: 104 PSTKRQAVGN-DILFRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVI 163
           P      VGN D++F+++  +   G VIG GG  V+ +  +T + I + + +   EER+I
Sbjct: 440 PPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLI 499

Query: 164 IISSRENEAGGISDAEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANS 223
            +++ EN     S A+KA++ I S +               AT+      +  G   + +
Sbjct: 500 AVTASENPECQSSPAQKAIMLIFSRLFE------------LATNKI----LDNGPRSSIT 559

Query: 224 VKLLIAGSQAGGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVP 283
            +L++  SQ G ++G  G  + ++R ++GA I +L   Q P C S  E+D++VQI+GE P
Sbjct: 560 ARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCIS--ENDQVVQITGEFP 617

Query: 284 AVMKAVEEIGVELRQN 299
            V +A+  I   LR +
Sbjct: 620 NVREAIFHITSRLRDS 617
[Close]
BLAST of Spo16389.1 vs. ExPASy Swiss-Prot
Match: FLK_ARATH (Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.000e-12
Identity = 67/244 (27.46%), Postives = 115/244 (47.13%), Query Frame = 1 

		  

Query: 55  HQYADYASVPQLQHMPLPPIQYPTYPPPHYSDRLSSKRPREPVSDSAEVPSTKR-QAVGN 114
           H  A Y +   +Q      +Q          + L S +  EP  D+      KR      
Sbjct: 126 HDQAQYQAQGDVQDHNGDEVQDKVEDEEGIPEHLESLQKSEPEEDATVGGEEKRWPGWPG 185

Query: 115 DILFRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGG 174
           + +FR++VP+ ++G +IG+ G  ++KI ++T++ IKI D      ER +++S +E     
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245

Query: 175 ISDAEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAG 234
           +  +   LL++   I+  DG    A   + A  P              S +LL+  SQAG
Sbjct: 246 LPPSMDGLLRVHMRIV--DGLDGEA---SQAPPPSKV-----------STRLLVPASQAG 305

Query: 235 GLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGV 294
            LIG  G  ++ ++ +S   + VL    LP+ A   + DR+V++ GE  +V +A+E I  
Sbjct: 306 SLIGKQGGTVKAIQEASACIVRVLGSEDLPVFAL--QDDRVVEVVGEPTSVHRALELIAS 351

Query: 295 ELRQ 298
            LR+
Sbjct: 366 HLRK 351
[Close]
BLAST of Spo16389.1 vs. ExPASy Swiss-Prot
Match: PCBP4_HUMAN (Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.700e-11
Identity = 80/323 (24.77%), Postives = 144/323 (44.58%), Query Frame = 1 

		  

Query: 115 ILFRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGI 174
           +  R+++   ++G +IGK G  V++IR+ + + I I++      ER+  I+       G 
Sbjct: 18  LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTIT-------GS 77

Query: 175 SDAEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGG 234
           + A    + + +  L +D  +APA     +  P              +++L+I  SQ G 
Sbjct: 78  TAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPV-------------TLRLVIPASQCGS 137

Query: 235 LIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVE 294
           LIG +G  I+++R ++GA + V A + LP     + ++R V +SG   A++  V +I   
Sbjct: 138 LIGKAGTKIKEIRETTGAQVQV-AGDLLP-----NSTERAVTVSGVPDAIILCVRQICAV 197

Query: 295 LRQNPPK-QVISISPTYNLSIARAAQN---------------------YMDPNAAEYVTL 354
           + ++PPK   I   P+ +L     + N                      +  +A  + T 
Sbjct: 198 ILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATP 257

Query: 355 DMV---------------ISETMVGGLIGRAGSNISRIRTESGAMIKVFGGKGENK-HRQ 400
            +V               +   ++G +IGR GS IS IR  SGA IK+ G + E    R 
Sbjct: 258 SVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERH 311
[Close]
BLAST of Spo16389.1 vs. ExPASy Swiss-Prot
Match: Y4837_ARATH (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.100e-10
Identity = 77/328 (23.48%), Postives = 143/328 (43.60%), Query Frame = 1 

		  

Query: 114 DILFRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARY--EERVIIISSRENEA 173
           +++F+V+ P   I +VIGKGG  +++IR+ + S I++ D   +   +E VII+++ E+  
Sbjct: 311 ELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPD 370

Query: 174 GGISDAEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQ 233
              S A +A+L +   I  +D  +                           ++LL++   
Sbjct: 371 DMKSMAVEAVLLLQEYINDEDAENV-------------------------KMQLLVSSKV 430

Query: 234 AGGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEI 293
            G +IG SG  I ++R  + A I          C S  + D +V++SGEV +V  A+ +I
Sbjct: 431 IGCVIGKSGSVINEIRKRTNANI----------CISKGKKDDLVEVSGEVSSVRDALIQI 490

Query: 294 GVELRQN------------PPKQVISIS------------PTYNLSIARAA--QNYMDPN 353
            + LR++            PP +  + S            P++  S+A  +    Y    
Sbjct: 491 VLRLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMASTSGFHGYGSFP 550

Query: 354 AAEYV----------------TLDMVISETMVGGLIGRAGSNISRIRTESGAMIKVFGGK 398
           A + V                 L+++I    +  ++G+ G N+  IR  SGAMI++   K
Sbjct: 551 AGDNVLGSTGPYSYGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASK 603
[Close]
BLAST of Spo16389.1 vs. TAIR (Arabidopsis)
Match: AT5G15270.2 (RNA-binding KH domain-containing protein)

HSP 1 Score: 102.4 bits (254), Expect = 6.600e-22
Identity = 76/232 (32.76%), Postives = 118/232 (50.86%), Query Frame = 1 

		  

Query: 87  RLSSKRPREPVSDSAEVPSTKRQAVGND----------ILFRVVVPSGQIGKVIGKGGHR 146
           R S ++   P SD  +   +KR+  G+D           +FR + P  +IG VIG+GG  
Sbjct: 12  RDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDI 71

Query: 147 VQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEK-------ALLQIASLIL 206
           V+++R+DT+S I+I + I   +ERVI I S  +E     D EK       AL +I   ++
Sbjct: 72  VKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVV 131

Query: 207 ADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSGQNIEKLRNS 266
           ADD  S  +        P     +        + KLL+   Q G ++G  GQ ++ +R+ 
Sbjct: 132 ADDARSEDS--------PEGEKQV--------TAKLLVPSDQIGCILGRGGQIVQNIRSE 191

Query: 267 SGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQNPPK 302
           +GA I ++    +PLCA    SD ++QISGEV  V KA+ +I   L +NP +
Sbjct: 192 TGAQIRIVKDRNMPLCAL--NSDELIQISGEVLIVKKALLQIASRLHENPSR 225
[Close]
BLAST of Spo16389.1 vs. TAIR (Arabidopsis)
Match: AT1G14170.3 (RNA-binding KH domain-containing protein)

HSP 1 Score: 90.9 bits (224), Expect = 2.000e-18
Identity = 78/274 (28.47%), Postives = 129/274 (47.08%), Query Frame = 1 

		  

Query: 114 DILFRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGG 173
           D ++R + P  + G +IGKGG   ++IR +TKS ++I + +   EERV+ + S   E   
Sbjct: 43  DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNH 102

Query: 174 ISD-------AEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANSVKLL 233
             D       A  AL ++  +++AD           A  D         G     +V++L
Sbjct: 103 FGDDGELVCPALDALFKVHDMVVAD-----------ADQDDGTDDDNDLGEKQTVTVRML 162

Query: 234 IAGSQAGGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMK 293
           +   Q G +IG  GQ I+ LRN + A I V+  + LP CA     D ++ I GE   V +
Sbjct: 163 VPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVRE 222

Query: 294 AVEEIGVELRQNPPK-QVISISPT-----------YNLSIARAAQNY---MDPNAAEYVT 353
           A+ ++   L  NP + Q + +S +            + ++  + +NY    D   A    
Sbjct: 223 ALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFC 282

Query: 354 LDMVISETMVGGLIGRAGSNISRIRTESGAMIKV 366
           +  +     VGG+IG+ G  I++IR E+GA I+V
Sbjct: 283 VCFICPAENVGGVIGKGGGFINQIRQETGATIRV 304
[Close]
BLAST of Spo16389.1 vs. TAIR (Arabidopsis)
Match: AT1G51580.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 83.6 bits (205), Expect = 3.200e-16
Identity = 65/226 (28.76%), Postives = 114/226 (50.44%), Query Frame = 1 

		  

Query: 73  PIQYPTYPPPHYSDRLSSKRPREPVSDSAE-VPSTKRQAVGNDILFRVVVPSGQIGKVIG 132
           P   P YPP ++S     +    P +   E V    R  V  ++ FR++ P+ ++G +IG
Sbjct: 233 PFPQPGYPPEYHSMEYHPQWDHPPPNPMPEDVGPFNRPVVEEEVAFRLLCPADKVGSLIG 292

Query: 133 KGGHRVQKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKALLQIASLILAD 192
           KGG  V+ +++++ ++IK++DP    EER+I+IS+REN     S A+  ++++ + I+ +
Sbjct: 293 KGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHNRIV-E 352

Query: 193 DGTSAPAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSGQNIEKLRNSSG 252
            G    A  +A                     +LL+     G L+G  G  I ++R ++G
Sbjct: 353 IGFEPSAAVVA---------------------RLLVHSPYIGRLLGKGGHLISEMRRATG 412

Query: 253 ATIAVLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQ 298
           A+I V A +Q     S H  D +VQ+ G +  V  A+ +I   LR+
Sbjct: 413 ASIRVFAKDQATKYESQH--DEIVQVIGNLKTVQDALFQILCRLRE 434
[Close]
BLAST of Spo16389.1 vs. TAIR (Arabidopsis)
Match: AT4G26000.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 79.0 bits (193), Expect = 7.800e-15
Identity = 61/222 (27.48%), Postives = 116/222 (52.25%), Query Frame = 1 

		  

Query: 79  YPPPHYSDRLSSKRPREP-VSDSAEVPSTKRQAVGNDILFRVVVPSGQIGKVIGKGGHRV 138
           +P  +  D L++     P  +DSAE    +      D +FR++VP  ++G +IG+ G  +
Sbjct: 40  FPELNQPDSLAAAETTFPDTNDSAE---ERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFI 99

Query: 139 QKIRDDTKSTIKIADPIARYEERVIIISSRENEAGGISDAEKALLQIASLI--LADDGTS 198
           +K+ ++T++ IK+ D      +R+++IS +E     +S A  A+L++   +  L D+   
Sbjct: 100 KKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDD- 159

Query: 199 APAVSIAAATDPYAASGISGGHAVANSVKLLIAGSQAGGLIGVSGQNIEKLRNSSGATIA 258
                            +    +V +SV+LL+A +QA  LIG  G  I+ +  +SGA++ 
Sbjct: 160 ---------------DDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVR 219

Query: 259 VLAPNQLPLCASAHESDRMVQISGEVPAVMKAVEEIGVELRQ 298
           +L+  + P  A+  + +R+V + GE   ++KA+E I   LR+
Sbjct: 220 ILSEEETPFYAA--QDERIVDLQGEALKILKALEAIVGHLRR 240
[Close]
BLAST of Spo16389.1 vs. TAIR (Arabidopsis)
Match: AT5G64390.3 (RNA-binding KH domain-containing protein)

HSP 1 Score: 77.4 bits (189), Expect = 2.300e-14
Identity = 58/196 (29.59%), Postives = 101/196 (51.53%), Query Frame = 1 

		  

Query: 104 PSTKRQAVGN-DILFRVVVPSGQIGKVIGKGGHRVQKIRDDTKSTIKIADPIARYEERVI 163
           P      VGN D++F+++  +   G VIG GG  V+ +  +T + I + + +   EER+I
Sbjct: 440 PPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLI 499

Query: 164 IISSRENEAGGISDAEKALLQIASLILADDGTSAPAVSIAAATDPYAASGISGGHAVANS 223
            +++ EN     S A+KA++ I S +               AT+      +  G   + +
Sbjct: 500 AVTASENPECQSSPAQKAIMLIFSRLFE------------LATNKI----LDNGPRSSIT 559

Query: 224 VKLLIAGSQAGGLIGVSGQNIEKLRNSSGATIAVLAPNQLPLCASAHESDRMVQISGEVP 283
            +L++  SQ G ++G  G  + ++R ++GA I +L   Q P C S  E+D++VQI+GE P
Sbjct: 560 ARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCIS--ENDQVVQITGEFP 617

Query: 284 AVMKAVEEIGVELRQN 299
            V +A+  I   LR +
Sbjct: 620 NVREAIFHITSRLRDS 617
The following BLAST results are available for this feature:
BLAST of Spo16389.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902226696|gb|KNA20449.1|1.5e-222100.hypothetical protein SOVF_0522... [more]
gi|731360935|ref|XP_010692086.1|5.2e-17885.3PREDICTED: poly(rC)-binding pr... [more]
gi|947051445|gb|KRH00974.1|7.9e-11064.6hypothetical protein GLYMA_18G... [more]
gi|571548789|ref|XP_003552465.2|7.9e-11064.6PREDICTED: poly(rC)-binding pr... [more]
gi|947091589|gb|KRH40254.1|1.9e-10858.8hypothetical protein GLYMA_09G... [more]
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BLAST of Spo16389.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RNG2_SPIOL1.1e-222100.Uncharacterized protein OS=Spi... [more]
A0A0J8BG59_BETVU3.6e-17885.3Uncharacterized protein OS=Bet... [more]
I1N421_SOYBN5.5e-11064.6Uncharacterized protein OS=Gly... [more]
K7MUI8_SOYBN5.5e-11064.6Uncharacterized protein OS=Gly... [more]
A0A0R0ID14_SOYBN1.4e-10858.8Uncharacterized protein OS=Gly... [more]
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BLAST of Spo16389.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PEP_ARATH1.4e-1327.4RNA-binding KH domain-containi... [more]
HEN4_ARATH4.0e-1329.5KH domain-containing protein H... [more]
FLK_ARATH2.0e-1227.4Flowering locus K homology dom... [more]
PCBP4_HUMAN1.7e-1124.7Poly(rC)-binding protein 4 OS=... [more]
Y4837_ARATH1.1e-1023.4KH domain-containing protein A... [more]
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BLAST of Spo16389.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G15270.26.6e-2232.7RNA-binding KH domain-containi... [more]
AT1G14170.32.0e-1828.4RNA-binding KH domain-containi... [more]
AT1G51580.13.2e-1628.7RNA-binding KH domain-containi... [more]
AT4G26000.17.8e-1527.4RNA-binding KH domain-containi... [more]
AT5G64390.32.3e-1429.5RNA-binding KH domain-containi... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 328..398
score: 8.8E-12coord: 219..296
score: 8.4E-4coord: 113..186
score: 3.
IPR004088K Homology domain, type 1GENE3D3.30.1370.10coord: 327..397
score: 2.3E-15coord: 113..169
score: 1.9E-13coord: 222..301
score: 4.1
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 223..291
score: 1.2E-9coord: 332..394
score: 1.0E-11coord: 118..169
score: 6.5
IPR004088K Homology domain, type 1PROFILEPS50084KH_TYPE_1coord: 329..393
score: 14.571coord: 114..181
score: 14.299coord: 220..291
score: 14
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 222..297
score: 1.61E-10coord: 109..170
score: 6.58E-12coord: 321..398
score: 7.89
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 69..411
score: 1.3E
NoneNo IPR availablePANTHERPTHR10288:SF159SUBFAMILY NOT NAMEDcoord: 69..411
score: 1.3E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0009909 regulation of flower development
biological_process GO:0006281 DNA repair
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0019915 lipid storage
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0050826 response to freezing
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0006396 RNA processing
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
biological_process GO:0048575 short-day photoperiodism, flowering
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0048825 cotyledon development
biological_process GO:0051301 cell division
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0030001 metal ion transport
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006338 chromatin remodeling
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009908 flower development
biological_process GO:0016571 histone methylation
biological_process GO:0009640 photomorphogenesis
biological_process GO:0043966 histone H3 acetylation
biological_process GO:0043687 post-translational protein modification
biological_process GO:0016579 protein deubiquitination
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009410 response to xenobiotic stimulus
biological_process GO:0010015 root morphogenesis
biological_process GO:0000338 protein deneddylation
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0016020 membrane
cellular_component GO:0031011 Ino80 complex
cellular_component GO:0005634 nucleus
cellular_component GO:0000786 nucleosome
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005829 cytosol
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005488 binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0005515 protein binding
molecular_function GO:0010484 H3 histone acetyltransferase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression