Spo16425 (gene) | SpinachBase

Overview


Name	Spo16425
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	F-box protein family-like protein
Location	chr3 : 60397219 .. 60401094 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCATTAGCTGGACCACAACATCAAGCACTATACTTTGTGTTAGCCTATCTTCCATTACAGCAACTCCTGTTAGTCAGCCAAGTTTGTAAGTCATTTAAAGATTCTATTAGGGATGATGTCTTAGTATGGCTAAATTTAGTGGTGGAAAATCCATTAAGTGTACGCCTTACTGATCAAATTTTGATGAATATTTCCTCTAAAGCTCATGGTAGGCTTCGAACTTTAGCTTTGCTAAATTGTGTTAAGATTACAGATGAGGGATTACTTAACGTTGTTAATTCAAACCCGCTTCTTACTAAGGTAATTTTTTATCTTCATTAATCATTGATCACAGTCGACAACCAAGACTATTTTTTCCTTATTGTTAATACTTTACTAATCCCTCGATTTTTATTTATAGTAATTATCTTATTTTTAATTTAATAAAATTTTGAAGATATATTTATCTTTGTAAAAATGAATCTAGGGAAATTTTTTTGGGTTAATAGTGGTCTTTCTTATTGATTGATTATAAGAAATGAGGCATTGATTTAGAGTAAACCCTGTTATAGTTGTTATGCCTCCAAATGAACCATTAACATAATGTTGGGTAGTAAAGGTGGAATTTTAAAAAAATATATAGTAGGTGGGATTTAATAAAAGAAAATCGGCTAAGGTTGGATTAGTATTACCAAATTTTCCTAAATTTTCAAGTCTTACATGAATTTGAGGGGTGAAAAGATAAATTTGATTGAACTTTAAGGAGTTTTAACAATAATCTATACTAATATATTAAAAGGCGTTGTGAAAAACGTCAATGTGGCACGTAGTACTATTCCCTTTATGCCTCATCATCCACTCACCAAGTGTTATGACATGTCATAGACAACAAAAAACTAATACAATGAGATTCGAACATAAAGACCTCATGTACAGATGATATGTTTCATTTCCACCTTCACCAACCACCAATTGTGGTTATCTCTTCATATAAATAATTTATAAATAAATGATAACATAAGTCTAAACACAACTAAATTTTTATATGACATTTTATTTTCTTTGGAATACTTTGAAAAATAATAATAAATAATAATAATTATTATTATTAAAGCATTAAAACATAAAAATATGTTGACATAAATGTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTTGGTGTTTAATAATTTGAAGCACTTAGTTCCACTAGCAAACAAATTATACAAATGGTAAAATGGTCTAATTGAAAAATTACTTGGCATGATAAATGACGTAGTGTGTTTGTGTAGTTGACGAACTTCATGGATATTTTCAATTTGTGAAATACATGTATTTTAGTCAAATATTGAGCTCAAGAAAAATCTAAAATTTTAACTATTGAATGTAGCAACCGGGGCATCGACCGGGCCACATACTAGTTTAATTATTAAATATCAATGGAATGCTAACATGGCATTAGAAGAAAGTCTTAAGTCAAAACCCCATTGACCTTGCTCTAATGTATACGAATATATTAAGATGCGTTTCTATGAATTTTACTATGGCATGTGGCGCTGTTCTTTTTCAATTCAACACATGTCATTTCATGTCATCCACATGTAATTCAAAATTAGAACTAGATAATGTAGTTAATAAAAGTGGGCTTCAAACCCAAGACCTCGTGATTTGTGCACTAATGAATTATTCACTTGGATTTATCATGTTACATGTTATAGTTTTCAAACAAAATTAGAAGTAAATTACAATAGAACAAAGAACAATTATTTTAATAAAAGAATGATTGTTATTTTTCTTTTGCAAAAGGCAACAAGTAATGAATCGGGGCATCACCCGAGCATAAAAACTAGTGTTATATTTATAAAATAGTTCTCAAAACTAGCTTTTGGTATTTATAAATAGTGTAACTTGCAATGTACTTAATATGAACAAGGCAACAAGTAATGAATCGGGGCATCTCAATTTATATTTTTTTTGCAAAAGGCAATAAGTAATTAATCGGGGCATCTCAATTCATTAATCATGTTTGATAACACATCTCGATTAAGAGATTTGGTATAAATTGTTATGTAAGCCATATGAATTTTAGAATTTTATCCTGATTGCAATTTCAAATGTGCATGTAAATTGTAATATATCTCCTATTGAACTTGACCTGATTATCTGTTTTAGCTCTATGTACCTGCTTGTACTGGCTTAACTCCTGAAGGAGTAATCAAGGCGGTAGAAACGTTATCTGGGAAATCAACCGCCTTTATTAGTGTAAAGATAAATGGCATTTACAACATCAACAAAGAACACCTTGTAATATTGCAGTCCTACCTCACTACTGATAACACTATAAAAAGCAAGCGTAGGTTCTACCACAAGTATCGGAGTTCCTCTCTTTGCAGCCTAGATAAGGATGTTCGAACGATTGATGTAGAGATATGCCCAAAATGCATAGAGGTCAAGTTAGTATTCCATTGTCCTAAGGAGACAGAATGCATTGGTTGTTTCCAGTGCATACCAAGGTGTGAGGTTTGTGGCAGATGTATTTCTGACCAAGATGAGGATGATCAAGGAGAAACTATATGCAATGACACTGTGTGTTTAGACTGCTGGCTTTGCCTTCCAAAATGTAATCACTGTAACAAGCCATTTTGTCCTCGACATGCTCCTCACAAACTTGATCCTCTTGATTCCCAAGGATTTTTATGTGAGGTTTGCCACACAAAATCACTCACAGAACAGTTGCTGGAATAATGCTTTGATAAATGCATAGATTTTCCTTGTCCTACATGCTCTTTAAGGATTACCAATTTTTTGTTTTGATAGGTAAGAAGAAATACATTATGAACTCCTCCGCAAGAGGGTCACTCATAATTAGTCATTCATTATAATTGATAATAAATTCGGGCTAATACTATAATCTACATACATATGAAAGTTAACAAAGATGTCCAACGTTTGCGATCCATTCTGCTGCTTGATTTGATTCTTTAAAAATGTGCTTGATCTCCTAGAAGTCCAAATGTTTACGAAGAGACGTAATATCGTTAATGATGGTGTGCAGTTTCCACAGTGTCTTCCTGTATTGTGCTAATATGTAACACTTCCATGTTCCTTTAATCGCGTTTATGAAGAGGAGGTTGCTGCCTTCAATATTAAAACTTTTGATTTTAGAGGCGGATAAATTCTTGGAGACCTTTATGAAGAGCAGTGAATTCAACCATGAAATCTTGTGTGGATCCGAGGTTATAAGCTAATGCCGAAAAACATTGTCCCATAACTGTTTCTGAATACCTCTTGTTGCTCCATACAACAAACAACAACACTACCTCCCTATTTTTTGGGGATTTATAGCATGCATGCTAATCAAGTCATGTTCAATGACTAAAGACGTTTGTGCGCAATTCACAATGTCTACCCGCCAAGACCGTAGCTTTGTTTATCTTCCTTGTCTTTTCCCGTCTCCGAATATCTGCATGTTTTTAAGAAGGCATCTTAGTGGTAAGAAATCAGGTGTCACTGCCATCTTCTATAAAGGAATCTCAACTACATTAGGCCTTGGCACGAATACGCCTATTTGGTGGTGTAAACAAGGCAATATCAGCAATCAAGGGCCGACAAGGGAAGAGCCAACTATCTATTCGCCTTTTAGAATAATTATAGTTGTAGTTCGTTTTGTAAGGTGTGTAATGGTCTATAAAGGCCGTACTTTAGTTTATAGTTTGTAAATTTTTTATTTATGCAAATTTATTCCATGTCAAAAAAAAAGAAAAAAAAAAAAGAATACCTCTTGTTGCTAAGGAAAATTTGCATAAGTCGTCAAAGTTGAGTTTGGAGGAGTTTGCAGGAGGGGGATGCCAATGAACAAG

mRNA sequence

ATGGAGGCATTAGCTGGACCACAACATCAAGCACTATACTTTGTGTTAGCCTATCTTCCATTACAGCAACTCCTGTTAGTCAGCCAAGTTTGTAAGTCATTTAAAGATTCTATTAGGGATGATGTCTTAGTATGGCTAAATTTAGTGGTGGAAAATCCATTAAGTGTACGCCTTACTGATCAAATTTTGATGAATATTTCCTCTAAAGCTCATGGTAGGCTTCGAACTTTAGCTTTGCTAAATTGTGTTAAGATTACAGATGAGGGATTACTTAACGTTGTTAATTCAAACCCGCTTCTTACTAAGCTCTATGTACCTGCTTGTACTGGCTTAACTCCTGAAGGAGTAATCAAGGCGGTAGAAACGTTATCTGGGAAATCAACCGCCTTTATTAGTGTAAAGATAAATGGCATTTACAACATCAACAAAGAACACCTTGTAATATTGCAGTCCTACCTCACTACTGATAACACTATAAAAAGCAAGCGTAGGTTCTACCACAAGTATCGGAGTTCCTCTCTTTGCAGCCTAGATAAGGATGTTCGAACGATTGATGTAGAGATATGCCCAAAATGCATAGAGGTCAAGTTAGTATTCCATTGTCCTAAGGAGACAGAATGCATTGGTTGTTTCCAGTGCATACCAAGGTGTGAGGTTTGTGGCAGATGTATTTCTGACCAAGATGAGGATGATCAAGGAGAAACTATATGCAATGACACTGTGTGTTTAGACTGCTGGCTTTGCCTTCCAAAATGTAATCACTGTAACAAGCCATTTTGTCCTCGACATGCTCCTCACAAACTTGATCCTCTTGATTCCCAAGGATTTTTATGTGAGGTTTGCCACACAAAATCACTCACAGAACAGTTGCTGGAATAATGCTTTGATAAATGCATAGATTTTCCTTGTCCTACATGCTCTTTAAGGATTACCAATTTTTTGTTTTGATAGGTAAGAAGAAATACATTATGAACTCCTCCGCAAGAGGGTCACTCATAATTAGTCATTCATTATAATTGATAATAAATTCGGGCTAATACTATAATCTACATACATATGAAAGTTAACAAAGATGTCCAACGTTTGCGATCCATTCTGCTGCTTGATTTGATTCTTTAAAAATGTGCTTGATCTCCTAGAAGTCCAAATGTTTACGAAGAGACGTAATATCGTTAATGATGGTGTGCAGTTTCCACAGTGTCTTCCTGTATTGTGCTAATATGTAACACTTCCATGTTCCTTTAATCGCGTTTATGAAGAGGAGGTTGCTGCCTTCAATATTAAAACTTTTGATTTTAGAGGCGGATAAATTCTTGGAGACCTTTATGAAGAGCAGTGAATTCAACCATGAAATCTTGTGTGGATCCGAGGTTATAAGCTAATGCCGAAAAACATTGTCCCATAACTGTTTCTGAATACCTCTTGTTGCTCCATACAACAAACAACAACACTACCTCCCTATTTTTTGGGGATTTATAGCATGCATGCTAATCAAGTCATGTTCAATGACTAAAGACGTTTGTGCGCAATTCACAATGTCTACCCGCCAAGACCGTAGCTTTGTTTATCTTCCTTGTCTTTTCCCGTCTCCGAATATCTGCATGTTTTTAAGAAGGCATCTTAGTGGTAAGAAATCAGGTGTCACTGCCATCTTCTATAAAGGAATCTCAACTACATTAGGCCTTGGCACGAATACGCCTATTTGGTGGTGTAAACAAGGCAATATCAGCAATCAAGGGCCGACAAGGGAAGAGCCAACTATCTATTCGCCTTTTAGAATAATTATAGTTGTAGTTCGTTTTGTAAGGTGTGTAATGGTCTATAAAGGCCGTACTTTAGTTTATAGTTTGTAAATTTTTTATTTATGCAAATTTATTCCATGTCAAAAAAAAAGAAAAAAAAAAAAGAATACCTCTTGTTGCTAAGGAAAATTTGCATAAGTCGTCAAAGTTGAGTTTGGAGGAGTTTGCAGGAGGGGGATGCCAATGAACAAG

Coding sequence (CDS)

ATGGAGGCATTAGCTGGACCACAACATCAAGCACTATACTTTGTGTTAGCCTATCTTCCATTACAGCAACTCCTGTTAGTCAGCCAAGTTTGTAAGTCATTTAAAGATTCTATTAGGGATGATGTCTTAGTATGGCTAAATTTAGTGGTGGAAAATCCATTAAGTGTACGCCTTACTGATCAAATTTTGATGAATATTTCCTCTAAAGCTCATGGTAGGCTTCGAACTTTAGCTTTGCTAAATTGTGTTAAGATTACAGATGAGGGATTACTTAACGTTGTTAATTCAAACCCGCTTCTTACTAAGCTCTATGTACCTGCTTGTACTGGCTTAACTCCTGAAGGAGTAATCAAGGCGGTAGAAACGTTATCTGGGAAATCAACCGCCTTTATTAGTGTAAAGATAAATGGCATTTACAACATCAACAAAGAACACCTTGTAATATTGCAGTCCTACCTCACTACTGATAACACTATAAAAAGCAAGCGTAGGTTCTACCACAAGTATCGGAGTTCCTCTCTTTGCAGCCTAGATAAGGATGTTCGAACGATTGATGTAGAGATATGCCCAAAATGCATAGAGGTCAAGTTAGTATTCCATTGTCCTAAGGAGACAGAATGCATTGGTTGTTTCCAGTGCATACCAAGGTGTGAGGTTTGTGGCAGATGTATTTCTGACCAAGATGAGGATGATCAAGGAGAAACTATATGCAATGACACTGTGTGTTTAGACTGCTGGCTTTGCCTTCCAAAATGTAATCACTGTAACAAGCCATTTTGTCCTCGACATGCTCCTCACAAACTTGATCCTCTTGATTCCCAAGGATTTTTATGTGAGGTTTGCCACACAAAATCACTCACAGAACAGTTGCTGGAATAA

Protein sequence

MEALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVETLSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKDVRTIDVEICPKCIEVKLVFHCPKETECIGCFQCIPRCEVCGRCISDQDEDDQGETICNDTVCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCEVCHTKSLTEQLLE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16425.1	Spo16425.1	mRNA

Homology

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BLAST of Spo16425.1 vs. NCBI nr
Match: gi|902198464|gb|KNA13676.1| (hypothetical protein SOVF_114470, partial [Spinacia oleracea])

HSP 1 Score: 573.5 bits (1477), Expect = 2.000e-160
Identity = 277/279 (99.28%), Postives = 278/279 (99.64%), Query Frame = 1

		  
Query: 1   MEALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTD 60
           MEALAGP HQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTD
Sbjct: 1   MEALAGPPHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTD 60

Query: 61  QILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAV 120
           QILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAV
Sbjct: 61  QILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAV 120

Query: 121 ETLSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKD 180
           ETL+GKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKD
Sbjct: 121 ETLAGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKD 180

Query: 181 VRTIDVEICPKCIEVKLVFHCPKETECIGCFQCIPRCEVCGRCISDQDEDDQGETICNDT 240
           VRTIDVEICPKCIEVKLVFHCPKETECIGCFQCIPRCEVCGRCISDQDEDDQGETICNDT
Sbjct: 181 VRTIDVEICPKCIEVKLVFHCPKETECIGCFQCIPRCEVCGRCISDQDEDDQGETICNDT 240

Query: 241 VCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCE 280
           VCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCE
Sbjct: 241 VCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCE 279

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BLAST of Spo16425.1 vs. NCBI nr
Match: gi|731341474|ref|XP_010681919.1| (PREDICTED: F-box protein SKIP28 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 423.7 bits (1088), Expect = 2.600e-115
Identity = 210/288 (72.92%), Postives = 237/288 (82.29%), Query Frame = 1

		  
Query: 1   MEALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTD 60
           MEA   P +QAL+FVLAYLPLQQLL+ SQVCKSF+D+I DDVL+WLNLVVE PLS+RLTD
Sbjct: 1   MEATGSP-NQALFFVLAYLPLQQLLVTSQVCKSFRDAISDDVLIWLNLVVERPLSLRLTD 60

Query: 61  QILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAV 120
           QIL+ ++SKA GRL TLALL+CVKITDEGLL VVN+NPLL KLYVP CTGLTPEG  + V
Sbjct: 61  QILIKLASKASGRLGTLALLDCVKITDEGLLRVVNANPLLNKLYVPGCTGLTPEGTGEVV 120

Query: 121 ETLSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKD 180
           +TL+  S+ F S+KINGIYNINKE  +ILQS +   +T K+K RFYH Y SSS  SLD+D
Sbjct: 121 KTLAATSSTFSSLKINGIYNINKEDFLILQSNIF--DTTKAKPRFYHMYSSSSFRSLDED 180

Query: 181 VRTIDVEICPKCIEVKLVFHCPKETECIGCFQCIPRCEVCGRCISDQDEDDQGETICNDT 240
            R IDVEICPKC EVKLVFHCPKE  C GCFQCIPRCEVCGRCIS QDED+ GETICND 
Sbjct: 181 ARAIDVEICPKCKEVKLVFHCPKENVCKGCFQCIPRCEVCGRCISKQDEDEFGETICNDI 240

Query: 241 VCLDCWLCLPKCNHCNKPFCPRHAPHK-LDPLDSQGFLCEVCHTKSLT 288
           VCL+CWLCLPKCNHCNKPFCPRHA  +  D L SQ F+C +C TKS T
Sbjct: 241 VCLNCWLCLPKCNHCNKPFCPRHAGEQGFDHLGSQEFICWICQTKSST 285

[Close]

BLAST of Spo16425.1 vs. NCBI nr
Match: gi|225424337|ref|XP_002284829.1| (PREDICTED: F-box protein SKIP28 [Vitis vinifera])

HSP 1 Score: 307.4 bits (786), Expect = 2.700e-80
Identity = 147/296 (49.66%), Postives = 208/296 (70.27%), Query Frame = 1

		  
Query: 2   EALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQ 61
           E   GP H+AL  VLAYLPL +LL +S+VC+S +D++  DVL WL+++VE PL++  +D+
Sbjct: 39  EVERGPPHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWLDIIVEKPLNMLFSDE 98

Query: 62  ILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVE 121
           I++ ++SKA+GRLRTLAL++C KITD+GL  V+  NPL+ +LY+PACTGLTPEG+++AV+
Sbjct: 99  IMIKLTSKANGRLRTLALMSCTKITDDGLQQVIEKNPLINRLYLPACTGLTPEGIMRAVK 158

Query: 122 TLSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRR-----FYHKYRSSSLCS 181
           TL+    A   V+ING+YN+ KEHL  L SYL   N  K + +     F+H +R+ S+  
Sbjct: 159 TLTEHYQALKCVRINGVYNMKKEHLETLSSYLQM-NPAKMEGQMQQLCFFHDHRNISVLR 218

Query: 182 LDKDVRTIDVEICPKCIEVKLVFHCPKET----------ECIGCFQCIPRCEVCGRCISD 241
           +++  R ID+EICP+C EV++VF CP+ET          EC GC+ CIPRCE CG+CI  
Sbjct: 219 VEESYRPIDLEICPRCNEVRMVFDCPRETCKKKRERAMAECRGCYFCIPRCEECGKCI-- 278

Query: 242 QDEDDQGETICNDTVCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCEVCH 283
            + ++ GE +C D +C DCWL LPKCN CN+P+C RHA  +     S GF+C +CH
Sbjct: 279 -EVEEPGEVVCADVLCSDCWLQLPKCNFCNRPYCSRHANLQHSTSGSTGFICCICH 330

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BLAST of Spo16425.1 vs. NCBI nr
Match: gi|823134883|ref|XP_012467235.1| (PREDICTED: F-box protein SKIP28-like [Gossypium raimondii])

HSP 1 Score: 307.4 bits (786), Expect = 2.700e-80
Identity = 152/298 (51.01%), Postives = 205/298 (68.79%), Query Frame = 1

		  
Query: 3   ALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQI 62
           + AGP H+AL+ VLAYLPL +LL +S+VC+S +D++  DVL WLN++VE PLS+RL+D+I
Sbjct: 18  SFAGPPHEALFLVLAYLPLFELLSMSEVCRSLRDAVEKDVLPWLNVIVERPLSLRLSDEI 77

Query: 63  LMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVET 122
           LM I+SKA+GRLRTL L+ C KITD+GL  V++ NPL++KL++P CTGLTP+GVI+A++ 
Sbjct: 78  LMKIASKANGRLRTLVLMYCAKITDDGLQRVIDQNPLISKLHIPGCTGLTPDGVIRALQK 137

Query: 123 LSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRR-----FYHKYRSSSLCSL 182
           LS       S+ INGI N+ KEHL  LQ YL T+  +   ++      YH YR       
Sbjct: 138 LSDCQDGLKSLWINGIANMKKEHLERLQFYLQTNQKLPQIQQTRQPLLYHNYRRLRAYRW 197

Query: 183 DKDVRTIDVEICPKCIEVKLVFHCPKE----------TECIGCFQCIPRCEVCGRCISDQ 242
           ++  R IDVE+CPKC EV++VF CP+E          T C  C  CIPRCE CG+C+ + 
Sbjct: 198 EELGRVIDVELCPKCNEVRVVFDCPREECKRKRENSMTGCRMCMFCIPRCEECGKCVENG 257

Query: 243 DEDDQGETICNDTVCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCEVCHTKS 286
           D +   ET+C DT+CLDCW+ LPKCN CNKP C +HA  ++    S G++C VCH KS
Sbjct: 258 DLE---ETVCADTLCLDCWIQLPKCNFCNKPCCTQHANMQIASTGSIGWICSVCHDKS 312

[Close]

BLAST of Spo16425.1 vs. NCBI nr
Match: gi|470122852|ref|XP_004297452.1| (PREDICTED: F-box protein SKIP28 [Fragaria vesca subsp. vesca])

HSP 1 Score: 305.8 bits (782), Expect = 7.900e-80
Identity = 152/299 (50.84%), Postives = 200/299 (66.89%), Query Frame = 1

		  
Query: 2   EALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQ 61
           E  AGP H+AL+ +L YLPL +LL ++QVC + +D++  DV+ WLN++VE PLS++L+D 
Sbjct: 32  EKEAGPPHEALFLILTYLPLFELLAMNQVCTTLRDAVNKDVISWLNIMVEKPLSLKLSDA 91

Query: 62  ILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVE 121
           ILM ++SKA+GRLR+LAL+ C KITD GL  VV  NPL++KLY+PACTGLTPEGVI+AV+
Sbjct: 92  ILMKLTSKANGRLRSLALMKCAKITDNGLQQVVEQNPLISKLYLPACTGLTPEGVIQAVK 151

Query: 122 TLSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRR------FYHKYRSSSLC 181
           TLS       S+ INGIYNINK+HL  L+SYL   N    K +       + +Y  S   
Sbjct: 152 TLSEHGHCLKSIMINGIYNINKQHLETLRSYLDEMNLDTKKEQPGSCPLLFLEYMDSPTL 211

Query: 182 SLDKDVRTIDVEICPKCIEVKLVFHCPK----------ETECIGCFQCIPRCEVCGRCIS 241
             DK   TID+E+CPKC EV++VF CP+           TEC GC  CI RC  CG C+ 
Sbjct: 212 RHDKGHTTIDLEVCPKCDEVRMVFDCPRWACKRMLERSVTECRGCKFCILRCLECGGCVD 271

Query: 242 DQDEDDQGETICNDTVCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCEVCHTK 285
            Q+ +   E +C D +C DCWL LPKCN CNKP+C +H+ +K     S GF+CEVC+ K
Sbjct: 272 SQEIE---EAVCGDILCSDCWLHLPKCNFCNKPYCKQHSDNKCSTSGSTGFVCEVCYAK 327

[Close]

BLAST of Spo16425.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2E1_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_114470 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.400e-160
Identity = 277/279 (99.28%), Postives = 278/279 (99.64%), Query Frame = 1

		  
Query: 1   MEALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTD 60
           MEALAGP HQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTD
Sbjct: 1   MEALAGPPHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTD 60

Query: 61  QILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAV 120
           QILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAV
Sbjct: 61  QILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAV 120

Query: 121 ETLSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKD 180
           ETL+GKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKD
Sbjct: 121 ETLAGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKD 180

Query: 181 VRTIDVEICPKCIEVKLVFHCPKETECIGCFQCIPRCEVCGRCISDQDEDDQGETICNDT 240
           VRTIDVEICPKCIEVKLVFHCPKETECIGCFQCIPRCEVCGRCISDQDEDDQGETICNDT
Sbjct: 181 VRTIDVEICPKCIEVKLVFHCPKETECIGCFQCIPRCEVCGRCISDQDEDDQGETICNDT 240

Query: 241 VCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCE 280
           VCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCE
Sbjct: 241 VCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCE 279

[Close]

BLAST of Spo16425.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2Q0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g144370 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.800e-115
Identity = 210/288 (72.92%), Postives = 237/288 (82.29%), Query Frame = 1

		  
Query: 1   MEALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTD 60
           MEA   P +QAL+FVLAYLPLQQLL+ SQVCKSF+D+I DDVL+WLNLVVE PLS+RLTD
Sbjct: 1   MEATGSP-NQALFFVLAYLPLQQLLVTSQVCKSFRDAISDDVLIWLNLVVERPLSLRLTD 60

Query: 61  QILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAV 120
           QIL+ ++SKA GRL TLALL+CVKITDEGLL VVN+NPLL KLYVP CTGLTPEG  + V
Sbjct: 61  QILIKLASKASGRLGTLALLDCVKITDEGLLRVVNANPLLNKLYVPGCTGLTPEGTGEVV 120

Query: 121 ETLSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKD 180
           +TL+  S+ F S+KINGIYNINKE  +ILQS +   +T K+K RFYH Y SSS  SLD+D
Sbjct: 121 KTLAATSSTFSSLKINGIYNINKEDFLILQSNIF--DTTKAKPRFYHMYSSSSFRSLDED 180

Query: 181 VRTIDVEICPKCIEVKLVFHCPKETECIGCFQCIPRCEVCGRCISDQDEDDQGETICNDT 240
            R IDVEICPKC EVKLVFHCPKE  C GCFQCIPRCEVCGRCIS QDED+ GETICND 
Sbjct: 181 ARAIDVEICPKCKEVKLVFHCPKENVCKGCFQCIPRCEVCGRCISKQDEDEFGETICNDI 240

Query: 241 VCLDCWLCLPKCNHCNKPFCPRHAPHK-LDPLDSQGFLCEVCHTKSLT 288
           VCL+CWLCLPKCNHCNKPFCPRHA  +  D L SQ F+C +C TKS T
Sbjct: 241 VCLNCWLCLPKCNHCNKPFCPRHAGEQGFDHLGSQEFICWICQTKSST 285

[Close]

BLAST of Spo16425.1 vs. UniProtKB/TrEMBL
Match: A0A0D2Q803_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G174200 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.900e-80
Identity = 152/298 (51.01%), Postives = 205/298 (68.79%), Query Frame = 1

		  
Query: 3   ALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQI 62
           + AGP H+AL+ VLAYLPL +LL +S+VC+S +D++  DVL WLN++VE PLS+RL+D+I
Sbjct: 18  SFAGPPHEALFLVLAYLPLFELLSMSEVCRSLRDAVEKDVLPWLNVIVERPLSLRLSDEI 77

Query: 63  LMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVET 122
           LM I+SKA+GRLRTL L+ C KITD+GL  V++ NPL++KL++P CTGLTP+GVI+A++ 
Sbjct: 78  LMKIASKANGRLRTLVLMYCAKITDDGLQRVIDQNPLISKLHIPGCTGLTPDGVIRALQK 137

Query: 123 LSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRR-----FYHKYRSSSLCSL 182
           LS       S+ INGI N+ KEHL  LQ YL T+  +   ++      YH YR       
Sbjct: 138 LSDCQDGLKSLWINGIANMKKEHLERLQFYLQTNQKLPQIQQTRQPLLYHNYRRLRAYRW 197

Query: 183 DKDVRTIDVEICPKCIEVKLVFHCPKE----------TECIGCFQCIPRCEVCGRCISDQ 242
           ++  R IDVE+CPKC EV++VF CP+E          T C  C  CIPRCE CG+C+ + 
Sbjct: 198 EELGRVIDVELCPKCNEVRVVFDCPREECKRKRENSMTGCRMCMFCIPRCEECGKCVENG 257

Query: 243 DEDDQGETICNDTVCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCEVCHTKS 286
           D +   ET+C DT+CLDCW+ LPKCN CNKP C +HA  ++    S G++C VCH KS
Sbjct: 258 DLE---ETVCADTLCLDCWIQLPKCNFCNKPCCTQHANMQIASTGSIGWICSVCHDKS 312

[Close]

BLAST of Spo16425.1 vs. UniProtKB/TrEMBL
Match: A0A061E7T8_THECC (RNI-like superfamily protein, putative OS=Theobroma cacao GN=TCM_011014 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.100e-77
Identity = 149/302 (49.34%), Postives = 203/302 (67.22%), Query Frame = 1

		  
Query: 2   EALAGPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQ 61
           EA AG  H+AL+ VLAYLPL +LL +S+VC S +D++  DVL WLN++VE PL++RL+D+
Sbjct: 23  EAEAGSPHEALFLVLAYLPLFELLAMSEVCMSLRDAVEKDVLPWLNIIVERPLNLRLSDE 82

Query: 62  ILMNISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVE 121
           ILM ++SKA+GRLRTLAL+NC  I+D+GL  V++ NPL+ +LYVP CTGLTP GVI+AV+
Sbjct: 83  ILMKVASKANGRLRTLALINCAWISDDGLQRVIDKNPLINELYVPGCTGLTPNGVIRAVQ 142

Query: 122 TLSGKSTAFISVKINGIYNINKEHLVILQSYLTTDNT---IKSKRR--FYHKYRSSSLCS 181
            LS    +   ++INGIYN+ KEHL  L  Y+ T+ T   ++ K+R   YH +R      
Sbjct: 143 KLSEHHHSLKRLQINGIYNMKKEHLETLHYYMLTNQTKQQVQKKQRPLLYHNFRKFQAYR 202

Query: 182 LDKDVRTIDVEICPKCIEVKLVFHCPKE-----------TECIGCFQCIPRCEVCGRCIS 241
            D+  R IDVEICP+C EV++VF CP+E            +C  C  CIPRCE CGRC+ 
Sbjct: 203 WDEFGRIIDVEICPRCSEVRMVFDCPREECRRTREQYSLIDCRMCKFCIPRCEECGRCVK 262

Query: 242 DQDEDDQGETICNDTVCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCEVCHTKS 288
            +D +     +C DT+C DCW+ L KCN CNKP C +HA  ++    S  ++C VCH + 
Sbjct: 263 PEDLE---VAVCTDTLCSDCWVQLSKCNFCNKPCCGQHADLQISSSGSTEWICGVCHDQF 321

[Close]

BLAST of Spo16425.1 vs. UniProtKB/TrEMBL
Match: A0A059D6P7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02951 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.400e-77
Identity = 147/286 (51.40%), Postives = 194/286 (67.83%), Query Frame = 1

		  
Query: 6   GPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQILMN 65
           G  H+AL  VL YL L  L+ V +VC S +D++RDDVL WL L+V++PLS R+ D+IL+ 
Sbjct: 25  GQPHEALLLVLPYLSLSGLIAVGEVCTSLRDALRDDVLPWLELIVDDPLSRRMCDEILIE 84

Query: 66  ISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVETLSG 125
           I+SKA+G+LRTL L NC+KITD GL  V+  NPL+ KLYVP CTGLTPEGVI AV+TLS 
Sbjct: 85  ITSKANGKLRTLGLFNCMKITDGGLQTVIERNPLINKLYVPGCTGLTPEGVINAVKTLSA 144

Query: 126 KSTAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKDVRTID 185
                 S+KINGIYN+ K+HL +LQSY+      ++ +   HK  +      D ++  +D
Sbjct: 145 HGNILQSIKINGIYNLQKQHLQVLQSYVQ-----ENPKTLEHKCSTHFGLEGDCNICPLD 204

Query: 186 VEICPKCIEVKLVFHCPKET----------ECIGCFQCIPRCEVCGRCISDQDEDDQGET 245
           VEICPKC EV+ VF CP ET          EC GC  CIPRC  CG C+ + D+ ++ E 
Sbjct: 205 VEICPKCNEVRKVFICPIETCVRKRDRRLSECRGCSSCIPRCIQCGACV-EPDDLEEAEA 264

Query: 246 ICNDTVCLDCWLCLPKCNHCNKPFCPRHAPHKLDPLDSQGFLCEVC 282
           IC D +C+ CWL LPKC+ CNKP+C +HA  +L+P  S+GF+CE+C
Sbjct: 265 ICADILCMRCWLQLPKCDFCNKPYCKQHAEGQLNPSGSRGFVCELC 304

[Close]

BLAST of Spo16425.1 vs. ExPASy Swiss-Prot
Match: SKI28_ARATH (F-box protein SKIP28 OS=Arabidopsis thaliana GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.600e-56
Identity = 117/293 (39.93%), Postives = 172/293 (58.70%), Query Frame = 1

		  
Query: 9   HQALYFVLAYL-PLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQILMNIS 68
           H+ L  VL YL  L +LL + +V +S +D+IRD+  +W  LV+E PLS RLTD IL   S
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 69  SKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVETLSGKS 128
           SK+ G+L+TL L  C+ +T++GL  VV++NPL+TK+ VP C+GLTPEG+++ VE+LS  +
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSKNN 136

Query: 129 TAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKDVRTIDVE 188
               ++ ING+    K+HL  L +YL+++                          TID+E
Sbjct: 137 HKLETLHINGVNGFTKQHLSALYTYLSSEG-------------------------TIDLE 196

Query: 189 ICPKCIEVKLVFHCPKET------ECIGCFQCIPRCEVCGRCISDQDEDDQGETIC--ND 248
           +CPKC EV+++  C +E+      +C GC+ CIPRC  C  C+   D + Q E  C  +D
Sbjct: 197 VCPKCDEVRMIPSCSRESCNQKQRKCRGCWLCIPRCAECAVCLVGSDTESQ-EAACGNDD 256

Query: 249 TVCLDCWLCLPKCNHCNKPFCPRHAPHK-----LDPLDSQGFLCEVCHTKSLT 288
            +CL+CWL LPKC  CNKP+C  H+  +      D      F CE C+ ++ T
Sbjct: 257 VLCLECWLVLPKCRFCNKPYCTNHSSRRHEIAITDAASRPSFECEACYYRAGT 283

[Close]

BLAST of Spo16425.1 vs. ExPASy Swiss-Prot
Match: SKI14_ARATH (F-box protein SKIP14 OS=Arabidopsis thaliana GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.400e-36
Identity = 91/258 (35.27%), Postives = 141/258 (54.65%), Query Frame = 1

		  
Query: 9   HQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQILMNISS 68
           H A+ F L +L  + LL VS VCKS   ++ DD L+W ++ +  PL+ ++T++ L++++ 
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 69  KAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVETLSGKST 128
           +A G ++ L +++C +ITD+ L  VV  N  + K+ VP CT +T +G++  +  L  KS 
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDL--KSA 320

Query: 129 AFISVK---INGIYNINKEHLVILQSYLTTDNTIK---SKRRFYHKYRSSSLCSLDKDVR 188
             + VK   + G++ + K+H   L   L  DN +K    K RFYH+  +   C    D R
Sbjct: 321 GKLQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVKQTIQKPRFYHRGEACVSCD---DDR 380

Query: 189 TIDVEICPKCIEVKLVFHCPKE---------TECIGCFQCIPRCEVCGRCISDQDEDDQG 248
            +D+E+CPKC   KLV+ CP E          EC  C  CI RC  CGRCI D + +   
Sbjct: 381 ALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYE--- 440

Query: 249 ETICNDTVCLDCWLCLPK 252
           E  C + +C  C    PK
Sbjct: 441 EMFCLELLCAVCSKPTPK 450

[Close]

BLAST of Spo16425.1 vs. ExPASy Swiss-Prot
Match: FB327_ARATH (F-box protein At3g27290 OS=Arabidopsis thaliana GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.200e-27
Identity = 83/238 (34.87%), Postives = 118/238 (49.58%), Query Frame = 1

		  
Query: 6   GPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENP-LSVRLTDQILM 65
           G  H A   VL YL L+++L V  VC+S +DS+  +   W ++ + +  L  R+TD+ L+
Sbjct: 125 GEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLL 184

Query: 66  NISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVETLS 125
            ++ +A G +R L L  CV ITD GL  V+ SNP LTKL V  C  L+  G++  +  L 
Sbjct: 185 KLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLK 244

Query: 126 GKSTAFI-SVKINGIYNINKEHLVILQSYLTTDNTI---KSKRRFYHKYRSSSLCSLDKD 185
             +   + S+   G     KE    L   L  D  +   + K+RFY   RS       +D
Sbjct: 245 SSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQERKKRFYTSCRSEFYL---ED 304

Query: 186 VRTIDVEICPKCIEVKLVFHCPKET------------ECIGCFQCIPRCEVCGRCISD 227
            R  D+EICP C +  LVF CP +T             C  C  CI RC  CG C++D
Sbjct: 305 DRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLND 359

[Close]

BLAST of Spo16425.1 vs. TAIR (Arabidopsis)
Match: AT2G01620.1 (RNI-like superfamily protein)

HSP 1 Score: 221.1 bits (562), Expect = 9.000e-58
Identity = 117/293 (39.93%), Postives = 172/293 (58.70%), Query Frame = 1

		  
Query: 9   HQALYFVLAYL-PLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQILMNIS 68
           H+ L  VL YL  L +LL + +V +S +D+IRD+  +W  LV+E PLS RLTD IL   S
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 69  SKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVETLSGKS 128
           SK+ G+L+TL L  C+ +T++GL  VV++NPL+TK+ VP C+GLTPEG+++ VE+LS  +
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSKNN 136

Query: 129 TAFISVKINGIYNINKEHLVILQSYLTTDNTIKSKRRFYHKYRSSSLCSLDKDVRTIDVE 188
               ++ ING+    K+HL  L +YL+++                          TID+E
Sbjct: 137 HKLETLHINGVNGFTKQHLSALYTYLSSEG-------------------------TIDLE 196

Query: 189 ICPKCIEVKLVFHCPKET------ECIGCFQCIPRCEVCGRCISDQDEDDQGETIC--ND 248
           +CPKC EV+++  C +E+      +C GC+ CIPRC  C  C+   D + Q E  C  +D
Sbjct: 197 VCPKCDEVRMIPSCSRESCNQKQRKCRGCWLCIPRCAECAVCLVGSDTESQ-EAACGNDD 256

Query: 249 TVCLDCWLCLPKCNHCNKPFCPRHAPHK-----LDPLDSQGFLCEVCHTKSLT 288
            +CL+CWL LPKC  CNKP+C  H+  +      D      F CE C+ ++ T
Sbjct: 257 VLCLECWLVLPKCRFCNKPYCTNHSSRRHEIAITDAASRPSFECEACYYRAGT 283

[Close]

BLAST of Spo16425.1 vs. TAIR (Arabidopsis)
Match: AT3G26000.1 (Ribonuclease inhibitor)

HSP 1 Score: 154.8 bits (390), Expect = 8.000e-38
Identity = 91/258 (35.27%), Postives = 141/258 (54.65%), Query Frame = 1

		  
Query: 9   HQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENPLSVRLTDQILMNISS 68
           H A+ F L +L  + LL VS VCKS   ++ DD L+W ++ +  PL+ ++T++ L++++ 
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 69  KAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVETLSGKST 128
           +A G ++ L +++C +ITD+ L  VV  N  + K+ VP CT +T +G++  +  L  KS 
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDL--KSA 320

Query: 129 AFISVK---INGIYNINKEHLVILQSYLTTDNTIK---SKRRFYHKYRSSSLCSLDKDVR 188
             + VK   + G++ + K+H   L   L  DN +K    K RFYH+  +   C    D R
Sbjct: 321 GKLQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVKQTIQKPRFYHRGEACVSCD---DDR 380

Query: 189 TIDVEICPKCIEVKLVFHCPKE---------TECIGCFQCIPRCEVCGRCISDQDEDDQG 248
            +D+E+CPKC   KLV+ CP E          EC  C  CI RC  CGRCI D + +   
Sbjct: 381 ALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYE--- 440

Query: 249 ETICNDTVCLDCWLCLPK 252
           E  C + +C  C    PK
Sbjct: 441 EMFCLELLCAVCSKPTPK 450

[Close]

BLAST of Spo16425.1 vs. TAIR (Arabidopsis)
Match: AT3G27290.1 (RNI-like superfamily protein)

HSP 1 Score: 125.2 bits (313), Expect = 6.800e-29
Identity = 83/238 (34.87%), Postives = 118/238 (49.58%), Query Frame = 1

		  
Query: 6   GPQHQALYFVLAYLPLQQLLLVSQVCKSFKDSIRDDVLVWLNLVVENP-LSVRLTDQILM 65
           G  H A   VL YL L+++L V  VC+S +DS+  +   W ++ + +  L  R+TD+ L+
Sbjct: 125 GEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLL 184

Query: 66  NISSKAHGRLRTLALLNCVKITDEGLLNVVNSNPLLTKLYVPACTGLTPEGVIKAVETLS 125
            ++ +A G +R L L  CV ITD GL  V+ SNP LTKL V  C  L+  G++  +  L 
Sbjct: 185 KLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLK 244

Query: 126 GKSTAFI-SVKINGIYNINKEHLVILQSYLTTDNTI---KSKRRFYHKYRSSSLCSLDKD 185
             +   + S+   G     KE    L   L  D  +   + K+RFY   RS       +D
Sbjct: 245 SSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQERKKRFYTSCRSEFYL---ED 304

Query: 186 VRTIDVEICPKCIEVKLVFHCPKET------------ECIGCFQCIPRCEVCGRCISD 227
            R  D+EICP C +  LVF CP +T             C  C  CI RC  CG C++D
Sbjct: 305 DRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLND 359

The following BLAST results are available for this feature:

BLAST of Spo16425.1 vs. NCBI nr
BLAST of Spo16425.1 vs. UniProtKB/TrEMBL
BLAST of Spo16425.1 vs. ExPASy Swiss-Prot
BLAST of Spo16425.1 vs. TAIR (Arabidopsis)

BLAST of Spo16425.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902198464\|gb\|KNA13676.1\|	2.0e-160	99.2	hypothetical protein SOVF_1144...	[more]
gi\|731341474\|ref\|XP_010681919.1\|	2.6e-115	72.9	PREDICTED: F-box protein SKIP2...	[more]
gi\|225424337\|ref\|XP_002284829.1\|	2.7e-80	49.6	PREDICTED: F-box protein SKIP2...	[more]
gi\|823134883\|ref\|XP_012467235.1\|	2.7e-80	51.0	PREDICTED: F-box protein SKIP2...	[more]
gi\|470122852\|ref\|XP_004297452.1\|	7.9e-80	50.8	PREDICTED: F-box protein SKIP2...	[more]

BLAST of Spo16425.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9R2E1_SPIOL	1.4e-160	99.2	Uncharacterized protein (Fragm...	[more]
A0A0J8C2Q0_BETVU	1.8e-115	72.9	Uncharacterized protein OS=Bet...	[more]
A0A0D2Q803_GOSRA	1.9e-80	51.0	Uncharacterized protein OS=Gos...	[more]
A0A061E7T8_THECC	1.1e-77	49.3	RNI-like superfamily protein, ...	[more]
A0A059D6P7_EUCGR	4.4e-77	51.4	Uncharacterized protein OS=Euc...	[more]

BLAST of Spo16425.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
SKI28_ARATH	1.6e-56	39.9	F-box protein SKIP28 OS=Arabid...	[more]
SKI14_ARATH	1.4e-36	35.2	F-box protein SKIP14 OS=Arabid...	[more]
FB327_ARATH	1.2e-27	34.8	F-box protein At3g27290 OS=Ara...	[more]

BLAST of Spo16425.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT2G01620.1	9.0e-58	39.9	RNI-like superfamily protein	[more]
AT3G26000.1	8.0e-38	35.2	Ribonuclease inhibitor	[more]
AT3G27290.1	6.8e-29	34.8	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 12..56 score: 9.5
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 207..218 scor
None	No IPR available	unknown	SSF52047	RNI-like	coord: 58..153 score: 2.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0009718	anthocyanin-containing compound biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0080141	regulation of jasmonic acid biosynthetic process
biological_process	GO:0010119	regulation of stomatal movement
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009845	seed germination
biological_process	GO:0007033	vacuole organization
biological_process	GO:0006265	DNA topological change
biological_process	GO:0010478	chlororespiration
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0042335	cuticle development
biological_process	GO:0061025	membrane fusion
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0009409	response to cold
biological_process	GO:0000038	very long-chain fatty acid metabolic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:1901137	carbohydrate derivative biosynthetic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009556	microsporogenesis
biological_process	GO:0034765	regulation of ion transmembrane transport
biological_process	GO:0086010	membrane depolarization during action potential
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0006418	tRNA aminoacylation for protein translation
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0009408	response to heat
biological_process	GO:0006457	protein folding
biological_process	GO:0051026	chiasma assembly
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0042138	meiotic DNA double-strand break formation
biological_process	GO:0007030	Golgi organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0048868	pollen tube development
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0070588	calcium ion transmembrane transport
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0052543	callose deposition in cell wall
biological_process	GO:0006952	defense response
cellular_component	GO:0005694	chromosome
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009501	amyloplast
cellular_component	GO:0005835	fatty acid synthase complex
cellular_component	GO:0005891	voltage-gated calcium channel complex
cellular_component	GO:0000325	plant-type vacuole
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005657	replication fork
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0044183	protein binding involved in protein folding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008422	beta-glucosidase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003678	DNA helicase activity
molecular_function	GO:0005245	voltage-gated calcium channel activity
molecular_function	GO:0050662	coenzyme binding
molecular_function	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity
molecular_function	GO:0009011	starch synthase activity
molecular_function	GO:0051213	dioxygenase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0004022	alcohol dehydrogenase (NAD) activity
molecular_function	GO:0051903	S-(hydroxymethyl)glutathione dehydrogenase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17621	0.76	Barchart \| Table
Spo15615	0.75	Barchart \| Table
Spo19748	0.74	Barchart \| Table
Spo00360	0.72	Barchart \| Table
Spo02503	0.71	Barchart \| Table
Spo04610	0.71	Barchart \| Table
Spo26001	0.70	Barchart \| Table
Spo01566	0.70	Barchart \| Table
Spo03524	0.69	Barchart \| Table
Spo08599	0.69	Barchart \| Table
Spo08765	0.69	Barchart \| Table
Spo09155	0.69	Barchart \| Table
Spo16857	0.68	Barchart \| Table
Spo15689	0.68	Barchart \| Table
Spo03221	0.68	Barchart \| Table
Spo11180	0.67	Barchart \| Table
Spo00341	0.67	Barchart \| Table
Spo10859	0.67	Barchart \| Table
Spo16209	0.67	Barchart \| Table
Spo21207	0.67	Barchart \| Table
Spo21811	0.67	Barchart \| Table
Spo13780	0.66	Barchart \| Table
Spo16892	0.66	Barchart \| Table
Spo06174	0.66	Barchart \| Table
Spo03212	0.66	Barchart \| Table
Spo22291	0.65	Barchart \| Table
Spo14408	0.65	Barchart \| Table
Spo00263	0.65	Barchart \| Table
Spo15731	0.65	Barchart \| Table