Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCACCTTGAAGGCTTTAAGGAAAGGAAGACTAGAGGAGAAGAATGGCAGCTTTTATGTGATAGCCTAGAAGTTATGTTCGTAACTCCTTCTCATAATCAGAAGGTATAATTTGTAATGTTATTGTGAGTCTTGTGACTCGTTAAAACAAAAAAAGGTATTTTGCACTCAATCCTTTTAAAAAGTTATTATCAGTTTTTTTTTTTTTTTTTTTTTCGTANTAACTTTTATATTAGTAATAAAAAAGTTGATAAATAAACATTTTAAAGGGTTAAATGATTAATTTTATACATTATTTGTCATTTTAAAGAAATAAGTTTTACTAAAATTAAAAAATTTATCACTAAAAAATACATAACTTTTACATATATAAGCTTAACTTTTAAGCATTTTGAGTTAACTTTTACTTTGGTGTACAATATTTATTGTACACCCATTGTAAATAAGAATTTGTGTAATTATTTTATATTTGTGCTTTGTGCAGTGGTGACCAAGATTCAGTATTACCATTAACCGGATCAAGAATTCTGGTAACCCAATTGGCAAAGGACTTGGGACTGAAAACTACCGTGCCTTACAGAACCTGGTTAACAGATAAACAGGTCACTTTACTTATGTCTTTATTTGCTCCTTATGCACTCCATACAGAATCATAATCACTTTGGTGGTGTTAATCCCGTGTTAATATAACAAGTCACATAAAATTCAAACCGACGGGAAAATAGTTACCAAATTACTTCTAGGTCTACTTAGACCATTCTAGGTAACTAATAAAAAATTTACCAAATTTCAAGTCTAACCAAAACAGTAAAAAGAAAAGGATCCTAATTCTGAAGAGACATTTTAATGTTGGCAGGTTGGTGGGTGGACGCAAGTATATGGTGACATTCTTGCATATGCAACTATTAGAGGAGCAGCCCATGAAGCTCCATTTTCGCAACCGGCTCGATCTCTCACGCTTTTCCGCTCCTTCCTCGAGGGGAAGCCACTTCCAGATGTTTAATAGCCCGATAATTTGTGGAATCAAATATGAAAACCACTTGATTCGATGATTCAATAACCATACCCTCATAGATAGCAAACTTCAGAAACTGTATGGATTTGAATATAGGTCTCAAATATGATAATACAAGAATGCATTGCTAATTTGCTACAACCCAGAAAGCTTCAATGATTTTATACAACTATTTCCTGCTTGCATTTGTTGTGATAACATTTAAACAGAACAACAATCAAGTTGTGCAAAGTTTTCTAGTTCGAACCAACAAACTAAGATGGCAAAAACACGCGCACTAAATCAAAATTTGATATTCAATATGGCTCTGAGTAGCAAAGACAAACTCGAGTCTACAACAACATACACATTTTTTGTGG ATGGTCACCTTGAAGGCTTTAAGGAAAGGAAGACTAGAGGAGAAGAATGGCAGCTTTTATGTTGGTGGGTGGACGCAAGTATATGGTGACATTCTTGCATATGCAACTATTAGAGGAGCAGCCCATGAAGCTCCATTTTCGCAACCGGCTCGATCTCTCACGCTTTTCCGCTCCTTCCTCGAGGGGAAGCCACTTCCAGATGTTTAATAGCCCGATAATTTGTGGAATCAAATATGAAAACCACTTGATTCGATGATTCAATAACCATACCCTCATAGATAGCAAACTTCAGAAACTGTATGGATTTGAATATAGGTCTCAAATATGATAATACAAGAATGCATTGCTAATTTGCTACAACCCAGAAAGCTTCAATGATTTTATACAACTATTTCCTGCTTGCATTTGTTGTGATAACATTTAAACAGAACAACAATCAAGTTGTGCAAAGTTTTCTAGTTCGAACCAACAAACTAAGATGGCAAAAACACGCGCACTAAATCAAAATTTGATATTCAATATGGCTCTGAGTAGCAAAGACAAACTCGAGTCTACAACAACATACACATTTTTTGTGG ATGGTCACCTTGAAGGCTTTAAGGAAAGGAAGACTAGAGGAGAAGAATGGCAGCTTTTATGTTGGTGGGTGGACGCAAGTATATGGTGACATTCTTGCATATGCAACTATTAGAGGAGCAGCCCATGAAGCTCCATTTTCGCAACCGGCTCGATCTCTCACGCTTTTCCGCTCCTTCCTCGAGGGGAAGCCACTTCCAGATGTTTAA MVTLKALRKGRLEEKNGSFYVGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16429.1 vs. NCBI nr
Match: gi|902226038|gb|KNA20259.1| (hypothetical protein SOVF_053730 [Spinacia oleracea]) HSP 1 Score: 102.8 bits (255), Expect = 2.400e-19 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1
BLAST of Spo16429.1 vs. NCBI nr
Match: gi|731324594|ref|XP_010673054.1| (PREDICTED: serine carboxypeptidase-like 45 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 97.1 bits (240), Expect = 1.300e-17 Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1
BLAST of Spo16429.1 vs. NCBI nr
Match: gi|870864076|gb|KMT15209.1| (hypothetical protein BVRB_3g063200 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 97.1 bits (240), Expect = 1.300e-17 Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1
BLAST of Spo16429.1 vs. NCBI nr
Match: gi|590670637|ref|XP_007038111.1| (Serine carboxypeptidase-like 45 isoform 2 [Theobroma cacao]) HSP 1 Score: 92.4 bits (228), Expect = 3.200e-16 Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 1
BLAST of Spo16429.1 vs. NCBI nr
Match: gi|590670634|ref|XP_007038110.1| (Serine carboxypeptidase-like 45 isoform 1 [Theobroma cacao]) HSP 1 Score: 91.3 bits (225), Expect = 7.100e-16 Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1
BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMX3_SPIOL (Carboxypeptidase OS=Spinacia oleracea GN=SOVF_053730 PE=3 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.700e-19 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1
BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CT19_BETVU (Carboxypeptidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g063200 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 9.100e-18 Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1
BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A061G0A1_THECC (Carboxypeptidase OS=Theobroma cacao GN=TCM_014737 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.200e-16 Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 1
BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A061FZC8_THECC (Carboxypeptidase OS=Theobroma cacao GN=TCM_014737 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 5.000e-16 Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1
BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A0D2SE20_GOSRA (Carboxypeptidase OS=Gossypium raimondii GN=B456_007G044700 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.100e-15 Identity = 40/48 (83.33%), Postives = 46/48 (95.83%), Query Frame = 1
BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.200e-15 Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 2.700e-15 Identity = 33/47 (70.21%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 5.800e-10 Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 1
BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2) HSP 1 Score: 64.3 bits (155), Expect = 5.800e-10 Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 1
BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.000e-9 Identity = 24/47 (51.06%), Postives = 37/47 (78.72%), Query Frame = 1
BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT2G33530.1 (serine carboxypeptidase-like 46) HSP 1 Score: 83.2 bits (204), Expect = 6.900e-17 Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT1G28110.1 (serine carboxypeptidase-like 45) HSP 1 Score: 82.0 bits (201), Expect = 1.500e-16 Identity = 33/47 (70.21%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT1G43780.1 (serine carboxypeptidase-like 44) HSP 1 Score: 64.3 bits (155), Expect = 3.300e-11 Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 1
BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT2G24010.1 (serine carboxypeptidase-like 23) HSP 1 Score: 64.3 bits (155), Expect = 3.300e-11 Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 1
BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT2G12480.2 (serine carboxypeptidase-like 43) HSP 1 Score: 63.5 bits (153), Expect = 5.600e-11 Identity = 24/47 (51.06%), Postives = 37/47 (78.72%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16429.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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