Spo16429 (gene)

Overview
NameSpo16429
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCarboxypeptidase (3.4.16.-)
LocationSpoScf_01746 : 92419 .. 93794 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCACCTTGAAGGCTTTAAGGAAAGGAAGACTAGAGGAGAAGAATGGCAGCTTTTATGTGATAGCCTAGAAGTTATGTTCGTAACTCCTTCTCATAATCAGAAGGTATAATTTGTAATGTTATTGTGAGTCTTGTGACTCGTTAAAACAAAAAAAGGTATTTTGCACTCAATCCTTTTAAAAAGTTATTATCAGTTTTTTTTTTTTTTTTTTTTTCGTANTAACTTTTATATTAGTAATAAAAAAGTTGATAAATAAACATTTTAAAGGGTTAAATGATTAATTTTATACATTATTTGTCATTTTAAAGAAATAAGTTTTACTAAAATTAAAAAATTTATCACTAAAAAATACATAACTTTTACATATATAAGCTTAACTTTTAAGCATTTTGAGTTAACTTTTACTTTGGTGTACAATATTTATTGTACACCCATTGTAAATAAGAATTTGTGTAATTATTTTATATTTGTGCTTTGTGCAGTGGTGACCAAGATTCAGTATTACCATTAACCGGATCAAGAATTCTGGTAACCCAATTGGCAAAGGACTTGGGACTGAAAACTACCGTGCCTTACAGAACCTGGTTAACAGATAAACAGGTCACTTTACTTATGTCTTTATTTGCTCCTTATGCACTCCATACAGAATCATAATCACTTTGGTGGTGTTAATCCCGTGTTAATATAACAAGTCACATAAAATTCAAACCGACGGGAAAATAGTTACCAAATTACTTCTAGGTCTACTTAGACCATTCTAGGTAACTAATAAAAAATTTACCAAATTTCAAGTCTAACCAAAACAGTAAAAAGAAAAGGATCCTAATTCTGAAGAGACATTTTAATGTTGGCAGGTTGGTGGGTGGACGCAAGTATATGGTGACATTCTTGCATATGCAACTATTAGAGGAGCAGCCCATGAAGCTCCATTTTCGCAACCGGCTCGATCTCTCACGCTTTTCCGCTCCTTCCTCGAGGGGAAGCCACTTCCAGATGTTTAATAGCCCGATAATTTGTGGAATCAAATATGAAAACCACTTGATTCGATGATTCAATAACCATACCCTCATAGATAGCAAACTTCAGAAACTGTATGGATTTGAATATAGGTCTCAAATATGATAATACAAGAATGCATTGCTAATTTGCTACAACCCAGAAAGCTTCAATGATTTTATACAACTATTTCCTGCTTGCATTTGTTGTGATAACATTTAAACAGAACAACAATCAAGTTGTGCAAAGTTTTCTAGTTCGAACCAACAAACTAAGATGGCAAAAACACGCGCACTAAATCAAAATTTGATATTCAATATGGCTCTGAGTAGCAAAGACAAACTCGAGTCTACAACAACATACACATTTTTTGTGG

mRNA sequence

ATGGTCACCTTGAAGGCTTTAAGGAAAGGAAGACTAGAGGAGAAGAATGGCAGCTTTTATGTTGGTGGGTGGACGCAAGTATATGGTGACATTCTTGCATATGCAACTATTAGAGGAGCAGCCCATGAAGCTCCATTTTCGCAACCGGCTCGATCTCTCACGCTTTTCCGCTCCTTCCTCGAGGGGAAGCCACTTCCAGATGTTTAATAGCCCGATAATTTGTGGAATCAAATATGAAAACCACTTGATTCGATGATTCAATAACCATACCCTCATAGATAGCAAACTTCAGAAACTGTATGGATTTGAATATAGGTCTCAAATATGATAATACAAGAATGCATTGCTAATTTGCTACAACCCAGAAAGCTTCAATGATTTTATACAACTATTTCCTGCTTGCATTTGTTGTGATAACATTTAAACAGAACAACAATCAAGTTGTGCAAAGTTTTCTAGTTCGAACCAACAAACTAAGATGGCAAAAACACGCGCACTAAATCAAAATTTGATATTCAATATGGCTCTGAGTAGCAAAGACAAACTCGAGTCTACAACAACATACACATTTTTTGTGG

Coding sequence (CDS)

ATGGTCACCTTGAAGGCTTTAAGGAAAGGAAGACTAGAGGAGAAGAATGGCAGCTTTTATGTTGGTGGGTGGACGCAAGTATATGGTGACATTCTTGCATATGCAACTATTAGAGGAGCAGCCCATGAAGCTCCATTTTCGCAACCGGCTCGATCTCTCACGCTTTTCCGCTCCTTCCTCGAGGGGAAGCCACTTCCAGATGTTTAA

Protein sequence

MVTLKALRKGRLEEKNGSFYVGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16429.1Spo16429.1mRNA


Homology
BLAST of Spo16429.1 vs. NCBI nr
Match: gi|902226038|gb|KNA20259.1| (hypothetical protein SOVF_053730 [Spinacia oleracea])

HSP 1 Score: 102.8 bits (255), Expect = 2.400e-19
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV
Sbjct: 414 VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 461

BLAST of Spo16429.1 vs. NCBI nr
Match: gi|731324594|ref|XP_010673054.1| (PREDICTED: serine carboxypeptidase-like 45 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 97.1 bits (240), Expect = 1.300e-17
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           VGGWTQVYGDILAYATIRGAAHEAPFSQPARSL LFRSFL G PLPDV
Sbjct: 415 VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLVLFRSFLNGSPLPDV 462

BLAST of Spo16429.1 vs. NCBI nr
Match: gi|870864076|gb|KMT15209.1| (hypothetical protein BVRB_3g063200 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 97.1 bits (240), Expect = 1.300e-17
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           VGGWTQVYGDILAYATIRGAAHEAPFSQPARSL LFRSFL G PLPDV
Sbjct: 411 VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLVLFRSFLNGSPLPDV 458

BLAST of Spo16429.1 vs. NCBI nr
Match: gi|590670637|ref|XP_007038111.1| (Serine carboxypeptidase-like 45 isoform 2 [Theobroma cacao])

HSP 1 Score: 92.4 bits (228), Expect = 3.200e-16
Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 1

		  

Query: 18  SFYVGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           S  VGGWTQVYG+ILA+ATIRGA+HEAPFSQP RSL LF+SFLEGKPLP+V
Sbjct: 328 SLQVGGWTQVYGNILAFATIRGASHEAPFSQPERSLMLFKSFLEGKPLPEV 378

BLAST of Spo16429.1 vs. NCBI nr
Match: gi|590670634|ref|XP_007038110.1| (Serine carboxypeptidase-like 45 isoform 1 [Theobroma cacao])

HSP 1 Score: 91.3 bits (225), Expect = 7.100e-16
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           VGGWTQVYG+ILA+ATIRGA+HEAPFSQP RSL LF+SFLEGKPLP+V
Sbjct: 415 VGGWTQVYGNILAFATIRGASHEAPFSQPERSLMLFKSFLEGKPLPEV 462

BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMX3_SPIOL (Carboxypeptidase OS=Spinacia oleracea GN=SOVF_053730 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.700e-19
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV
Sbjct: 414 VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 461

BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CT19_BETVU (Carboxypeptidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g063200 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.100e-18
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           VGGWTQVYGDILAYATIRGAAHEAPFSQPARSL LFRSFL G PLPDV
Sbjct: 411 VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLVLFRSFLNGSPLPDV 458

BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A061G0A1_THECC (Carboxypeptidase OS=Theobroma cacao GN=TCM_014737 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.200e-16
Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 1

		  

Query: 18  SFYVGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           S  VGGWTQVYG+ILA+ATIRGA+HEAPFSQP RSL LF+SFLEGKPLP+V
Sbjct: 328 SLQVGGWTQVYGNILAFATIRGASHEAPFSQPERSLMLFKSFLEGKPLPEV 378

BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A061FZC8_THECC (Carboxypeptidase OS=Theobroma cacao GN=TCM_014737 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.000e-16
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           VGGWTQVYG+ILA+ATIRGA+HEAPFSQP RSL LF+SFLEGKPLP+V
Sbjct: 415 VGGWTQVYGNILAFATIRGASHEAPFSQPERSLMLFKSFLEGKPLPEV 462

BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Match: A0A0D2SE20_GOSRA (Carboxypeptidase OS=Gossypium raimondii GN=B456_007G044700 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.100e-15
Identity = 40/48 (83.33%), Postives = 46/48 (95.83%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPDV 69
           VGGWTQVYG+IL++ATIRGA+HEAPFSQP RSL LF+SFLEGKPLP+V
Sbjct: 414 VGGWTQVYGNILSFATIRGASHEAPFSQPERSLMLFKSFLEGKPLPEV 461

BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.200e-15
Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPD 68
           VGGWTQVYG+ LA+AT+RGAAHE PFSQPAR+L LF++FL G+PLP+
Sbjct: 417 VGGWTQVYGNTLAFATVRGAAHEVPFSQPARALVLFKAFLGGRPLPE 463

BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.700e-15
Identity = 33/47 (70.21%), Postives = 43/47 (91.49%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPD 68
           VGGWTQVYG++L++AT+RGA+HE PFSQP RSL LF++FL+G PLP+
Sbjct: 413 VGGWTQVYGNVLSFATVRGASHEVPFSQPERSLVLFKAFLDGHPLPE 459

BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 5.800e-10
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLP 67
           VGGW   YG++L +AT+RGAAH  P+SQP+R+L LF SF+ G+ LP
Sbjct: 425 VGGWVVEYGNLLTFATVRGAAHMVPYSQPSRALHLFTSFVLGRKLP 470

BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 5.800e-10
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLP 67
           VGGWT+VY + L +ATIRGA HE P  QP R+LTL RSFL GK LP
Sbjct: 407 VGGWTEVY-EGLTFATIRGAGHEVPVLQPERALTLLRSFLAGKELP 451

BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.000e-9
Identity = 24/47 (51.06%), Postives = 37/47 (78.72%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPD 68
           VGGW   YG++L +AT+RGAAH  P+++P+R+L +F SF+ G+ LP+
Sbjct: 386 VGGWVTEYGNLLTFATVRGAAHMVPYAEPSRALHMFSSFMNGRRLPN 432

BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT2G33530.1 (serine carboxypeptidase-like 46)

HSP 1 Score: 83.2 bits (204), Expect = 6.900e-17
Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPD 68
           VGGWTQVYG+ LA+AT+RGAAHE PFSQPAR+L LF++FL G+PLP+
Sbjct: 417 VGGWTQVYGNTLAFATVRGAAHEVPFSQPARALVLFKAFLGGRPLPE 463

BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT1G28110.1 (serine carboxypeptidase-like 45)

HSP 1 Score: 82.0 bits (201), Expect = 1.500e-16
Identity = 33/47 (70.21%), Postives = 43/47 (91.49%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPD 68
           VGGWTQVYG++L++AT+RGA+HE PFSQP RSL LF++FL+G PLP+
Sbjct: 413 VGGWTQVYGNVLSFATVRGASHEVPFSQPERSLVLFKAFLDGHPLPE 459

BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT1G43780.1 (serine carboxypeptidase-like 44)

HSP 1 Score: 64.3 bits (155), Expect = 3.300e-11
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLP 67
           VGGW   YG++L +AT+RGAAH  P+SQP+R+L LF SF+ G+ LP
Sbjct: 425 VGGWVVEYGNLLTFATVRGAAHMVPYSQPSRALHLFTSFVLGRKLP 470

BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT2G24010.1 (serine carboxypeptidase-like 23)

HSP 1 Score: 64.3 bits (155), Expect = 3.300e-11
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLP 67
           VGGWT+VY + L +ATIRGA HE P  QP R+LTL RSFL GK LP
Sbjct: 393 VGGWTEVY-EGLTFATIRGAGHEVPVLQPERALTLLRSFLAGKELP 437

BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Match: AT2G12480.2 (serine carboxypeptidase-like 43)

HSP 1 Score: 63.5 bits (153), Expect = 5.600e-11
Identity = 24/47 (51.06%), Postives = 37/47 (78.72%), Query Frame = 1

		  

Query: 21  VGGWTQVYGDILAYATIRGAAHEAPFSQPARSLTLFRSFLEGKPLPD 68
           VGGW   YG++L +AT+RGAAH  P+++P+R+L +F SF+ G+ LP+
Sbjct: 387 VGGWVTEYGNLLTFATVRGAAHMVPYAEPSRALHMFSSFMNGRRLPN 433

The following BLAST results are available for this feature:
BLAST of Spo16429.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902226038|gb|KNA20259.1|2.4e-19100.hypothetical protein SOVF_0537... [more]
gi|731324594|ref|XP_010673054.1|1.3e-1793.7PREDICTED: serine carboxypepti... [more]
gi|870864076|gb|KMT15209.1|1.3e-1793.7hypothetical protein BVRB_3g06... [more]
gi|590670637|ref|XP_007038111.1|3.2e-1682.3Serine carboxypeptidase-like 4... [more]
gi|590670634|ref|XP_007038110.1|7.1e-1685.4Serine carboxypeptidase-like 4... [more]
back to top
BLAST of Spo16429.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RMX3_SPIOL1.7e-19100.Carboxypeptidase OS=Spinacia o... [more]
A0A0J8CT19_BETVU9.1e-1893.7Carboxypeptidase OS=Beta vulga... [more]
A0A061G0A1_THECC2.2e-1682.3Carboxypeptidase OS=Theobroma ... [more]
A0A061FZC8_THECC5.0e-1685.4Carboxypeptidase OS=Theobroma ... [more]
A0A0D2SE20_GOSRA1.1e-1583.3Carboxypeptidase OS=Gossypium ... [more]
back to top
BLAST of Spo16429.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SCP46_ARATH1.2e-1574.4Serine carboxypeptidase-like 4... [more]
SCP45_ARATH2.7e-1570.2Serine carboxypeptidase-like 4... [more]
SCP44_ARATH5.8e-1058.7Serine carboxypeptidase-like 4... [more]
SCP23_ARATH5.8e-1067.3Putative serine carboxypeptida... [more]
SCP43_ARATH1.0e-951.0Serine carboxypeptidase-like 4... [more]
back to top
BLAST of Spo16429.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G33530.16.9e-1774.4serine carboxypeptidase-like 4... [more]
AT1G28110.11.5e-1670.2serine carboxypeptidase-like 4... [more]
AT1G43780.13.3e-1158.7serine carboxypeptidase-like 4... [more]
AT2G24010.13.3e-1167.3serine carboxypeptidase-like 2... [more]
AT2G12480.25.6e-1151.0serine carboxypeptidase-like 4... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001563Peptidase S10, serine carboxypeptidasePANTHERPTHR11802SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASEcoord: 21..68
score: 5.0
IPR001563Peptidase S10, serine carboxypeptidasePFAMPF00450Peptidase_S10coord: 18..62
score: 1.
NoneNo IPR availablePANTHERPTHR11802:SF82SERINE CARBOXYPEPTIDASE-LIKE 45-RELATEDcoord: 21..68
score: 5.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0048312 intracellular distribution of mitochondria
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0005840 ribosome
molecular_function GO:0004185 serine-type carboxypeptidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003743 translation initiation factor activity
RNA-Seq Expression
   



Co-expression