Spo16436 (gene)

Overview
NameSpo16436
Typegene
OrganismSpinacia oleracea (Spinach)
Description50S ribosomal protein L10, putative
Locationchr1 : 18580642 .. 18581340 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCCACCCTTTTCCTCTCCAAACCTCTTCCGACCACCATCAAAACCACCACCCACTCTCTCTCCTCCGTCTACCCAAACCCCTTCAAACCCAACAACCTCACATTCCCCCGCACCACCCACAAACACCCCACCACCACCACTATCACCGCTGCAATCAGCCGCACAAAGAAGGAAGAAACAGTGGAAACAGTACAGAAGCACCTCGAAAACTGCTACCTTTTAGCCGCAATCAACTACAAGGGTTTCACTGTCAAGCAATTCCAAGATCTCAGGAAAGCACTCCCGGAAAATACAACCTTAATTGTTGCTAAAAATACCCTTGTTGAGAAAGCAGTACAGGACACACAATGGGCAGCCATTAAACCTTGTATGAAAGGCATGAATGCTTGGCTTTTTGTTCATTCTGAAGAAATCCCAATTGCAATTAAGCCTTATAGAACTTTCCAGAAGGAGAGGAAGCTTGAGGATAATGACTTCACTGGTGCTTGTTTTGAGGGTAAGTTTTATGGGCCTGGTGAGGTCAAGAGATTGGAGACAATGCCTTCAAAGGCTGAGATTTTCGCGAAATTGCTCGGTTCTTTGAAGAGTCCTGGAAGTGCTCTTGTGGGTACTTTGCAGGCTCCTGCTAGGGATTTGGTGTTTCTTTTGAAGGCTTATATTAAGAAGCTTGAGGATGAGCAGCAGCAAGGCTGA

mRNA sequence

ATGGAGTCCACCCTTTTCCTCTCCAAACCTCTTCCGACCACCATCAAAACCACCACCCACTCTCTCTCCTCCGTCTACCCAAACCCCTTCAAACCCAACAACCTCACATTCCCCCGCACCACCCACAAACACCCCACCACCACCACTATCACCGCTGCAATCAGCCGCACAAAGAAGGAAGAAACAGTGGAAACAGTACAGAAGCACCTCGAAAACTGCTACCTTTTAGCCGCAATCAACTACAAGGGTTTCACTGTCAAGCAATTCCAAGATCTCAGGAAAGCACTCCCGGAAAATACAACCTTAATTGTTGCTAAAAATACCCTTGTTGAGAAAGCAGTACAGGACACACAATGGGCAGCCATTAAACCTTGTATGAAAGGCATGAATGCTTGGCTTTTTGTTCATTCTGAAGAAATCCCAATTGCAATTAAGCCTTATAGAACTTTCCAGAAGGAGAGGAAGCTTGAGGATAATGACTTCACTGGTGCTTGTTTTGAGGGTAAGTTTTATGGGCCTGGTGAGGTCAAGAGATTGGAGACAATGCCTTCAAAGGCTGAGATTTTCGCGAAATTGCTCGGTTCTTTGAAGAGTCCTGGAAGTGCTCTTGTGGGTACTTTGCAGGCTCCTGCTAGGGATTTGGTGTTTCTTTTGAAGGCTTATATTAAGAAGCTTGAGGATGAGCAGCAGCAAGGCTGA

Coding sequence (CDS)

ATGGAGTCCACCCTTTTCCTCTCCAAACCTCTTCCGACCACCATCAAAACCACCACCCACTCTCTCTCCTCCGTCTACCCAAACCCCTTCAAACCCAACAACCTCACATTCCCCCGCACCACCCACAAACACCCCACCACCACCACTATCACCGCTGCAATCAGCCGCACAAAGAAGGAAGAAACAGTGGAAACAGTACAGAAGCACCTCGAAAACTGCTACCTTTTAGCCGCAATCAACTACAAGGGTTTCACTGTCAAGCAATTCCAAGATCTCAGGAAAGCACTCCCGGAAAATACAACCTTAATTGTTGCTAAAAATACCCTTGTTGAGAAAGCAGTACAGGACACACAATGGGCAGCCATTAAACCTTGTATGAAAGGCATGAATGCTTGGCTTTTTGTTCATTCTGAAGAAATCCCAATTGCAATTAAGCCTTATAGAACTTTCCAGAAGGAGAGGAAGCTTGAGGATAATGACTTCACTGGTGCTTGTTTTGAGGGTAAGTTTTATGGGCCTGGTGAGGTCAAGAGATTGGAGACAATGCCTTCAAAGGCTGAGATTTTCGCGAAATTGCTCGGTTCTTTGAAGAGTCCTGGAAGTGCTCTTGTGGGTACTTTGCAGGCTCCTGCTAGGGATTTGGTGTTTCTTTTGAAGGCTTATATTAAGAAGCTTGAGGATGAGCAGCAGCAAGGCTGA

Protein sequence

MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISRTKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16436.1Spo16436.1mRNA


Homology
BLAST of Spo16436.1 vs. NCBI nr
Match: gi|902201840|gb|KNA14105.1| (hypothetical protein SOVF_110360 [Spinacia oleracea])

HSP 1 Score: 462.6 bits (1189), Expect = 4.000e-127
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1

		  

Query: 1   MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISRTKKE 60
           MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISRTKKE
Sbjct: 1   MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISRTKKE 60

Query: 61  ETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWA 120
           ETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWA
Sbjct: 61  ETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWA 120

Query: 121 AIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLE 180
           AIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLE
Sbjct: 121 AIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLE 180

Query: 181 TMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG 233
           TMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG
Sbjct: 181 TMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG 232

BLAST of Spo16436.1 vs. NCBI nr
Match: gi|731362825|ref|XP_010693095.1| (PREDICTED: 50S ribosomal protein L10, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 359.0 bits (920), Expect = 6.300e-96
Identity = 184/233 (78.97%), Postives = 206/233 (88.41%), Query Frame = 1

		  

Query: 1   MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTT-TITAAISRTKK 60
           ME+TLFLSKPLP T    +HSL+S +PNP K   L F  TTHK PT+  TITAAISRTKK
Sbjct: 1   METTLFLSKPLPPT--KLSHSLTSSFPNPHK---LAFFPTTHKKPTSNFTITAAISRTKK 60

Query: 61  EETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQW 120
           EETVETV+ HLENCYL+AAINYKGFTVKQFQ+LRKALPE T L+VAKNTLVEKAV++TQW
Sbjct: 61  EETVETVKSHLENCYLVAAINYKGFTVKQFQELRKALPETTKLVVAKNTLVEKAVENTQW 120

Query: 121 AAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRL 180
            AIKPCMKGMNAWLFVH+EEIP A+KPYRTFQKE+KLEDNDFTGACFEGKFYGP + K L
Sbjct: 121 EAIKPCMKGMNAWLFVHTEEIPGALKPYRTFQKEKKLEDNDFTGACFEGKFYGPEDFKGL 180

Query: 181 ETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG 233
           ETMPS+A+++AKLLGSLK+PG ALVGTLQAPARDLV +LKAYI KLE+EQQQG
Sbjct: 181 ETMPSRADVYAKLLGSLKTPGIALVGTLQAPARDLVLVLKAYINKLEEEQQQG 228

BLAST of Spo16436.1 vs. NCBI nr
Match: gi|802540314|ref|XP_012075838.1| (PREDICTED: 50S ribosomal protein L10, chloroplastic [Jatropha curcas])

HSP 1 Score: 298.5 bits (763), Expect = 1.000e-77
Identity = 154/232 (66.38%), Postives = 186/232 (80.17%), Query Frame = 1

		  

Query: 7   LSKPLPTTIKTTTHSLSSVYPNPFKP-------NNLTFPRTTHKHPTT---TTITAAISR 66
           LS  + TT++TT  S  S  P+P +        N  +F +  HK PT+    +I +AISR
Sbjct: 22  LSPSITTTMETTLFSFPSSKPSPSQTLIQFRSTNPFSFSKPLHK-PTSYRPISINSAISR 81

Query: 67  TKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQD 126
           TKKEETVETV+  LENCYLLAAI Y GFTVKQFQ+LR++LPE++ LIVAKNTLV KA++ 
Sbjct: 82  TKKEETVETVKTQLENCYLLAAIKYTGFTVKQFQELRRSLPESSKLIVAKNTLVYKAIEG 141

Query: 127 TQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEV 186
           TQW A+KPCMKGMNAWLFVH+EEIP AIKPYR FQKE+KLEDNDFTGA FEGKFYGPG+ 
Sbjct: 142 TQWEALKPCMKGMNAWLFVHTEEIPEAIKPYRNFQKEKKLEDNDFTGAVFEGKFYGPGDF 201

Query: 187 KRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDE 229
           K+LETMPS+AEI+AK+LG+L+SP   LV TLQAPARD++ +LKAY+KKLEDE
Sbjct: 202 KQLETMPSRAEIYAKMLGALQSPAMGLVSTLQAPARDVIMVLKAYVKKLEDE 252

BLAST of Spo16436.1 vs. NCBI nr
Match: gi|1009120791|ref|XP_015877114.1| (PREDICTED: 50S ribosomal protein L10, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 295.0 bits (754), Expect = 1.100e-76
Identity = 155/238 (65.13%), Postives = 184/238 (77.31%), Query Frame = 1

		  

Query: 1   MESTLFL----SKPLPT----TIKTTTHSLSSVYPNPFK--PNNLTFPRTTHKHPTTTTI 60
           ME+TLF     S+P P     T+   T+ L S  PNP +  P    FP          +I
Sbjct: 1   MEATLFSFPSSSRPSPLSQTLTLSRPTNPLLSFTPNPTRINPQPRRFP----------SI 60

Query: 61  TAAISRTKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLV 120
            +AISRTKKE+TVETV+K+LENCYL+A I YKGFTVKQFQDLR++LPENT LIVAKNTLV
Sbjct: 61  RSAISRTKKEQTVETVKKNLENCYLIAGIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLV 120

Query: 121 EKAVQDTQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKF 180
            KA++ TQW  +KPCM GMNAWLFVHSEEIP AIKPYR FQKERKL++NDFTGA FEGKF
Sbjct: 121 YKAIEGTQWEVLKPCMTGMNAWLFVHSEEIPAAIKPYRQFQKERKLDENDFTGAVFEGKF 180

Query: 181 YGPGEVKRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDE 229
           YGPG+ K+LE+MP++AEI+AKLLG L++P   LVGTLQAPARDLV LL+AY+ KLE+E
Sbjct: 181 YGPGDFKQLESMPTRAEIYAKLLGQLQTPALNLVGTLQAPARDLVMLLRAYVNKLEEE 228

BLAST of Spo16436.1 vs. NCBI nr
Match: gi|595797363|ref|XP_007201264.1| (hypothetical protein PRUPE_ppa010824mg [Prunus persica])

HSP 1 Score: 293.9 bits (751), Expect = 2.500e-76
Identity = 154/236 (65.25%), Postives = 185/236 (78.39%), Query Frame = 1

		  

Query: 1   MESTLFL----SKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISR 60
           ME+TLF       P P+  +T + +L +   NPF   +LT PR T  H    TI +AISR
Sbjct: 1   MEATLFSFPSSKPPSPSLTQTQSKTLLTRPTNPFL--SLT-PRPTRHHHRLPTIRSAISR 60

Query: 61  TKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQD 120
           TKKE+TVET++++LENC+LLA I YKG TVKQFQDLRK LPE T LIVAKNTLV KA++ 
Sbjct: 61  TKKEQTVETIKENLENCHLLAGIKYKGLTVKQFQDLRKVLPETTKLIVAKNTLVYKAIEG 120

Query: 121 TQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEV 180
           T W A+KPCM GMNAWLFVHSEEIP AIKPYR FQKE+KL+ NDFTGA FEGKFY PG+ 
Sbjct: 121 TPWEALKPCMTGMNAWLFVHSEEIPPAIKPYRDFQKEKKLDSNDFTGAVFEGKFYAPGDF 180

Query: 181 KRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG 233
           K+LETMP++AEI+AKLLG+L SP S+LVGT+QAPAR+LV LLKAY++KLE+E   G
Sbjct: 181 KQLETMPTRAEIYAKLLGTLNSPASSLVGTIQAPARELVMLLKAYVQKLEEESGGG 233

BLAST of Spo16436.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3N5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_110360 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 2.800e-127
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1

		  

Query: 1   MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISRTKKE 60
           MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISRTKKE
Sbjct: 1   MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISRTKKE 60

Query: 61  ETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWA 120
           ETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWA
Sbjct: 61  ETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWA 120

Query: 121 AIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLE 180
           AIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLE
Sbjct: 121 AIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLE 180

Query: 181 TMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG 233
           TMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG
Sbjct: 181 TMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG 232

BLAST of Spo16436.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E862_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g045880 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.400e-96
Identity = 184/233 (78.97%), Postives = 206/233 (88.41%), Query Frame = 1

		  

Query: 1   MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTT-TITAAISRTKK 60
           ME+TLFLSKPLP T    +HSL+S +PNP K   L F  TTHK PT+  TITAAISRTKK
Sbjct: 1   METTLFLSKPLPPT--KLSHSLTSSFPNPHK---LAFFPTTHKKPTSNFTITAAISRTKK 60

Query: 61  EETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQW 120
           EETVETV+ HLENCYL+AAINYKGFTVKQFQ+LRKALPE T L+VAKNTLVEKAV++TQW
Sbjct: 61  EETVETVKSHLENCYLVAAINYKGFTVKQFQELRKALPETTKLVVAKNTLVEKAVENTQW 120

Query: 121 AAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRL 180
            AIKPCMKGMNAWLFVH+EEIP A+KPYRTFQKE+KLEDNDFTGACFEGKFYGP + K L
Sbjct: 121 EAIKPCMKGMNAWLFVHTEEIPGALKPYRTFQKEKKLEDNDFTGACFEGKFYGPEDFKGL 180

Query: 181 ETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG 233
           ETMPS+A+++AKLLGSLK+PG ALVGTLQAPARDLV +LKAYI KLE+EQQQG
Sbjct: 181 ETMPSRADVYAKLLGSLKTPGIALVGTLQAPARDLVLVLKAYINKLEEEQQQG 228

BLAST of Spo16436.1 vs. UniProtKB/TrEMBL
Match: A0A067LF88_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15458 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.000e-78
Identity = 154/232 (66.38%), Postives = 186/232 (80.17%), Query Frame = 1

		  

Query: 7   LSKPLPTTIKTTTHSLSSVYPNPFKP-------NNLTFPRTTHKHPTT---TTITAAISR 66
           LS  + TT++TT  S  S  P+P +        N  +F +  HK PT+    +I +AISR
Sbjct: 22  LSPSITTTMETTLFSFPSSKPSPSQTLIQFRSTNPFSFSKPLHK-PTSYRPISINSAISR 81

Query: 67  TKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQD 126
           TKKEETVETV+  LENCYLLAAI Y GFTVKQFQ+LR++LPE++ LIVAKNTLV KA++ 
Sbjct: 82  TKKEETVETVKTQLENCYLLAAIKYTGFTVKQFQELRRSLPESSKLIVAKNTLVYKAIEG 141

Query: 127 TQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEV 186
           TQW A+KPCMKGMNAWLFVH+EEIP AIKPYR FQKE+KLEDNDFTGA FEGKFYGPG+ 
Sbjct: 142 TQWEALKPCMKGMNAWLFVHTEEIPEAIKPYRNFQKEKKLEDNDFTGAVFEGKFYGPGDF 201

Query: 187 KRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDE 229
           K+LETMPS+AEI+AK+LG+L+SP   LV TLQAPARD++ +LKAY+KKLEDE
Sbjct: 202 KQLETMPSRAEIYAKMLGALQSPAMGLVSTLQAPARDVIMVLKAYVKKLEDE 252

BLAST of Spo16436.1 vs. UniProtKB/TrEMBL
Match: M5VZQ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010824mg PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.700e-76
Identity = 154/236 (65.25%), Postives = 185/236 (78.39%), Query Frame = 1

		  

Query: 1   MESTLFL----SKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISR 60
           ME+TLF       P P+  +T + +L +   NPF   +LT PR T  H    TI +AISR
Sbjct: 1   MEATLFSFPSSKPPSPSLTQTQSKTLLTRPTNPFL--SLT-PRPTRHHHRLPTIRSAISR 60

Query: 61  TKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQD 120
           TKKE+TVET++++LENC+LLA I YKG TVKQFQDLRK LPE T LIVAKNTLV KA++ 
Sbjct: 61  TKKEQTVETIKENLENCHLLAGIKYKGLTVKQFQDLRKVLPETTKLIVAKNTLVYKAIEG 120

Query: 121 TQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEV 180
           T W A+KPCM GMNAWLFVHSEEIP AIKPYR FQKE+KL+ NDFTGA FEGKFY PG+ 
Sbjct: 121 TPWEALKPCMTGMNAWLFVHSEEIPPAIKPYRDFQKEKKLDSNDFTGAVFEGKFYAPGDF 180

Query: 181 KRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG 233
           K+LETMP++AEI+AKLLG+L SP S+LVGT+QAPAR+LV LLKAY++KLE+E   G
Sbjct: 181 KQLETMPTRAEIYAKLLGTLNSPASSLVGTIQAPARELVMLLKAYVQKLEEESGGG 233

BLAST of Spo16436.1 vs. UniProtKB/TrEMBL
Match: B9RY97_RICCO (50S ribosomal protein L10, putative OS=Ricinus communis GN=RCOM_0811410 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.000e-76
Identity = 155/232 (66.81%), Postives = 183/232 (78.88%), Query Frame = 1

		  

Query: 1   MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTTTITAAISRTKKE 60
           ME+TL LS P   T    T +    + NPF P + +F + T   P +  I +AISRTKKE
Sbjct: 1   METTL-LSFPSSKTSPCQTLTQFRSFRNPF-PLSKSFRKPTSYKPIS--INSAISRTKKE 60

Query: 61  ETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWA 120
           ETVETV+  LENCYLLAAI Y GFTVKQFQDLR+ALPE+T LIVAKNTLV KA++ T W 
Sbjct: 61  ETVETVKTQLENCYLLAAIKYTGFTVKQFQDLRRALPESTRLIVAKNTLVFKAIEGTPWE 120

Query: 121 AIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLE 180
           A+KPCMKGMNAWLFVHSEEIP A+KPYRTFQK++KLE NDFTGA FEGKFYGP + K+LE
Sbjct: 121 ALKPCMKGMNAWLFVHSEEIPEALKPYRTFQKDKKLESNDFTGAVFEGKFYGPDDFKQLE 180

Query: 181 TMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDEQQQG 233
           TMPS+AEI+AK+LG+L+SP   LV TLQAPARD++ +LKAY+KKLEDE   G
Sbjct: 181 TMPSRAEIYAKILGALQSPSIGLVSTLQAPARDVIMVLKAYVKKLEDESGGG 228

BLAST of Spo16436.1 vs. ExPASy Swiss-Prot
Match: RK10_TOBAC (50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.000e-77
Identity = 150/230 (65.22%), Postives = 181/230 (78.70%), Query Frame = 1

		  

Query: 1   MESTLFLSKPLPTTIKTTTHSLSSVYPNPFKPNNLTFPRTTHKHPTTT--TITAAISRTK 60
           ME+T F      T   +T+HS      + F  N+LT P   H  P +   TI +AISRTK
Sbjct: 1   MEATFF------TLPSSTSHSYPFSLKSHFN-NSLTLPTHPHFKPKSKNLTIRSAISRTK 60

Query: 61  KEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQ 120
           KEETVETV++ LE+CYLLA I YKG TVKQFQ+LR  LP+ T L+VAKNTLV KA++ T+
Sbjct: 61  KEETVETVKQQLEDCYLLAGIGYKGLTVKQFQELRSQLPDTTKLLVAKNTLVLKAIEGTK 120

Query: 121 WAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKR 180
           W A+KPCMKGMNAWLFVHSEEIP A+KPYRTFQKE+KLE+NDFTGA FEGKFYGP E K 
Sbjct: 121 WEALKPCMKGMNAWLFVHSEEIPAALKPYRTFQKEKKLEENDFTGAVFEGKFYGPEEFKA 180

Query: 181 LETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDE 229
           LET+P++AEI+A+LLGSLK P SA+VGT+QAPAR+LV +LKAY+KKLE+E
Sbjct: 181 LETLPTRAEIYAQLLGSLKGPASAVVGTIQAPARNLVMVLKAYVKKLEEE 223

BLAST of Spo16436.1 vs. ExPASy Swiss-Prot
Match: RK10_ARATH (50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana GN=RPL10 PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.400e-71
Identity = 131/193 (67.88%), Postives = 160/193 (82.90%), Query Frame = 1

		  

Query: 38  PRTTHK--HPTTTTITAAISRTKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKA 97
           P+T++   +P    I +A+SR KKEETVE V+ HLENC+LLAAINYKG TVKQFQDLR+ 
Sbjct: 25  PKTSNSPNYPRLPVIRSAVSRNKKEETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRT 84

Query: 98  LPENTTLIVAKNTLVEKAVQDTQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERK 157
           LP+ T LIVAKNTLV KA++ T+W A+KPCMKGMNAWLFV ++EIP AIKPYR+FQKERK
Sbjct: 85  LPDTTKLIVAKNTLVFKAIEGTKWEALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERK 144

Query: 158 LEDNDFTGACFEGKFYGPGEVKRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLV 217
           LE+NDF GA FEGKFY P   K LETMP++AE++AK+LG+L+SP   LV TLQAPAR+++
Sbjct: 145 LENNDFAGAVFEGKFYAPDNFKVLETMPTRAEVYAKMLGALQSPAINLVTTLQAPAREVI 204

Query: 218 FLLKAYIKKLEDE 229
            +L AYIKKLEDE
Sbjct: 205 MVLMAYIKKLEDE 217

BLAST of Spo16436.1 vs. ExPASy Swiss-Prot
Match: RL10_THEP1 (50S ribosomal protein L10 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rplJ PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.300e-16
Identity = 54/175 (30.86%), Postives = 93/175 (53.14%), Query Frame = 1

		  

Query: 54  ISRTKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPEN----TTLIVAKNTL 113
           ++R +KE  VE + +  +   L+   ++ GFTV    +LR  L E         V KNTL
Sbjct: 2   LTRQQKELIVEEMSEIFKKTSLILFADFLGFTVADLTELRSKLREKYGDGARFRVVKNTL 61

Query: 114 VEKAVQDTQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGK 173
           +  A+++ ++   +  +KG  A L+V   +   A+K    F K++K + +   G   EGK
Sbjct: 62  LNLALKNAEYEGYEEFLKGPTAVLYVTEGDPVEAVKIVYNFYKDKKADLSRLKGGFLEGK 121

Query: 174 FYGPGEVKRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKK 225
            +   EV+ +  +PSK E++A L+G +K+P + LV  L    R+LV++L A  +K
Sbjct: 122 KFTAEEVENIAKLPSKEELYAMLVGRVKAPITGLVFVLSGILRNLVYVLNAIKEK 176

BLAST of Spo16436.1 vs. ExPASy Swiss-Prot
Match: RL10_THESQ (50S ribosomal protein L10 OS=Thermotoga sp. (strain RQ2) GN=rplJ PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.300e-16
Identity = 54/175 (30.86%), Postives = 93/175 (53.14%), Query Frame = 1

		  

Query: 54  ISRTKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPEN----TTLIVAKNTL 113
           ++R +KE  VE + +  +   L+   ++ GFTV    +LR  L E         V KNTL
Sbjct: 2   LTRQQKELIVEEMSEIFKKTSLILFADFLGFTVADLTELRSKLREKYGDGARFRVVKNTL 61

Query: 114 VEKAVQDTQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGK 173
           +  A+++ ++   +  +KG  A L+V   +   A+K    F K++K + +   G   EGK
Sbjct: 62  LNLALKNAEYEGYEEFLKGPTAVLYVTEGDPVEAVKIVYNFYKDKKADLSRLKGGFLEGK 121

Query: 174 FYGPGEVKRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKK 225
            +   EV+ +  +PSK E++A L+G +K+P + LV  L    R+LV++L A  +K
Sbjct: 122 KFTAEEVENIAKLPSKEELYAMLVGRVKAPITGLVFVLSGILRNLVYVLNAIKEK 176

BLAST of Spo16436.1 vs. ExPASy Swiss-Prot
Match: RL10_PROMP (50S ribosomal protein L10 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplJ PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.300e-16
Identity = 48/170 (28.24%), Postives = 93/170 (54.71%), Query Frame = 1

		  

Query: 59  KEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLI-VAKNTLVEKAVQ-D 118
           K++ V  ++  L++  +   ++YKG T+K+  DLR  L  N  +  V KN+L+ KA+  +
Sbjct: 8   KQKIVTEIKSLLDDSEMAVVLDYKGLTIKEMSDLRSRLQTNNGICKVTKNSLMRKAIDGN 67

Query: 119 TQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEV 178
           + W  ++  + G NA++ +  E++  A+K  ++FQKE K  +    GA FEG+     E+
Sbjct: 68  SNWTDLESLLTGTNAFVLI-KEDVGGAVKAIQSFQKETKKSETK--GALFEGRLLSESEI 127

Query: 179 KRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLE 227
           K + ++PS+  + AK+ G+L    + +  ++      +   LK + +K E
Sbjct: 128 KEIASLPSREVLMAKIAGALNGVATKIAISINEVPSGIARSLKQHSEKSE 174

BLAST of Spo16436.1 vs. TAIR (Arabidopsis)
Match: AT5G13510.1 (Ribosomal protein L10 family protein)

HSP 1 Score: 270.0 bits (689), Expect = 1.300e-72
Identity = 131/193 (67.88%), Postives = 160/193 (82.90%), Query Frame = 1

		  

Query: 38  PRTTHK--HPTTTTITAAISRTKKEETVETVQKHLENCYLLAAINYKGFTVKQFQDLRKA 97
           P+T++   +P    I +A+SR KKEETVE V+ HLENC+LLAAINYKG TVKQFQDLR+ 
Sbjct: 25  PKTSNSPNYPRLPVIRSAVSRNKKEETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRT 84

Query: 98  LPENTTLIVAKNTLVEKAVQDTQWAAIKPCMKGMNAWLFVHSEEIPIAIKPYRTFQKERK 157
           LP+ T LIVAKNTLV KA++ T+W A+KPCMKGMNAWLFV ++EIP AIKPYR+FQKERK
Sbjct: 85  LPDTTKLIVAKNTLVFKAIEGTKWEALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERK 144

Query: 158 LEDNDFTGACFEGKFYGPGEVKRLETMPSKAEIFAKLLGSLKSPGSALVGTLQAPARDLV 217
           LE+NDF GA FEGKFY P   K LETMP++AE++AK+LG+L+SP   LV TLQAPAR+++
Sbjct: 145 LENNDFAGAVFEGKFYAPDNFKVLETMPTRAEVYAKMLGALQSPAINLVTTLQAPAREVI 204

Query: 218 FLLKAYIKKLEDE 229
            +L AYIKKLEDE
Sbjct: 205 MVLMAYIKKLEDE 217

BLAST of Spo16436.1 vs. TAIR (Arabidopsis)
Match: AT3G12370.1 (Ribosomal protein L10 family protein)

HSP 1 Score: 171.8 bits (434), Expect = 5.000e-43
Identity = 82/144 (56.94%), Postives = 105/144 (72.92%), Query Frame = 1

		  

Query: 69  HLENCYLLAAINYKGFTVKQFQDLRKALPENTT--LIVAKNTLVEKAVQDTQWAAIKPCM 128
           +LENC+ +  INY G +VKQ Q+LR  L ENT   L+VAKNTLV KA++ T+W ++KPCM
Sbjct: 17  NLENCHFITGINYNGLSVKQLQELRGILRENTNTKLLVAKNTLVYKALEGTKWESLKPCM 76

Query: 129 KGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLETMPSKA 188
           KGMNAWLFV SE+IP A+K +  FQKE+KL DN+  GA FE K Y P + K +ETMPS+A
Sbjct: 77  KGMNAWLFVQSEDIPAALKTFINFQKEKKLYDNNLGGAVFEEKLYAPQDYKVIETMPSRA 136

Query: 189 EIFAKLLGSLKSPGSALVGTLQAP 211
           +++  +LGSL  P   LV  LQAP
Sbjct: 137 DVYGMMLGSLHWPALDLVNALQAP 160

The following BLAST results are available for this feature:
BLAST of Spo16436.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902201840|gb|KNA14105.1|4.0e-127100.hypothetical protein SOVF_1103... [more]
gi|731362825|ref|XP_010693095.1|6.3e-9678.9PREDICTED: 50S ribosomal prote... [more]
gi|802540314|ref|XP_012075838.1|1.0e-7766.3PREDICTED: 50S ribosomal prote... [more]
gi|1009120791|ref|XP_015877114.1|1.1e-7665.1PREDICTED: 50S ribosomal prote... [more]
gi|595797363|ref|XP_007201264.1|2.5e-7665.2hypothetical protein PRUPE_ppa... [more]
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BLAST of Spo16436.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R3N5_SPIOL2.8e-127100.Uncharacterized protein OS=Spi... [more]
A0A0J8E862_BETVU4.4e-9678.9Uncharacterized protein OS=Bet... [more]
A0A067LF88_JATCU7.0e-7866.3Uncharacterized protein OS=Jat... [more]
M5VZQ9_PRUPE1.7e-7665.2Uncharacterized protein OS=Pru... [more]
B9RY97_RICCO5.0e-7666.850S ribosomal protein L10, put... [more]
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BLAST of Spo16436.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RK10_TOBAC5.0e-7765.250S ribosomal protein L10, chl... [more]
RK10_ARATH2.4e-7167.850S ribosomal protein L10, chl... [more]
RL10_THEP11.3e-1630.850S ribosomal protein L10 OS=T... [more]
RL10_THESQ1.3e-1630.850S ribosomal protein L10 OS=T... [more]
RL10_PROMP1.3e-1628.250S ribosomal protein L10 OS=P... [more]
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BLAST of Spo16436.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G13510.11.3e-7267.8Ribosomal protein L10 family p... [more]
AT3G12370.15.0e-4356.9Ribosomal protein L10 family p... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 56..145
score: 3.4
IPR022973Ribosomal protein L10HAMAPMF_00362Ribosomal_L10coord: 54..214
score: 18
NoneNo IPR availablePANTHERPTHR11560FAMILY NOT NAMEDcoord: 49..231
score: 1.5
NoneNo IPR availableunknownSSF160369Ribosomal protein L10-likecoord: 56..224
score: 3.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006914 autophagy
biological_process GO:0019872 streptomycin biosynthetic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0046854 phosphatidylinositol phosphorylation
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006021 inositol biosynthetic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0048481 plant ovule development
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009308 amine metabolic process
biological_process GO:0006412 translation
biological_process GO:0010015 root morphogenesis
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0009407 toxin catabolic process
biological_process GO:0009636 response to toxic substance
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0010731 protein glutathionylation
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0005986 sucrose biosynthetic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006479 protein methylation
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006000 fructose metabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015976 carbon utilization
biological_process GO:0006289 nucleotide-excision repair
biological_process GO:0006306 DNA methylation
biological_process GO:0000737 DNA catabolic process, endonucleolytic
biological_process GO:0006285 base-excision repair, AP site formation
biological_process GO:0010155 regulation of proton transport
biological_process GO:0008361 regulation of cell size
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0006364 rRNA processing
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0000165 MAPK cascade
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0007389 pattern specification process
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009409 response to cold
biological_process GO:0006508 proteolysis
biological_process GO:0010200 response to chitin
biological_process GO:0009853 photorespiration
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009657 plastid organization
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0009926 auxin polar transport
biological_process GO:0048653 anther development
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0050832 defense response to fungus
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0006754 ATP biosynthetic process
biological_process GO:0006007 glucose catabolic process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0016020 membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005829 cytosol
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0048046 apoplast
molecular_function GO:0019843 rRNA binding
molecular_function GO:0045174 glutathione dehydrogenase (ascorbate) activity
molecular_function GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity
molecular_function GO:0050278 sedoheptulose-bisphosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0004427 inorganic diphosphatase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008934 inositol monophosphate 1-phosphatase activity
molecular_function GO:0052832 inositol monophosphate 3-phosphatase activity
molecular_function GO:0052833 inositol monophosphate 4-phosphatase activity
molecular_function GO:0046406 magnesium protoporphyrin IX methyltransferase activity
molecular_function GO:0008276 protein methyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004364 glutathione transferase activity
RNA-Seq Expression