Spo16469 (gene)

Overview
NameSpo16469
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRNA polymerase sigma factor
Locationchr2 : 39557284 .. 39561093 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGCATAAGAAAGTGAATATCAAAGGGGTGAGTTTTTGTCATTTGTGGTATTCGCTCCTAGCATTCCCTCTCCGATTTTCCTTATCCAGTCTCTTTCTCTCTCCTCCCCACTCAACTTCTGAGCATTTATCTATGCAATCCACCGCCATTAGAACTGATACATAGAGAAGGAAGGAAGAAGATGACATGTTTATTGCCGCAGTTCAAATGTCAACCTGACACTTTCTCCATTTCTTCCGTTCTTCATCCTCCTTCTGCATCTTCTTCTGCTACTTCCCTCTGTATGTAATTCTAAATTCCTCTTTTTTCTTCTCTCTTTAATTTTCCTAATTGGGTTTATCTTAATTACCCATATCAGTAATTATGCTTAAATTTTGGAGCTTTTATAATTAAATCAATCTTTATTATTAGTAGAATGAGTTCATGTGAAATTGTAGGCTGATTAATGTATAAATTTGATTAATTTGATTATTGCCCATTTCAAGCATTTATCTATTGTTAATTCTAGGATTTTAATAGTTTCAATTTAGCTTAATTTCGGCTGTTTTCATCCTTTTTTGAGGTTAATGTGGTGTATGATTGTGTCCCACTAATTTTAATATTCTGTTATTGAGGAAAAGGAGAGAAACAATTGTGTTTTTGAATGCGTTTTTATGTGAATTTGGCAGTGAGAAATAGAGATTTGGTCTGTTTTCGCCCACAATGTGCGGTGTCTACTCCACCACCACCCACAGCAGCAGCAGAAACTTCCATATTTGATGTAGAGAAGCTGCGTTTGCCTTATGTTGAATCTAATTCCAATTCACTTTCTGCATTCGCACAATCGACTTTTTTGAGCACTTTGGGTTCTCCAGCTGAGGTCAGAACTCGTTATCTTTGAGACTAATTGTGTGTTTGAATGATAGAAGGCGAGGGGAGGGAGAGTCATTGATCTATATCCGCGTGTTTGGGTGTTGGTTGGCTAAGGGGAGGGAAGGGAAGGGGATGTCAGATTCATATGCATTCAATGTGAAGTAAATTTAATTCTTTCAAAGACAGAAATGATTTGGAAGGAAATTGCACACCTATTCCTCTCGTCCCCTCTCCTCCCTTTGTAGACTGATTGATATCCAAATATAATGTGATTTATGTTGTGGCATTATCTAGTTATTCCTAACTGAATTCAGTCTAAGATTTTGTAGTTTTTGGCTTTATTGGAACACTTTGTGTCATTATGTTTCCAGTCTTTTCATCTTTTGGTTGCATTCACTTATCTCGTTGGGTTATTCGGATAGCTGGTGTGTTTTTTTTTTTTTAATAAAGAAAAGGGAATTGGAAACAAATGATGAATGCTGAGAGTCATAATGTCATACACGCATTGACGAAGTTTAGACATGTTCACTGATGTTGAAGCAGTGTCACTCAGCAATATTTTATCCGCGTGTCTGAGAATCAGTCATGAAGACTTTGGATTAGGATAAGAGTCTGAGTAAAAGTAGGGTGCAACTATGCAAGATATGAATAATGATGATTTGTGCGTAGGAAAATGTTTTTGCATCCGACAGCTGGGTTGTTTAAAAGCGACTTTTAGAAGACGCTTTTAATCAGTGTACCATTTTACTTGTTTATCCTCAGGTCAAGTTTGATACTGCGTTGACAGCAAAGTTACTGATCGAAAATGAAGAAGCTGTTATTGCTGCTGCTGCTGCCGAAGCAGTTGCCTTGGCAAGGGCAGCAGCCAAGCTTGCAAAGGATGCCGCACTTATGGCCTTTAATAGTCAGCCAACAAAGCCAGTGTCTAAACTTGAAGGTCAATCACTTCATTTTAGTGGTGCTCAACTTTTAGAAAATGAACAAGTAGGGAGTATGAGAAACTTTGAGGGGTCTGAGAATTCTCTTAGAGAAGGTGACACGGTTTCTGAACCTGCTGACATGGAGCCTACAATCGAGGAGCTTCAACTCCTGGAAGTAGAACTTGATGAGAGTATAACTGTTAGGTCGACACGCCAAGGAGAGAGAAAGGCCAGGAGAGCAAGGGCTGCAGAGAAGGTTGCATCTAATGTTGTTTCTGTTAAGGTAGGGTCTAATAGCCGCAAAAAGCGCACATCCGTGCAAGAAGTGGACTATTCTGATCCATTGCGTTACTTAAGAGGAGCCACCAACTCCTCTAGGCTTCTTACTTCTTCTGAAGAGACAGAATTGTCAGCCGGAATCCAGGTATGTCTAAGCTTTTTATTCTGAATGTGATGTGGTCTGCATTTTCTGTTAGAGAGAAAATGGAGAGGGAGTTGTCAGTGCAATTAAGATGAACTTAAAAACTACTTCACCTACACCCCAGCTTGTTTTTTTGGCCCCTTCGCAGCTTTGGCCCTTAGGCGTCCTGTCAAAAGATATTCAGAGCCAGCCCTATGTCTAAACTCTAAAGTCCGTATCAGTCAAGGACATTGTGACTTGTGTATGCAGTATACAACTCAAATTTCTCGTTCTCTGTTAATGACCTAAATCAATGTTTAAATCTGTGTTGAGTACTTGTGTATTCAAAGCCAACATCAAATGGTTGTAAGAGCACAAGACATCTCTCAGTTCTCGTGTTTGGCTTTATAAACTGAAATCAGTAGTTAACAACTATTGCAGGACTTGCTCAAACTAGAAAAACTGCATGACGAACTGAAAGTAAGATTTGGGGAAGAGCCGTCCTTTGTGCAGTGGGCTGCCGCAGCAGGTATTGATCAGAGAACTCTAAGGAGGCGTCTAAACCATGGTACTTTCTGCAAAGATAAAATGATCAAAAGCAACGTAAGGCTTGTGATATCGATTGCCAAAAATTATCAGGGATCTGGAATGAATCTTCAAGATCTTGTTCAGGTTTTTGCCTTCTTGTCACCTATTATGAACCAAATTTGCGCAAGATTATTCCTGGATTTCCCACCTTGCTATTGCATATAACCTGTCATTGTAAATTTATGAACTTGTAGGAAGGATGTAGAGGTCTTGTTAGAGGAGCAGAAAAGTTTGATGCCTCCAAAGGTTTTAAGTTCTCAACTTATGCTCACTGGTGGATAAAACAGGCAGTTCGAAAATCCCTTTCCGACCAGTCAAGGACAATCCGCCTTCCAGTAAGTCTTCTTTCTCCTTCCATCCCTCATTAAAAGATGATTCTTGGTTGTATCAGGAGTGGCGGGAGTATTAACTAACGTGACTTCCATCTTACACGTTCAAGAAATAAGTTTTTCCAACCAATGCTTTGATTGTTAATGCAGTTTCACATGGTTGAGGCAACTTATAGAGTAAAAGAGGCTAGAAAACAGCTGTTAAGTGAAAATGGAAAACAACCCAATAATGAGGAAGTTGCAGAGGCTACAGGACTGTCAATGAAAAGGCTAACTGCTGTACTAATGACTCCTAAGGCTCCAAGGTCTTTAGACCAGAAGATCGGATTCAATATGAATCTTAAACCTTCGGTATGCATCTTTACTCCATCTAATCATACGATTCTATTCTTTTATATATTCCTTGTTCTCATGGCTCATTGTGGTTTCCCCCTTCAGGAAGTAATAGCTGACCCTGAAGCAGAAACTGCTGAAGATTTGTTAACTAAACAGTTCATGAGGCAAGATCTCGAGAAGGTTCTAGATACATTGAGTTCAAGAGAAAAGCAGGTGATAAGATGGAGGTTTGGATTGGAAGATGGAAGAATGAAAACACTACAAGAGATTGGTGAGTTGATGGGTGTCAGTAGGGAAAGGATTAGGCAAATTGAATCGTCTGCGTTTAGGAAGCTGCAGAATAAGAAGAAAACCATTAATTTGCAACAATACATGTTCTTATAA

mRNA sequence

AGGGCATAAGAAAGTGAATATCAAAGGGGTGAGTTTTTGTCATTTGTGGTATTCGCTCCTAGCATTCCCTCTCCGATTTTCCTTATCCAGTCTCTTTCTCTCTCCTCCCCACTCAACTTCTGAGCATTTATCTATGCAATCCACCGCCATTAGAACTGATACATAGAGAAGGAAGGAAGAAGATGACATGTTTATTGCCGCAGTTCAAATGTCAACCTGACACTTTCTCCATTTCTTCCGTTCTTCATCCTCCTTCTGCATCTTCTTCTGCTACTTCCCTCTTGAGAAATAGAGATTTGGTCTGTTTTCGCCCACAATGTGCGGTGTCTACTCCACCACCACCCACAGCAGCAGCAGAAACTTCCATATTTGATGTAGAGAAGCTGCGTTTGCCTTATGTTGAATCTAATTCCAATTCACTTTCTGCATTCGCACAATCGACTTTTTTGAGCACTTTGGGTTCTCCAGCTGAGGTCAAGTTTGATACTGCGTTGACAGCAAAGTTACTGATCGAAAATGAAGAAGCTGTTATTGCTGCTGCTGCTGCCGAAGCAGTTGCCTTGGCAAGGGCAGCAGCCAAGCTTGCAAAGGATGCCGCACTTATGGCCTTTAATAGTCAGCCAACAAAGCCAGTGTCTAAACTTGAAGGTCAATCACTTCATTTTAGTGGTGCTCAACTTTTAGAAAATGAACAAGTAGGGAGTATGAGAAACTTTGAGGGGTCTGAGAATTCTCTTAGAGAAGGTGACACGGTTTCTGAACCTGCTGACATGGAGCCTACAATCGAGGAGCTTCAACTCCTGGAAGTAGAACTTGATGAGAGTATAACTGTTAGGTCGACACGCCAAGGAGAGAGAAAGGCCAGGAGAGCAAGGGCTGCAGAGAAGGTTGCATCTAATGTTGTTTCTGTTAAGGTAGGGTCTAATAGCCGCAAAAAGCGCACATCCGTGCAAGAAGTGGACTATTCTGATCCATTGCGTTACTTAAGAGGAGCCACCAACTCCTCTAGGCTTCTTACTTCTTCTGAAGAGACAGAATTGTCAGCCGGAATCCAGGACTTGCTCAAACTAGAAAAACTGCATGACGAACTGAAAGTAAGATTTGGGGAAGAGCCGTCCTTTGTGCAGTGGGCTGCCGCAGCAGGTATTGATCAGAGAACTCTAAGGAGGCGTCTAAACCATGGTACTTTCTGCAAAGATAAAATGATCAAAAGCAACGTAAGGCTTGTGATATCGATTGCCAAAAATTATCAGGGATCTGGAATGAATCTTCAAGATCTTGTTCAGGAAGGATGTAGAGGTCTTGTTAGAGGAGCAGAAAAGTTTGATGCCTCCAAAGGTTTTAAGTTCTCAACTTATGCTCACTGGTGGATAAAACAGGCAGTTCGAAAATCCCTTTCCGACCAGTCAAGGACAATCCGCCTTCCATTTCACATGGTTGAGGCAACTTATAGAGTAAAAGAGGCTAGAAAACAGCTGTTAAGTGAAAATGGAAAACAACCCAATAATGAGGAAGTTGCAGAGGCTACAGGACTGTCAATGAAAAGGCTAACTGCTGTACTAATGACTCCTAAGGCTCCAAGGTCTTTAGACCAGAAGATCGGATTCAATATGAATCTTAAACCTTCGGAAGTAATAGCTGACCCTGAAGCAGAAACTGCTGAAGATTTGTTAACTAAACAGTTCATGAGGCAAGATCTCGAGAAGGTTCTAGATACATTGAGTTCAAGAGAAAAGCAGGTGATAAGATGGAGGTTTGGATTGGAAGATGGAAGAATGAAAACACTACAAGAGATTGGTGAGTTGATGGGTGTCAGTAGGGAAAGGATTAGGCAAATTGAATCGTCTGCGTTTAGGAAGCTGCAGAATAAGAAGAAAACCATTAATTTGCAACAATACATGTTCTTATAA

Coding sequence (CDS)

ATGACATGTTTATTGCCGCAGTTCAAATGTCAACCTGACACTTTCTCCATTTCTTCCGTTCTTCATCCTCCTTCTGCATCTTCTTCTGCTACTTCCCTCTTGAGAAATAGAGATTTGGTCTGTTTTCGCCCACAATGTGCGGTGTCTACTCCACCACCACCCACAGCAGCAGCAGAAACTTCCATATTTGATGTAGAGAAGCTGCGTTTGCCTTATGTTGAATCTAATTCCAATTCACTTTCTGCATTCGCACAATCGACTTTTTTGAGCACTTTGGGTTCTCCAGCTGAGGTCAAGTTTGATACTGCGTTGACAGCAAAGTTACTGATCGAAAATGAAGAAGCTGTTATTGCTGCTGCTGCTGCCGAAGCAGTTGCCTTGGCAAGGGCAGCAGCCAAGCTTGCAAAGGATGCCGCACTTATGGCCTTTAATAGTCAGCCAACAAAGCCAGTGTCTAAACTTGAAGGTCAATCACTTCATTTTAGTGGTGCTCAACTTTTAGAAAATGAACAAGTAGGGAGTATGAGAAACTTTGAGGGGTCTGAGAATTCTCTTAGAGAAGGTGACACGGTTTCTGAACCTGCTGACATGGAGCCTACAATCGAGGAGCTTCAACTCCTGGAAGTAGAACTTGATGAGAGTATAACTGTTAGGTCGACACGCCAAGGAGAGAGAAAGGCCAGGAGAGCAAGGGCTGCAGAGAAGGTTGCATCTAATGTTGTTTCTGTTAAGGTAGGGTCTAATAGCCGCAAAAAGCGCACATCCGTGCAAGAAGTGGACTATTCTGATCCATTGCGTTACTTAAGAGGAGCCACCAACTCCTCTAGGCTTCTTACTTCTTCTGAAGAGACAGAATTGTCAGCCGGAATCCAGGACTTGCTCAAACTAGAAAAACTGCATGACGAACTGAAAGTAAGATTTGGGGAAGAGCCGTCCTTTGTGCAGTGGGCTGCCGCAGCAGGTATTGATCAGAGAACTCTAAGGAGGCGTCTAAACCATGGTACTTTCTGCAAAGATAAAATGATCAAAAGCAACGTAAGGCTTGTGATATCGATTGCCAAAAATTATCAGGGATCTGGAATGAATCTTCAAGATCTTGTTCAGGAAGGATGTAGAGGTCTTGTTAGAGGAGCAGAAAAGTTTGATGCCTCCAAAGGTTTTAAGTTCTCAACTTATGCTCACTGGTGGATAAAACAGGCAGTTCGAAAATCCCTTTCCGACCAGTCAAGGACAATCCGCCTTCCATTTCACATGGTTGAGGCAACTTATAGAGTAAAAGAGGCTAGAAAACAGCTGTTAAGTGAAAATGGAAAACAACCCAATAATGAGGAAGTTGCAGAGGCTACAGGACTGTCAATGAAAAGGCTAACTGCTGTACTAATGACTCCTAAGGCTCCAAGGTCTTTAGACCAGAAGATCGGATTCAATATGAATCTTAAACCTTCGGAAGTAATAGCTGACCCTGAAGCAGAAACTGCTGAAGATTTGTTAACTAAACAGTTCATGAGGCAAGATCTCGAGAAGGTTCTAGATACATTGAGTTCAAGAGAAAAGCAGGTGATAAGATGGAGGTTTGGATTGGAAGATGGAAGAATGAAAACACTACAAGAGATTGGTGAGTTGATGGGTGTCAGTAGGGAAAGGATTAGGCAAATTGAATCGTCTGCGTTTAGGAAGCTGCAGAATAAGAAGAAAACCATTAATTTGCAACAATACATGTTCTTATAA

Protein sequence

MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAETSIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16469.1Spo16469.1mRNA


Homology
BLAST of Spo16469.1 vs. NCBI nr
Match: gi|902074113|gb|KNA03016.1| (hypothetical protein SOVF_213170, partial [Spinacia oleracea])

HSP 1 Score: 1079.3 bits (2790), Expect = 0.000e+0
Identity = 575/575 (100.00%), Postives = 575/575 (100.00%), Query Frame = 1

		  

Query: 1   MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60
           MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET
Sbjct: 31  MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 90

Query: 61  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 120
           SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA
Sbjct: 91  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 150

Query: 121 AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG 180
           AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG
Sbjct: 151 AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG 210

Query: 181 SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV 240
           SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV
Sbjct: 211 SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV 270

Query: 241 VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH 300
           VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH
Sbjct: 271 VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH 330

Query: 301 DELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG 360
           DELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG
Sbjct: 331 DELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG 390

Query: 361 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420
           MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
Sbjct: 391 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 450

Query: 421 ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK 480
           ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK
Sbjct: 451 ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK 510

Query: 481 PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE 540
           PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE
Sbjct: 511 PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE 570

Query: 541 LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL 576
           LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL
Sbjct: 571 LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL 605

BLAST of Spo16469.1 vs. NCBI nr
Match: gi|85813983|emb|CAD20831.2| (sigma factor [Spinacia oleracea])

HSP 1 Score: 1075.8 bits (2781), Expect = 0.000e+0
Identity = 573/575 (99.65%), Postives = 574/575 (99.83%), Query Frame = 1

		  

Query: 1   MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60
           MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET
Sbjct: 1   MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60

Query: 61  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 120
           SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA
Sbjct: 61  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 120

Query: 121 AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG 180
           AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG
Sbjct: 121 AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG 180

Query: 181 SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV 240
           SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV
Sbjct: 181 SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV 240

Query: 241 VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH 300
           VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH
Sbjct: 241 VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH 300

Query: 301 DELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG 360
           DELKVRFG+ PSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG
Sbjct: 301 DELKVRFGKSPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG 360

Query: 361 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420
           MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
Sbjct: 361 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420

Query: 421 ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK 480
           ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK
Sbjct: 421 ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK 480

Query: 481 PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE 540
           PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE
Sbjct: 481 PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE 540

Query: 541 LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL 576
           LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL
Sbjct: 541 LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL 575

BLAST of Spo16469.1 vs. NCBI nr
Match: gi|731348676|ref|XP_010685608.1| (PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 773.9 bits (1997), Expect = 2.000e-220
Identity = 421/486 (86.63%), Postives = 444/486 (91.36%), Query Frame = 1

		  

Query: 89  LSTLGSPAEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPT 148
           L  L   A+ KFDTAL A+LLIENEEAVIAAAAAEA+ALARAA KLAKDAALMA +SQP 
Sbjct: 103 LPELNDAAQTKFDTALAAELLIENEEAVIAAAAAEALALARAALKLAKDAALMAVSSQPI 162

Query: 149 KPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDTVSEPADMEPTIEELQLLE 208
           KP SK EGQSL   GAQ LE+EQ+GS+RN E +  SLRE    S P DMEPT EELQLLE
Sbjct: 163 KPESKPEGQSLFPDGAQRLESEQLGSVRNSEIAGTSLRE----SRPDDMEPTKEELQLLE 222

Query: 209 VELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYL 268
            EL ESITVRSTRQGERKARRARAA+K ASNVV++K+GSNSRKKRTSVQEVDYSDPLRYL
Sbjct: 223 AELAESITVRSTRQGERKARRARAADKAASNVVTLKLGSNSRKKRTSVQEVDYSDPLRYL 282

Query: 269 RGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLR 328
           RG T SSRLLTS+EE ELSAGIQDLLKLE+LH ELK RFG+EPSFVQWAAAAGIDQRTLR
Sbjct: 283 RGTTTSSRLLTSAEELELSAGIQDLLKLERLHKELKERFGDEPSFVQWAAAAGIDQRTLR 342

Query: 329 RRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK 388
           +RLNHG  CKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 343 KRLNHGIMCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK 402

Query: 389 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEA 448
           FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL SENG+QP+NEEVAEA
Sbjct: 403 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEA 462

Query: 449 TGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEK 508
           TGLSMKRLTAVLMTPKAPRSLDQK+G NMNLKPSEVIADPEAE+AEDLLTKQFMRQDLEK
Sbjct: 463 TGLSMKRLTAVLMTPKAPRSLDQKVGLNMNLKPSEVIADPEAESAEDLLTKQFMRQDLEK 522

Query: 509 VLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTIN 568
           VLDTLS REKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF+KLQNKK+  N
Sbjct: 523 VLDTLSPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFKKLQNKKRNKN 582

Query: 569 LQQYMF 575
           LQQY+F
Sbjct: 583 LQQYLF 584

BLAST of Spo16469.1 vs. NCBI nr
Match: gi|731348678|ref|XP_010685609.1| (PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 773.9 bits (1997), Expect = 2.000e-220
Identity = 421/486 (86.63%), Postives = 444/486 (91.36%), Query Frame = 1

		  

Query: 89  LSTLGSPAEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPT 148
           L  L   A+ KFDTAL A+LLIENEEAVIAAAAAEA+ALARAA KLAKDAALMA +SQP 
Sbjct: 102 LPELNDAAQTKFDTALAAELLIENEEAVIAAAAAEALALARAALKLAKDAALMAVSSQPI 161

Query: 149 KPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDTVSEPADMEPTIEELQLLE 208
           KP SK EGQSL   GAQ LE+EQ+GS+RN E +  SLRE    S P DMEPT EELQLLE
Sbjct: 162 KPESKPEGQSLFPDGAQRLESEQLGSVRNSEIAGTSLRE----SRPDDMEPTKEELQLLE 221

Query: 209 VELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYL 268
            EL ESITVRSTRQGERKARRARAA+K ASNVV++K+GSNSRKKRTSVQEVDYSDPLRYL
Sbjct: 222 AELAESITVRSTRQGERKARRARAADKAASNVVTLKLGSNSRKKRTSVQEVDYSDPLRYL 281

Query: 269 RGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLR 328
           RG T SSRLLTS+EE ELSAGIQDLLKLE+LH ELK RFG+EPSFVQWAAAAGIDQRTLR
Sbjct: 282 RGTTTSSRLLTSAEELELSAGIQDLLKLERLHKELKERFGDEPSFVQWAAAAGIDQRTLR 341

Query: 329 RRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK 388
           +RLNHG  CKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 342 KRLNHGIMCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK 401

Query: 389 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEA 448
           FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL SENG+QP+NEEVAEA
Sbjct: 402 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEA 461

Query: 449 TGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEK 508
           TGLSMKRLTAVLMTPKAPRSLDQK+G NMNLKPSEVIADPEAE+AEDLLTKQFMRQDLEK
Sbjct: 462 TGLSMKRLTAVLMTPKAPRSLDQKVGLNMNLKPSEVIADPEAESAEDLLTKQFMRQDLEK 521

Query: 509 VLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTIN 568
           VLDTLS REKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF+KLQNKK+  N
Sbjct: 522 VLDTLSPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFKKLQNKKRNKN 581

Query: 569 LQQYMF 575
           LQQY+F
Sbjct: 582 LQQYLF 583

BLAST of Spo16469.1 vs. NCBI nr
Match: gi|731419897|ref|XP_010661180.1| (PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera])

HSP 1 Score: 734.2 bits (1894), Expect = 1.800e-208
Identity = 399/584 (68.32%), Postives = 469/584 (80.31%), Query Frame = 1

		  

Query: 1   MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60
           M+CLLPQFKC PDTFS    LH          L +NR+ + FR QCA+ST  PP + + T
Sbjct: 1   MSCLLPQFKCPPDTFSTHPKLH---------ILSKNREAIYFRVQCALSTTSPPLSTSTT 60

Query: 61  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 120
           ++ D+EKLRLP +ES+SNS++A    T++  +G P E  F+  L  + L+ +EEAVIAAA
Sbjct: 61  AVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAA 120

Query: 121 AAEAVALARAAAKLAKDAALMAFNSQP----TKPVSKLEGQSL-HFSGAQLLENEQVGSM 180
           AAEAVALA+AA K+AKDAA +   +      TKP S L G     F   Q  E E++G +
Sbjct: 121 AAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGIL 180

Query: 181 RNFEGSE------NSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARR 240
            +  G+E      NSL+  D   +  D+EPT+EEL+LLE E  +SI VRS RQ ERKARR
Sbjct: 181 GDSVGAETGMVDYNSLQ--DVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARR 240

Query: 241 ARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAG 300
           ARAAEK ++ VVSV+ GS SR+KR S+QEVDYSDPLRYLRG T++SRLLT++EE ELS G
Sbjct: 241 ARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEG 300

Query: 301 IQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLV 360
           IQDLLKLEKL ++L+ RFG +P+F QWAAAAG+DQ+TLRRR N+G  CKDKMIKSN+RLV
Sbjct: 301 IQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLV 360

Query: 361 ISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 420
           ISIAKNYQG+GMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 361 ISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 420

Query: 421 RTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSL 480
           RTIRLPFHMVEATYRVKEARKQL SENG+ PNNEEVAEATGLSMKRL AVL+TPKAPRSL
Sbjct: 421 RTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSL 480

Query: 481 DQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLED 540
           DQKIG N NLKPSEVIADP+AETAE+LL KQFMR+DLEKVL++L+ REKQVIRWR+GLED
Sbjct: 481 DQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLED 540

Query: 541 GRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINLQQYM 574
           GR KTLQEIGELMGVSRERIRQIES AFRKL+NK++T +LQQY+
Sbjct: 541 GRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYL 573

BLAST of Spo16469.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q912_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_213170 PE=4 SV=1)

HSP 1 Score: 1079.3 bits (2790), Expect = 0.000e+0
Identity = 575/575 (100.00%), Postives = 575/575 (100.00%), Query Frame = 1

		  

Query: 1   MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60
           MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET
Sbjct: 31  MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 90

Query: 61  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 120
           SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA
Sbjct: 91  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 150

Query: 121 AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG 180
           AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG
Sbjct: 151 AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG 210

Query: 181 SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV 240
           SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV
Sbjct: 211 SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV 270

Query: 241 VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH 300
           VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH
Sbjct: 271 VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH 330

Query: 301 DELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG 360
           DELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG
Sbjct: 331 DELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG 390

Query: 361 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420
           MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
Sbjct: 391 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 450

Query: 421 ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK 480
           ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK
Sbjct: 451 ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK 510

Query: 481 PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE 540
           PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE
Sbjct: 511 PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE 570

Query: 541 LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL 576
           LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL
Sbjct: 571 LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL 605

BLAST of Spo16469.1 vs. UniProtKB/TrEMBL
Match: Q710C3_SPIOL (Sigma factor OS=Spinacia oleracea GN=sig2 PE=2 SV=2)

HSP 1 Score: 1075.8 bits (2781), Expect = 0.000e+0
Identity = 573/575 (99.65%), Postives = 574/575 (99.83%), Query Frame = 1

		  

Query: 1   MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60
           MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET
Sbjct: 1   MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60

Query: 61  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 120
           SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA
Sbjct: 61  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 120

Query: 121 AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG 180
           AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG
Sbjct: 121 AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEG 180

Query: 181 SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV 240
           SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV
Sbjct: 181 SENSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNV 240

Query: 241 VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH 300
           VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH
Sbjct: 241 VSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLH 300

Query: 301 DELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG 360
           DELKVRFG+ PSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG
Sbjct: 301 DELKVRFGKSPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSG 360

Query: 361 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420
           MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
Sbjct: 361 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420

Query: 421 ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK 480
           ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK
Sbjct: 421 ATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLK 480

Query: 481 PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE 540
           PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE
Sbjct: 481 PSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGE 540

Query: 541 LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL 576
           LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL
Sbjct: 541 LMGVSRERIRQIESSAFRKLQNKKKTINLQQYMFL 575

BLAST of Spo16469.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EQ59_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g172600 PE=4 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 1.400e-220
Identity = 421/486 (86.63%), Postives = 444/486 (91.36%), Query Frame = 1

		  

Query: 89  LSTLGSPAEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPT 148
           L  L   A+ KFDTAL A+LLIENEEAVIAAAAAEA+ALARAA KLAKDAALMA +SQP 
Sbjct: 103 LPELNDAAQTKFDTALAAELLIENEEAVIAAAAAEALALARAALKLAKDAALMAVSSQPI 162

Query: 149 KPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDTVSEPADMEPTIEELQLLE 208
           KP SK EGQSL   GAQ LE+EQ+GS+RN E +  SLRE    S P DMEPT EELQLLE
Sbjct: 163 KPESKPEGQSLFPDGAQRLESEQLGSVRNSEIAGTSLRE----SRPDDMEPTKEELQLLE 222

Query: 209 VELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYL 268
            EL ESITVRSTRQGERKARRARAA+K ASNVV++K+GSNSRKKRTSVQEVDYSDPLRYL
Sbjct: 223 AELAESITVRSTRQGERKARRARAADKAASNVVTLKLGSNSRKKRTSVQEVDYSDPLRYL 282

Query: 269 RGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLR 328
           RG T SSRLLTS+EE ELSAGIQDLLKLE+LH ELK RFG+EPSFVQWAAAAGIDQRTLR
Sbjct: 283 RGTTTSSRLLTSAEELELSAGIQDLLKLERLHKELKERFGDEPSFVQWAAAAGIDQRTLR 342

Query: 329 RRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK 388
           +RLNHG  CKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 343 KRLNHGIMCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK 402

Query: 389 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEA 448
           FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL SENG+QP+NEEVAEA
Sbjct: 403 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEA 462

Query: 449 TGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEK 508
           TGLSMKRLTAVLMTPKAPRSLDQK+G NMNLKPSEVIADPEAE+AEDLLTKQFMRQDLEK
Sbjct: 463 TGLSMKRLTAVLMTPKAPRSLDQKVGLNMNLKPSEVIADPEAESAEDLLTKQFMRQDLEK 522

Query: 509 VLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTIN 568
           VLDTLS REKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF+KLQNKK+  N
Sbjct: 523 VLDTLSPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFKKLQNKKRNKN 582

Query: 569 LQQYMF 575
           LQQY+F
Sbjct: 583 LQQYLF 584

BLAST of Spo16469.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVH1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g172600 PE=4 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 1.400e-220
Identity = 421/486 (86.63%), Postives = 444/486 (91.36%), Query Frame = 1

		  

Query: 89  LSTLGSPAEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPT 148
           L  L   A+ KFDTAL A+LLIENEEAVIAAAAAEA+ALARAA KLAKDAALMA +SQP 
Sbjct: 102 LPELNDAAQTKFDTALAAELLIENEEAVIAAAAAEALALARAALKLAKDAALMAVSSQPI 161

Query: 149 KPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDTVSEPADMEPTIEELQLLE 208
           KP SK EGQSL   GAQ LE+EQ+GS+RN E +  SLRE    S P DMEPT EELQLLE
Sbjct: 162 KPESKPEGQSLFPDGAQRLESEQLGSVRNSEIAGTSLRE----SRPDDMEPTKEELQLLE 221

Query: 209 VELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYL 268
            EL ESITVRSTRQGERKARRARAA+K ASNVV++K+GSNSRKKRTSVQEVDYSDPLRYL
Sbjct: 222 AELAESITVRSTRQGERKARRARAADKAASNVVTLKLGSNSRKKRTSVQEVDYSDPLRYL 281

Query: 269 RGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLR 328
           RG T SSRLLTS+EE ELSAGIQDLLKLE+LH ELK RFG+EPSFVQWAAAAGIDQRTLR
Sbjct: 282 RGTTTSSRLLTSAEELELSAGIQDLLKLERLHKELKERFGDEPSFVQWAAAAGIDQRTLR 341

Query: 329 RRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK 388
           +RLNHG  CKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 342 KRLNHGIMCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFK 401

Query: 389 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEA 448
           FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL SENG+QP+NEEVAEA
Sbjct: 402 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEA 461

Query: 449 TGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEK 508
           TGLSMKRLTAVLMTPKAPRSLDQK+G NMNLKPSEVIADPEAE+AEDLLTKQFMRQDLEK
Sbjct: 462 TGLSMKRLTAVLMTPKAPRSLDQKVGLNMNLKPSEVIADPEAESAEDLLTKQFMRQDLEK 521

Query: 509 VLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTIN 568
           VLDTLS REKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF+KLQNKK+  N
Sbjct: 522 VLDTLSPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFKKLQNKKRNKN 581

Query: 569 LQQYMF 575
           LQQY+F
Sbjct: 582 LQQYLF 583

BLAST of Spo16469.1 vs. UniProtKB/TrEMBL
Match: D7UB90_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0024g00640 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 1.200e-208
Identity = 399/584 (68.32%), Postives = 469/584 (80.31%), Query Frame = 1

		  

Query: 1   MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60
           M+CLLPQFKC PDTFS    LH          L +NR+ + FR QCA+ST  PP + + T
Sbjct: 1   MSCLLPQFKCPPDTFSTHPKLH---------ILSKNREAIYFRVQCALSTTSPPLSTSTT 60

Query: 61  SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 120
           ++ D+EKLRLP +ES+SNS++A    T++  +G P E  F+  L  + L+ +EEAVIAAA
Sbjct: 61  AVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAA 120

Query: 121 AAEAVALARAAAKLAKDAALMAFNSQP----TKPVSKLEGQSL-HFSGAQLLENEQVGSM 180
           AAEAVALA+AA K+AKDAA +   +      TKP S L G     F   Q  E E++G +
Sbjct: 121 AAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGIL 180

Query: 181 RNFEGSE------NSLREGDTVSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARR 240
            +  G+E      NSL+  D   +  D+EPT+EEL+LLE E  +SI VRS RQ ERKARR
Sbjct: 181 GDSVGAETGMVDYNSLQ--DVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARR 240

Query: 241 ARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAG 300
           ARAAEK ++ VVSV+ GS SR+KR S+QEVDYSDPLRYLRG T++SRLLT++EE ELS G
Sbjct: 241 ARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEG 300

Query: 301 IQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLV 360
           IQDLLKLEKL ++L+ RFG +P+F QWAAAAG+DQ+TLRRR N+G  CKDKMIKSN+RLV
Sbjct: 301 IQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLV 360

Query: 361 ISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 420
           ISIAKNYQG+GMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 361 ISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 420

Query: 421 RTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSL 480
           RTIRLPFHMVEATYRVKEARKQL SENG+ PNNEEVAEATGLSMKRL AVL+TPKAPRSL
Sbjct: 421 RTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSL 480

Query: 481 DQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLED 540
           DQKIG N NLKPSEVIADP+AETAE+LL KQFMR+DLEKVL++L+ REKQVIRWR+GLED
Sbjct: 481 DQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLED 540

Query: 541 GRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINLQQYM 574
           GR KTLQEIGELMGVSRERIRQIES AFRKL+NK++T +LQQY+
Sbjct: 541 GRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYL 573

BLAST of Spo16469.1 vs. ExPASy Swiss-Prot
Match: SIGB_ARATH (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2)

HSP 1 Score: 652.5 bits (1682), Expect = 4.200e-186
Identity = 366/580 (63.10%), Postives = 441/580 (76.03%), Query Frame = 1

		  

Query: 2   TCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAETS 61
           +CLLPQFKC PD+FSI          +S  +   N+  V F+PQCAVST P    A  TS
Sbjct: 3   SCLLPQFKCPPDSFSIHF-------RTSFCAPKHNKGSVFFQPQCAVSTSP----ALLTS 62

Query: 62  IFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAAA 121
           + DV KLRLP  +++S+SL +  Q T+    G   E K+  AL ++ L+ ++EAV+ AAA
Sbjct: 63  MLDVAKLRLPSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALASETLLTSDEAVVVAAA 122

Query: 122 AEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGS 181
           AEAVALARAA K+AKDA L   ++      S    +   +   Q  E E+ G + +   S
Sbjct: 123 AEAVALARAAVKVAKDATLFKNSNNTNLLTSSTADKRSKWD--QFTEKERAGILGHLAVS 182

Query: 182 ENSLREGDTVSEPADMEPTI--------EELQLLEVELDESITVRSTRQGERKARRARAA 241
           +N +   D ++  A  + +I        EE++LLE +   S+ VRSTRQ ERKARRA+  
Sbjct: 183 DNGI-VSDKITASASNKESIGDLESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGL 242

Query: 242 EKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDL 301
           EK AS + SVK GS+ +KKR   QEVD++DPLRYLR  T+SS+LLT  EE ELSAGIQDL
Sbjct: 243 EKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDL 302

Query: 302 LKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIA 361
           LKLE+L  EL  R G +P+F QWA+AAG+DQ++LR+R++HGT CKDKMIKSN+RLVISIA
Sbjct: 303 LKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIA 362

Query: 362 KNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 421
           KNYQG+GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IR
Sbjct: 363 KNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIR 422

Query: 422 LPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKI 481
           LPFHMVEATYRVKEARKQL SE GK P NEE+AEATGLSMKRL AVL++PK PRSLDQKI
Sbjct: 423 LPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKI 482

Query: 482 GFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMK 541
           G N NLKPSEVIADPEA T+ED+L K+FMRQDL+KVLD+L +REKQVIRWRFG+EDGRMK
Sbjct: 483 GMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMK 542

Query: 542 TLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINLQQYM 574
           TLQEIGE+MGVSRER+RQIESSAFRKL+NKK+  +LQQY+
Sbjct: 543 TLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYL 568

BLAST of Spo16469.1 vs. ExPASy Swiss-Prot
Match: SIGA1_SYNE7 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) GN=sigA1 PE=3 SV=2)

HSP 1 Score: 277.7 bits (709), Expect = 2.800e-73
Identity = 148/323 (45.82%), Postives = 210/323 (65.02%), Query Frame = 1

		  

Query: 251 KKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGEE 310
           K +  V++    D +R         RLL + EE EL+  I DLL LE++ DEL  +    
Sbjct: 77  KAKAKVRKTYTEDSIRLYLQEIGRIRLLRADEEIELARQIADLLALERIRDELLEQLDRL 136

Query: 311 PSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEG 370
           PS  +WAAA        RRRL  G   KDKM++SN+RLV+SIAK Y   G++ QDL+QEG
Sbjct: 137 PSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEG 196

Query: 371 CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARK 430
             GL+R AEKFD  KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E   R+K+  K
Sbjct: 197 SLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTK 256

Query: 431 QLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEA 490
            L  E G++P  EE+A    +++++L  +  + + P SL+  IG   + +  + I + + 
Sbjct: 257 LLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-EADG 316

Query: 491 ETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIR 550
           ET ED + K  +R+DLE VL TLS RE+ V+R R+GL+DGRMKTL+EIG+L  V+RERIR
Sbjct: 317 ETPEDEVAKNLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRERIR 376

Query: 551 QIESSAFRKLQNKKKTINLQQYM 574
           QIE+ A RKL++  +   L++Y+
Sbjct: 377 QIEAKALRKLRHPNRNSILKEYI 398

BLAST of Spo16469.1 vs. ExPASy Swiss-Prot
Match: SIGA_NOSS1 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sigA PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.400e-72
Identity = 144/327 (44.04%), Postives = 216/327 (66.06%), Query Frame = 1

		  

Query: 247 SNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVR 306
           + SR++  S ++    D +R         RLL + EE EL+  I DLL+LE++ + L  +
Sbjct: 64  AKSRRRTQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSEK 123

Query: 307 FGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDL 366
              +P   +WA A  +     R RL+ G   KDKM++SN+RLV+SIAK Y   G++ QDL
Sbjct: 124 LERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDL 183

Query: 367 VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVK 426
           +QEG  GL+R AEKFD  KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E   R+K
Sbjct: 184 IQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIK 243

Query: 427 EARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIA 486
           +  K L  E G++P  EE+A    +++++L  +  + + P SL+  IG   + +  + I 
Sbjct: 244 KTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI- 303

Query: 487 DPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSR 546
           + + ET ED ++K  +R+DLEKVLD+LS RE+ V+R R+GL+DGRMKTL+EIG++  V+R
Sbjct: 304 ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTR 363

Query: 547 ERIRQIESSAFRKLQNKKKTINLQQYM 574
           ERIRQIE+ A RKL++  +   L++Y+
Sbjct: 364 ERIRQIEAKALRKLRHPNRNSVLKEYI 389

BLAST of Spo16469.1 vs. ExPASy Swiss-Prot
Match: SIGA_MICAE (RNA polymerase sigma factor SigA OS=Microcystis aeruginosa GN=sigA PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.000e-63
Identity = 123/263 (46.77%), Postives = 181/263 (68.82%), Query Frame = 1

		  

Query: 311 PSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEG 370
           P   +W A +       +RRL HG   K+KM++SN+RLV+SIAK Y   G++ QDL+QEG
Sbjct: 154 PLLEEWLAKSKEYLSAFKRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEG 213

Query: 371 CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARK 430
             GL+R AEKFD  KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E   R+K+  K
Sbjct: 214 SLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTK 273

Query: 431 QLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEA 490
            L  E  ++P  EE+A    +++++L  +  + + P SL+  IG   + +  + I + + 
Sbjct: 274 ILSQEMRRKPTEEEIATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-EADG 333

Query: 491 ETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIR 550
           ET ED ++K  +R+DLE VLDTLS RE+ V+R R+GL+DGRMKTL+EIG++  V+RERIR
Sbjct: 334 ETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIR 393

Query: 551 QIESSAFRKLQNKKKTINLQQYM 574
           QIE+ A RKL++  +   L++Y+
Sbjct: 394 QIEAKALRKLRHPNRNSILKEYI 415

BLAST of Spo16469.1 vs. ExPASy Swiss-Prot
Match: SIGA_SYNY3 (RNA polymerase sigma factor SigA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sigA PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.900e-61
Identity = 160/434 (36.87%), Postives = 236/434 (54.38%), Query Frame = 1

		  

Query: 186 REGDTVSEPADMEPTIEELQLLEVEL--DESITVRSTRQGERKARRARAAEKVASNVVSV 245
           +E  T +E A++E  IE  Q +  +   D+ I V    Q         A E     V  +
Sbjct: 5   KEPLTKAESAELEQEIELSQYINTDDIDDDDIDVEDLEQ------EVAATEGKEKKVRKI 64

Query: 246 KVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHD-- 305
           +  +  +K  T        D +R         RLL + EE EL+  I DLL+LE + D  
Sbjct: 65  RKDAVKKKPYTE-------DSIRIYLQEIGRIRLLRAEEEIELARQIADLLELELIRDNL 124

Query: 306 ---------------------ELKVRF----GEEP------SFV-----------QWAAA 365
                                  K R      +EP      S++           +W+  
Sbjct: 125 TLQLERQPSELEWGKQVWKLETAKQRLVGDKKKEPKKKDIDSYLANPDNELSLENEWSQQ 184

Query: 366 AGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAE 425
              +    RRRL      KDKM++SN+RLV+SIAK Y   G++ QDL+QEG  GL+R AE
Sbjct: 185 PNKNFAAFRRRLFLDRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAE 244

Query: 426 KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQ 485
           KFD  KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E   R+K+  K L  E  ++
Sbjct: 245 KFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRK 304

Query: 486 PNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTK 545
           P  EE+AE   +++++L  +  + + P SL+  IG   + +  + I + + ET ED ++K
Sbjct: 305 PTEEEIAEKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSK 364

Query: 546 QFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRK 574
             +R+DLE VLDTLS RE+ V+R R+GL+DGRMKTL+EIG++  V+RERIRQIE+ A RK
Sbjct: 365 NLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRK 424

BLAST of Spo16469.1 vs. TAIR (Arabidopsis)
Match: AT1G08540.1 (RNApolymerase sigma subunit 2)

HSP 1 Score: 652.5 bits (1682), Expect = 2.400e-187
Identity = 366/580 (63.10%), Postives = 441/580 (76.03%), Query Frame = 1

		  

Query: 2   TCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAETS 61
           +CLLPQFKC PD+FSI          +S  +   N+  V F+PQCAVST P    A  TS
Sbjct: 3   SCLLPQFKCPPDSFSIHF-------RTSFCAPKHNKGSVFFQPQCAVSTSP----ALLTS 62

Query: 62  IFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAAA 121
           + DV KLRLP  +++S+SL +  Q T+    G   E K+  AL ++ L+ ++EAV+ AAA
Sbjct: 63  MLDVAKLRLPSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALASETLLTSDEAVVVAAA 122

Query: 122 AEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGS 181
           AEAVALARAA K+AKDA L   ++      S    +   +   Q  E E+ G + +   S
Sbjct: 123 AEAVALARAAVKVAKDATLFKNSNNTNLLTSSTADKRSKWD--QFTEKERAGILGHLAVS 182

Query: 182 ENSLREGDTVSEPADMEPTI--------EELQLLEVELDESITVRSTRQGERKARRARAA 241
           +N +   D ++  A  + +I        EE++LLE +   S+ VRSTRQ ERKARRA+  
Sbjct: 183 DNGI-VSDKITASASNKESIGDLESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGL 242

Query: 242 EKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDL 301
           EK AS + SVK GS+ +KKR   QEVD++DPLRYLR  T+SS+LLT  EE ELSAGIQDL
Sbjct: 243 EKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDL 302

Query: 302 LKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIA 361
           LKLE+L  EL  R G +P+F QWA+AAG+DQ++LR+R++HGT CKDKMIKSN+RLVISIA
Sbjct: 303 LKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIA 362

Query: 362 KNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 421
           KNYQG+GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IR
Sbjct: 363 KNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIR 422

Query: 422 LPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKI 481
           LPFHMVEATYRVKEARKQL SE GK P NEE+AEATGLSMKRL AVL++PK PRSLDQKI
Sbjct: 423 LPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKI 482

Query: 482 GFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMK 541
           G N NLKPSEVIADPEA T+ED+L K+FMRQDL+KVLD+L +REKQVIRWRFG+EDGRMK
Sbjct: 483 GMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMK 542

Query: 542 TLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINLQQYM 574
           TLQEIGE+MGVSRER+RQIESSAFRKL+NKK+  +LQQY+
Sbjct: 543 TLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYL 568

BLAST of Spo16469.1 vs. TAIR (Arabidopsis)
Match: AT2G36990.1 (RNApolymerase sigma-subunit F)

HSP 1 Score: 231.1 bits (588), Expect = 1.700e-60
Identity = 174/545 (31.93%), Postives = 284/545 (52.11%), Query Frame = 1

		  

Query: 37  RDLVCFRPQCAVSTPPPPTAAAETSIFDV-EKLRLPYVESNS-NSLSAFAQSTFLSTLGS 96
           R+LV   P     T    + ++ +S+  + ++   P V S   NSLS    ++ LS    
Sbjct: 5   RNLVSSSPSFQTKTHLKSSYSSPSSVVMLHDQTTTPVVNSRHLNSLSRHFPASVLSQEPR 64

Query: 97  PAEVKFDTAL----TAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPTKP 156
                   AL    T++L +E  +     ++ E     +   +L     L      P   
Sbjct: 65  EESRPLSHALRDDRTSQLTLERRQFDELVSSREDEKFEQ---QLLHSTGLWNLLISPLTS 124

Query: 157 VSKLEGQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDTVSEPAD-MEPTIEELQLLEV 216
            +KL       + A+L +   +         + +L   DT + P+D ++ ++     + +
Sbjct: 125 ETKLPAVVSPLADAELCDVVALAQKALSASKQAALLVDDTEANPSDNIKDSLSTSSSMSL 184

Query: 217 ELDESITVRSTRQGERKARRARAAEKVASNVVSVK--VGSNSRKKRTSVQEVDYSDPLRY 276
               +I VRS RQ ER+A+  RA +   SN V  +  V   +  K+   Q  D  D L+ 
Sbjct: 185 PEKGNI-VRSKRQLERRAKNRRAPK---SNDVDDEGYVPQKTSAKKKYKQGADNDDALQL 244

Query: 277 LRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTL 336
                 + +LLT+ EE EL + IQ LLKLEK+  +L+ + G EP+  +WA A GI    L
Sbjct: 245 FLWGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVL 304

Query: 337 RRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGF 396
           +  ++ G   ++K+I +N+RLV+ IAK YQ  G+N QDL+QEG  GL++  EKF    G 
Sbjct: 305 KSDIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGC 364

Query: 397 KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAE 456
           +F+TYA+WWI+Q++RKS+   SRTIRLP ++     +V EARK  + E   +P+ EE+A 
Sbjct: 365 RFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAG 424

Query: 457 ATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLE 516
             G+S ++L  +L   + P S+ Q I  + +    E+  D   ET    + KQ MR  + 
Sbjct: 425 HVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVR 484

Query: 517 KVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTI 573
            +L+ LS +E+++I+ RFG++ G+ ++L EIGE+ G+S+ER+RQ+ES A  +L+    + 
Sbjct: 485 NLLNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSH 542

BLAST of Spo16469.1 vs. TAIR (Arabidopsis)
Match: AT3G53920.1 (RNApolymerase sigma-subunit C)

HSP 1 Score: 211.1 bits (536), Expect = 1.800e-54
Identity = 124/370 (33.51%), Postives = 223/370 (60.27%), Query Frame = 1

		  

Query: 205 QLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDP 264
           +L++   ++ + V S R+ ++KARR+    +      S+ +G  +      V  V    P
Sbjct: 208 ELVDTTPNQQVFVSSRRKVKKKARRSSVTAENGDQS-SLPIGLRTTWNNIDVPRV--RRP 267

Query: 265 LRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQ 324
            +Y +     SR      ETE+S G++ +  +E++  +L+   G+  S   WAAAAG+++
Sbjct: 268 PKYRKKRERISR-----NETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 327

Query: 325 RTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDAS 384
           + L R L++G +C+D+++KS   LV+ +A+NY+G G+  +DL+Q G  G+++GAE+FD +
Sbjct: 328 KLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHT 387

Query: 385 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENG-KQPNNE 444
           +G+KFSTY  +WI++++   +S  +R + +P  ++     +++ARK L + +G K   +E
Sbjct: 388 RGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADE 447

Query: 445 EVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMR 504
           E+A+ TG S+K++ A     K   S+D+K+G     K  E   D   E+ E+ + +Q  R
Sbjct: 448 EIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVMRQSAR 507

Query: 505 QDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNK 564
           +D+  +L+ L  REKQV+  R+GL+D R K+L+EIG+L+ VS+E IR+IE  A  KL+++
Sbjct: 508 RDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMAKLRDQ 567

Query: 565 KKTINLQQYM 574
               +L+ Y+
Sbjct: 568 PNAEDLRYYL 569

BLAST of Spo16469.1 vs. TAIR (Arabidopsis)
Match: AT5G13730.1 (sigma factor 4)

HSP 1 Score: 184.9 bits (468), Expect = 1.400e-46
Identity = 107/303 (35.31%), Postives = 179/303 (59.08%), Query Frame = 1

		  

Query: 270 GATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLRR 329
           GA+ S   L+  EE +L   +++  KLE L   ++     E   V  A+  G  +R+   
Sbjct: 116 GASRSG-FLSRLEEVQLCLYLKEGAKLENLGTSVEEN---EMVSVLLASGRGKKKRSANE 175

Query: 330 RLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKF 389
            L      ++K+ +   RLV+SIA  YQG G+NLQDL+QEG  GL+RGAE+FD  +G+K 
Sbjct: 176 ILCRRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKL 235

Query: 390 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEAT 449
           STY +WWIKQA+ ++++ +SR ++LP  M E T +V EA   L  +  +QP+ EE+AE  
Sbjct: 236 STYVYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHL 295

Query: 450 GLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKV 509
            L++  +   +   ++P SLD+    N  +   E++  P+    E+++ ++ M+ ++E++
Sbjct: 296 NLNVSAVRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQL 355

Query: 510 LDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINL 569
           L +L++RE +V+   FGL      + +EIG+ + +SRER+RQI   A +KL+N     +L
Sbjct: 356 LGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDL 414

Query: 570 QQY 573
           + Y
Sbjct: 416 KIY 414

BLAST of Spo16469.1 vs. TAIR (Arabidopsis)
Match: AT1G64860.1 (sigma factor A)

HSP 1 Score: 169.5 bits (428), Expect = 6.100e-42
Identity = 124/347 (35.73%), Postives = 187/347 (53.89%), Query Frame = 1

		  

Query: 227 ARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLR-YLRGATNSSRLLTSSEETE 286
           AR+ R   K  +N+  VK          +V +V     +R Y++G   S  +L+  E   
Sbjct: 159 ARQRRIGAKKKTNMTHVK----------AVSDVSSGKQVRGYVKGVI-SEDVLSHVEVVR 218

Query: 287 LSAGIQDLLKLEKLHDELKVRFGEEPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSN 346
           LS  I+  L+L+     LK R G EPS  Q A +  I +  L+  L      ++K+  SN
Sbjct: 219 LSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSN 278

Query: 347 VRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSL 406
           VRLV+SIA+ Y   G  + DLVQ G  GL+RG EKFD+SKGF+ STY +WWI+Q V ++L
Sbjct: 279 VRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRAL 338

Query: 407 SDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKA 466
            D SRT+RLP H+ E    ++ A K  L E G  P+ + +AE+  +S K++         
Sbjct: 339 VDNSRTLRLPTHLHERLGLIRNA-KLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSK 398

Query: 467 PRSLDQKIGFNMNLKPSEV----IADPEAET-----AEDLLTKQFMRQDLEKVLD-TLSS 526
             SLD+    ++N  P E     IAD   E       +DL     +++++ K++  TL  
Sbjct: 399 VFSLDRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLA----LKEEVSKLISATLGE 458

Query: 527 REKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQN 563
           REK++IR  +GL D    T ++I + +G+SRER+RQ+   A  KL++
Sbjct: 459 REKEIIRLYYGL-DKECLTWEDISKRIGLSRERVRQVGLVALEKLKH 488

The following BLAST results are available for this feature:
BLAST of Spo16469.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902074113|gb|KNA03016.1|0.0e+0100.hypothetical protein SOVF_2131... [more]
gi|85813983|emb|CAD20831.2|0.0e+099.6sigma factor [Spinacia olerace... [more]
gi|731348676|ref|XP_010685608.1|2.0e-22086.6PREDICTED: RNA polymerase sigm... [more]
gi|731348678|ref|XP_010685609.1|2.0e-22086.6PREDICTED: RNA polymerase sigm... [more]
gi|731419897|ref|XP_010661180.1|1.8e-20868.3PREDICTED: RNA polymerase sigm... [more]
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BLAST of Spo16469.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9Q912_SPIOL0.0e+0100.Uncharacterized protein (Fragm... [more]
Q710C3_SPIOL0.0e+099.6Sigma factor OS=Spinacia olera... [more]
A0A0J8EQ59_BETVU1.4e-22086.6Uncharacterized protein OS=Bet... [more]
A0A0J8BVH1_BETVU1.4e-22086.6Uncharacterized protein OS=Bet... [more]
D7UB90_VITVI1.2e-20868.3Putative uncharacterized prote... [more]
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BLAST of Spo16469.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SIGB_ARATH4.2e-18663.1RNA polymerase sigma factor si... [more]
SIGA1_SYNE72.8e-7345.8RNA polymerase sigma factor Si... [more]
SIGA_NOSS11.4e-7244.0RNA polymerase sigma factor Si... [more]
SIGA_MICAE2.0e-6346.7RNA polymerase sigma factor Si... [more]
SIGA_SYNY31.9e-6136.8RNA polymerase sigma factor Si... [more]
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BLAST of Spo16469.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G08540.12.4e-18763.1RNApolymerase sigma subunit 2[more]
AT2G36990.11.7e-6031.9RNApolymerase sigma-subunit F[more]
AT3G53920.11.8e-5433.5RNApolymerase sigma-subunit C[more]
AT5G13730.11.4e-4635.3sigma factor 4[more]
AT1G64860.16.1e-4235.7sigma factor A[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 513..525
score: 2.6E-23coord: 389..397
score: 2.6E-23coord: 549..560
score: 2.6E-23coord: 365..378
score: 2.6E-23coord: 534..549
score: 2.6
IPR000943RNA polymerase sigma-70PROSITEPS00716SIGMA70_2coord: 534..560
scor
IPR007624RNA polymerase sigma-70 region 3PFAMPF04539Sigma70_r3coord: 420..495
score: 1.5
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 341..411
score: 6.6
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 509..561
score: 5.2
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 503..573
score: 5.4E-26coord: 411..457
score: 1.3
IPR013324RNA polymerase sigma factor, region 3/4unknownSSF88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 475..569
score: 6.92E-24coord: 409..460
score: 6.1
IPR013325RNA polymerase sigma factor, region 2unknownSSF88946Sigma2 domain of RNA polymerase sigma factorscoord: 262..411
score: 2.04
IPR014284RNA polymerase sigma-70 like domainTIGRFAMsTIGR02937TIGR02937coord: 339..563
score: 9.9
IPR016262RNA polymerase sigma factor, SigB/C/D/F, plastidPIRPIRSF000767Sigma_factor_SigCcoord: 1..575
score: 2.5E
NoneNo IPR availableGENE3D1.10.601.10coord: 333..410
score: 4.6E-40coord: 219..295
score: 4.6
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 92..573
score: 7.1E
NoneNo IPR availablePANTHERPTHR30603:SF25SUBFAMILY NOT NAMEDcoord: 92..573
score: 7.1E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0044205 'de novo' UMP biosynthetic process
biological_process GO:0030163 protein catabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0016024 CDP-diacylglycerol biosynthetic process
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006342 chromatin silencing
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0006094 gluconeogenesis
biological_process GO:0010206 photosystem II repair
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0048481 plant ovule development
biological_process GO:0018106 peptidyl-histidine phosphorylation
biological_process GO:0010105 negative regulation of ethylene-activated signaling pathway
biological_process GO:0007005 mitochondrion organization
biological_process GO:0006424 glutamyl-tRNA aminoacylation
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0009902 chloroplast relocation
biological_process GO:0009987 cellular process
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0009640 photomorphogenesis
biological_process GO:0000338 protein deneddylation
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0009909 regulation of flower development
biological_process GO:0001510 RNA methylation
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006606 protein import into nucleus
biological_process GO:0006177 GMP biosynthetic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0009790 embryo development
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0006529 asparagine biosynthetic process
biological_process GO:0006522 alanine metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0048608 reproductive structure development
biological_process GO:0022414 reproductive process
biological_process GO:0009791 post-embryonic development
biological_process GO:0009657 plastid organization
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0045038 protein import into chloroplast thylakoid membrane
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0006417 regulation of translation
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0042793 plastid transcription
biological_process GO:0045037 protein import into chloroplast stroma
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0009658 chloroplast organization
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0007186 G-protein coupled receptor signaling pathway
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0042744 hydrogen peroxide catabolic process
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0009528 plastid inner membrane
cellular_component GO:0009508 plastid chromosome
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009533 chloroplast stromal thylakoid
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0009523 photosystem II
cellular_component GO:0010319 stromule
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0009332 glutamate-tRNA ligase complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009365 protein histidine kinase complex
cellular_component GO:0005840 ribosome
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005730 nucleolus
cellular_component GO:0005829 cytosol
cellular_component GO:0016020 membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009507 chloroplast
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016987 sigma factor activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003852 2-isopropylmalate synthase activity
molecular_function GO:0009927 histidine phosphotransfer kinase activity
molecular_function GO:0003922 GMP synthase (glutamine-hydrolyzing) activity
molecular_function GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0000155 phosphorelay sensor kinase activity
molecular_function GO:0000156 phosphorelay response regulator activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004818 glutamate-tRNA ligase activity
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0051740 ethylene binding
molecular_function GO:0004605 phosphatidate cytidylyltransferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016462 pyrophosphatase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
RNA-Seq Expression