Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAAGTGTAGCATTGCATTTGTTGTGACACTTCTTTTAGTGCAATCTGCCTTGGCAGCTAGAAATGCACCAGTAAAAACCACCACAACAACCACCAATGTGGTGGACACCACTAAGAAAGGTGTAGTTGCACCAACAACTGACAAGAAGAACTTTGTTTCTTTCGGTGGGATCGGAGGAGCCGCTGGCGCTGGTGTTGGCGTTGTAGGAGGACTACCCGTTGGTGGTATCGGTGCTGGTGGACTAGGAGGAGCTGGTGGTCTAGGAGGTTTGGGTGGAGCTGGAGCTGGTGGACTAGGAGGATTGGGTGGAGCTGGTGGCTTAGGCGGTGCTGGAGGAGGACTTGGTGGTTTAGGCGGTGCTGGGGGAGGACTTGGTGGTTTAGGCGGTGGTACTGGAGGACTTGGTGGTTTAGGTGGCGGTGCTGGAGGACTTGGTGGGTTAGGTGGCGGTGCGGGAGGCCTTGGTGGTGCTGGTGGAGGTGCTGGTTTGGGTGGACTTGGTGGGGCAGGTTGCGGTGGTGGTCTTCCAGTTATTCCTTAA ATGGGTAAGTGTAGCATTGCATTTGTTGTGACACTTCTTTTAGTGCAATCTGCCTTGGCAGCTAGAAATGCACCAGTAAAAACCACCACAACAACCACCAATGTGGTGGACACCACTAAGAAAGGTGTAGTTGCACCAACAACTGACAAGAAGAACTTTGTTTCTTTCGGTGGGATCGGAGGAGCCGCTGGCGCTGGTGTTGGCGTTGTAGGAGGACTACCCGTTGGTGGTATCGGTGCTGGTGGACTAGGAGGAGCTGGTGGTCTAGGAGGTTTGGGTGGAGCTGGAGCTGGTGGACTAGGAGGATTGGGTGGAGCTGGTGGCTTAGGCGGTGCTGGAGGAGGACTTGGTGGTTTAGGCGGTGCTGGGGGAGGACTTGGTGGTTTAGGCGGTGGTACTGGAGGACTTGGTGGTTTAGGTGGCGGTGCTGGAGGACTTGGTGGGTTAGGTGGCGGTGCGGGAGGCCTTGGTGGTGCTGGTGGAGGTGCTGGTTTGGGTGGACTTGGTGGGGCAGGTTGCGGTGGTGGTCTTCCAGTTATTCCTTAA ATGGGTAAGTGTAGCATTGCATTTGTTGTGACACTTCTTTTAGTGCAATCTGCCTTGGCAGCTAGAAATGCACCAGTAAAAACCACCACAACAACCACCAATGTGGTGGACACCACTAAGAAAGGTGTAGTTGCACCAACAACTGACAAGAAGAACTTTGTTTCTTTCGGTGGGATCGGAGGAGCCGCTGGCGCTGGTGTTGGCGTTGTAGGAGGACTACCCGTTGGTGGTATCGGTGCTGGTGGACTAGGAGGAGCTGGTGGTCTAGGAGGTTTGGGTGGAGCTGGAGCTGGTGGACTAGGAGGATTGGGTGGAGCTGGTGGCTTAGGCGGTGCTGGAGGAGGACTTGGTGGTTTAGGCGGTGCTGGGGGAGGACTTGGTGGTTTAGGCGGTGGTACTGGAGGACTTGGTGGTTTAGGTGGCGGTGCTGGAGGACTTGGTGGGTTAGGTGGCGGTGCGGGAGGCCTTGGTGGTGCTGGTGGAGGTGCTGGTTTGGGTGGACTTGGTGGGGCAGGTTGCGGTGGTGGTCTTCCAGTTATTCCTTAA MGKCSIAFVVTLLLVQSALAARNAPVKTTTTTTNVVDTTKKGVVAPTTDKKNFVSFGGIGGAAGAGVGVVGGLPVGGIGAGGLGGAGGLGGLGGAGAGGLGGLGGAGGLGGAGGGLGGLGGAGGGLGGLGGGTGGLGGLGGGAGGLGGLGGGAGGLGGAGGGAGLGGLGGAGCGGGLPVIP Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16514.1 vs. NCBI nr
Match: gi|902087552|gb|KNA03256.1| (hypothetical protein SOVF_210940 [Spinacia oleracea]) HSP 1 Score: 241.5 bits (615), Expect = 1.100e-60 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Spo16514.1 vs. NCBI nr
Match: gi|731347438|ref|XP_010684988.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 124.8 bits (312), Expect = 1.500e-25 Identity = 139/183 (75.96%), Postives = 143/183 (78.14%), Query Frame = 1
BLAST of Spo16514.1 vs. NCBI nr
Match: gi|971581407|ref|XP_015159469.1| (PREDICTED: glycine-rich cell wall structural protein-like [Solanum tuberosum]) HSP 1 Score: 63.9 bits (154), Expect = 3.200e-7 Identity = 108/188 (57.45%), Postives = 122/188 (64.89%), Query Frame = 1
BLAST of Spo16514.1 vs. NCBI nr
Match: gi|224065479|ref|XP_002301827.1| (glycine-rich family protein [Populus trichocarpa]) HSP 1 Score: 61.2 bits (147), Expect = 2.100e-6 Identity = 102/192 (53.12%), Postives = 121/192 (63.02%), Query Frame = 1
BLAST of Spo16514.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9R6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_210940 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 7.900e-61 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Spo16514.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWQ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167380 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.100e-25 Identity = 139/183 (75.96%), Postives = 143/183 (78.14%), Query Frame = 1
BLAST of Spo16514.1 vs. UniProtKB/TrEMBL
Match: M1B6B1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014690 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.300e-7 Identity = 108/188 (57.45%), Postives = 122/188 (64.89%), Query Frame = 1
BLAST of Spo16514.1 vs. UniProtKB/TrEMBL
Match: B9GR90_POPTR (Glycine-rich family protein OS=Populus trichocarpa GN=POPTR_0002s25370g PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.500e-6 Identity = 102/192 (53.12%), Postives = 121/192 (63.02%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16514.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 4
BLAST of Spo16514.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 4
BLAST of Spo16514.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo16514.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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