Spo16576 (gene) | SpinachBase

Overview


Name	Spo16576
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RNA-binding protein, putative
Location	Super_scaffold_71 : 2705925 .. 2715145 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATTTCTAGGTAAAATTTCGCTGTTTTCCTCTTCAATTCCATCCAGTTTTTCATGGCTATTCAACTTCAAGTCGAATAGTGCTCTCAAGGAGAGGTAGGAACTTTCTCACGAGGACGAATCTCCCAAGGACAACTGGTATACTCACCTATCTCCCTCTCTTTCACACGCCTTTAATTGGGTACATCTTTTTTCAACATTTATGGCTGTTTGCACTTCAATTTGCTTTAATTTCCCCTCTTTTTCGAGCTTCAGTAGACTGGTTGTGTTTAATTTGGATGCGTTTATTTGTATGACCTGGGGCTGTGCTCAGTCTTGTGAATTTTTTAGTGTAAATAAAAGTCTGGGTAGAATGTTGATAGTATTTGGTTTTAACTTTGCGTTTTACTCTTAATTGTTCAGTTTAGTGCAGTCAGTATATGTGTGACTTTTTCTCTTAGTTGTTCATAAATTGTCAGGTTACTAGACGGGGTTTTGAATCCGGAGGCTAGCTGCTATGCTTGGTGATATTGCAAAAGCAAGAATATAATCAATTTGATGCTTATGATTTATTAAGGGGCTTTATGTATGGAATGAGATCATGTTTTGGAACTGTGATCAATAAGTGCTCTATGTACTCAGGTTCTAACTGAAGTACATTCATAGGCGTCTGTGGTAATATGTGGTAGTATGTGGTCTGATGCCTAGTTTCTAACTAAAGTATACCCATAAGTTCTTCCCTTCCCTTGATGGGTAGAAAGTCTTGTGCTTCAAATTGGTGCAGGTGCACTATTGTGTGTGTGATAGTAGTCGGGGGCTGAGAAATTAGAGGTAGAAAATGCTTCAGAACTTGCTCGCGATGCATTTCATTTATAGGGAAAATTCTGCTTCCTTTAAACAAGAACTATTGCATGAGCTGGAGGTTTTTGTGCTGCAGGGTCTGTATAAGAATATGTTAGGCAGGCTTCCTCTCAGGACGAAACTCCTCAGGTTCTTCCCAAGTAATGGGATCTCTCTGGATTGCCCAAACATTAACAAAAACAAGAGCCTAGCAGAAATGTCATAACCATTTATCTTTAAATCTTGAGTTGATTCTCGAGGCACCAGTAATAGAACTGATGGATGCAGCTGTAGAGCTTCCTTGATCACTGCTTTCAAGTACTTCATATTGTCCAAACCAATCCTCACTTATATGTTCATTGTCTCTAGCAATTCCTCTTACCTCTCTTTGAAGTTGTTCTATTACTCAAGGATTTCTCATGAGTTCTGTCATTGCCCATTCTAGCAGACTAGCACTCCTGCTGCAAACGCATCCTACATGAAACGGTTCAACATTGAGAGTTCATTGATAAATCCATAATTAGCTGTTTCTTTTTTTGGATAAGGGTGAAATTCTAAAATTTATGATCGAAACAAAATACGAATATTTACCAGTATCAAAGCTTTGATGCTATTTCCTTTTAGAGAAAAACCAGTTGAATTTTCCTTCTGAACTTGAAGTAAAACGTCTACAAAATCCTTAGCTACATTCTCATTCTCATTATTATTTTCTGTTCGCTTAAGTCGATCTGAATGCTCTCTAAGTATTCCTTCCAGTAGAAAATCAAACCTTTTTGCAACTTTTTCCAATCTTTTATCCATACCATTGAATCTATTCACCCAAGCCAACTAGGGAATGAAATCCCCAACATTAAATACCCCAAGTAACTCCACAAACTCCTTTAGGACCTCCTTAAAATCAATGTCACTTTGCTGATTTTCGGTGTATTTTCTTCCAAATGCCACCCTGCGTACCACATTATTTGTCAATACGACAAACATTTTGCTGAAACTTCTGCATCAACAGAGTTGTTTCGTCATTTCTTATATCTCTAAAAGATCGAACTCTTCTATTGCTCAAAAGTTGAAGCACACATATACTCTTCATCTGTGTCCAATATTCTCCATAAGGGCACACAGCAACATCCCTGCTATTGTAAAGTAGCTTATCATTTATGCTGAACTTGGGCCAGTTGGAGAATACAGAATCATGAGTTTAAACTCATGATTTCTCTGTGCTATCTTTCCCGATGAGACTATAAGTGTAGGTCTGTTTGGCAAATTGATTTTTCTCCAAGGACGCTGTTTTTTTTAAACTTTCTAATTTTGGTTACATCATAAATGATGGGTCGTTCTACATTGGAGTAGAGTCTCTTTTCGGGATTAATGTAAAGTCAAACACTAATCAACTGATGGGAAGCATTAATAATTTCCTCTAAACACTTATCAAGTACATGATGGAAATACTTTACCCCGTTCCCTCGAAAATAAAACGTTGCCCCTAATTTCCAGTAAAATTATTCTCATTATTATCAGTTTATCACAATTTACCTTAATTCAACAAACAAACCAAAATATATTTTCTCAAACAACATGCACTTATTTATTTATTTAAGAAGAATAATACAGAGTATGAGAAAAAAGAGAAAATCAGAAAAGGTACATGCAATCTGGGCATTTAATCACACTAAATAATCATAAAAAGAGAGAAAACATAGACTTACTAAAACTCCGCAAACCTGATTATTCGGACCATAGAAATCACAGCAAAAATGAATACAACAACAACAACAACAAAGCCTTAGTCCCAAAATGATTTGGGATCTGCTAAGATGAATCGTCATAGGAGATGGTTTATGTGACCAATCAAACAAGAAAGGAACGGGAAGTTAAAAGAATAAACAAGGAAGAGGGGGAAAGTGAAAGTAATTAGATTCTAAACTGAAGATGTATAAGTCAAATAACGTCATCAACGTATATTCTCTCCCTCCACTTTGTCCTATCCAACGCCATATTTTCCTCAATAACAGAGTAGGCTCATATCGTGCTCAATCACATTCCTCCAAGTTTTCTTAGGTCTTTCCCTACCCCTTGCAATCCTATCACTTTGCCACCCTTCTAGCCTCCTAACCGGGACATCACTTGATCTTCTTCTTACATGTCCAAACCATTTTAAACGATTTCCCGTCATCTTAAACTGAATCGGTGCAACCCCTACTTTCTTCCTAATAGTCTCATTCCTCAATTGATCCTTTCTTGTATGACCACACATCCAACGTAACATGCGCATCTCCCACATTCATCTTATGCATAGCGAAAATGAATAAGAAAGATAAATTTAATTATTTGATATGAATATCAAAAATATAAAATTGAGGATGGAGAAGGAATTGACTTACGTATTAGCTCAAAGAAATTTCCGGAGGTATCTTTATCTGCCTTTGTTAAAGGAGTAGGAAAAATAAGGGCTTTAATTTCTATAAAGAACACGTGTAGTATGATAGTCGAACAGCCACGGAACAAGTGTGTTGCAAACAAACACGGATACACATGACTACATGAGTAGCACCTCACTTGTAATTATAATCCACAATAAGGGTATAATTGGAAATAAATTACGCAAAACATTTTCATATGTTCGCCTTTTTTATGTAAGAGAGATTTCCCAACTTTAAAAAAAAAAAAAAAACAAAAAATTTTCATTATTAAAAAACCTTTTGAGAAAAGTTATCAAAAATGACAATTGCTCACTCTCACTCCATTTATGCCCCTGCCTGAGCCACCATGATATTGCCCATCATCCTATCTTAAATTTTTTAAAAGCATGGAATTAAACATACAGAGTGTACTGTAATGATGATTTGATGAAGTTATACAAAAATCACTTTAAAAGCAAAACAAAAATCGTGCATCGCACTTGTTTAAGACTAGTTTTTCTTATAGGACTAGGACTTTTTGTCTCTTGGTCTTTCATTTGGAATTGACTTTGTCTTTTTCATTTGGAGAAGATGGGTGAAGATTGATGAGAAGAAAGAAAAAGGAGGTAAAGAGGAAAAGTGGTTTCCCTTACTTTTAAATGGAAAAAGTTTTTTCAAAAGTTATGAAAAATTGTTTTTCATACCTTGCCAAAACAAACAACATAAAATGATTGAAAAGAGAAAATTTGTTTTCCATGAAAACGTTTTACACCAAACCAAACACTCCCTAAATGGTATGTACCCCTGAGCCAGGAAAATATGATCCTTCAGGCATAAAAGGGTTTCAACATTTATATATGCATTGCTCCATTCGTTATTCACCATAACTCTATCCAATTCAGAATGGACTCTATCCTCACCTTGTTGCTTAGTGGTCCAAGTATAGAATCTCCCCGTGCACTTCATATCGTCCAGCCTGCAAAACTCTACACACAACCTGAATGGTGCTATTTCCACATTCCTAACAATACTACCACCCACCCTTTCATTGGCACTAAGAACAATATTAAAATCACCAGGCAAAACCCAAGGACTTCTCTGAATATCATACAACCCAATCCTCCATAACCTTTCCCTGCCTGTCCATCATTGAAGGCATAGATAAAGGTATGCCAGAATTCCTTCCCAGTACAAACTGGCTTAAGCTTACAGTGTATCATTGTTCGGTGCATTGGACAATCGAAACATTATACACTGTAGGTTGCTAAACCACTATAATTCTACCTCCCTTGTGTTGAGCAGCGTTTGAAATAATGCACCACCTGTGGCATGGATTCAATTTCAGATACAAAGCTCCAGGGAAGAAGCTTTGATCTTAGTTTCCAGGAGGCCTAACAACTTAACATTTTCAGAACGAGAAAGTGCTTAACCTCATTCTGTTTGCTTATATTTTTAAGCCCCCTGATGTTCCAACTGCCGATATTATCCATATTGGCTGGAGGGAGTCACCCTCTCACATTCTTACCATTTTACCCAAGATCATTTAGTTGTTCCTCTTGTTCCGCTGCTTTATCATGTGCATCAGTTCCTTCCATATTCTTAAATACCATCCCCAGTAAGAACTATAGCTGGGCTTTTGACCATTTTGTTTTCCACCTGTTCCTCTTTTAACAAGTTGAAAACCATCTGCATCAGTCTGTTGAGTGTTCCGATTAGGCTTAGGAATCGAAGCTTCTTGTTCTGTTGGTTTCTGAACATCTTTAGCTACCCACATCTTCTTTTCCCTCTTGATACACCGAGTTACAGTATGTCCAATACCCTTACATGCCTCACATCTTATTGGTTTCCATTCATATATCACTTCCTGAGTTCCTGGCCCATTGTTACTCCTTTTTGTTATCTCAACTGCTATTCCACTATAGCTGCAGCGAACAACTTCTCACGTTTTGTTGTTGCTTGATCAGTCTTTGTGCGTGTGCCAATTAGGCCAGCCAACTTGAATAATCCTCTTCTCTCCCCAGTATCTAAGCTTTAGTTTAGGAAGTTGGATCCAAATAGGTACAGATTTCACCTCTCCTTTAACCAGATTCATATCAGGATTCCAATCTTTCATAATAAATGTTTTCTTTTCAAAGAATAGAACCCCCCTGTCAACACCTTGTTCTTACTCTCCATGGTTGTAAACCTCACCATATGTGTGCCATTACCCAGCTAAGCAACCTTATCCATACCCCATTTCCCCCAAAATTCTGCGCACATATCCGTTAATTACATGTTGCGGAGGGTTTCCCCCCATTACGCACGTATCCTTCAATTACATGTTGTGGAATTTGTGGATGGTTTCCCCCCAAAATAAAACAAAGAATGGATGAATTCCAGAATTCAATCTCTTCCTATATATTGTCAAAATCAATTTTGACTAGTGGAACAGTATTAATATCGTTTCCATCATTATTCCCTACAGTAAGATCAACAAAATTGTTATATGCACAGAATTCATTCTAATTTCAGAATTATGCTCAGAATTAATTCTAATTGCAGAAAGGATTTTCTCGGGTTACCTTCAACTTCCTCCATCCATGGAGTCTTCTGCCCGGAATTTCGATTCAGAACATCAATCCAGTTCGAGAATTGTTCTTTCTCCTTCGGATGTTCTTTTGGGTCAGTTCTTGGCACTCTTGAATCGGATTCCCATATTCATCTTCACTTGATAAATCTGGGACTGAAACAACCAACGTTGTTGTACCCAAAATTTCCACGATTGATCGACTTTTGACACTTTGCAAAGACTTCACAGATACATTGGCCTTCTCCTGGTCACCTTTCGAAGATTTCTTCTTCCCCATCAAGATTTCTGGCTATGGCTACGGGCTTATGCACCAAGAGAAAGTTTTGCGGGAGAGAGATAAAAAACCAGGGTTTATCTTTTTATAATTTTTACTAGTTTGTTCTTGCTAGTTGCTACTATTATTTTTGGTTTGTCGTTGACTTGCTTTGTAATTCTCTTTGTTTGGCAGGTGTATCTATGTGATATGTGATTGTTTTGTTGCTTTATGTATAGTTGTTTGAGACATTGAATTTGATTAATTAATGTCAAATGTAGAATTCTTACTATGTATTTGCCACTAATCATCAACTTGGTCAAGGTTGAACACTTAACATAAATCATAAGTTCATACTCCCACCGTCTCGTTTTACTTGCTCCAGTTGACCAATTTTTGTGAGAGTTTTTTTGGTCAAGTGGGGCAAATAAAATGAGACGGAGGGAGTAGCTACACATTAGAAAGCTGTGTTATGTAAAATTGGTATGCCGTTTTTGCAAGCTTATGTCATGTATGATGTATGGGCAATTCCTTTTAAGGAATCAAAAGCTAGGTAGAGTCTGGTTTACGATAATTATGTGTCTGGATATATTGTTTTATTGATGGGTTCTTTCAGATTGTTATAGTTAGAAAAACATCAAGCTCAGGTTTTGGGTTTCTTCCTTCTAATTATTTTTGCCTTGTTGCTTAGCTGTTCCACATTATAGTGCACCGGAGTACTACATTGTGCAGTGGCAAAATTATATTTTATGGACTATTTGATAGCTAAAGATTGAGTTTGTAATGTGCTTTTTCAAATTGTATTGTTAGAAAAGTGTTAAGTTTGGGGTCAGCAACTGGAATTTATTTCCTTCTTTTACTAAGTTACCTTGTTGCTGTGTTGTCTCAATTTGTTGTGCACGAAGTTTGAAAAATGTACAGTGCATTGACGTTAAAATATTTTGTTAATCTACTCCGTAGTCAATAGTTGAGGTAGAGTTTTTACGGCTCTTGAATTGCAGATTTGAGCAATTTATTAAATTGGAGATAAAGGTGTCTTATTTATTTTTATTTTACTTCCAATTCTGTGATCCAATTTTGAGGATCTCTCACAATCTGATTATCTCAATAAGATTTGATCATGCTGAAATTGGTTGAACTACACGGAACACCATATAAGTTTTTACTAGGTCTTAACAAATTCTAATGAACCATTTATAATTTCATTAGCTTTGGTTTTAAAGTTTTGAAGTGAAAATATTCCTTCTGCTTTCATACTTTATCAATTCTTTTAGTATCAGTATAGTTCCATTGTTGTGAGTGAACCTTGCATATACAATGGACTATCTCGCTCAGCTCCCAAGGGATCTACATGGAGTTACCCATCTAGGTTAAAGTTGCTTTGGGAAGTTTTGAAGGAAGGTCTGGGGTAGCCACTAGTCCACTACCATACACTAGTACATTTTATTTGTTTATTGCGAAGTTAAAAAGGGGCTAGTCTGTATGTGTGTATAAGAGAGAGTGAGAAAGACCGGTGCGAGAGAGGTTGGGGTGGGCAGGGAGTTGATATACAAGAATAGTAAGGCATAGAAGATGTGGATTGCATACAATTAATTGTGAAAAAAGACATGTTTTTATTTTGATATGTAAACTGTGTGTTGCACTATTTGGTAATTGGTTACAATGATTACCTTAAGACACTATGGTGTTAATTCCTGAGTCCTTGGTGTTTTGTTAGCTGAAATTATCCCTGTTTGATTTGTTATCGTTATTGTAGTCTATTTCAAGTGAAGAATTTTGAGTTGTATTACCGTAGATGATGAGTACAAAGGAGGAGCCACCACCATCGCTGCCAAAATTGATGACACTTACTAAGGGTTTAAAATTGGTAAGCATTTTGACTGATTTCTGTAAACCGTGTGCGTCATAGAAAGACAGGTTTGACATTGTCTAATATTGTCACTGCTCTGCTTATGTGTAGGCTGAAGAGTGGGTTAAGAATATGCCTGGAGATGTGGAGGAAGCAGTGGAAATTGAAATGGAATGTAGACCTTCTAGGTTGGTGCTTTTCCCCCATATCTTAGATTATTGCCTATTGAAGAGGAAGCTTATTAGAGTTAGGTTTTGTGTGTTTTTACCTTTTTAGGCTTGGTCTTGGGGCAAAAGTTCCACGAAGATCCCGAGTTGGGCCTTTAACTGATCCTGTAGAAAGAAGATTGCATAAGAAATTTGGTCTAGGCAGAAAGAAAGCGTCTGGTGATGAGGATTCCAATCCACCTCCAAAGAATGAAATAGATAATGATGATGACGACGACGAAGAAAATATAGATAGCAGAACTAATTCTTTTTCCAAGAAGAGAGCTGCTCCTCTCTCCAGAATACCGCAAGCAAAGAAGAAATTCAAGTAATTACTCATACTACTTATCTTTCTCGTTTGTCCTTTAATCATTTTGATGTATTAATTATTCCGATGATAATTGATAAATTATTGATTTAATGCCAACTCTCTGGAGATCTAGTATGACTCTCTGAAGTATTAACGCCCCAACCTCAGAAATGTTCCCCAAGGGATCTTATGCCAATTCCAGTTTCAGGTGCCTTTCTTGCCGTTATTTCCTTCCCGAATTGTGTCATTTTATCTCAAGTCCCTGTATAGCACATGTGAAGCTGATGTTTAAAATTCTGGCTATCCCTATTGTTTCAACTTGGACTATAACTTTCAAACATACCCCGGTATGATTTTTTTATTTGGTTTCAAGCTCAATGTTAGAGAACTTATAAACATAGCCTAAAGCGGTATCATATGGCTTCTGCCATCTTAAGTACAAGTGTGGAGGTCAACTAGTTGGTTGATGAATTCTTGAAGGGGTGGCACACAAGACCTGGGATTGAATCTCGTTTACATCATTTTTCGCCTTGCCCTTAATAGCTCTCTACACACACAAAATTACAAAATCTAAACGAGCCATTCTAATTGATTTAAGTTGTAGAGTACTACATCCACTTCTTGCAAATTCATCCTATTTCGTCTCGTCTTGTATTTCTTACTTGTTAAAATCATAATATGTAGCCGATGATTTAATCTAAATCACATGATTACAATAGATGTGACTAAATTTAAGTTCATGATACAATATAAATCATGTGACTTTTAAATCATAAAATCAAAAATTGAAAACTGAAATTAAACAAACCCTAAGGCCTCG

mRNA sequence

TGATTTCTAGGTAAAATTTCGCTGTTTTCCTCTTCAATTCCATCCAGTTTTTCATGGCTATTCAACTTCAAGTCGAATAGTGCTCTCAAGGAGAGGTAGGAACTTTCTCACGAGGACGAATCTCCCAAGGACAACTGTCTATTTCAAGTGAAGAATTTTGAGTTGTATTACCGTAGATGATGAGTACAAAGGAGGAGCCACCACCATCGCTGCCAAAATTGATGACACTTACTAAGGGTTTAAAATTGGCTGAAGAGTGGGTTAAGAATATGCCTGGAGATGTGGAGGAAGCAGTGGAAATTGAAATGGAATGTAGACCTTCTAGGCTTGGTCTTGGGGCAAAAGTTCCACGAAGATCCCGAGTTGGGCCTTTAACTGATCCTGTAGAAAGAAGATTGCATAAGAAATTTGGTCTAGGCAGAAAGAAAGCGTCTGGTGATGAGGATTCCAATCCACCTCCAAAGAATGAAATAGATAATGATGATGACGACGACGAAGAAAATATAGATAGCAGAACTAATTCTTTTTCCAAGAAGAGAGCTGCTCCTCTCTCCAGAATACCGCAAGCAAAGAAGAAATTCAAGTAATTACTCATACTACTTATCTTTCTCGTTTGTCCTTTAATCATTTTGATGTATTAATTATTCCGATGATAATTGATAAATTATTGATTTAATGCCAACTCTCTGGAGATCTAGTATGACTCTCTGAAGTATTAACGCCCCAACCTCAGAAATGTTCCCCAAGGGATCTTATGCCAATTCCAGTTTCAGGTGCCTTTCTTGCCGTTATTTCCTTCCCGAATTGTGTCATTTTATCTCAAGTCCCTGTATAGCACATGTGAAGCTGATGTTTAAAATTCTGGCTATCCCTATTGTTTCAACTTGGACTATAACTTTCAAACATACCCCGGTATGATTTTTTTATTTGGTTTCAAGCTCAATGTTAGAGAACTTATAAACATAGCCTAAAGCGGTATCATATGGCTTCTGCCATCTTAAGTACAAGTGTGGAGGTCAACTAGTTGGTTGATGAATTCTTGAAGGGGTGGCACACAAGACCTGGGATTGAATCTCGTTTACATCATTTTTCGCCTTGCCCTTAATAGCTCTCTACACACACAAAATTACAAAATCTAAACGAGCCATTCTAATTGATTTAAGTTGTAGAGTACTACATCCACTTCTTGCAAATTCATCCTATTTCGTCTCGTCTTGTATTTCTTACTTGTTAAAATCATAATATGTAGCCGATGATTTAATCTAAATCACATGATTACAATAGATGTGACTAAATTTAAGTTCATGATACAATATAAATCATGTGACTTTTAAATCATAAAATCAAAAATTGAAAACTGAAATTAAACAAACCCTAAGGCCTCG

Coding sequence (CDS)

ATGATGAGTACAAAGGAGGAGCCACCACCATCGCTGCCAAAATTGATGACACTTACTAAGGGTTTAAAATTGGCTGAAGAGTGGGTTAAGAATATGCCTGGAGATGTGGAGGAAGCAGTGGAAATTGAAATGGAATGTAGACCTTCTAGGCTTGGTCTTGGGGCAAAAGTTCCACGAAGATCCCGAGTTGGGCCTTTAACTGATCCTGTAGAAAGAAGATTGCATAAGAAATTTGGTCTAGGCAGAAAGAAAGCGTCTGGTGATGAGGATTCCAATCCACCTCCAAAGAATGAAATAGATAATGATGATGACGACGACGAAGAAAATATAGATAGCAGAACTAATTCTTTTTCCAAGAAGAGAGCTGCTCCTCTCTCCAGAATACCGCAAGCAAAGAAGAAATTCAAGTAA

Protein sequence

MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRRSRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKKRAAPLSRIPQAKKKFK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16576.1	Spo16576.1	mRNA

Homology

[Close]

BLAST of Spo16576.1 vs. NCBI nr
Match: gi|902232286|gb|KNA22549.1| (hypothetical protein SOVF_032970 isoform A [Spinacia oleracea])

HSP 1 Score: 261.5 bits (667), Expect = 8.000e-67
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 1


		  
Query: 1   MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR 60
           MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR
Sbjct: 1   MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR 60

Query: 61  SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK 120
           SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK
Sbjct: 61  SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK 120

Query: 121 RAAPLSRIPQAKKKFK 137
           RAA LSRIPQAKKKFK
Sbjct: 121 RAAALSRIPQAKKKFK 136

[Close]

BLAST of Spo16576.1 vs. NCBI nr
Match: gi|902232287|gb|KNA22550.1| (hypothetical protein SOVF_032970 isoform B [Spinacia oleracea])

HSP 1 Score: 260.4 bits (664), Expect = 1.800e-66
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 1


		  
Query: 1   MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR 60
           MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR
Sbjct: 1   MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR 60

Query: 61  SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK 120
           SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK
Sbjct: 61  SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK 120

Query: 121 RAAPLSRIPQAKKKF 136
           RAA LSRIPQAKKKF
Sbjct: 121 RAAALSRIPQAKKKF 135

[Close]

BLAST of Spo16576.1 vs. NCBI nr
Match: gi|902237054|gb|KNA24636.1| (hypothetical protein SOVF_013840 [Spinacia oleracea])

HSP 1 Score: 232.3 bits (591), Expect = 5.200e-58
Identity = 122/136 (89.71%), Postives = 126/136 (92.65%), Query Frame = 1


		  
Query: 3   STKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRRSR 62
           STK EPPPSLPKLMTLTKGLKLAE+WVKNMPGDVEEAVEIE ECRPSRLGLGAKVPRRS+
Sbjct: 8   STKVEPPPSLPKLMTLTKGLKLAEQWVKNMPGDVEEAVEIETECRPSRLGLGAKVPRRSQ 67

Query: 63  VGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEI--DNDDDDDEENIDSRTNSFSKK 122
           VGPLTDPVERRLH KFGL RKK +GDE SNPPPKNEI  DNDDDDD+ENIDSRTNSFSKK
Sbjct: 68  VGPLTDPVERRLHNKFGLSRKKTAGDEVSNPPPKNEIDNDNDDDDDDENIDSRTNSFSKK 127

Query: 123 RAAPLSRIPQAKKKFK 137
           R APLSRI QAKKKFK
Sbjct: 128 RVAPLSRIQQAKKKFK 143

[Close]

BLAST of Spo16576.1 vs. NCBI nr
Match: gi|731365919|ref|XP_010694782.1| (PREDICTED: uncharacterized protein LOC104907543 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 202.2 bits (513), Expect = 5.700e-49
Identity = 103/135 (76.30%), Postives = 119/135 (88.15%), Query Frame = 1


		  
Query: 2   MSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRRS 61
           MSTKEEPPPSLPKLMTL KGLKLA++WVKNMPGD+EE  ++E+E RPSRLGLGAKVPR+S
Sbjct: 1   MSTKEEPPPSLPKLMTLNKGLKLAQQWVKNMPGDLEEVEDMEVEGRPSRLGLGAKVPRKS 60

Query: 62  RVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKKR 121
            VGP  DPVERRLHKKFG GRKK++ D+DS    KNEID DD+DD+EN+DSRTN+F+KKR
Sbjct: 61  HVGPFNDPVERRLHKKFGAGRKKSADDDDSILSAKNEIDIDDEDDDENLDSRTNAFAKKR 120

Query: 122 AAPLSRIPQAKKKFK 137
           AAPL+  PQAKKKFK
Sbjct: 121 AAPLNLTPQAKKKFK 135

[Close]

BLAST of Spo16576.1 vs. NCBI nr
Match: gi|731350856|ref|XP_010686727.1| (PREDICTED: uncharacterized protein LOC104900894 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 202.2 bits (513), Expect = 5.700e-49
Identity = 101/135 (74.81%), Postives = 119/135 (88.15%), Query Frame = 1


		  
Query: 2   MSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRRS 61
           MS KEEPPPSLPKLMTL KGLKLAE+WVKNM GDV+E  ++E+E RPSRLGLGAKVPR+S
Sbjct: 1   MSMKEEPPPSLPKLMTLNKGLKLAEQWVKNMTGDVDEVEDVELEGRPSRLGLGAKVPRKS 60

Query: 62  RVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKKR 121
            VGP  DPVERRLHKKFG GRK+++ D+DS P  KNEIDND++DD+EN+DSR+N+F+KKR
Sbjct: 61  HVGPFNDPVERRLHKKFGAGRKRSADDDDSVPSTKNEIDNDEEDDDENLDSRSNAFAKKR 120

Query: 122 AAPLSRIPQAKKKFK 137
           AAPL+  PQAKKKFK
Sbjct: 121 AAPLNPTPQAKKKFK 135

[Close]

BLAST of Spo16576.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUE5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_032970 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 5.600e-67
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 1


		  
Query: 1   MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR 60
           MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR
Sbjct: 1   MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR 60

Query: 61  SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK 120
           SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK
Sbjct: 61  SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK 120

Query: 121 RAAPLSRIPQAKKKFK 137
           RAA LSRIPQAKKKFK
Sbjct: 121 RAAALSRIPQAKKKFK 136

[Close]

BLAST of Spo16576.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSN8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_032970 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.200e-66
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 1


		  
Query: 1   MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR 60
           MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR
Sbjct: 1   MMSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRR 60

Query: 61  SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK 120
           SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK
Sbjct: 61  SRVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKK 120

Query: 121 RAAPLSRIPQAKKKF 136
           RAA LSRIPQAKKKF
Sbjct: 121 RAAALSRIPQAKKKF 135

[Close]

BLAST of Spo16576.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYR1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_013840 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.600e-58
Identity = 122/136 (89.71%), Postives = 126/136 (92.65%), Query Frame = 1


		  
Query: 3   STKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRRSR 62
           STK EPPPSLPKLMTLTKGLKLAE+WVKNMPGDVEEAVEIE ECRPSRLGLGAKVPRRS+
Sbjct: 8   STKVEPPPSLPKLMTLTKGLKLAEQWVKNMPGDVEEAVEIETECRPSRLGLGAKVPRRSQ 67

Query: 63  VGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEI--DNDDDDDEENIDSRTNSFSKK 122
           VGPLTDPVERRLH KFGL RKK +GDE SNPPPKNEI  DNDDDDD+ENIDSRTNSFSKK
Sbjct: 68  VGPLTDPVERRLHNKFGLSRKKTAGDEVSNPPPKNEIDNDNDDDDDDENIDSRTNSFSKK 127

Query: 123 RAAPLSRIPQAKKKFK 137
           R APLSRI QAKKKFK
Sbjct: 128 RVAPLSRIQQAKKKFK 143

[Close]

BLAST of Spo16576.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BDT3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095670 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.000e-49
Identity = 103/135 (76.30%), Postives = 119/135 (88.15%), Query Frame = 1


		  
Query: 2   MSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRRS 61
           MSTKEEPPPSLPKLMTL KGLKLA++WVKNMPGD+EE  ++E+E RPSRLGLGAKVPR+S
Sbjct: 1   MSTKEEPPPSLPKLMTLNKGLKLAQQWVKNMPGDLEEVEDMEVEGRPSRLGLGAKVPRKS 60

Query: 62  RVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKKR 121
            VGP  DPVERRLHKKFG GRKK++ D+DS    KNEID DD+DD+EN+DSRTN+F+KKR
Sbjct: 61  HVGPFNDPVERRLHKKFGAGRKKSADDDDSILSAKNEIDIDDEDDDENLDSRTNAFAKKR 120

Query: 122 AAPLSRIPQAKKKFK 137
           AAPL+  PQAKKKFK
Sbjct: 121 AAPLNLTPQAKKKFK 135

[Close]

BLAST of Spo16576.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWA7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g185080 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.000e-49
Identity = 101/135 (74.81%), Postives = 119/135 (88.15%), Query Frame = 1


		  
Query: 2   MSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEEAVEIEMECRPSRLGLGAKVPRRS 61
           MS KEEPPPSLPKLMTL KGLKLAE+WVKNM GDV+E  ++E+E RPSRLGLGAKVPR+S
Sbjct: 1   MSMKEEPPPSLPKLMTLNKGLKLAEQWVKNMTGDVDEVEDVELEGRPSRLGLGAKVPRKS 60

Query: 62  RVGPLTDPVERRLHKKFGLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSKKR 121
            VGP  DPVERRLHKKFG GRK+++ D+DS P  KNEIDND++DD+EN+DSR+N+F+KKR
Sbjct: 61  HVGPFNDPVERRLHKKFGAGRKRSADDDDSVPSTKNEIDNDEEDDDENLDSRSNAFAKKR 120

Query: 122 AAPLSRIPQAKKKFK 137
           AAPL+  PQAKKKFK
Sbjct: 121 AAPLNPTPQAKKKFK 135

[Close]

BLAST of Spo16576.1 vs. TAIR (Arabidopsis)
Match: AT3G61370.1 (Protein of unknown function (DUF3245))

HSP 1 Score: 61.6 bits (148), Expect = 4.300e-10
Identity = 44/122 (36.07%), Postives = 70/122 (57.38%), Query Frame = 1


		  
Query: 2   MSTKEEPPPSLPKLMTLTKGLKLAEEWVKNMPGDVEE-AVEIEMECRPSRLGLGAKVPRR 61
           M+T+       P++    K  KLAE+WV +M    E+  +E   E RP RLGLGA+V R+
Sbjct: 1   MTTETAKKKGTPQIFKTDKAQKLAEKWVASMTRPTEDDPIETAQEERPHRLGLGAQVSRQ 60

Query: 62  SRVGPLTDPVERRLHKKF-GLGRKKASGDEDSNPPPKNEIDNDDDDDEENIDSRTNSFSK 121
           ++  P  DP++++L  KF  + RK A    ++    KN  D+ +DDDE   +S++ +F K
Sbjct: 61  TKRRPSDDPLDQKLEAKFAAVKRKNARLVAEAAGSSKNAGDDSEDDDES--ESKSQAFGK 120

The following BLAST results are available for this feature:

BLAST of Spo16576.1 vs. NCBI nr
BLAST of Spo16576.1 vs. UniProtKB/TrEMBL
BLAST of Spo16576.1 vs. ExPASy Swiss-Prot
BLAST of Spo16576.1 vs. TAIR (Arabidopsis)

BLAST of Spo16576.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902232286\|gb\|KNA22549.1\|	8.0e-67	99.2	hypothetical protein SOVF_0329...	[more]
gi\|902232287\|gb\|KNA22550.1\|	1.8e-66	99.2	hypothetical protein SOVF_0329...	[more]
gi\|902237054\|gb\|KNA24636.1\|	5.2e-58	89.7	hypothetical protein SOVF_0138...	[more]
gi\|731365919\|ref\|XP_010694782.1\|	5.7e-49	76.3	PREDICTED: uncharacterized pro...	[more]
gi\|731350856\|ref\|XP_010686727.1\|	5.7e-49	74.8	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo16576.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RUE5_SPIOL	5.6e-67	99.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9RSN8_SPIOL	1.2e-66	99.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9RYR1_SPIOL	3.6e-58	89.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8BDT3_BETVU	4.0e-49	76.3	Uncharacterized protein OS=Bet...	[more]
A0A0J8BWA7_BETVU	4.0e-49	74.8	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo16576.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo16576.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G61370.1	4.3e-10	36.0	Protein of unknown function (D...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021641	Protein of unknown function DUF3245	PFAM	PF11595	DUF3245	coord: 16..133 score: 1.
None	No IPR available	PANTHER	PTHR35741	FAMILY NOT NAMED	coord: 1..136 score: 2.8
None	No IPR available	PANTHER	PTHR35741:SF1	SUBFAMILY NOT NAMED	coord: 1..136 score: 2.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0009408	response to heat
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0035265	organ growth
biological_process	GO:0032984	protein-containing complex disassembly
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0010304	PSII associated light-harvesting complex II catabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0051301	cell division
biological_process	GO:0071554	cell wall organization or biogenesis
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004674	protein serine/threonine kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo18285	0.75	Barchart \| Table
Spo24430	0.74	Barchart \| Table
Spo11276	0.73	Barchart \| Table
Spo15130	0.72	Barchart \| Table
Spo17980	0.71	Barchart \| Table
Spo01187	0.70	Barchart \| Table
Spo05307	0.70	Barchart \| Table
Spo06811	0.69	Barchart \| Table
Spo15531	0.69	Barchart \| Table
Spo13161	0.69	Barchart \| Table
Spo15234	0.68	Barchart \| Table
Spo02396	0.68	Barchart \| Table
Spo01196	0.68	Barchart \| Table
Spo23332	0.68	Barchart \| Table
Spo00943	0.67	Barchart \| Table
Spo01363	0.67	Barchart \| Table
Spo09387	0.67	Barchart \| Table
Spo09589	0.67	Barchart \| Table
Spo19497	0.67	Barchart \| Table
Spo23745	0.67	Barchart \| Table
Spo25573	0.67	Barchart \| Table
Spo25575	0.67	Barchart \| Table
Spo18943	0.66	Barchart \| Table
Spo21823	0.66	Barchart \| Table
Spo22694	0.66	Barchart \| Table
Spo15995	0.66	Barchart \| Table
Spo18605	0.66	Barchart \| Table
Spo08407	0.66	Barchart \| Table
Spo23400	0.66	Barchart \| Table
Spo18130	0.66	Barchart \| Table
Spo23237	0.65	Barchart \| Table
Spo15524	0.65	Barchart \| Table
Spo24697	0.65	Barchart \| Table