Spo16603 (gene)

Overview
NameSpo16603
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00340 : 221195 .. 221972 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATGTAGGCTCTAACTTTATTTACTTCACTAAGGCCCAACAAACTAACAGCCCAAAGGAAAAACCCTAAAAAAACCCCTTCTCATGTTGCCAGCCGACATATATATGTATAGCAAATGAAACTTTAGAAGCATATTTCTCACTCTCTCCATCCATCGCCTGCTCTTATCTCTCCCATCTTTCTTACAAATTTGTTCTTAAGTTCCCTTTTGCCACTGTTAATTCATGGTTTTCTGATATTTCCTTATTGTTTGTAGATTGTTTGCTCAAATATGCTCCCCTTCTCTCTTCTTTTTCTAAGGTAATACGAAGTGTTAGTTTTGTTTGTTTGATTCCTTTTATCATTGATTTTATTTATTTGATGAGGAAAAGATTTGATTTTTTTCTAGTTTCTAATGGATTAATGTATTATGAATCATAATTAAGCAAAACATATCATTTTATTTAATCCCTTCAATTTTTATTCGTTCTCTTTAAAGTTTTATTAATTTTATACATTCTCATTTTCTCAGGTAGTCTATTTGCAATAAGGGGTGCTTCAAGCGTTTGGAAACAAGATGAAGATTTTTACAAACTGAAACGTCTAATTAAACACCTGAAAAGTCTAGATTATTTGTAATCTAAGGTTTTTGAACCATTTATTTGGTCTGTAACATATTGGAATTCGTTGGAAAAAACTATATTTTTTTGGCCATTAATTGATTTAACGAAATTATTAATCGTTTATTTAGTATTTCTCTCAATAATTTTTTTTAATTGGGTTGAAAAAGATGAC

mRNA sequence

ATGATATCAAATGAAACTTTAGAAGCATATTTCTCACTCTCTCCATCCATCGCCTGCTCTTATCTCTCCCATCTTTCTTACAAATTTGTTCTTAAGTTCCCTTTTGCCACTGTTAATTCATGGTTTTCTGATATTTCCTTATTGTTTGTAGATTGTTTGCTCAAATATGCTCCCCTTCTCTCTTCTTTTTCTAAGGTAATACGAAGTAGTCTATTTGCAATAAGGGGTGCTTCAAGCGTTTGGAAACAAGATGAAGATTTTTACAAACTGAAACGTCTAATTAAACACCTGAAAAGTCTAGATTATTTGTAATCTAAGGTTTTTGAACCATTTATTTGGTCTGTAACATATTGGAATTCGTTGGAAAAAACTATATTTTTTTGGCCATTAATTGATTTAACGAAATTATTAATCGTTTATTTAGTATTTCTCTCAATAATTTTTTTTAATTGGGTTGAAAAAGATGAC

Coding sequence (CDS)

ATGATATCAAATGAAACTTTAGAAGCATATTTCTCACTCTCTCCATCCATCGCCTGCTCTTATCTCTCCCATCTTTCTTACAAATTTGTTCTTAAGTTCCCTTTTGCCACTGTTAATTCATGGTTTTCTGATATTTCCTTATTGTTTGTAGATTGTTTGCTCAAATATGCTCCCCTTCTCTCTTCTTTTTCTAAGGTAATACGAAGTAGTCTATTTGCAATAAGGGGTGCTTCAAGCGTTTGGAAACAAGATGAAGATTTTTACAAACTGAAACGTCTAATTAAACACCTGAAAAGTCTAGATTATTTGTAA

Protein sequence

MISNETLEAYFSLSPSIACSYLSHLSYKFVLKFPFATVNSWFSDISLLFVDCLLKYAPLLSSFSKVIRSSLFAIRGASSVWKQDEDFYKLKRLIKHLKSLDYL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16603.1Spo16603.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo16603.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16603.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16603.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16603.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0000774 adenyl-nucleotide exchange factor activity
molecular_function GO:0051087 chaperone binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0008865 fructokinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo024000.66Barchart | Table
Spo141590.66Barchart | Table
Spo253570.66Barchart | Table