Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAAATAAGTAAAATTTGGTGGCTGCATGTTATTTGGTACTTGTATAATTTATAGTGGAACCCGCAGCCATAAACCATTAACCCACCAAAGACTTTTCGCCAAAAAATCTATCCCCATTTTCCACCTCTATATTACCTCGTCATCTTCTCCATTTTTTTTTGAAGAAAGAGAAATTGGTAAACCCAATAAAAATGAGAACCGGGTATATTGTAATCGGGTTAGTTTGTATAGTGATTTTAACATGGGTATGGAAAATGATAAATTGGTTATGGTTTAATCCCAGAAAGTTGGAAAAGCTTCTCAGAAAACAGGGTTTGAAAGGGAATTCATACAAGTTTTTGTACGGAGATATCAAAGAAACCTTCAAAATGCGTAGTGAAGCAAGAGAAAAGCCTATTCCTTTTACCAATGATTACGTTTCCCGTATTTTGCCGTTTCTTCATCAACATGTTCACAAATATGGTTAGTTTAACTGTTTCTCTCTCTTCTCAATTTAGAAAAATAAATGATTTGTGGAGTTTTGGCTGTTCCAGGTATTGGTTTCGTCAATTAGTTGGTAAATTAATTGAAGATTAATTTAATACTTATTTCAATTATAAATTCTACTTGTCCAACTTTTTTTTTTTCTTTTTTTTGGGGAACTTAGGTTGTCTAAATTTAACTGAATTTGTTTGAAATTATCTAAACTTATTTTTACTGAAATAAGTGGAAATAAGGCGAACTGGGAACATAGTTGAGCTTAAGTGGCACTGATCAAGTTAATATATAGTTGATTAATAGTGGAATTATTCATTCAATACTAAATTAATACCATGTTTAAATTAAATTATTCCTAAATATAACCACATATGCTAAATTAGTAGTCTGTATATGCTAAATTAGTAGTTTTTTGGTTAAAAAGGGCTGATACTGAACTGGGCAAAATTTGATATGAAATCCTATACATCTACTCTGGTATACTGATTACTGACAATGCTGTATTAGACTTTATGTTAATTGAACTTTTCATATCACCTCAAGTACCAACATCAGCATGGATGCTCAATCCCACAGTCTAACATAAGTAGTCGAGTAGAGCACTTTAACACTTCATTTTTATGCCAAAATCATGGAAAACTAGTACAAAAAAGCCAAGTCACACACTTGAAAACATACCTGTATCGGACATGATAGTCCAAGTAACATAGATATTAGTGCAGTTTGTGGCTGTCTAATGTCTATATACCGCATAAAAAATAGTGGAAAGGGAAAGGGAAAGGGAAAGAGAAAAGGTTTACTTGGTCATCACAAAATAGAATAGTGCATTAAGTAATAGAATTTGCCCCAGAAGGCTACAATGAGACAATGTGCAGTGTGCCTGCTGAGTTGAGTTCTGAAGTTGAATTTGAGAAGATAGGACAAATGTGCAAAAACTAAATTGGGTGTACCTAGTTCGGTTAGTAAGTGTAATTGGGTACATAATAGATTAGTAGAGGTTCTCAAGTAATCCAAGTTAGTCTAGTTTTTATTACATTAAAGTAGAAAATACTCCTTATGTTACAAGTATAAAAAATTGGAGGGATTCATTTACTTTCCGATTCAAGGCGTTGTATTTGTTAAGAGTCATGGTAAGAATTGGAAGCTTAATTAAGATATGCATATTGTGATCGTTTACTCTTGTTTGAGAAGAAGTGTTCCCTTTGTTTACTTAATTTCTTAAAACAAGTAGTCTAGGACTATCAGTTATGTCATGAAGTTGTTCAAAGTTAGATTTTGATTGTAAAATGTTGGAATATTTGATGGAAAATATGAGAGTAAATGCAGGTGAAAATTGTTGGACATGGCTAGGGCCTGTACCAATTATAAATATTGCAGAACCAGAGCTAATAAGGGATGCTCTGAATAGGATGAATGAATTTCAGAAGGCAAAACTGAACCCACTTGTTGGGTTGCTTGTCCCTGGACTTGTAGGCTATGAGGGTGAAAAATGGGCGAAACACAGGAAACTGATCAATCCTGCTTTTCATACTGAAAAGCTTAAGGTATGTAATTGTTCTGAACAAGTATTGAATTCAGCGGCCCATTCTTTAATAAGTTTTTGATAGTATTGACCTTTTATGTAGCTTATGCTCCCAGCATTTAGGGACAGTAGTATTGATATGGTGAAGGAGTGGGAGAAGATAGTTTCTGAAACAGGTTCCTCTGAGGTAGATGTTTGGCCACACCTTATTACCCTATCTGCAGATGTTATCTCTCGAGCTGCATTTGGTAGTAGCTATAAGGAGGGAAGAAGGATATTTGAACTTCTTAAGGAACAGACGCAAATTACCTTACGCCTTTTCCAATCAGTTTATATCCCTGGATGGAGGTAATTAGTTATAGAGTGCTCTATTATTGCACTTGGGAATTTAAGTTTTGAACATTTTACAAAAAATAATAGCATTGAAATTCATAGGTTCGTGCCAACAAAGACCAACAGGAGGATGAAAGAAATGAATTCTGCTATACAAAATTTGTTGACGGAAATAATTGACAAGAGAAAGAAGGCAATGGAAGCAGGTGAATCTCCAAAGGATGACTTATTGGGGATATTGATGGACTCCAACTTTAAAGCGTCTCAAAGTATTGGGAGTCAAAAACAACAACAAGCCATGAGTTTCCAGGATATGATTGATGAGTGTAAGCTGTTCTACTTTGCTGGACAAGAGACAACCTCGGTGTTGCTAGTATGGACAATGATTTTGTTGAGCAAGCACCAAGATTGGCAAACACGTGCACGAGAAGAAGTGCTCGCAACATTTGGAACAAATCAACCAGACTTGGAAGGGTTAAATCGTTTGAAGATAGTAAGTGCTTGCGTTCAATTCATTTATGCTTATTTGATGGTTGCATTGTTGTTAATTATATTTGTTTGAGTTTGTTGTAGGTGACTACGATACTGTATGAGGTGCTAAGATTGTACCCACCAGTGGTTACAACATCCCGTAGGATATATCAGGGTGATATGAAACTTGGAAATATAGTGGTACCTCGTGGTGCAATGGTTAGTTTGTCAATAATCAATACACACCACGATCCTAGACTTTGGGGTGATGATGCAAACGAATTTAAACCAGATAGATTTTCAGAAGGGATTGCAAAGGCAACCAAGGGTAATATATCATTCTTTCCCTTTGGTTGGGGACCGCGGATTTGCATTGGACAGAACTTTGCAATTGCTGAAGCTAAAATGGCAGTGTCCATCATTTTGCAGCGTTTCTCTTTCGAGCTGTCACCGTCCTATACCCATGCTCCTACCACGGTTATAACTCTTCAGCCCCAACATGGTGCTCATCTCATTTTACACCGGCTTCCTAGTTGTGACTAGTTAGTTGGTACTTCAAGTTCTATAAAACATAAGTGTATTGTACGTACACATAAGTTACGTACTGTATACATTCATGTATATGATTCGGCGATTATCTTGTAGGCTCTAGTATACATGAAAGAATGTATCCATCTCTACGGAAGATGTTGCTGATGCGCGTTTGA ATAAATAAGTAAAATTTGGTGGCTGCATGTTATTTGGTACTTGTATAATTTATAGTGGAACCCGCAGCCATAAACCATTAACCCACCAAAGACTTTTCGCCAAAAAATCTATCCCCATTTTCCACCTCTATATTACCTCGTCATCTTCTCCATTTTTTTTTGAAGAAAGAGAAATTGGTAAACCCAATAAAAATGAGAACCGGGTATATTGTAATCGGGTTAGTTTGTATAGTGATTTTAACATGGGTATGGAAAATGATAAATTGGTTATGGTTTAATCCCAGAAAGTTGGAAAAGCTTCTCAGAAAACAGGGTTTGAAAGGGAATTCATACAAGTTTTTGTACGGAGATATCAAAGAAACCTTCAAAATGCGTAGTGAAGCAAGAGAAAAGCCTATTCCTTTTACCAATGATTACGTTTCCCGTATTTTGCCGTTTCTTCATCAACATGTTCACAAATATGGTGAAAATTGTTGGACATGGCTAGGGCCTGTACCAATTATAAATATTGCAGAACCAGAGCTAATAAGGGATGCTCTGAATAGGATGAATGAATTTCAGAAGGCAAAACTGAACCCACTTGTTGGGTTGCTTGTCCCTGGACTTGTAGGCTATGAGGGTGAAAAATGGGCGAAACACAGGAAACTGATCAATCCTGCTTTTCATACTGAAAAGCTTAAGCTTATGCTCCCAGCATTTAGGGACAGTAGTATTGATATGGTGAAGGAGTGGGAGAAGATAGTTTCTGAAACAGGTTCCTCTGAGGTAGATGTTTGGCCACACCTTATTACCCTATCTGCAGATGTTATCTCTCGAGCTGCATTTGGTAGTAGCTATAAGGAGGGAAGAAGGATATTTGAACTTCTTAAGGAACAGACGCAAATTACCTTACGCCTTTTCCAATCAGTTTATATCCCTGGATGGAGGTTCGTGCCAACAAAGACCAACAGGAGGATGAAAGAAATGAATTCTGCTATACAAAATTTGTTGACGGAAATAATTGACAAGAGAAAGAAGGCAATGGAAGCAGGTGAATCTCCAAAGGATGACTTATTGGGGATATTGATGGACTCCAACTTTAAAGCGTCTCAAAGTATTGGGAGTCAAAAACAACAACAAGCCATGAGTTTCCAGGATATGATTGATGAGTGTAAGCTGTTCTACTTTGCTGGACAAGAGACAACCTCGGTGTTGCTAGTATGGACAATGATTTTGTTGAGCAAGCACCAAGATTGGCAAACACGTGCACGAGAAGAAGTGCTCGCAACATTTGGAACAAATCAACCAGACTTGGAAGGGTTAAATCGTTTGAAGATAGTGACTACGATACTGTATGAGGTGCTAAGATTGTACCCACCAGTGGTTACAACATCCCGTAGGATATATCAGGGTGATATGAAACTTGGAAATATAGTGGTACCTCGTGGTGCAATGGTTAGTTTGTCAATAATCAATACACACCACGATCCTAGACTTTGGGGTGATGATGCAAACGAATTTAAACCAGATAGATTTTCAGAAGGGATTGCAAAGGCAACCAAGGGTAATATATCATTCTTTCCCTTTGGTTGGGGACCGCGGATTTGCATTGGACAGAACTTTGCAATTGCTGAAGCTAAAATGGCAGTGTCCATCATTTTGCAGCGTTTCTCTTTCGAGCTGTCACCGTCCTATACCCATGCTCCTACCACGGTTATAACTCTTCAGCCCCAACATGGTGCTCATCTCATTTTACACCGGCTTCCTAGTTGCTCTAGTATACATGAAAGAATGTATCCATCTCTACGGAAGATGTTGCTGATGCGCGTTTGA ATGAGAACCGGGTATATTGTAATCGGGTTAGTTTGTATAGTGATTTTAACATGGGTATGGAAAATGATAAATTGGTTATGGTTTAATCCCAGAAAGTTGGAAAAGCTTCTCAGAAAACAGGGTTTGAAAGGGAATTCATACAAGTTTTTGTACGGAGATATCAAAGAAACCTTCAAAATGCGTAGTGAAGCAAGAGAAAAGCCTATTCCTTTTACCAATGATTACGTTTCCCGTATTTTGCCGTTTCTTCATCAACATGTTCACAAATATGGTGAAAATTGTTGGACATGGCTAGGGCCTGTACCAATTATAAATATTGCAGAACCAGAGCTAATAAGGGATGCTCTGAATAGGATGAATGAATTTCAGAAGGCAAAACTGAACCCACTTGTTGGGTTGCTTGTCCCTGGACTTGTAGGCTATGAGGGTGAAAAATGGGCGAAACACAGGAAACTGATCAATCCTGCTTTTCATACTGAAAAGCTTAAGCTTATGCTCCCAGCATTTAGGGACAGTAGTATTGATATGGTGAAGGAGTGGGAGAAGATAGTTTCTGAAACAGGTTCCTCTGAGGTAGATGTTTGGCCACACCTTATTACCCTATCTGCAGATGTTATCTCTCGAGCTGCATTTGGTAGTAGCTATAAGGAGGGAAGAAGGATATTTGAACTTCTTAAGGAACAGACGCAAATTACCTTACGCCTTTTCCAATCAGTTTATATCCCTGGATGGAGGTTCGTGCCAACAAAGACCAACAGGAGGATGAAAGAAATGAATTCTGCTATACAAAATTTGTTGACGGAAATAATTGACAAGAGAAAGAAGGCAATGGAAGCAGGTGAATCTCCAAAGGATGACTTATTGGGGATATTGATGGACTCCAACTTTAAAGCGTCTCAAAGTATTGGGAGTCAAAAACAACAACAAGCCATGAGTTTCCAGGATATGATTGATGAGTGTAAGCTGTTCTACTTTGCTGGACAAGAGACAACCTCGGTGTTGCTAGTATGGACAATGATTTTGTTGAGCAAGCACCAAGATTGGCAAACACGTGCACGAGAAGAAGTGCTCGCAACATTTGGAACAAATCAACCAGACTTGGAAGGGTTAAATCGTTTGAAGATAGTGACTACGATACTGTATGAGGTGCTAAGATTGTACCCACCAGTGGTTACAACATCCCGTAGGATATATCAGGGTGATATGAAACTTGGAAATATAGTGGTACCTCGTGGTGCAATGGTTAGTTTGTCAATAATCAATACACACCACGATCCTAGACTTTGGGGTGATGATGCAAACGAATTTAAACCAGATAGATTTTCAGAAGGGATTGCAAAGGCAACCAAGGGTAATATATCATTCTTTCCCTTTGGTTGGGGACCGCGGATTTGCATTGGACAGAACTTTGCAATTGCTGAAGCTAAAATGGCAGTGTCCATCATTTTGCAGCGTTTCTCTTTCGAGCTGTCACCGTCCTATACCCATGCTCCTACCACGGTTATAACTCTTCAGCCCCAACATGGTGCTCATCTCATTTTACACCGGCTTCCTAGTTGCTCTAGTATACATGAAAGAATGTATCCATCTCTACGGAAGATGTTGCTGATGCGCGTTTGA MRTGYIVIGLVCIVILTWVWKMINWLWFNPRKLEKLLRKQGLKGNSYKFLYGDIKETFKMRSEAREKPIPFTNDYVSRILPFLHQHVHKYGENCWTWLGPVPIINIAEPELIRDALNRMNEFQKAKLNPLVGLLVPGLVGYEGEKWAKHRKLINPAFHTEKLKLMLPAFRDSSIDMVKEWEKIVSETGSSEVDVWPHLITLSADVISRAAFGSSYKEGRRIFELLKEQTQITLRLFQSVYIPGWRFVPTKTNRRMKEMNSAIQNLLTEIIDKRKKAMEAGESPKDDLLGILMDSNFKASQSIGSQKQQQAMSFQDMIDECKLFYFAGQETTSVLLVWTMILLSKHQDWQTRAREEVLATFGTNQPDLEGLNRLKIVTTILYEVLRLYPPVVTTSRRIYQGDMKLGNIVVPRGAMVSLSIINTHHDPRLWGDDANEFKPDRFSEGIAKATKGNISFFPFGWGPRICIGQNFAIAEAKMAVSIILQRFSFELSPSYTHAPTTVITLQPQHGAHLILHRLPSCSSIHERMYPSLRKMLLMRV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16620.1 vs. NCBI nr
Match: gi|902212070|gb|KNA16862.1| (hypothetical protein SOVF_085350 [Spinacia oleracea]) HSP 1 Score: 941.0 bits (2431), Expect = 9.000e-271 Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 1
BLAST of Spo16620.1 vs. NCBI nr
Match: gi|731365476|ref|XP_010694547.1| (PREDICTED: cytochrome P450 72A15-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 877.9 bits (2267), Expect = 9.300e-252 Identity = 416/513 (81.09%), Postives = 466/513 (90.84%), Query Frame = 1
BLAST of Spo16620.1 vs. NCBI nr
Match: gi|902212069|gb|KNA16861.1| (hypothetical protein SOVF_085340 isoform B [Spinacia oleracea]) HSP 1 Score: 776.9 bits (2005), Expect = 2.200e-221 Identity = 361/514 (70.23%), Postives = 438/514 (85.21%), Query Frame = 1
BLAST of Spo16620.1 vs. NCBI nr
Match: gi|731331577|ref|XP_010676732.1| (PREDICTED: cytochrome P450 CYP72A219-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 741.1 bits (1912), Expect = 1.400e-210 Identity = 348/515 (67.57%), Postives = 426/515 (82.72%), Query Frame = 1
BLAST of Spo16620.1 vs. NCBI nr
Match: gi|731331581|ref|XP_010676734.1| (PREDICTED: cytochrome P450 CYP72A219-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 740.7 bits (1911), Expect = 1.800e-210 Identity = 348/515 (67.57%), Postives = 425/515 (82.52%), Query Frame = 1
BLAST of Spo16620.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDE4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_085350 PE=3 SV=1) HSP 1 Score: 941.0 bits (2431), Expect = 6.200e-271 Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 1
BLAST of Spo16620.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BA81_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g093980 PE=3 SV=1) HSP 1 Score: 877.9 bits (2267), Expect = 6.500e-252 Identity = 416/513 (81.09%), Postives = 466/513 (90.84%), Query Frame = 1
BLAST of Spo16620.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBH7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_085340 PE=3 SV=1) HSP 1 Score: 776.9 bits (2005), Expect = 1.600e-221 Identity = 361/514 (70.23%), Postives = 438/514 (85.21%), Query Frame = 1
BLAST of Spo16620.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQM6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040350 PE=3 SV=1) HSP 1 Score: 686.8 bits (1771), Expect = 2.100e-194 Identity = 327/524 (62.40%), Postives = 417/524 (79.58%), Query Frame = 1
BLAST of Spo16620.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1T0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_123110 PE=3 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 1.500e-187 Identity = 322/515 (62.52%), Postives = 402/515 (78.06%), Query Frame = 1
BLAST of Spo16620.1 vs. ExPASy Swiss-Prot
Match: C7A15_ARATH (Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1) HSP 1 Score: 610.9 bits (1574), Expect = 1.300e-173 Identity = 285/513 (55.56%), Postives = 381/513 (74.27%), Query Frame = 1
BLAST of Spo16620.1 vs. ExPASy Swiss-Prot
Match: C7A29_PANGI (Cytochrome P450 CYP72A219 OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 605.5 bits (1560), Expect = 5.600e-172 Identity = 288/506 (56.92%), Postives = 380/506 (75.10%), Query Frame = 1
BLAST of Spo16620.1 vs. ExPASy Swiss-Prot
Match: C7A14_ARATH (Cytochrome P450 72A14 OS=Arabidopsis thaliana GN=CYP72A14 PE=2 SV=1) HSP 1 Score: 605.1 bits (1559), Expect = 7.300e-172 Identity = 288/513 (56.14%), Postives = 376/513 (73.29%), Query Frame = 1
BLAST of Spo16620.1 vs. ExPASy Swiss-Prot
Match: C7A13_ARATH (Cytochrome P450 72A13 OS=Arabidopsis thaliana GN=CYP72A13 PE=2 SV=1) HSP 1 Score: 592.8 bits (1527), Expect = 3.700e-168 Identity = 281/513 (54.78%), Postives = 375/513 (73.10%), Query Frame = 1
BLAST of Spo16620.1 vs. ExPASy Swiss-Prot
Match: C7A11_ARATH (Cytochrome P450 72A11 OS=Arabidopsis thaliana GN=CYP72A11 PE=2 SV=1) HSP 1 Score: 590.1 bits (1520), Expect = 2.400e-167 Identity = 280/513 (54.58%), Postives = 374/513 (72.90%), Query Frame = 1
BLAST of Spo16620.1 vs. TAIR (Arabidopsis)
Match: AT3G14690.1 (cytochrome P450, family 72, subfamily A, polypeptide 15) HSP 1 Score: 610.9 bits (1574), Expect = 7.500e-175 Identity = 285/513 (55.56%), Postives = 381/513 (74.27%), Query Frame = 1
BLAST of Spo16620.1 vs. TAIR (Arabidopsis)
Match: AT3G14680.1 (cytochrome P450, family 72, subfamily A, polypeptide 14) HSP 1 Score: 605.1 bits (1559), Expect = 4.100e-173 Identity = 288/513 (56.14%), Postives = 376/513 (73.29%), Query Frame = 1
BLAST of Spo16620.1 vs. TAIR (Arabidopsis)
Match: AT3G14660.1 (cytochrome P450, family 72, subfamily A, polypeptide 13) HSP 1 Score: 592.8 bits (1527), Expect = 2.100e-169 Identity = 281/513 (54.78%), Postives = 375/513 (73.10%), Query Frame = 1
BLAST of Spo16620.1 vs. TAIR (Arabidopsis)
Match: AT3G14650.1 (cytochrome P450, family 72, subfamily A, polypeptide 11) HSP 1 Score: 590.1 bits (1520), Expect = 1.400e-168 Identity = 280/513 (54.58%), Postives = 374/513 (72.90%), Query Frame = 1
BLAST of Spo16620.1 vs. TAIR (Arabidopsis)
Match: AT3G14640.1 (cytochrome P450, family 72, subfamily A, polypeptide 10) HSP 1 Score: 589.3 bits (1518), Expect = 2.300e-168 Identity = 284/515 (55.15%), Postives = 370/515 (71.84%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16620.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo16620.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo16620.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo16620.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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