Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ANAAAAAAAAAAAAAAAGGAGGCAAGCCAAACAAGTTTATGGTTAATTGGTTATGCATGTCATAATCCAAGTAAGGAAAGGTAGCGTGAATATGATGAAGCCTCAACTACCCAAACACACTGATCACAAAATGCAACTACCCTTCCTTCCTTACTCCCTCCCTCAAATCTCTCTTCACTTTCTCTCTCTAAACTTCAAACTTCAAACTTCAACAATGGCGGTTTCACTTCCACCATCACACTACTCCCCACTTGAAGAACAGTGGTACAACCCTGATTCAGCACAAACTGAAACCCTAATTCTTCCATTAAAGCATTCTCTCCGACGCTTGAAAACCTTCCTCAGATTCCTGGGTTTCATCCATGATTCCCGTTTTTCACTTTCTCTATCCTCCTTCTCTTTTCTGTTATTCGGCATCGCCGCCCCTTCGCTCATCATCGTCTTCTTCTACTGCGGCTCCGGCTCTGCTTCTGCCTCCGCCTGCCGGAAGTATCACATTAAGGGTTTTGAGCTCGAGACGCTCTTTTTTCAGGCCACCGCCGCCGCAGTATCTCTCCTCTGTTTTTCCTTGAATTTCAGAAAATATGGGCTCAGGGTCTTTCTTTTTGTTGATAATTATCAACAAAATGTTGATCGTTTTCAGTTTGAGTATATCCCCAAAATTGATGTAAGTTTTTTTTAGTAAAGTAAATCCTATTTATTTTAATCTAATGTTGATAGATTTGTTTTTTTGAAGGAGATTTGGTGGCCCTGATCTTACTTGTACTGTTGGACATGGGTATGTGTCCAAGTATTGGACTTGGCTATTTTGTGAGAAATTTCCTTGATTTTGGCCCGAATTAAAGGGTTAAAGTGTTCATATCCATGTTAGATTACTGACATAGGGCCTGAAATGGATTGATTTTGATGAACTTGTGTGCCAAATTTTTAAAATTCTAGCAGCAGGTTAGCGGAATTTGTTTTTTTCTTACCAAAACTTAGTTGGGACTGTAATGGGGATATATTAAGCACTAAATTGCACTTGGCTAATGGGGTACTTTTCCATGGTAATTATTTTGATCTCCAATGATGATCAATATCCTGTCCTAGGTAAGGGGCATCCAATGAAATTTGAGGTGGTTAATATTGCATTGTTACTAATTTGTGTGGTTCTTCAGTTCAGTGATGATTGTGACACTAAAAAACGAGTAACTATAATTATCTCTTGACCTTATATTTGTTATTTGTTACTATTGGAAAGGTAGGTCCGTAGGATCATATAAATAGTAAAACAGACTACTTGGTTAGTTTTGTAGGCGGATTGACATGATCTAATGGAGTACTTGTGTATGTATAATGCTTCTTAGGATCTAGGTGTAAGGATCGGTATATGATTTCCACATTGATCATATTGGGAACTGATGTGTTGCTCAAGTAGTTTAGTGTAATCATAGGCCCTCCAGACCTTCTAGTTAGTCTCCAGGACTTGCTAGTATTTAGGAAATAGGTATTTTAGTTCCAACTTGGTCCTCTGATATCTTAAATACTACCAGTACTGAACTATACGATTTCCAGTCCCTTTTTTTATTTTATTTATTTAACATTCATTCCGCACTTCATTAATTTCTATCCACTAGATCCATTTTGGTGTATCCCTTCTAATTCTTTAATTACTGCATGATAGATGGAAAGGAGTTGAGGTGAACTTTGTCTTTCTAACGCTAGTCTAGCCACTGGATTTAATGAATGTGCTGTAACACAAAGTTATATGCAACATTTTAGTGTTTCTTTAGTAAGTTGAATGTGAAGTTGTAGCGTAAAATGTTCATTCGATGTCGACAGTGATCTAAGAGAAAGTTTTTCCAAACATTTGGTTGATTTACCTACAAAAGTTAATTTGTCCTGAAATGACCTTTATATGGCTTTGCTGGAGTCATTATGAGACACCATTCACGCGAAACTGATTAAATTCTGCTCGTATACTGAGAGATAGATGACTAAGCATAGTATCCCTCCTGTGAATTGATATCAAATGCCGTACTCCATAGTTCCATGATATTGAATCGTGAGAGAAAGTGTCACAATGCAGAGGGAAAATGAATTATAGCAAGAACTTTTTCTGATTGTTTTTCCTTTCTCTTTTGGTCTAACATCAGCAGATTATGTTCAGAGATTTACAAGTTGTTTCTTGAATGCATTATATTTATATTTTCATCACCATGTTACTTCTCAGCTTGTGACTTGCATTGCTAGTGATATTGTGGAATATAAGTTTTGAGCTGTTATCGTTTTTTTTCAGAACTTCTTTCGCTCGTTGGCCGTGTGGGTATTGCCATGCGTTATTTTGAAGACGGCACGGGAGATTGTTAGAGTTATCTATGTCCACAATGATTCACTGGTGCAATCTATGATGGTTGTGTTTGTTTTGCTGGTATCCTGGACTTACACTGCAACGGTCTATCTGACTGGAAGCGCCTTGTTCAGTCTGGTCTGCAATTTACAAGTTATACACTTTGAGAAGTACAAAAATCTTCTGGACAGGAATTTGGATGTATTAGTATATATCGAAGAGCACAGTCGCCTTACATTTAACCTGTCCAAAATAAGTCACAGATTCCGAATTTTTCTTATTTTGGAGTTCTTGATTGTAACTGCTAGTCAAATTGTGACTCTTCTGGAAACGACAGGAAATAACGGGACCATCAATTTCATAAATGCTGCGGATTTTGCAGTAAGTCTCAACTCTATATTTTTCCCTTGAACATATGCTAACCAAGAAACTCCTTGACAGCATCTTTACTACTACTTGAGGCAATTTTTCCGTTTCCTTTTGGTAATTTGTGATGCCACTTTTGACTTGGTAGCTACCTAGTTACTGACTGTTATGTTTGTTGCTAATCCTGCTTTCTCCCAAAGTATGTGCTAATACCATCATTCTGCAAAAGGTGTCTAGAACTTCTGAAGTAGCTGTGTAACAAAGAATGATTGTAGTCACTATATCTAGGGGTTTTAGTCTTAAGACTGATGCAGTACATTTAACCATTAATGCTGGTTGCATCATTCAAATGTCTAACAGTATTTGCAGACTGTGACTTCGGTCAAATTTGTTAGACTTCTGCTTACTTTATGTTATGGCTACTTGGCAGATCTCATCCATTGTTCAGGTGGTTGGAATAATTATTTGTCTGCATGCTGCTGCAAAAATATCTCACAGAGCTCAAAGTCTGGCATCATTTGCCAGTAGATGGCATGCACTACTAACATGTCGCTCAAATGAGACTCTAGGGGCATCTGAAAATGGCGGAAACTTGAATGTTACCGGTTCAGCAGTTGCAGCAATGAACTACCCAGAAAGTGATATGGACTCTGTTGATTATATATTACCACCTATTAATGAAGAAATGAATTCAAATGTGTCTTCGTACCTCAAACGACAAGCATTTGGTGTGTGTTTCTGCTTTCTTGTGCTAACCAATGCTTATGCTGAATTATAATTCATACAGAACCACTGGTTTATCAGTTTTCTTTTTTATGTTTGCAGTCATGTATATGCAGTCGAACCCCGGTGGAGTGACCATTTTCGGATGGACAGTGAATAGGGCATTTATGGATACAATATTCTGTGTTGAACTCACTGTGGTTACCTTTGTTCTTGGCAAGACACTAACATTTACAACAAACAACACTTGA ANAAAAAAAAAAAAAAAGGAGGCAAGCCAAACAAGTTTATGGTTAATTGGTTATGCATGTCATAATCCAAGTAAGGAAAGGTAGCGTGAATATGATGAAGCCTCAACTACCCAAACACACTGATCACAAAATGCAACTACCCTTCCTTCCTTACTCCCTCCCTCAAATCTCTCTTCACTTTCTCTCTCTAAACTTCAAACTTCAAACTTCAACAATGGCGGTTTCACTTCCACCATCACACTACTCCCCACTTGAAGAACAGTGGTACAACCCTGATTCAGCACAAACTGAAACCCTAATTCTTCCATTAAAGCATTCTCTCCGACGCTTGAAAACCTTCCTCAGATTCCTGGGTTTCATCCATGATTCCCGTTTTTCACTTTCTCTATCCTCCTTCTCTTTTCTGTTATTCGGCATCGCCGCCCCTTCGCTCATCATCGTCTTCTTCTACTGCGGCTCCGGCTCTGCTTCTGCCTCCGCCTGCCGGAAGTATCACATTAAGGGTTTTGAGCTCGAGACGCTCTTTTTTCAGGCCACCGCCGCCGCAGTATCTCTCCTCTGTTTTTCCTTGAATTTCAGAAAATATGGGCTCAGGGTCTTTCTTTTTGTTGATAATTATCAACAAAATGTTGATCGTTTTCAGTTTGAGTATATCCCCAAAATTGATAACTTCTTTCGCTCGTTGGCCGTGTGGGTATTGCCATGCGTTATTTTGAAGACGGCACGGGAGATTGTTAGAGTTATCTATGTCCACAATGATTCACTGGTGCAATCTATGATGGTTGTGTTTGTTTTGCTGGTATCCTGGACTTACACTGCAACGGTCTATCTGACTGGAAGCGCCTTGTTCAGTCTGGTCTGCAATTTACAAGTTATACACTTTGAGAAGTACAAAAATCTTCTGGACAGGAATTTGGATGTATTAGTATATATCGAAGAGCACAGTCGCCTTACATTTAACCTGTCCAAAATAAGTCACAGATTCCGAATTTTTCTTATTTTGGAGTTCTTGATTGTAACTGCTAGTCAAATTGTGACTCTTCTGGAAACGACAGGAAATAACGGGACCATCAATTTCATAAATGCTGCGGATTTTGCAATCTCATCCATTGTTCAGGTGGTTGGAATAATTATTTGTCTGCATGCTGCTGCAAAAATATCTCACAGAGCTCAAAGTCTGGCATCATTTGCCAGTAGATGGCATGCACTACTAACATGTCGCTCAAATGAGACTCTAGGGGCATCTGAAAATGGCGGAAACTTGAATGTTACCGGTTCAGCAGTTGCAGCAATGAACTACCCAGAAAGTGATATGGACTCTGTTGATTATATATTACCACCTATTAATGAAGAAATGAATTCAAATGTGTCTTCGTACCTCAAACGACAAGCATTTGTCATGTATATGCAGTCGAACCCCGGTGGAGTGACCATTTTCGGATGGACAGTGAATAGGGCATTTATGGATACAATATTCTGTGTTGAACTCACTGTGGTTACCTTTGTTCTTGGCAAGACACTAACATTTACAACAAACAACACTTGA ATGCATGTCATAATCCAAGTAAGGAAAGGTAGCGTGAATATGATGAAGCCTCAACTACCCAAACACACTGATCACAAAATGCAACTACCCTTCCTTCCTTACTCCCTCCCTCAAATCTCTCTTCACTTTCTCTCTCTAAACTTCAAACTTCAAACTTCAACAATGGCGGTTTCACTTCCACCATCACACTACTCCCCACTTGAAGAACAGTGGTACAACCCTGATTCAGCACAAACTGAAACCCTAATTCTTCCATTAAAGCATTCTCTCCGACGCTTGAAAACCTTCCTCAGATTCCTGGGTTTCATCCATGATTCCCGTTTTTCACTTTCTCTATCCTCCTTCTCTTTTCTGTTATTCGGCATCGCCGCCCCTTCGCTCATCATCGTCTTCTTCTACTGCGGCTCCGGCTCTGCTTCTGCCTCCGCCTGCCGGAAGTATCACATTAAGGGTTTTGAGCTCGAGACGCTCTTTTTTCAGGCCACCGCCGCCGCAGTATCTCTCCTCTGTTTTTCCTTGAATTTCAGAAAATATGGGCTCAGGGTCTTTCTTTTTGTTGATAATTATCAACAAAATGTTGATCGTTTTCAGTTTGAGTATATCCCCAAAATTGATAACTTCTTTCGCTCGTTGGCCGTGTGGGTATTGCCATGCGTTATTTTGAAGACGGCACGGGAGATTGTTAGAGTTATCTATGTCCACAATGATTCACTGGTGCAATCTATGATGGTTGTGTTTGTTTTGCTGGTATCCTGGACTTACACTGCAACGGTCTATCTGACTGGAAGCGCCTTGTTCAGTCTGGTCTGCAATTTACAAGTTATACACTTTGAGAAGTACAAAAATCTTCTGGACAGGAATTTGGATGTATTAGTATATATCGAAGAGCACAGTCGCCTTACATTTAACCTGTCCAAAATAAGTCACAGATTCCGAATTTTTCTTATTTTGGAGTTCTTGATTGTAACTGCTAGTCAAATTGTGACTCTTCTGGAAACGACAGGAAATAACGGGACCATCAATTTCATAAATGCTGCGGATTTTGCAATCTCATCCATTGTTCAGGTGGTTGGAATAATTATTTGTCTGCATGCTGCTGCAAAAATATCTCACAGAGCTCAAAGTCTGGCATCATTTGCCAGTAGATGGCATGCACTACTAACATGTCGCTCAAATGAGACTCTAGGGGCATCTGAAAATGGCGGAAACTTGAATGTTACCGGTTCAGCAGTTGCAGCAATGAACTACCCAGAAAGTGATATGGACTCTGTTGATTATATATTACCACCTATTAATGAAGAAATGAATTCAAATGTGTCTTCGTACCTCAAACGACAAGCATTTGTCATGTATATGCAGTCGAACCCCGGTGGAGTGACCATTTTCGGATGGACAGTGAATAGGGCATTTATGGATACAATATTCTGTGTTGAACTCACTGTGGTTACCTTTGTTCTTGGCAAGACACTAACATTTACAACAAACAACACTTGA MHVIIQVRKGSVNMMKPQLPKHTDHKMQLPFLPYSLPQISLHFLSLNFKLQTSTMAVSLPPSHYSPLEEQWYNPDSAQTETLILPLKHSLRRLKTFLRFLGFIHDSRFSLSLSSFSFLLFGIAAPSLIIVFFYCGSGSASASACRKYHIKGFELETLFFQATAAAVSLLCFSLNFRKYGLRVFLFVDNYQQNVDRFQFEYIPKIDNFFRSLAVWVLPCVILKTAREIVRVIYVHNDSLVQSMMVVFVLLVSWTYTATVYLTGSALFSLVCNLQVIHFEKYKNLLDRNLDVLVYIEEHSRLTFNLSKISHRFRIFLILEFLIVTASQIVTLLETTGNNGTINFINAADFAISSIVQVVGIIICLHAAAKISHRAQSLASFASRWHALLTCRSNETLGASENGGNLNVTGSAVAAMNYPESDMDSVDYILPPINEEMNSNVSSYLKRQAFVMYMQSNPGGVTIFGWTVNRAFMDTIFCVELTVVTFVLGKTLTFTTNNT Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16697.1 vs. NCBI nr
Match: gi|902132265|gb|KNA04308.1| (hypothetical protein SOVF_200840 [Spinacia oleracea]) HSP 1 Score: 847.0 bits (2187), Expect = 1.600e-242 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 1
BLAST of Spo16697.1 vs. NCBI nr
Match: gi|731333804|ref|XP_010677917.1| (PREDICTED: uncharacterized protein LOC104893506 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 677.6 bits (1747), Expect = 1.700e-191 Identity = 358/437 (81.92%), Postives = 388/437 (88.79%), Query Frame = 1
BLAST of Spo16697.1 vs. NCBI nr
Match: gi|590669953|ref|XP_007037920.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 446.0 bits (1146), Expect = 8.300e-122 Identity = 244/414 (58.94%), Postives = 302/414 (72.95%), Query Frame = 1
BLAST of Spo16697.1 vs. NCBI nr
Match: gi|1009130519|ref|XP_015882345.1| (PREDICTED: uncharacterized protein LOC107418182 [Ziziphus jujuba]) HSP 1 Score: 437.6 bits (1124), Expect = 3.000e-119 Identity = 236/414 (57.00%), Postives = 303/414 (73.19%), Query Frame = 1
BLAST of Spo16697.1 vs. NCBI nr
Match: gi|703132607|ref|XP_010105165.1| (hypothetical protein L484_006903 [Morus notabilis]) HSP 1 Score: 436.0 bits (1120), Expect = 8.600e-119 Identity = 249/432 (57.64%), Postives = 304/432 (70.37%), Query Frame = 1
BLAST of Spo16697.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QC96_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_200840 PE=4 SV=1) HSP 1 Score: 847.0 bits (2187), Expect = 1.100e-242 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 1
BLAST of Spo16697.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CGI4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110590 PE=4 SV=1) HSP 1 Score: 677.6 bits (1747), Expect = 1.200e-191 Identity = 358/437 (81.92%), Postives = 388/437 (88.79%), Query Frame = 1
BLAST of Spo16697.1 vs. UniProtKB/TrEMBL
Match: A0A061FYR9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_014593 PE=4 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 5.800e-122 Identity = 244/414 (58.94%), Postives = 302/414 (72.95%), Query Frame = 1
BLAST of Spo16697.1 vs. UniProtKB/TrEMBL
Match: W9RYT9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006903 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 6.000e-119 Identity = 249/432 (57.64%), Postives = 304/432 (70.37%), Query Frame = 1
BLAST of Spo16697.1 vs. UniProtKB/TrEMBL
Match: A5AH03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007922 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 8.100e-116 Identity = 228/416 (54.81%), Postives = 297/416 (71.39%), Query Frame = 1
BLAST of Spo16697.1 vs. TAIR (Arabidopsis)
Match: AT1G67570.1 (Protein of unknown function (DUF3537)) HSP 1 Score: 362.1 bits (928), Expect = 5.600e-100 Identity = 207/416 (49.76%), Postives = 283/416 (68.03%), Query Frame = 1
BLAST of Spo16697.1 vs. TAIR (Arabidopsis)
Match: AT3G20300.1 (Protein of unknown function (DUF3537)) HSP 1 Score: 166.0 bits (419), Expect = 5.900e-41 Identity = 123/420 (29.29%), Postives = 212/420 (50.48%), Query Frame = 1
BLAST of Spo16697.1 vs. TAIR (Arabidopsis)
Match: AT1G50630.1 (Protein of unknown function (DUF3537)) HSP 1 Score: 164.9 bits (416), Expect = 1.300e-40 Identity = 127/429 (29.60%), Postives = 213/429 (49.65%), Query Frame = 1
BLAST of Spo16697.1 vs. TAIR (Arabidopsis)
Match: AT4G22270.1 (Protein of unknown function (DUF3537)) HSP 1 Score: 161.8 bits (408), Expect = 1.100e-39 Identity = 116/409 (28.36%), Postives = 213/409 (52.08%), Query Frame = 1
BLAST of Spo16697.1 vs. TAIR (Arabidopsis)
Match: AT2G21080.1 (unknown protein) HSP 1 Score: 146.0 bits (367), Expect = 6.300e-35 Identity = 118/414 (28.50%), Postives = 198/414 (47.83%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16697.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16697.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16697.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo16697.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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