Spo16805 (gene)

Overview
NameSpo16805
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr6 : 27077357 .. 27078833 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGAATTGGTATGTACGTTCAAGATTTATAAATCATACATTAGCTTTAGAGGGAGAAATATTTTGTACGAAGTAGACCGATCAAATAATAATTTTAGAATATTTGTGCATGTACGAGATATAATATAGTTTCATTTTATAATCAATTATTACCCTAAGTAATTAGAAGGTTTCACGCAAAAAAAAAATGAAATATGTTAATTATTTTATTGTAGAACGCTTGTCAGATTTGTAGCTAGTGTCTTGACAAACGTATAATATATGAGAGTTCAAAATATTATCTTTAACTTTTACCACTTTTTAAAAACAAAACGTAATTATTATAGGTAAGATGTTTAAATTACAGTCCGTATGCACTAAGATTCTATATATATATATTATACTTGTTAAAACTTAATATCTCCGGAAAGTGTGTCAAATATAAGGTTTTAACAATATATCATAATGTTAAATGGTGTGTATAAATATCTCAAATCTATTATTAACTGGTGATGAATCAATTGTATTGGTTAACTGACCATTTATTTATACACTACATATGAAACCTAGAATAACAGGCAAATACCAGTTAACTGTTTAGGCGAAACGTATAAATGGTAAACTTCGGGTTAGTACATAAGCTAAATAGATTATATGATAGTTTTTGTTATAAGTGACTAATTTCTATGTCATATATTGGCTGTTATAAACCGTATAAATTTAAAATATTTAACCTAACATATGCGATGTATGTTTGAATTAGATTATGTGTAGAATTTGATTATGTATACATACATAGGAAATGTTGTATATAAGTTAGTAAAAATATTGATGAATCTTTTAATTATTTATCTATTTTTCCATATTAGTTATTGTTACCTAAAATACAATAAGTTAAATATGACAAAAACAATTATATACCTCGTATTAATTAATTAATATTAAAAGAGAGGCGAATCAATGAGTGACATTTGTCATCACCACATTGATTTCCTCTCTTTTAGTATATTATATAGATAACACATAAGAGTAGTTGTAGCAATAGCAAAATGATTAATGGAGTAATTTACGTGCTAAGCAACAGTTTAGTAAAAATGGATCAATCTATCTCTGTCCTCCTACTACTACGACTACTACTGCCTCTGTCACCACTGTTCCCTTTGTAAATCCCGTCCTACCTCTCTTTCTCTCTCTTCAATTTCGTAGAGAGAGAAGTCAGACATAAAGGGTCACCTCATTTTCAACTTTCAAGCTTTGAATTCTCTAAACCCCATTATCTTCATCAATTCCCTCAACCGTTTTCCACCACCATTATCCTGTTTTCAAAGGTTCAGTTTTTTTTTTTATATATATATATACTTATTATTTTTCCATGGCTTTTGATCTGTGTTTATAGCATAATTCTGGCAGATCTGTATGTAATTTTGCACCAAATTCTAGAATTTTGCTTCAAAATTTTCTCTTAGGCATTTTATCAAGCACTTGGTGTTCATAA

mRNA sequence

ATGATTGAATTGAGAGAGAAGTCAGACATAAAGGGTCACCTCATTTTCAACTTTCAAGCTTTGAATTCTCTAAACCCCATTATCTTCATCAATTCCCTCAACCGTTTTCCACCACCATTATCCTGTTTTCAAAGATCTGTATGTAATTTTGCACCAAATTCTAGAATTTTGCTTCAAAATTTTCTCTTAGGCATTTTATCAAGCACTTGGTGTTCATAA

Coding sequence (CDS)

ATGATTGAATTGAGAGAGAAGTCAGACATAAAGGGTCACCTCATTTTCAACTTTCAAGCTTTGAATTCTCTAAACCCCATTATCTTCATCAATTCCCTCAACCGTTTTCCACCACCATTATCCTGTTTTCAAAGATCTGTATGTAATTTTGCACCAAATTCTAGAATTTTGCTTCAAAATTTTCTCTTAGGCATTTTATCAAGCACTTGGTGTTCATAA

Protein sequence

MIELREKSDIKGHLIFNFQALNSLNPIIFINSLNRFPPPLSCFQRSVCNFAPNSRILLQNFLLGILSSTWCS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16805.1Spo16805.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo16805.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16805.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16805.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16805.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009657 plastid organization
biological_process GO:0010206 photosystem II repair
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009637 response to blue light
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0030091 protein repair
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010218 response to far red light
biological_process GO:0007033 vacuole organization
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0009644 response to high light intensity
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0009658 chloroplast organization
biological_process GO:0010189 vitamin E biosynthetic process
biological_process GO:0016926 protein desumoylation
biological_process GO:0010114 response to red light
biological_process GO:0016310 phosphorylation
biological_process GO:0050665 hydrogen peroxide biosynthetic process
biological_process GO:0016487 farnesol metabolic process
biological_process GO:0048440 carpel development
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0006508 proteolysis
biological_process GO:0050896 response to stimulus
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006591 ornithine metabolic process
biological_process GO:0048481 plant ovule development
biological_process GO:0006560 proline metabolic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006007 glucose catabolic process
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0009723 response to ethylene
biological_process GO:0009750 response to fructose
biological_process GO:0009749 response to glucose
biological_process GO:0009744 response to sucrose
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0007030 Golgi organization
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0044425 membrane part
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009348 ornithine carbamoyltransferase complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0070469 respiratory chain
cellular_component GO:0046862 chromoplast membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
cellular_component GO:0005829 cytosol
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009579 thylakoid
molecular_function GO:0016301 kinase activity
molecular_function GO:0009916 alternative oxidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0052671 geranylgeraniol kinase activity
molecular_function GO:0052670 geraniol kinase activity
molecular_function GO:0052669 CTP:2-trans,-6-trans-farnesol kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0004585 ornithine carbamoyltransferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0016866 intramolecular transferase activity
molecular_function GO:0031072 heat shock protein binding
RNA-Seq Expression