Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTTTTCTCTACTCTCGTTTACAATTTAATCTCGTCTACACCATTAGTCCCGCATTCTGGCCCCTTGGCCGTCGTGGCTCTCTATTACACGCCAAAAACACACAAATAAACTTCCTATTAATGGAGCCCAATCCCATGCCTCCCTTCCTCCCCGTATGACTTCGCCCTCTCACTACCCACTACCCACTACTTCCATATTCTCCTCCTACTCCAAACTCTGTCTCCTCTCTGTCACTGTTTTTCTCTCTCCTCTCATCATCATCATCTGCTTGTCACGTCTTCTGTACTTCTCCTCTTTCCCTTTCTCTCTCTTAAATATATTGTGTCAGAACATGGGATCATGTGTATCATCCTTGCACAAAAATTCTGGGTCGTCTTCAAAAATTGATCAATTTTCTACAGAAAAATCTTCGATGCCACCAACACCCATCAAAGATACTATTAAACCCACTAATGTTGACCCTCCGATTATCTCGTTTAATCACAAGTCTCGGATTTCTCCTTTCAACTCCATTTCCAGTTATCGTAGTTTTGGGGGTATTTTTCTTCATCCTTCCTCAATTCCCTTAATTTTTACTCCGTAATTGATTTTGATCTTCTCTTAATCATACAGTTGATGATGGGTTTTTATTTCATTCTTTTTTAATTTAGTTTGTAGTTGCTGTTAAATTGTTGATGATTTGGGTTTTTATTTAATTTGTTGTTATTAATTTAGTTTGTAGTTTCTGTTGAATTGTTAATGATTTGGGGATGAATCAGTTAATTCGTTTTGATGGTTTGATATGAGGAGGAACTGTTGTTGTATTATTGTCTACTTTTGAATTATTGCTTTCTTTTTGTCTGTTAATGATTTCCTTTTTATCATTAGTGCAATTTAAAAGTTTGAAAAATAATGTAGATATTAATTTGTGCTTTTTGGCTTCTAGTGTTTGGCAGAATAATACAAGTATTTGATTGATCATAATAATAATTGTAATTACTGTACTAAGTGCTACAGTTTGTCATATCAATAATAATCAAATATATTGGATGTTAAAATTACGAGCGTAAAACTCAGATGTTGCAAAGCTTGAAGGGTTTTTATTGGGAGTACTCCGCATTAGATATTGTTAAAACCATAGATAGATGTACGAGAAACTTATGGATTCTGTAATTTAATCTGACCCTACAAAATTCTTAAAGGGGCAAATTAACATAATATCTGTATTTGTTTAGCATTTTTTTGGGGCCATACTTGCCTACTTGGTATCAGGGGAATTATTCAAAGGATTAGTCAATTTATTCTTAAAACAAAGGGTCATGATTCATGAAGGTATGCTTTGAATTATGGGTGAGTAATGAAGAAGGTAATACAAGTTTAAAAAAGATGTTACTCACGAGGGTACTTGTTCAAAGCATACCCTTAATTTGAAAACTTGAGGCGATTATCGTACTTTTTAGTAAAATATACTTCCTCCGTTTTTTAATACTCTGTAGGACTGCAACAAAGGCATATGTTTCAACACAAAAGAAAATGATGTTGTGATAGTTATTTTCTACAGCTGCAACAAATTTATTAACTTGTGGCATTTGTTGCTACTACATTATAGTATTATACTCCGTACAACATAAAGTTTTTGCAAGAATAATGTTATGCATCTAGTTATAGTGTGATGTTTTTTGAAAGAGATCTTAGTACTTCTTTGCTTTATGGCTGGATTTTCCTCTGCACTTGCTGAGAAGTCAGGACTCACATTTTTCATTGCTTCCGGTTGACAGGCAGCAAAGACGAAGCCTTTTTCGACACCCAAGGTTGGCTAGACTCAGATTGTGATGATGATTTTCACAGCGTGAATGGAGGTAAGATATCAGAAGCATGATTTTCAGCAGTTTGACTGTTTAACTCAGTTAATAATCCATACTTTTTTTTGCTATACCTTTCATGATTTTCATGTTTATCTAGAGTTACTCACACTGTCATATGCTTAGCAGTTAGCAGTAGTTTTCTGTTCACTTCCCAGGGGTATGAGTCTTGTGTCTGCTGCATATTTTGTTGATATAGCCATTATATTGGTTGATTCAGCCATTAGCACTGAGCCTTGAAAAATGGAATTCCTATAGAATCCTTGAACCTCCTGAACTAGATTCATCCTTAACAGACCTAAGATGCCTGCTCTATAAGCATCATCTGCCAAAGATCCATCAGTGTTTATTTCAATACTTCGTATATAATAGGTGACATGATTGGATTTGAAACGTGGAGTATATCAGACAGGTTCCATTTGCGAAAAAAGGTGACAGAATTTTGTTTTGGTGTTAGAACATCGGTTGATGGGTACGCAGGAAATTTTGGGCTTGGATTCTTAGAAAACCCAATTAAGTAAATGGTTCTTGAAGTGGTTGTCACTCTTGTCAGTTGTCGTACTTCTATATATTTAGTAGTAGTAACTAAATTCCGTTGTATTGTATGATATTGTGCAGATTTCACTCCTTCTCGTAGCAATACTCCTGTAGCAGGAACTCCTCGACTTAGCAGAGTATTCTCTCCACAAGTTAGTAGAGCTATTTTTGAAGGCAAACCACATATACGCAGTGGTAAGTGTGACTGAACTGGTGATGTATTTCTCATTGTTTGCCTTCTGATGCTGTAATCCTGTTGATTTCGTGTTTACATAATAATATCATCATTTCAATACTCATCATTTCAGTTGTGACATAACACCTTAAAGCTCCGTTTGGTTGGGCCGTGTAAAATGATTTTCATGGAAACCAATTTACAATGGAGAACACAATTTCGAAATTAGTTTTCCGTTGTTTGGTTCCATGTAAGAAAAGTGATGAAACGAAAGGAAAATGAAAGGGAAAGCAAGGAGGAAGTGAGAGGAGTGTACAAGATAGATAAGAAAAAGGAAGGAAAATAGTTTTCCCTCCATTTTGAAGGAAAAATGGTTTTCCATCATTGAGAGAACAATTTTACTCACATGGAAAATGGTTTTACACTCCTTTGCAAACCAAACAATGTAAAATTGAAAATAGAGGAAAACAGTTTTCCAAGAAAATATTTTACGCCCTATCAAACGGAGCCTAATTAAGTGACTGTATCATTTCCTCTTATGATTTTCTGTATGTGAGTATTCTTAAGATTAGATTTGGATGACAATGATGTTGTTAAGGGTTCTTTCTCTTAATGCAGCATCAAACCAATCAAGAGGAAGTCCTTCAGTTCGCCGGAGCTTTTCATCTATCCCTCAAGCAACTGAATCCTTTTCTGAAGACTTGGATGGTCTTAATTCAGCTTCATCCTCGACAACCACCTCAACAAGTACCTCAACAACAAAGAGCAAGAAACTCCTTGATCTTTTCAAAGAAAGCATGAGAGAGCGCGGTGATGTAGGACTAACTTCTCCATTTTCAGATTTGCCACGAACTTCAACAAGTAGAGCCCCATCTGGGTTACGCTATGTTTCTAGCAGTGATAACGCGATTCCTGCTGATGAACGTGTGCCTGTAAAAGAGAAGTCTGGAAAATTTTCACATCACTGCTTTCCAAGAATGGCTTATGTTCGTAGCTTTAGCACAAGTAAGAAGAGATCTAATAATCCTCCTATGTCTACAGATGATTTAAAAGCGTAAAAGAGCTAGCATGCGTTTTCGGATCGAGCTGTAATACTCATTTTGCCAAGTGATGGAAGATTTACATTACTTGTGCAATCTCCAAAGATCAATTTTAATTAGTACAATGTACATATAAGGGTCATATTCAATAATGAAGGTACTAAGTTGATCACTTCAGGCTATGTATACTTCTATTTTCTTATATACTCCATATATAATTAATACCATGTAAAAAGTGAGGGTGTATCAGAACATGTTCCCTAAGATATGTTGGACTACCAAGGATTTTGTAGTAAATTTGTCTCAAAGTAGTGACCAAATTCCTTCCTATCAATCCCC GATTTTTCTCTACTCTCGTTTACAATTTAATCTCGTCTACACCATTAGTCCCGCATTCTGGCCCCTTGGCCGTCGTGGCTCTCTATTACACGCCAAAAACACACAAATAAACTTCCTATTAATGGAGCCCAATCCCATGCCTCCCTTCCTCCCCGTATGACTTCGCCCTCTCACTACCCACTACCCACTACTTCCATATTCTCCTCCTACTCCAAACTCTGTCTCCTCTCTGTCACTGTTTTTCTCTCTCCTCTCATCATCATCATCTGCTTGTCACGTCTTCTGTACTTCTCCTCTTTCCCTTTCTCTCTCTTAAATATATTGTGTCAGAACATGGGATCATGTGTATCATCCTTGCACAAAAATTCTGGGTCGTCTTCAAAAATTGATCAATTTTCTACAGAAAAATCTTCGATGCCACCAACACCCATCAAAGATACTATTAAACCCACTAATGTTGACCCTCCGATTATCTCGTTTAATCACAAGTCTCGGATTTCTCCTTTCAACTCCATTTCCAGTTATCGTAGTTTTGGGGGCAGCAAAGACGAAGCCTTTTTCGACACCCAAGGTTGGCTAGACTCAGATTGTGATGATGATTTTCACAGCGTGAATGGAGATTTCACTCCTTCTCGTAGCAATACTCCTGTAGCAGGAACTCCTCGACTTAGCAGAGTATTCTCTCCACAAGTTAGTAGAGCTATTTTTGAAGGCAAACCACATATACGCAGTGCATCAAACCAATCAAGAGGAAGTCCTTCAGTTCGCCGGAGCTTTTCATCTATCCCTCAAGCAACTGAATCCTTTTCTGAAGACTTGGATGGTCTTAATTCAGCTTCATCCTCGACAACCACCTCAACAAGTACCTCAACAACAAAGAGCAAGAAACTCCTTGATCTTTTCAAAGAAAGCATGAGAGAGCGCGGTGATGTAGGACTAACTTCTCCATTTTCAGATTTGCCACGAACTTCAACAAGTAGAGCCCCATCTGGGTTACGCTATGTTTCTAGCAGTGATAACGCGATTCCTGCTGATGAACGTGTGCCTGTAAAAGAGAAGTCTGGAAAATTTTCACATCACTGCTTTCCAAGAATGGCTTATGTTCGTAGCTTTAGCACAAGTAAGAAGAGATCTAATAATCCTCCTATGTCTACAGATGATTTAAAAGCGTAAAAGAGCTAGCATGCGTTTTCGGATCGAGCTGTAATACTCATTTTGCCAAGTGATGGAAGATTTACATTACTTGTGCAATCTCCAAAGATCAATTTTAATTAGTACAATGTACATATAAGGGTCATATTCAATAATGAAGGTACTAAGTTGATCACTTCAGGCTATGTATACTTCTATTTTCTTATATACTCCATATATAATTAATACCATGTAAAAAGTGAGGGTGTATCAGAACATGTTCCCTAAGATATGTTGGACTACCAAGGATTTTGTAGTAAATTTGTCTCAAAGTAGTGACCAAATTCCTTCCTATCAATCCCC ATGACTTCGCCCTCTCACTACCCACTACCCACTACTTCCATATTCTCCTCCTACTCCAAACTCTGTCTCCTCTCTGTCACTGTTTTTCTCTCTCCTCTCATCATCATCATCTGCTTGTCACGTCTTCTGTACTTCTCCTCTTTCCCTTTCTCTCTCTTAAATATATTGTGTCAGAACATGGGATCATGTGTATCATCCTTGCACAAAAATTCTGGGTCGTCTTCAAAAATTGATCAATTTTCTACAGAAAAATCTTCGATGCCACCAACACCCATCAAAGATACTATTAAACCCACTAATGTTGACCCTCCGATTATCTCGTTTAATCACAAGTCTCGGATTTCTCCTTTCAACTCCATTTCCAGTTATCGTAGTTTTGGGGGCAGCAAAGACGAAGCCTTTTTCGACACCCAAGGTTGGCTAGACTCAGATTGTGATGATGATTTTCACAGCGTGAATGGAGATTTCACTCCTTCTCGTAGCAATACTCCTGTAGCAGGAACTCCTCGACTTAGCAGAGTATTCTCTCCACAAGTTAGTAGAGCTATTTTTGAAGGCAAACCACATATACGCAGTGCATCAAACCAATCAAGAGGAAGTCCTTCAGTTCGCCGGAGCTTTTCATCTATCCCTCAAGCAACTGAATCCTTTTCTGAAGACTTGGATGGTCTTAATTCAGCTTCATCCTCGACAACCACCTCAACAAGTACCTCAACAACAAAGAGCAAGAAACTCCTTGATCTTTTCAAAGAAAGCATGAGAGAGCGCGGTGATGTAGGACTAACTTCTCCATTTTCAGATTTGCCACGAACTTCAACAAGTAGAGCCCCATCTGGGTTACGCTATGTTTCTAGCAGTGATAACGCGATTCCTGCTGATGAACGTGTGCCTGTAAAAGAGAAGTCTGGAAAATTTTCACATCACTGCTTTCCAAGAATGGCTTATGTTCGTAGCTTTAGCACAAGTAAGAAGAGATCTAATAATCCTCCTATGTCTACAGATGATTTAAAAGCGTAA MTSPSHYPLPTTSIFSSYSKLCLLSVTVFLSPLIIIICLSRLLYFSSFPFSLLNILCQNMGSCVSSLHKNSGSSSKIDQFSTEKSSMPPTPIKDTIKPTNVDPPIISFNHKSRISPFNSISSYRSFGGSKDEAFFDTQGWLDSDCDDDFHSVNGDFTPSRSNTPVAGTPRLSRVFSPQVSRAIFEGKPHIRSASNQSRGSPSVRRSFSSIPQATESFSEDLDGLNSASSSTTTSTSTSTTKSKKLLDLFKESMRERGDVGLTSPFSDLPRTSTSRAPSGLRYVSSSDNAIPADERVPVKEKSGKFSHHCFPRMAYVRSFSTSKKRSNNPPMSTDDLKA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16830.1 vs. NCBI nr
Match: gi|902224660|gb|KNA19847.1| (hypothetical protein SOVF_057680 [Spinacia oleracea]) HSP 1 Score: 486.9 bits (1252), Expect = 2.900e-134 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo16830.1 vs. NCBI nr
Match: gi|731318863|ref|XP_010669951.1| (PREDICTED: uncharacterized protein At3g27210-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 344.0 bits (881), Expect = 3.000e-91 Identity = 195/284 (68.66%), Postives = 222/284 (78.17%), Query Frame = 1
BLAST of Spo16830.1 vs. NCBI nr
Match: gi|659098331|ref|XP_008450086.1| (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo]) HSP 1 Score: 97.4 bits (241), Expect = 4.900e-17 Identity = 61/123 (49.59%), Postives = 79/123 (64.23%), Query Frame = 1
BLAST of Spo16830.1 vs. NCBI nr
Match: gi|225452132|ref|XP_002262897.1| (PREDICTED: uncharacterized protein At3g27210 [Vitis vinifera]) HSP 1 Score: 97.1 bits (240), Expect = 6.500e-17 Identity = 93/284 (32.75%), Postives = 141/284 (49.65%), Query Frame = 1
BLAST of Spo16830.1 vs. NCBI nr
Match: gi|922342248|ref|XP_013448049.1| (hypothetical protein MTR_7g029620 [Medicago truncatula]) HSP 1 Score: 93.2 bits (230), Expect = 9.300e-16 Identity = 63/127 (49.61%), Postives = 83/127 (65.35%), Query Frame = 1
BLAST of Spo16830.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLY6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_057680 PE=4 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 2.000e-134 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo16830.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZY7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g037960 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 2.100e-91 Identity = 195/284 (68.66%), Postives = 222/284 (78.17%), Query Frame = 1
BLAST of Spo16830.1 vs. UniProtKB/TrEMBL
Match: F6I5J9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0171g00120 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.500e-17 Identity = 93/284 (32.75%), Postives = 141/284 (49.65%), Query Frame = 1
BLAST of Spo16830.1 vs. UniProtKB/TrEMBL
Match: A0A072TY02_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_7g029620 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.500e-16 Identity = 63/127 (49.61%), Postives = 83/127 (65.35%), Query Frame = 1
BLAST of Spo16830.1 vs. UniProtKB/TrEMBL
Match: M5XDF1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010921mg PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.500e-16 Identity = 75/200 (37.50%), Postives = 113/200 (56.50%), Query Frame = 1
BLAST of Spo16830.1 vs. ExPASy Swiss-Prot
Match: Y3721_ARATH (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.600e-7 Identity = 69/209 (33.01%), Postives = 93/209 (44.50%), Query Frame = 1
BLAST of Spo16830.1 vs. TAIR (Arabidopsis)
Match: AT3G01860.1 (unknown protein) HSP 1 Score: 74.7 bits (182), Expect = 1.200e-13 Identity = 50/112 (44.64%), Postives = 60/112 (53.57%), Query Frame = 1
BLAST of Spo16830.1 vs. TAIR (Arabidopsis)
Match: AT5G40860.1 (unknown protein) HSP 1 Score: 64.7 bits (156), Expect = 1.300e-10 Identity = 63/214 (29.44%), Postives = 97/214 (45.33%), Query Frame = 1
BLAST of Spo16830.1 vs. TAIR (Arabidopsis)
Match: AT3G27210.1 (unknown protein) HSP 1 Score: 57.4 bits (137), Expect = 2.000e-8 Identity = 69/209 (33.01%), Postives = 93/209 (44.50%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16830.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16830.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16830.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo16830.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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