Spo16837 (gene) | SpinachBase

Overview


Name	Spo16837
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Lysosomal cystine transporter family protein
Location	chr1 : 6307867 .. 6315491 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCGCGTGTGTTAACCCGCGAAAATTTGAAACCCAATTCAATAATAAGGTGGTCTTTCCTGTAAGACCGTCTTTTATAAAAGTTTGTAAAAAATAAATCACCCCCAAAATCGATTTCATGTTTTCAACAATCTTATCCTAAAAAAACAAAAAAAAATCATAAAATAAGAAATTCAATGGAATGAACAAAACCCAGATACCCGTCCTTGTTCGATCTGCAAACGTATGCATTACTTTAAGTTGTGACCCATACTTGGCCTGCAGCATCCCCCTTTTTTTTCCCATTAAATTCCAACAAAGATTAGATTCTGTAAGACCAAACCAAAATCGCAACCAAGATTCTGAAAAATACCCAATAAATTTCCACCTTCATCAAAATTTCCATTTCTGCGTTTCTGAAGGAAAAGGGTAAATTTTATAGTTATGGGGTCACATTGGAATTCATTTCCGTTGGAGATCATATACCAGATTTTTGGTTGGATTGCTTTCTTCTCTTGGTCTATTAGCTTTTACCCGCAAATTATCCTCAATTTCCGCCGTAAAAGGTTTGTGATTTTACAGTATCCTTTGTTCTTGAGTTGTATGCTATGATGTAGACGGGATTCGATGATGCTTTATCCACCATTTTTGGGTTAATTGTTGTTTTAATTCATGGTACAGTGTGGTGGGGTTGAATTTTGATTTCGTGGTGCTGAATTTGACAAAGCATAGTACGTATCTTATATACAACGCTACCCTTTACTTCAGCTCTGTTGTTCAGAAGCAATACCGCGACAAGTATGGCCTTGATGAGGTGATCCCTTTTTCTCTCTTACTCTTTTTTTCTTTACTGGTAGAGTTCATTGAGTTCATCAATCATCTTATGTGTATCGTTTGCTTTTTGTCTAAACAATATGATTATGTTTTCATGGTACAAATTAGCATTTTTGGCTAATGGATTTTGTACACCAATTTATATGGTTGACTTGTACTCCTCTAACCCGTTACTTTGACTCTTAATATCTCAAATCCTGTGTAAGTAAAAATTATACAAAATTGATATGTAGAAAATATATATCGATATGAATCTAACCTGAACCTATATGACTGCAATTTTCTTACATATGAATTACAAAAAGTAGCTAAAGTCGTGATGTGAATAGTGTAAAAAATCAACAAAAGGTCTTGCGCGCACAAGGTGTACAATAAATTTATTGTACACCAAAATAACTTTAACCTATTTTTTTGTAATTTTAACCTAGCTTTGATTAACTTTTATATTAGTAAAAAAAAGTTGATAGATAAACATTTTAAAGGATTAAATAATTAATTTTATACATTATTAGTGATTTTGAAGAAATAAGTTTTATTAAAATGAAAACATTTATCACAAAAATTTATATAACTTTTACATATATAAGCATAACTTTTAAGCATTTTGAGTTAACTTTTACTCGGGTGTACAATAATTATTGTACAACCATTGTAAATAAGAATTTGTGAAAAATCAAATGGTGCGATATTTACGGAATGGAGGAAGTATATATTCTTTTTGTTGCAAATGAGTCACAAGGGCTATATGGCTGAGAATCGAATCTGAAACCTATCATAAACAGACCATTAGTGTTAACCAATTTATAGTTGACTAGGCTAGAAGTGTCATAGACGGGAGTAAGGTAATAACAGGACACTTCGCGAGTAAGGGAGTAACAGGACATTCCGGCCCTAGGCCCTAGACCGCTGCACCTCTCGCCTAGGCTCAGGGTTGGGCCGGAACGTGTCCAAGTGTTTGGGACGACCATTTTACAAAGAAAAGAATTTGCATGAATTTGGGGCAAAATGAAGTGTGTCATATCAATATTGAGTATCAGACATGTTCTTGAGGTGATAATGTGATATGAAGACTGAGAGTAGCATATAGGAATAGAATTAAGGATGTGTATTGGTAACTGTCTTTTATTTCCAGCTGAAGTGGAGGAAGTTCGATTCTCATGGACAATGCCAGGGATGGGTCTTGGTAGGCAGCTTGCTAACTTGAGAAAAGTCAATAGCTCAAGCTTGCCATGATATACCTTTCTAAAATTAGGGGAATGAGCCTTGGTGGGCAGTCTTGAGATAGGTCGATAGCTTATTAAATCATGCTCGGCGTATGATATACTTTACTAAAAATTCAAATATCCTATTAGGGAATGAGACTACTAGATTAGGAACGCGATCCTCTCTGTGGATCATTTCTTCAATGAACGGTTGAGGCTTAGCTGTAAAGAAAGGGAAACAAAGGTTTTGGGATTTATATTCGTTTGCTTAGATGTCATAATTTGAAGATAAGAAATAGAGGGAAAGATAATAAGGAGGATCCTAAGTTACTAATACGTTTCAATCAGGTCCAATAAGTTTACTCTCTAATGTTTACTCTCTTGCATTCATGTCTAATTAGGTCCAATAAGTTTCAATCAGGTCCAACAAGTTTCAATCGGGTCAATCATGCTTAATCATGTCCAATAAGTTCCAAGAATATCACATAAGTTCAGGTCTCATCCGGTTAACACAAACCATCCTATTTAAGTACTTTCGAAAATTAGACATGATCATTTTTTTAGCTAATAATGTTAAAACTTGAACTTCTCACGATCCTCGTTCTTTAGTATTGGTTACACACTTACACTTACTATAGGCATGAAAGACCAAGGTTAACAAATTTAATATGTGCAATGGAACTCAAATATGTATGTGATCACCCCAATTGTAGTTTTAGTCTGATGCTTAATTAACCCACAATTTCTTTTCAGTGTCCAAATACTTGTTTTGGAGCTGAATTATTATTGTCTTTTGTGCTTCAAAACCTGGTTCTTGATCGAATTTATTTCTTGATGAACTTAATCTCCTCTAGCTTGTTTCTTCATCATCATTCGATCCTTAGTGCAAAAAATGTACTTGCCAGTTCTCATTGGCTGAAAATTTGCTAGAACTTGTGGCTTATCACATTTGTTGATTTTGGAGGTAGGTCCTGCGCAGGACGATAGTGAAATGCTTCATCCTATTTTGTACGGAAAACACTCAAATTGAAAATGAGGGTCATAGGCATTGTACTTTTACTAGAAAAAACCATTTGTTGAACTTGAACTTATTTGAACATTCTGAACTTATTATTACTCTTGTAAAAGAATATTGGCCCTTAACTTATTTAAGTTGTAAAATACTGAAATGAACTTGGGTAGCTCTTATCTGAACTTATAGGCCTTTATGTTATTTGAAATTATTGGCCTTTAAGTTAATTGAACTTTTTGGCCTTTACCTGAACTTATTGGTCCGTTTTTGAATTTGTTGACCTTTAATGTAAAGAGGAAGAACAACTATTGAAGTACTTATAAAGTTATCCAACTAGTTCTTCATGTGACACCTTGTACACGAAATTATCGTTTTAGGCTGTTCCACATGTCATATATAATGTCTTGTTTGACTGGTGTGTATGTTGCAGATGATTCCCGTGGCTGCGAACGATGTTGCGTTTTCTATACATGCCGTTTTATTGACAGCATTTACGTTGTTCCAGATCTTTATCTATGAAGTAAGTAGCACCTTATGCAAGTTTAGATTTTCGTGGTAGATTTTTGTCATGACTTAATGCGAGATTTCCTTTATTTTGTTACAAATCTAATACTTGTGTATATTTTCTCTGAAGGGTGGAAACCAGAAAGTGTCGAAGATTTCCCTCACACTTGTTACTGTTGCATGGTGTGCTGCTGCGGTTTGTGTATTTGTTGCTTTGCCAAGCCATTCGTGGCTTTGGCTGATCACTGTCTTCAAGTAAGAATTTTTTTCCCCTGCTAATATGTCCTGCTGTATATGTTAGCTTTTATCTATGTGAAGTTATGAACTAAAAAAAGGGTGATGTTAGATTAGCTTGCAATGTTGAGCCAACGATACGTTAGACAAGAAATTGGAAGAAAACAAGCAAAACAGATCCATCTTCCTTGAGATTACAAGAAAGCATGCAAATCAATCTGGGCCATTTAGTAAAATTTAAAACGGAATCTACTTTGGTCGTCTCTGGGCATTCACAGTATATAAGTTTTAGCATTTAACAAAAGTCCTTAATTAATTGAACTGTACGTCATGTACTTTGTTGGAGGGATTTAATTGTTACTAATGTAGAATCAGATAGCAATTTCCATGAGATTCTTGGAAAAGACTATTTGCAAGAAAATTTGTTTTATGAGAAAAAATGGGATTTCACATTTGTGCCTTAAGAATTAACTGAGATGTAGGAGCTAGGTGGGATAAGGCAACGATTGATGTGGAGAAGCACTCGATTCTGAGTTGATATTTATTGATTATAACTACTGGAGCATAATGGACCATGTATTTTGAAGAATAGAGGCAAGACAGAATGCTAAATCAATCTATATAAATGAGACTTAAGTGCTGTATTTCTGGTTCTTGGATTTGTATCAAATTAAGGGGATATATGAGCTTGACTACAGTATGTTGAGATTTAGGCACCAATCTTTGATCAACTATGGTTGATGGTGGAACAACTCCTTATGAGCTTATTTATGTGGCGCAAGGAACTTGTCACAGACTCGGGTGCAGGTGGCTACTCATCAAAAAGCTAATTTTGGCCCTTAAGGCCTAGCTTCCTACTCATTTTAGGTCTGTCGCAAGTCACAATCTGATCCTGTTTTTGGTGTAAGTTTACTATTAGGAACTCCTCATTTTCAACCATAAAGCTTTAGTGCTCTAAGTTCCCGTAAAATTGGTGCTCTACTCTCCACTTTGCTGGGCATCTAATTGCGGTGCAATCACTGACGATTAAAGCATAACGTGTTAGCTTTCACTCAAGATGATATCATTCAATTAGAAGCTAAATTGAGGGAGCTAGGTGCACTCTTTGTCAAACATGCAATTTACAGCTTCTCTGGTTTTGGCCAGTGTCTCCCACATCCTTTGAGGTCTGTAACCCATTTTCCTATGGTAGATTCTTCAATCTAGATACTGTTCAATTCTTTAATTTCTAGTGGCAAGGTTATGACTGTAGTTCCTTGTTGCCCCTTTCTTCCCAAAATAACTCCTCGTTACTATTTGGGGTGTTCCAAAAGAAACTTCTTTTATCTTTTTAAGGTCATAAGCTCACTTGTTTCCTCCTTATCAGTGATTGGTTGTTTGGAACAGACCAGTGGTTGTCTGGTAGAAACTGTTTAGTAGGGTAAAATGTGTGAACTACAATTAGGGACTTGTATTTTGAACAACTAAATGATAGACCGAACCCAATTTAAGTCCAGGTCATGTTATTTATATGACCAGGGACAAAAAACTTTCATGTTACATTAGGATTTGAGTTTTATATTGTGTTTTGATGGTTGTGCAGATATGCAACTAAATAAATCTGCATTTAGAGATATGCAAGTGGCCCATGTTGGATTTAGTGCTTCAAATTAGTGGATTAATTTAAGGGATATGATCAATGTGTTAAGTAAGTGTGTAGTAGGAATTTTGTAAGGGGGACACCAAGTCCTCAAGAGTTAGCTTATATAATAGAGATTCAGCTCGTCTTTGGCAGCTAGCCATAGCGAGCAACGGTGTGTTTATGCACACATTTTTCCATACCACTAATGAAATTTGAAGGATTTCATTATGACGTTGAACGCTCAATATCTTATGAAGGCCAGTGGATAATATGATTTTCCTAAAAAGATACATGTATGCCATGTCATACTTCTTCCTGGTGTGGACGTAATACCAGAAGCATTTGTTGAATGATAACTTTATACACATTGTCTTTGATTTCTTCATAACATGAGAACTTTTTTGTTTTAATGTTGCAGCACTATTCAAGTCAGCATGACTGTCATTAAATATATTCCCCAGGTTGGTGTTTGCTTCTTTAAAACTCTCTTCATGCATTTCCATTTATGACTAAATGCTATTCGTCTGGAAGAATAATTGTTATTGCCTTCTGTCTGAACTGTGAAGTCGTAAGTCAGAGAATTATCTCGTTGTCCAGACATAGATTGCCTAAACAAAGCCTCTGCACTTGGAAGGAATTATAGGTATTAATGCATGTATGGGTAGTGGAAGCCGGAAGGGGGTAGGTGTGTTTAACCTATTCATATTGGAACTTTTGCTACAGTAAGATGCATATAATGTATCCTGGTTAAATCTTGTTTGCGAACCTGATTTCATACGTATGCTATGTTGCATCAAAACTTAGCTTTGACTTGCTCGCTTTTCTACCATAGTGAACCACCCTGACAATATTAACCTCCCTCTTGTATTGCTGTTACTGCTGTAATTGAATGGGATGGCCACTTGATTGTTGTTCATTACTACACTTTATTTTAAAGGCCTTCTGGACTGCTGGTGGCAGTGGCGGATGTTCTATATGGCTCGGGTGGGCCCGGTCCCCAGGCGGAAAATTTTGTAGTATATTTTTAGTTACGAGTTACGACCCTTTTAAAATTTGTGTATAATTGTATAAATGTCATACTAAATTGCTTAATTCTTCTACTGCCCCCTTCATATAAAAAGTGTCCTAGATTCGCCACTGGCTGGTGGTTCTGTTTTCAAATTGTCATTGAGTGGAGGCGAGTGGAGTATAATGTTTTAAGACTTTCAACTCTCTGGAAGATGGCACTTGTAGTTTATAAATTTGCGTTGTGAAAAATCTCTGTATAATATTTTATTTTTTTATTCCAGTTTCTTTGGTTTATTAAGATCTAAAAAGGGTATTAAGCATATTTTTTTTGGATGCAGGCATTTATGAACTTCTACCGGAAAAGCACAGAAGGATTTAGCATAGGAAACATTTTACTTGATTTTCTTGGAGGAGTGACCAACTATGGACAAATGGCTACACAGTCTATCGATCAAGGTGCGTTGCTTTCCTATAGCAGTAACGTAAATCTAATTTTATTTCCTTAAAAAGTTGCTAACACATATTTAAATCTCTATTTGTGTCCATATACAGGTTCTTGGGTAAATTTCTATGGAAATATAGGGAAGACATTGCTGTCTCTGGTATGCATGCCCATTTACTTACCTCTCTAACTTTCAAACCAACTTTTTTTTTAAATGTTGAATCGCCGTGCAGGTGTCTATCTTCTTTGATCTCCTGTTTATGGTGCAACACTACGTGCTATATCGCAGTAAGCCAATCCATCATCCTTCTAAGGTTGAAGACGAGGCAAACAAGGAAGCACTCTTGAAAAGCTCTGATCTACCAACATCAGACCTTCCCTAAATCACGAACATGTTGGACGAAGGGGCCCATATAATCGATGTAGAGAACTCGTGAGTCGTGACCATTCTTTGGGAGAGACTCTTCTTCATTATTCACAATATACCCCCATATTAGTCGAGGAACTGCGCACGTACTCGGTACTCCACACTGACTAATTATTGAAATTTGTAGAAGAAATTAAAGAGAATTTGTACATATTGTAGTTAGGTTTTCATTTTGGCAGTGTAAAATGGTGGATTTATCCTTGTTTTGATGCATTATACATGTATGGAATAAACCATAGTTAAGGGTTTTTGAATTCAATTGTGAGAAACAGTCTATATAGCTTTATTGAATGTTACACTTTCCACTTTTTTAAATAATGAGTGTATCCCAAATTGTGATGCATCTGGAGTTGACCTTGCT

mRNA sequence

TACCCGCGTGTGTTAACCCGCGAAAATTTGAAACCCAATTCAATAATAAGGTGGTCTTTCCTGTAAGACCGTCTTTTATAAAAGTTTGTAAAAAATAAATCACCCCCAAAATCGATTTCATGTTTTCAACAATCTTATCCTAAAAAAACAAAAAAAAATCATAAAATAAGAAATTCAATGGAATGAACAAAACCCAGATACCCGTCCTTGTTCGATCTGCAAACGTATGCATTACTTTAAGTTGTGACCCATACTTGGCCTGCAGCATCCCCCTTTTTTTTCCCATTAAATTCCAACAAAGATTAGATTCTGTAAGACCAAACCAAAATCGCAACCAAGATTCTGAAAAATACCCAATAAATTTCCACCTTCATCAAAATTTCCATTTCTGCGTTTCTGAAGGAAAAGGGTAAATTTTATAGTTATGGGGTCACATTGGAATTCATTTCCGTTGGAGATCATATACCAGATTTTTGGTTGGATTGCTTTCTTCTCTTGGTCTATTAGCTTTTACCCGCAAATTATCCTCAATTTCCGCCGTAAAAGTGTGGTGGGGTTGAATTTTGATTTCGTGGTGCTGAATTTGACAAAGCATAGTACGTATCTTATATACAACGCTACCCTTTACTTCAGCTCTGTTGTTCAGAAGCAATACCGCGACAAGTATGGCCTTGATGAGATGATTCCCGTGGCTGCGAACGATGTTGCGTTTTCTATACATGCCGTTTTATTGACAGCATTTACGTTGTTCCAGATCTTTATCTATGAAGGTGGAAACCAGAAAGTGTCGAAGATTTCCCTCACACTTGTTACTGTTGCATGGTGTGCTGCTGCGGTTTGTGTATTTGTTGCTTTGCCAAGCCATTCGTGGCTTTGGCTGATCACTGTCTTCAACACTATTCAAGTCAGCATGACTGTCATTAAATATATTCCCCAGGCATTTATGAACTTCTACCGGAAAAGCACAGAAGGATTTAGCATAGGAAACATTTTACTTGATTTTCTTGGAGGAGTGACCAACTATGGACAAATGGCTACACAGTCTATCGATCAAGGTGCGTTGCTTTCCTATAGCAGTAACGTGTCTATCTTCTTTGATCTCCTGTTTATGGTGCAACACTACGTGCTATATCGCAGTAAGCCAATCCATCATCCTTCTAAGGTTGAAGACGAGGCAAACAAGGAAGCACTCTTGAAAAGCTCTGATCTACCAACATCAGACCTTCCCTAAATCACGAACATGTTGGACGAAGGGGCCCATATAATCGATGTAGAGAACTCGTGAGTCGTGACCATTCTTTGGGAGAGACTCTTCTTCATTATTCACAATATACCCCCATATTAGTCGAGGAACTGCGCACGTACTCGGTACTCCACACTGACTAATTATTGAAATTTGTAGAAGAAATTAAAGAGAATTTGTACATATTGTAGTTAGGTTTTCATTTTGGCAGTGTAAAATGGTGGATTTATCCTTGTTTTGATGCATTATACATGTATGGAATAAACCATAGTTAAGGGTTTTTGAATTCAATTGTGAGAAACAGTCTATATAGCTTTATTGAATGTTACACTTTCCACTTTTTTAAATAATGAGTGTATCCCAAATTGTGATGCATCTGGAGTTGACCTTGCT

Coding sequence (CDS)

ATGGGGTCACATTGGAATTCATTTCCGTTGGAGATCATATACCAGATTTTTGGTTGGATTGCTTTCTTCTCTTGGTCTATTAGCTTTTACCCGCAAATTATCCTCAATTTCCGCCGTAAAAGTGTGGTGGGGTTGAATTTTGATTTCGTGGTGCTGAATTTGACAAAGCATAGTACGTATCTTATATACAACGCTACCCTTTACTTCAGCTCTGTTGTTCAGAAGCAATACCGCGACAAGTATGGCCTTGATGAGATGATTCCCGTGGCTGCGAACGATGTTGCGTTTTCTATACATGCCGTTTTATTGACAGCATTTACGTTGTTCCAGATCTTTATCTATGAAGGTGGAAACCAGAAAGTGTCGAAGATTTCCCTCACACTTGTTACTGTTGCATGGTGTGCTGCTGCGGTTTGTGTATTTGTTGCTTTGCCAAGCCATTCGTGGCTTTGGCTGATCACTGTCTTCAACACTATTCAAGTCAGCATGACTGTCATTAAATATATTCCCCAGGCATTTATGAACTTCTACCGGAAAAGCACAGAAGGATTTAGCATAGGAAACATTTTACTTGATTTTCTTGGAGGAGTGACCAACTATGGACAAATGGCTACACAGTCTATCGATCAAGGTGCGTTGCTTTCCTATAGCAGTAACGTGTCTATCTTCTTTGATCTCCTGTTTATGGTGCAACACTACGTGCTATATCGCAGTAAGCCAATCCATCATCCTTCTAAGGTTGAAGACGAGGCAAACAAGGAAGCACTCTTGAAAAGCTCTGATCTACCAACATCAGACCTTCCCTAA

Protein sequence

MGSHWNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYNATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKISLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGFSIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSNVSIFFDLLFMVQHYVLYRSKPIHHPSKVEDEANKEALLKSSDLPTSDLP

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16837.1	Spo16837.1	mRNA

Homology

[Close]

BLAST of Spo16837.1 vs. NCBI nr
Match: gi|902226659|gb|KNA20439.1| (hypothetical protein SOVF_052430 [Spinacia oleracea])

HSP 1 Score: 512.3 bits (1318), Expect = 5.100e-142
Identity = 261/276 (94.57%), Postives = 265/276 (96.01%), Query Frame = 1


		  
Query: 1   MGSHWNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTY 60
           MGSHWNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTY
Sbjct: 1   MGSHWNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTY 60

Query: 61  LIYNATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQK 120
           LIYNATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQK
Sbjct: 61  LIYNATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQK 120

Query: 121 VSKISLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKS 180
           VSKISLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKS
Sbjct: 121 VSKISLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKS 180

Query: 181 TEGFSIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQH 240
           TEGFSIGNILLDFLGGVTNYGQMATQSIDQG+ +++  N        VSIFFDLLFMVQH
Sbjct: 181 TEGFSIGNILLDFLGGVTNYGQMATQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFMVQH 240

Query: 241 YVLYRSKPIHHPSKVEDEANKEALLKSSDLPTSDLP 269
           YVLYRSKPIHHPSKVEDEANKEALLKSSDLPTSDLP
Sbjct: 241 YVLYRSKPIHHPSKVEDEANKEALLKSSDLPTSDLP 276

[Close]

BLAST of Spo16837.1 vs. NCBI nr
Match: gi|731363373|ref|XP_010693399.1| (PREDICTED: cystinosin homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 445.3 bits (1144), Expect = 7.700e-122
Identity = 230/276 (83.33%), Postives = 245/276 (88.77%), Query Frame = 1


		  
Query: 1   MGSHWNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTY 60
           MG+ WNS+PLEIIYQ FGWIAFFSWSISFYPQ+ILNFRRKSVVGLNFDFVVLNLTKHSTY
Sbjct: 1   MGTQWNSYPLEIIYQTFGWIAFFSWSISFYPQLILNFRRKSVVGLNFDFVVLNLTKHSTY 60

Query: 61  LIYNATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQK 120
           LIYNATLYFSSVVQ+QYRDKYG+ EMIPVAANDVAFSIHAV+LTAFTLFQI IYE GNQK
Sbjct: 61  LIYNATLYFSSVVQRQYRDKYGIGEMIPVAANDVAFSIHAVILTAFTLFQICIYERGNQK 120

Query: 121 VSKISLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKS 180
            SKIS  LV  AW AAAVCV +ALPSHSWLWLITVFNTIQV+MTVIKYIPQAFMNFYRKS
Sbjct: 121 FSKISFLLVFAAWGAAAVCVLIALPSHSWLWLITVFNTIQVTMTVIKYIPQAFMNFYRKS 180

Query: 181 TEGFSIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQH 240
           TEGFSI NILLDFLGGVTNY QMATQSIDQG+ +++  N        VSIFFDLLFM+QH
Sbjct: 181 TEGFSIANILLDFLGGVTNYAQMATQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFMLQH 240

Query: 241 YVLYRSKPIHHPSKVEDEANKEALLKSSDLPTSDLP 269
           YVLYRSKPI HP K+ DEANKE LLK+SD  TSDLP
Sbjct: 241 YVLYRSKPICHPLKL-DEANKEPLLKTSDPATSDLP 275

[Close]

BLAST of Spo16837.1 vs. NCBI nr
Match: gi|645248795|ref|XP_008230459.1| (PREDICTED: cystinosin homolog [Prunus mume])

HSP 1 Score: 380.9 bits (977), Expect = 1.800e-102
Identity = 196/270 (72.59%), Postives = 220/270 (81.48%), Query Frame = 1


		  
Query: 5   WNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYN 64
           WNS PLEI Y++ GW AF SWSISFYPQ+ILNFRRKSVVGLNFDFVVLNLTKHS+YLIYN
Sbjct: 4   WNSIPLEITYEVLGWAAFISWSISFYPQVILNFRRKSVVGLNFDFVVLNLTKHSSYLIYN 63

Query: 65  ATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKI 124
           ATLYFSS VQKQY +KYGL +MIPVAANDVAFSIHAVLLTA TL+QI IYE GNQKVSKI
Sbjct: 64  ATLYFSSAVQKQYFEKYGLGQMIPVAANDVAFSIHAVLLTAITLYQIAIYERGNQKVSKI 123

Query: 125 SLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGF 184
           S+ +V   W  AAVCVF+ALPSHSWLWLI++FN+IQV MTVIKYIPQA MNF RKST+GF
Sbjct: 124 SIGIVAAVWLGAAVCVFLALPSHSWLWLISIFNSIQVFMTVIKYIPQAVMNFLRKSTDGF 183

Query: 185 SIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQHYVLY 244
           SIGNILLDF GGV NY QMA QSIDQG+ +++  N        +SIFFDLLFM QHYVLY
Sbjct: 184 SIGNILLDFSGGVANYAQMAVQSIDQGSWVNFYGNIGKTLLSLISIFFDLLFMGQHYVLY 243

Query: 245 RSKPIHHPSKVEDEANKEALLKSSDLPTSD 267
           R K      K+  + + E L+KSSD P S+
Sbjct: 244 RGKRAVITPKIISKESAEPLVKSSDDPVSE 273

[Close]

BLAST of Spo16837.1 vs. NCBI nr
Match: gi|460376446|ref|XP_004234009.1| (PREDICTED: cystinosin homolog [Solanum lycopersicum])

HSP 1 Score: 374.8 bits (961), Expect = 1.300e-100
Identity = 194/265 (73.21%), Postives = 221/265 (83.40%), Query Frame = 1


		  
Query: 5   WNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYN 64
           WNS PLE++Y   GWIAFFSWSISFYPQ+ILNFRRKSVVGLNFDFVVLNLTKHS+YLIYN
Sbjct: 4   WNSIPLEVVYTSLGWIAFFSWSISFYPQVILNFRRKSVVGLNFDFVVLNLTKHSSYLIYN 63

Query: 65  ATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKI 124
           A+++FSSVVQKQYR+KYGL+EMIPVAANDVAFSIHAVLLTAFTLFQI IY+ G+QKVS+ 
Sbjct: 64  ASMFFSSVVQKQYREKYGLNEMIPVAANDVAFSIHAVLLTAFTLFQIAIYDRGSQKVSRT 123

Query: 125 SLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGF 184
           S+ +V VAW   AVCVF+ALPSHSWLWLI+ FNT+QV MTVIKYIPQA MNF RKST GF
Sbjct: 124 SIGIVCVAWLTVAVCVFIALPSHSWLWLISCFNTLQVVMTVIKYIPQAIMNFQRKSTIGF 183

Query: 185 SIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQHYVLY 244
           SIGNILLD LGGVTNYGQMA QSIDQ + +++  N        VSIFFD+LF++QHYVLY
Sbjct: 184 SIGNILLDLLGGVTNYGQMAVQSIDQNSWVNFYGNIGKTLLSLVSIFFDILFILQHYVLY 243

Query: 245 RSKPIHHPSKVEDEANKEALLKSSD 262
            +  I     V D   K+ LLK+SD
Sbjct: 244 PAWKIGTCRDV-DVIGKKPLLKTSD 267

[Close]

BLAST of Spo16837.1 vs. NCBI nr
Match: gi|565379230|ref|XP_006356031.1| (PREDICTED: cystinosin homolog [Solanum tuberosum])

HSP 1 Score: 373.2 bits (957), Expect = 3.700e-100
Identity = 193/265 (72.83%), Postives = 220/265 (83.02%), Query Frame = 1


		  
Query: 5   WNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYN 64
           WNS PLE++Y   GWIAFFSWSISFYPQ+ILNFRRKSVVGLNFDFVVLNLTKHS+YLIYN
Sbjct: 4   WNSIPLEVLYTSLGWIAFFSWSISFYPQVILNFRRKSVVGLNFDFVVLNLTKHSSYLIYN 63

Query: 65  ATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKI 124
           A+++FSSVVQKQYR+KYGL+EMIPVAANDVAFSIHAVLLTAFTLFQI IY+ GNQKVS+ 
Sbjct: 64  ASMFFSSVVQKQYREKYGLNEMIPVAANDVAFSIHAVLLTAFTLFQIAIYDRGNQKVSRT 123

Query: 125 SLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGF 184
           S+ +V VAW   AVCVF+ALPSHSWLWLI+ FNT+QV MTVIKYIPQA MNF RKST GF
Sbjct: 124 SVGIVCVAWLTVAVCVFIALPSHSWLWLISCFNTLQVVMTVIKYIPQAIMNFQRKSTIGF 183

Query: 185 SIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQHYVLY 244
           SIGNILLD LGGVT YGQMA QSIDQ + +++  N        VSIFFD+LF++QHYV+Y
Sbjct: 184 SIGNILLDLLGGVTTYGQMAMQSIDQNSWVNFYGNIGKTLLSLVSIFFDILFILQHYVIY 243

Query: 245 RSKPIHHPSKVEDEANKEALLKSSD 262
            +  I   S+  D   K  LLK+SD
Sbjct: 244 PAWKI-GTSRDVDVIGKRPLLKTSD 267

[Close]

BLAST of Spo16837.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNF2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_052430 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 3.600e-142
Identity = 261/276 (94.57%), Postives = 265/276 (96.01%), Query Frame = 1


		  
Query: 1   MGSHWNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTY 60
           MGSHWNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTY
Sbjct: 1   MGSHWNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTY 60

Query: 61  LIYNATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQK 120
           LIYNATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQK
Sbjct: 61  LIYNATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQK 120

Query: 121 VSKISLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKS 180
           VSKISLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKS
Sbjct: 121 VSKISLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKS 180

Query: 181 TEGFSIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQH 240
           TEGFSIGNILLDFLGGVTNYGQMATQSIDQG+ +++  N        VSIFFDLLFMVQH
Sbjct: 181 TEGFSIGNILLDFLGGVTNYGQMATQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFMVQH 240

Query: 241 YVLYRSKPIHHPSKVEDEANKEALLKSSDLPTSDLP 269
           YVLYRSKPIHHPSKVEDEANKEALLKSSDLPTSDLP
Sbjct: 241 YVLYRSKPIHHPSKVEDEANKEALLKSSDLPTSDLP 276

[Close]

BLAST of Spo16837.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E7N2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g047680 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 5.300e-122
Identity = 230/276 (83.33%), Postives = 245/276 (88.77%), Query Frame = 1


		  
Query: 1   MGSHWNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTY 60
           MG+ WNS+PLEIIYQ FGWIAFFSWSISFYPQ+ILNFRRKSVVGLNFDFVVLNLTKHSTY
Sbjct: 1   MGTQWNSYPLEIIYQTFGWIAFFSWSISFYPQLILNFRRKSVVGLNFDFVVLNLTKHSTY 60

Query: 61  LIYNATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQK 120
           LIYNATLYFSSVVQ+QYRDKYG+ EMIPVAANDVAFSIHAV+LTAFTLFQI IYE GNQK
Sbjct: 61  LIYNATLYFSSVVQRQYRDKYGIGEMIPVAANDVAFSIHAVILTAFTLFQICIYERGNQK 120

Query: 121 VSKISLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKS 180
            SKIS  LV  AW AAAVCV +ALPSHSWLWLITVFNTIQV+MTVIKYIPQAFMNFYRKS
Sbjct: 121 FSKISFLLVFAAWGAAAVCVLIALPSHSWLWLITVFNTIQVTMTVIKYIPQAFMNFYRKS 180

Query: 181 TEGFSIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQH 240
           TEGFSI NILLDFLGGVTNY QMATQSIDQG+ +++  N        VSIFFDLLFM+QH
Sbjct: 181 TEGFSIANILLDFLGGVTNYAQMATQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFMLQH 240

Query: 241 YVLYRSKPIHHPSKVEDEANKEALLKSSDLPTSDLP 269
           YVLYRSKPI HP K+ DEANKE LLK+SD  TSDLP
Sbjct: 241 YVLYRSKPICHPLKL-DEANKEPLLKTSDPATSDLP 275

[Close]

BLAST of Spo16837.1 vs. UniProtKB/TrEMBL
Match: K4BDT6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 8.900e-101
Identity = 194/265 (73.21%), Postives = 221/265 (83.40%), Query Frame = 1


		  
Query: 5   WNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYN 64
           WNS PLE++Y   GWIAFFSWSISFYPQ+ILNFRRKSVVGLNFDFVVLNLTKHS+YLIYN
Sbjct: 4   WNSIPLEVVYTSLGWIAFFSWSISFYPQVILNFRRKSVVGLNFDFVVLNLTKHSSYLIYN 63

Query: 65  ATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKI 124
           A+++FSSVVQKQYR+KYGL+EMIPVAANDVAFSIHAVLLTAFTLFQI IY+ G+QKVS+ 
Sbjct: 64  ASMFFSSVVQKQYREKYGLNEMIPVAANDVAFSIHAVLLTAFTLFQIAIYDRGSQKVSRT 123

Query: 125 SLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGF 184
           S+ +V VAW   AVCVF+ALPSHSWLWLI+ FNT+QV MTVIKYIPQA MNF RKST GF
Sbjct: 124 SIGIVCVAWLTVAVCVFIALPSHSWLWLISCFNTLQVVMTVIKYIPQAIMNFQRKSTIGF 183

Query: 185 SIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQHYVLY 244
           SIGNILLD LGGVTNYGQMA QSIDQ + +++  N        VSIFFD+LF++QHYVLY
Sbjct: 184 SIGNILLDLLGGVTNYGQMAVQSIDQNSWVNFYGNIGKTLLSLVSIFFDILFILQHYVLY 243

Query: 245 RSKPIHHPSKVEDEANKEALLKSSD 262
            +  I     V D   K+ LLK+SD
Sbjct: 244 PAWKIGTCRDV-DVIGKKPLLKTSD 267

[Close]

BLAST of Spo16837.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HT23_SOLCH (Putative cystinosin-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.000e-100
Identity = 193/265 (72.83%), Postives = 222/265 (83.77%), Query Frame = 1


		  
Query: 5   WNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYN 64
           WNS PLE++Y   GWIAFFSWSISFYPQ+I+NFRRKSVVGLNFDFVVLNLTKHS+YLIYN
Sbjct: 4   WNSIPLEVLYTSLGWIAFFSWSISFYPQVIMNFRRKSVVGLNFDFVVLNLTKHSSYLIYN 63

Query: 65  ATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKI 124
           A+++FSSVVQKQYR+KYGL+EMIPVAANDVAFSIHAVLLTAFTLFQI IY+ G+QKVS+ 
Sbjct: 64  ASMFFSSVVQKQYREKYGLNEMIPVAANDVAFSIHAVLLTAFTLFQIAIYDRGSQKVSRT 123

Query: 125 SLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGF 184
           S+ +V VAW   AVCVF+ALPSHSWLWLI+ FNT+QV MTVIKYIPQA MNF RKST GF
Sbjct: 124 SVGIVCVAWLTIAVCVFIALPSHSWLWLISCFNTLQVVMTVIKYIPQAIMNFQRKSTIGF 183

Query: 185 SIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQHYVLY 244
           SIGNILLD LGGVTNYGQMA QSIDQ + +++  N        VSIFFD+LF++QHYVLY
Sbjct: 184 SIGNILLDLLGGVTNYGQMAMQSIDQNSWVNFYGNIGKTLLSLVSIFFDILFILQHYVLY 243

Query: 245 RSKPIHHPSKVEDEANKEALLKSSD 262
            +  I   S+  D   K+ LLK+SD
Sbjct: 244 PAWKI-GTSRDVDVIGKKPLLKTSD 267

[Close]

BLAST of Spo16837.1 vs. UniProtKB/TrEMBL
Match: M1B1K2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013431 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.600e-100
Identity = 193/265 (72.83%), Postives = 220/265 (83.02%), Query Frame = 1


		  
Query: 5   WNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYN 64
           WNS PLE++Y   GWIAFFSWSISFYPQ+ILNFRRKSVVGLNFDFVVLNLTKHS+YLIYN
Sbjct: 4   WNSIPLEVLYTSLGWIAFFSWSISFYPQVILNFRRKSVVGLNFDFVVLNLTKHSSYLIYN 63

Query: 65  ATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKI 124
           A+++FSSVVQKQYR+KYGL+EMIPVAANDVAFSIHAVLLTAFTLFQI IY+ GNQKVS+ 
Sbjct: 64  ASMFFSSVVQKQYREKYGLNEMIPVAANDVAFSIHAVLLTAFTLFQIAIYDRGNQKVSRT 123

Query: 125 SLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGF 184
           S+ +V VAW   AVCVF+ALPSHSWLWLI+ FNT+QV MTVIKYIPQA MNF RKST GF
Sbjct: 124 SVGIVCVAWLTVAVCVFIALPSHSWLWLISCFNTLQVVMTVIKYIPQAIMNFQRKSTIGF 183

Query: 185 SIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQHYVLY 244
           SIGNILLD LGGVT YGQMA QSIDQ + +++  N        VSIFFD+LF++QHYV+Y
Sbjct: 184 SIGNILLDLLGGVTTYGQMAMQSIDQNSWVNFYGNIGKTLLSLVSIFFDILFILQHYVIY 243

Query: 245 RSKPIHHPSKVEDEANKEALLKSSD 262
            +  I   S+  D   K  LLK+SD
Sbjct: 244 PAWKI-GTSRDVDVIGKRPLLKTSD 267

[Close]

BLAST of Spo16837.1 vs. ExPASy Swiss-Prot
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 7.500e-93
Identity = 175/264 (66.29%), Postives = 208/264 (78.79%), Query Frame = 1


		  
Query: 5   WNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYN 64
           WNS PLEI Y+I GWIAF SWSISFYPQ+ILNFRR+SVVGLNFDFV+LNLTKHS+Y+IYN
Sbjct: 4   WNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYMIYN 63

Query: 65  ATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKI 124
             LYFS V+QKQY D YG  EMIPVAANDVAFSIHAV++TA TLFQIFIYE G QKVS++
Sbjct: 64  VCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRL 123

Query: 125 SLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGF 184
           ++ +V V W  AA+C F+ALP+HSWLWLI++FN+IQV MT +KYIPQA MNF RKST G+
Sbjct: 124 AIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGW 183

Query: 185 SIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQHYVLY 244
           SIGNILLDF GG+ NY QM  QSIDQ +  ++  N        +SIFFD+LFM QHYVLY
Sbjct: 184 SIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLY 243

Query: 245 RSKPIHHPSKVEDEANKEALLKSS 261
             K +    +  +E+N E L+ SS
Sbjct: 244 PEKKVSKSPETGEESN-EPLIDSS 266

[Close]

BLAST of Spo16837.1 vs. ExPASy Swiss-Prot
Match: CTNS_DICDI (Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.800e-54
Identity = 109/238 (45.80%), Postives = 160/238 (67.23%), Query Frame = 1


		  
Query: 10  LEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYNATLYF 69
           L II  I GWI F  WS+SFYPQ+ILNFR+K+V+GL+FDF++ N+T ++ Y ++N+ LYF
Sbjct: 4   LSIISIIIGWIYFACWSLSFYPQVILNFRKKNVIGLSFDFLLFNITGYACYSVFNSVLYF 63

Query: 70  SSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKISLTLV 129
             +V+ +Y DKYG    IPV  +D+AF+IH  +LTA T+ Q FIY+ GNQK SK+ + + 
Sbjct: 64  DKLVKNEYYDKYG--PPIPVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIA 123

Query: 130 TVAWCAAAVCVFVALPS-HSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGFSIGN 189
           T+ W +  V   +   +  +WLW+I  ++ +++ +T IKYIPQA++NF  KST G+S+ N
Sbjct: 124 TLIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNKSTSGWSVHN 183

Query: 190 ILLDFLGGVTNYGQMATQSIDQGALLSYS--------SNVSIFFDLLFMVQHYVLYRS 239
           +LLDF GGV +  QM     D G    ++        S  SI FD+LF++QHY+LYR+
Sbjct: 184 VLLDFSGGVLSLLQMFLDVADSGNWNIFTGDPVKLGLSLFSIAFDILFIIQHYILYRN 239

[Close]

BLAST of Spo16837.1 vs. ExPASy Swiss-Prot
Match: CTNS_HUMAN (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 3.900e-49
Identity = 112/243 (46.09%), Postives = 161/243 (66.26%), Query Frame = 1


		  
Query: 7   SFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYNAT 66
           S  + II Q+ GWI F +WSISFYPQ+I+N+RRKSV+GL+FDFV LNLT    Y ++N  
Sbjct: 120 SSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIG 179

Query: 67  LYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKISL 126
           L +   +++Q+  KY  + + PV +NDV FS+HAV+LT   + Q  +YE G Q+VS  ++
Sbjct: 180 LLWVPYIKEQFLLKYP-NGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAI 239

Query: 127 TLVTVAWCAAAVCVFV-ALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGFS 186
             + +AW  A V + V A+   +WL  +  F+ I++++T++KY PQA+MNFY KSTEG+S
Sbjct: 240 GFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWS 299

Query: 187 IGNILLDFLGGVTNYGQMATQSI--DQGALL-----SYSSNV-SIFFDLLFMVQHYVLYR 241
           IGN+LLDF GG  +  QM  QS   DQ  L+      +   V SI FD++F +QH+ LYR
Sbjct: 300 IGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYR 359

[Close]

BLAST of Spo16837.1 vs. ExPASy Swiss-Prot
Match: CTNS_BOVIN (Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.600e-49
Identity = 106/240 (44.17%), Postives = 159/240 (66.25%), Query Frame = 1


		  
Query: 10  LEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYNATLYF 69
           + II Q+ GWI F +WS+SFYPQ+I N+RRKSVVGL+FDFVVLNL     Y ++N  L++
Sbjct: 123 VSIINQVIGWIYFVAWSVSFYPQVITNWRRKSVVGLSFDFVVLNLMGFVAYSVFNIGLFW 182

Query: 70  SSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKISLTLV 129
              +++Q+  KY  + + PV +NDV FS+HAV LT   + Q  +YE G+Q+VS ++++ +
Sbjct: 183 VPSIKEQFLLKYP-NGVNPVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFL 242

Query: 130 TVAWCAAAVC-VFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGFSIGN 189
            ++W    +  +  A+ + +WL  +  F+ I++++T++KY PQA+MNF+ KSTEG+SIGN
Sbjct: 243 VLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYKSTEGWSIGN 302

Query: 190 ILLDFLGGVTNYGQMATQSI--DQGALLSYSSN------VSIFFDLLFMVQHYVLYRSKP 241
           +LLDF GG  +  QM  QS   DQ  L+            SI FD++F +QH+ LYR KP
Sbjct: 303 VLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGIFSIIFDVVFFIQHFCLYRKKP 361

[Close]

BLAST of Spo16837.1 vs. ExPASy Swiss-Prot
Match: CTNS_MOUSE (Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.300e-48
Identity = 109/240 (45.42%), Postives = 156/240 (65.00%), Query Frame = 1


		  
Query: 10  LEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYNATLYF 69
           + II Q+ GWI F +WS+SFYPQ+I N+RRKSV+GL+FDF+ LNLT    Y ++N  L +
Sbjct: 123 VSIINQVIGWIYFMAWSVSFYPQVIQNWRRKSVIGLSFDFLALNLTGFVAYSVFNIGLLW 182

Query: 70  SSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKISLTLV 129
              +Q+++  KY  + + PV +ND  FS+HAV LT   + Q  +YE GNQ+VS  S+  +
Sbjct: 183 VPYIQEEFLLKYP-NGVNPVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFL 242

Query: 130 TVAWCAAAVCVFV-ALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGFSIGN 189
            +AW    V + V A+   +WL  +  F+ I++ +T+IKY PQA+MNFY KST+G+SIG 
Sbjct: 243 VLAWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGG 302

Query: 190 ILLDFLGGVTNYGQMATQSI--DQGALL-----SYSSNV-SIFFDLLFMVQHYVLYRSKP 241
           +LLDF GG  +  QM  QS   DQ  L+      +   V +IFFD++F +QH+ LYR KP
Sbjct: 303 VLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFTIFFDVVFFIQHFYLYRKKP 361

[Close]

BLAST of Spo16837.1 vs. TAIR (Arabidopsis)
Match: AT5G40670.1 (PQ-loop repeat family protein / transmembrane family protein)

HSP 1 Score: 341.7 bits (875), Expect = 4.200e-94
Identity = 175/264 (66.29%), Postives = 208/264 (78.79%), Query Frame = 1


		  
Query: 5   WNSFPLEIIYQIFGWIAFFSWSISFYPQIILNFRRKSVVGLNFDFVVLNLTKHSTYLIYN 64
           WNS PLEI Y+I GWIAF SWSISFYPQ+ILNFRR+SVVGLNFDFV+LNLTKHS+Y+IYN
Sbjct: 4   WNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYMIYN 63

Query: 65  ATLYFSSVVQKQYRDKYGLDEMIPVAANDVAFSIHAVLLTAFTLFQIFIYEGGNQKVSKI 124
             LYFS V+QKQY D YG  EMIPVAANDVAFSIHAV++TA TLFQIFIYE G QKVS++
Sbjct: 64  VCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRL 123

Query: 125 SLTLVTVAWCAAAVCVFVALPSHSWLWLITVFNTIQVSMTVIKYIPQAFMNFYRKSTEGF 184
           ++ +V V W  AA+C F+ALP+HSWLWLI++FN+IQV MT +KYIPQA MNF RKST G+
Sbjct: 124 AIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGW 183

Query: 185 SIGNILLDFLGGVTNYGQMATQSIDQGALLSYSSN--------VSIFFDLLFMVQHYVLY 244
           SIGNILLDF GG+ NY QM  QSIDQ +  ++  N        +SIFFD+LFM QHYVLY
Sbjct: 184 SIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLY 243

Query: 245 RSKPIHHPSKVEDEANKEALLKSS 261
             K +    +  +E+N E L+ SS
Sbjct: 244 PEKKVSKSPETGEESN-EPLIDSS 266

The following BLAST results are available for this feature:

BLAST of Spo16837.1 vs. NCBI nr
BLAST of Spo16837.1 vs. UniProtKB/TrEMBL
BLAST of Spo16837.1 vs. ExPASy Swiss-Prot
BLAST of Spo16837.1 vs. TAIR (Arabidopsis)

BLAST of Spo16837.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902226659\|gb\|KNA20439.1\|	5.1e-142	94.5	hypothetical protein SOVF_0524...	[more]
gi\|731363373\|ref\|XP_010693399.1\|	7.7e-122	83.3	PREDICTED: cystinosin homolog ...	[more]
gi\|645248795\|ref\|XP_008230459.1\|	1.8e-102	72.5	PREDICTED: cystinosin homolog ...	[more]
gi\|460376446\|ref\|XP_004234009.1\|	1.3e-100	73.2	PREDICTED: cystinosin homolog ...	[more]
gi\|565379230\|ref\|XP_006356031.1\|	3.7e-100	72.8	PREDICTED: cystinosin homolog ...	[more]

BLAST of Spo16837.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RNF2_SPIOL	3.6e-142	94.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8E7N2_BETVU	5.3e-122	83.3	Uncharacterized protein OS=Bet...	[more]
K4BDT6_SOLLC	8.9e-101	73.2	Uncharacterized protein OS=Sol...	[more]
A0A0V0HT23_SOLCH	2.0e-100	72.8	Putative cystinosin-like OS=So...	[more]
M1B1K2_SOLTU	2.6e-100	72.8	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo16837.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CTNS_ARATH	7.5e-93	66.2	Cystinosin homolog OS=Arabidop...	[more]
CTNS_DICDI	1.8e-54	45.8	Cystinosin homolog OS=Dictyost...	[more]
CTNS_HUMAN	3.9e-49	46.0	Cystinosin OS=Homo sapiens GN=...	[more]
CTNS_BOVIN	6.6e-49	44.1	Cystinosin OS=Bos taurus GN=CT...	[more]
CTNS_MOUSE	7.3e-48	45.4	Cystinosin OS=Mus musculus GN=...	[more]

BLAST of Spo16837.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G40670.1	4.2e-94	66.2	PQ-loop repeat family protein ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005282	Lysosomal cystine transporter	PANTHER	PTHR13131	CYSTINOSIN	coord: 5..254 score: 2.0E
IPR005282	Lysosomal cystine transporter	TIGRFAMs	TIGR00951	TIGR00951	coord: 12..236 score: 1.5
IPR006603	PQ-loop repeat	PFAM	PF04193	PQ-loop	coord: 14..70 score: 2.8E-19coord: 153..207 score: 3.3
IPR006603	PQ-loop repeat	SMART	SM00679	ctns	coord: 27..58 score: 1.4E-7coord: 166..197 score: 3.
None	No IPR available	PANTHER	PTHR13131:SF5	CYSTINE TRANSPORTER	coord: 5..254 score: 2.0E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo05136	0.78	Barchart \| Table
Spo04503	0.75	Barchart \| Table