Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGACTAAAAACAAAGTCATTTGAAAGAACGAAGGTGGTCAACAGTAATTGAAATGAGAGCAGCATCACTTTCACTGCCATTTCATAAATTCCTTTCTAACCCAACACTCATTGTCAGGTCTGTCACTCACACTCCCTCTGTTCTCCGCACCTCCATCTCAACTGGTCCCTGCATCGCCGCCATTTCTTCCATAATTAGGGTTTCGACCATGTCGGCGGGAGCTGGTTCAGGGGATAACAACATCGGCGTCGTCGAATTCGCCTTATCTTCTTCATGTCGCCTCAAGATTCAGAAGGGTGATATCACTCAGTGGTCCGTTGATGGTTCCTCTGACGCCATTGTTAGTCCTCTCTCTTTCTTTCTCCTCCTTTCTTTTGCGTTTGCTTTCATCTTGCAACCTTGCATGTTGATCAATTTGTTATGTTGATTCGATTGTGCATTTCGACTTTTCGCGATTAACATTTAACAATGTTTGAGTTGATCATGCATTGATTTTCCATTATTCTCTTTGTTTTTGGTTGATTGGATCGCAGGTTTGTATCGGTACTTGTTAGCAATGGGTTGGTATACCAATATCATACTAGTCTTAGTACCAATGCCAAATTAATATGGCTACAAATACGAGACACTTGTGTCCATATGGACACAAGCCAATTGAGGCCAAGACTTCCTCGGAAACCAAGTGCTTTTAAGTTTTAACTACTTAATTCAAGTTTGTTGTTTTGCATGTTTCTGCTGTATAATTGAGTTAGAAATGCCTTACATTCCCCATGAGGCCATGAATATTCGAGTAGAGAAGCTAAATGTAGAAATATTAACTGTTAAATGAGCATTACAATGTCGAAGGACCAACTCAACCACAACTTTAAGTTGGTGGTTGAAGCCCCAAGATTAGCTGTATACTCTATCACGCCCCTTACATGAAAGCCTTTTGGGCTTGAAGTGTGGTTGCAACATAGCCTCCCCATATCCACCGCTAAAAATTGCACTATGAATGGAGTAGATGAAATTTGAACTCGTGACCTTTGTGTCACGCCGATTCTGTTACCATGTCAAAGGACCAACTCAACCGAAAACTTAGGCTGATGGTTGAAGCCCAAACATTAGTTTTATACTCTATCATACAACACCGATAAACGTGTGAATTTGTCGTGAATTCTGAAATTAAAACCGTGTTAGGAAACATATTTGATGCCTAGGTATAACCCGTACGACACGTTTGGAAGCCAATAATAAATTGTGGAATGAGAATAAAGGTAAATATTATTTGGCAAGAAAATAACACCATGATAATGAAACCTTATCTCAAACTTGGTTTTTCCCTCATAAATTTGCATTCCACCCGATACCACTTCCCAAATGGTAATGGATGGTAACGGAAATTTATGAGGAGAAAAGAGATAATTTTGAGTGAACTAGCATTACCACGGGAATGGATATTGATTTTCCTTACAAATTCATTCCTATTGAATTTATGGCCGGCTACCAAATGGACCGTTAGGGTCACGTAAAGCAAATACCTTGACATGATACCAGTTACCAACTCTGATTTCATGCTAAAGTACTTTTAGTTAGCCCGATACAGAACAATACTCGAAAATCCCTAACCAGAGCTTCAATGTTAACAGGGTCAATATAAGTTGTGAGGCTCTTTCCTAGAAATTCTAGTGGTTGGAGATAAAATGTACAACAATTGCCCATTATAGAGATGTTTTAGATCCTTGGTGTGTGATGGATGTAGCTTCTCTTATCCCATTTGGAAGTGATACATTGGGGTTATTATTAACAAAAAGGTTCCTCTTTCTTTACGAGTTCACTTCCTCGTGATAAGTTAGTTGGTGACGACTTGGTTCTAAAAAATCAAAGCACGATCTATGTAGAATTTTTTAGTTTTTTCTCAATTAATTTTATCAGGTGTATTACACATTCTTGTACCTTGAGTCAATTATTGTCTTTTGATTTAAAGAAGCCTTGGTTTGATAGGTCAATGCTGCTAATGAGAGAATGCTAGGTGGTGGCGGTGTAGATGGAGGTACATTAATCATTGGTAATTCTATGAATTAACCAGATAGGCTAAATTTGATTTTGACATGTTTGAAGAATCTGCATTTGTCTTTGTTCAGCCATACATAGAGCTGCAGGTCCAGAACTTAAAGAAGCATGTTATAAAGTACCTGAGGATCGCCCTGGAGTTCGCTGTCCTACTGGAGAAGCGCGGATCACTCCGTATGTACCTAAAGTTTCCTGTTTGTAAACTTAATATATGTGACATTTTTTTCTTTTTATGTTGGGTATGTCATTTCATTTACTAACATATTAACACTACCTTGCAGTGGTTTCAGATTAGCTGCATCTCATGTAATCCACACTGTTGGGCCCATATATGATGTTGACAAAAGTCCCGAGGCCTCATTGAAGAATGCTTACAGGTATTACTTTTGTTCCTCAATATATGTCATTGGTCAGGATTATTTTTCTCAATAATTGAGTAAGTTTTCAACTTATGTTTGTGCAGAAATAGTTTGGTTGTTGCGAAAGAGAAAAATATTCAATACATTGCCTTCCCTGCCATATCTTGTGGTGTTTACGGGTAAGTAGCCTGAGTTAAACCATGATACTGATTCAATAACTTGTTCTCTTTTAGCAATAAGTTGTATAAAATATTCATAGAATTTCCTGTTAGTGCTGAAGGAAGTTTACTTTAGAATATGACCTTCCTAGCAGCAGCGGAGGAGCTTATATTTGGCGCAAGTCTCACTTGTTATCAATAATATATTTTATGTGCATCAAAAGCATTGGCATACTTCAAAGTTTGTGTCCCATGAATTTCAATGTTGGCTAACATTTTGCAACATATTGATTATTGAATATCAAGTTTGTAATATTGTTCTATGGATCACTATAGGCTGCTGAGATGTTATCACTCTTTTACCTGTATAACTTGGTAAGGATTTTATCTTTTGCAGATATCCTTATGACAAAGCAGCCAGTGTAGCCATTTCCACAGTTAAAGAATTTGCCAACGGCTTGAAGGAGGTACGGAATTTCTCATGAAAGTCTGGTTTGTATGGAGTAGTTTCTTGTCAATTTCTGTTCACTCTCATGTTAAGGCAACAATATTAAGAAGCAGGTGAATCATGCATTTTTCATGGAGCAAGGAACTTTCACATGTAGTATAAGACATTCTTCATTATGCATATTTTTCTAATTGAAATTGGTAATAAGCTTCGATATCTGGAGTCATGGATTCCGTTATTTGATAACCTACTCCCTTCCCTCGATCTCCACCTTTTTTTTTTTTTTTTTNTGGATTCCGTTATTTGATAACCTACTCCCTTCCCTCGATCTCCACCTTTTTTTTTTTTTTTTTTTGTTTTTTGGTTGGATAGAATGATAGATAGCAAACATTCGTGTCATGATTTGCTGCAAGCTGTAGTGGGCATTATATTAAAATGGCTGCTTTATAATCAGATGATAACAATGAACTTTAAATAACACACTAGAATACTTACGAGGTTGATCTTAATCTCTATCCAGGTTTATTTTGTACTGTTCTCAGATGACATCTACGATGTTTGGTTGGAGAAAGCAAAGGTGCTTGTTGGAAACTAGGGTTATTCTTCTCAACTTGAGAAATGTACTTCAGACTGTTGCCAGCATTGAAGTTGACATCGAGTTGCTGAGGAAACATGTATAAATAAGCATTTACAGTATGACACTATATGTAATACCTTCTGTTGTGAAGTTTAGATTGCTGTCTAACAATATAATATATTCATTGCCACTCTGGTTTCTCTATATATAACCCACACAACAGTTGTAGACTCTGGTCTGAGGCATCGGGGTTTCTACATGGGCTTGCCAACAAACATTAAAGTATGCCAATTCATGGCTTGGAGCAATATCACAGCGAAAAGTTAACCTCAACATCATATAAACATGCATACCAAAGAAATGTTGCTTTAGTTCCTATGCTGTTTGAAAGAATTTAAACAGAGAACAATTAAAATGCTTAGAAACAAAGTTTTCGAATTCAGAATTCTAAGAAAAGACTAGCAACATCCTATACAAATTGGTGTAATGGTCATTCATCTTTGTCCTTTGATGTACTTGTGGAGAGTCTTCTAACAATATCCTCATCAACAACTTTGTATTGCCTGGAGAATCTCTGGTGTACAAAACCAGCAAATTTGTCAATATGTTCTTCATATCTGCTATACAGAGCTGGAACTGTAAC TATGACTAAAAACAAAGTCATTTGAAAGAACGAAGGTGGTCAACAGTAATTGAAATGAGAGCAGCATCACTTTCACTGCCATTTCATAAATTCCTTTCTAACCCAACACTCATTGTCAGGTCTGTCACTCACACTCCCTCTGTTCTCCGCACCTCCATCTCAACTGGTCCCTGCATCGCCGCCATTTCTTCCATAATTAGGGTTTCGACCATGTCGGCGGGAGCTGGTTCAGGGGATAACAACATCGGCGTCGTCGAATTCGCCTTATCTTCTTCATGTCGCCTCAAGATTCAGAAGGGTGATATCACTCAGTGGTCCGTTGATGGTTCCTCTGACGCCATTGTCAATGCTGCTAATGAGAGAATGCTAGGTGGTGGCGGTGTAGATGGAGCCATACATAGAGCTGCAGGTCCAGAACTTAAAGAAGCATGTTATAAAGTACCTGAGGATCGCCCTGGAGTTCGCTGTCCTACTGGAGAAGCGCGGATCACTCCTGGTTTCAGATTAGCTGCATCTCATGTAATCCACACTGTTGGGCCCATATATGATGTTGACAAAAGTCCCGAGGCCTCATTGAAGAATGCTTACAGAAATAGTTTGGTTGTTGCGAAAGAGAAAAATATTCAATACATTGCCTTCCCTGCCATATCTTGTGGTGTTTACGGATATCCTTATGACAAAGCAGCCAGTGTAGCCATTTCCACAGTTAAAGAATTTGCCAACGGCTTGAAGGAGGTTTATTTTGTACTGTTCTCAGATGACATCTACGATGTTTGGTTGGAGAAAGCAAAGGTGCTTGTTGGAAACTAGGGTTATTCTTCTCAACTTGAGAAATGTACTTCAGACTGTTGCCAGCATTGAAGTTGACATCGAGTTGCTGAGGAAACATGTATAAATAAGCATTTACAGTATGACACTATATGTAATACCTTCTGTTGTGAAGTTTAGATTGCTGTCTAACAATATAATATATTCATTGCCACTCTGGTTTCTCTATATATAACCCACACAACAGTTGTAGACTCTGGTCTGAGGCATCGGGGTTTCTACATGGGCTTGCCAACAAACATTAAAGTATGCCAATTCATGGCTTGGAGCAATATCACAGCGAAAAGTTAACCTCAACATCATATAAACATGCATACCAAAGAAATGTTGCTTTAGTTCCTATGCTGTTTGAAAGAATTTAAACAGAGAACAATTAAAATGCTTAGAAACAAAGTTTTCGAATTCAGAATTCTAAGAAAAGACTAGCAACATCCTATACAAATTGGTGTAATGGTCATTCATCTTTGTCCTTTGATGTACTTGTGGAGAGTCTTCTAACAATATCCTCATCAACAACTTTGTATTGCCTGGAGAATCTCTGGTGTACAAAACCAGCAAATTTGTCAATATGTTCTTCATATCTGCTATACAGAGCTGGAACTGTAAC ATGAGAGCAGCATCACTTTCACTGCCATTTCATAAATTCCTTTCTAACCCAACACTCATTGTCAGGTCTGTCACTCACACTCCCTCTGTTCTCCGCACCTCCATCTCAACTGGTCCCTGCATCGCCGCCATTTCTTCCATAATTAGGGTTTCGACCATGTCGGCGGGAGCTGGTTCAGGGGATAACAACATCGGCGTCGTCGAATTCGCCTTATCTTCTTCATGTCGCCTCAAGATTCAGAAGGGTGATATCACTCAGTGGTCCGTTGATGGTTCCTCTGACGCCATTGTCAATGCTGCTAATGAGAGAATGCTAGGTGGTGGCGGTGTAGATGGAGCCATACATAGAGCTGCAGGTCCAGAACTTAAAGAAGCATGTTATAAAGTACCTGAGGATCGCCCTGGAGTTCGCTGTCCTACTGGAGAAGCGCGGATCACTCCTGGTTTCAGATTAGCTGCATCTCATGTAATCCACACTGTTGGGCCCATATATGATGTTGACAAAAGTCCCGAGGCCTCATTGAAGAATGCTTACAGAAATAGTTTGGTTGTTGCGAAAGAGAAAAATATTCAATACATTGCCTTCCCTGCCATATCTTGTGGTGTTTACGGATATCCTTATGACAAAGCAGCCAGTGTAGCCATTTCCACAGTTAAAGAATTTGCCAACGGCTTGAAGGAGGTTTATTTTGTACTGTTCTCAGATGACATCTACGATGTTTGGTTGGAGAAAGCAAAGGTGCTTGTTGGAAACTAG MRAASLSLPFHKFLSNPTLIVRSVTHTPSVLRTSISTGPCIAAISSIIRVSTMSAGAGSGDNNIGVVEFALSSSCRLKIQKGDITQWSVDGSSDAIVNAANERMLGGGGVDGAIHRAAGPELKEACYKVPEDRPGVRCPTGEARITPGFRLAASHVIHTVGPIYDVDKSPEASLKNAYRNSLVVAKEKNIQYIAFPAISCGVYGYPYDKAASVAISTVKEFANGLKEVYFVLFSDDIYDVWLEKAKVLVGN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16880.1 vs. NCBI nr
Match: gi|902236192|gb|KNA24259.1| (hypothetical protein SOVF_016230 [Spinacia oleracea]) HSP 1 Score: 494.6 bits (1272), Expect = 1.000e-136 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1
BLAST of Spo16880.1 vs. NCBI nr
Match: gi|731320101|ref|XP_010670626.1| (PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 340.5 bits (872), Expect = 2.500e-90 Identity = 183/242 (75.62%), Postives = 202/242 (83.47%), Query Frame = 1
BLAST of Spo16880.1 vs. NCBI nr
Match: gi|698519067|ref|XP_009804400.1| (PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform X2 [Nicotiana sylvestris]) HSP 1 Score: 317.0 bits (811), Expect = 2.900e-83 Identity = 171/249 (68.67%), Postives = 191/249 (76.71%), Query Frame = 1
BLAST of Spo16880.1 vs. NCBI nr
Match: gi|747060327|ref|XP_011076590.1| (PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform X1 [Sesamum indicum]) HSP 1 Score: 310.8 bits (795), Expect = 2.100e-81 Identity = 157/199 (78.89%), Postives = 171/199 (85.93%), Query Frame = 1
BLAST of Spo16880.1 vs. NCBI nr
Match: gi|661882332|emb|CDP13912.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 308.9 bits (790), Expect = 8.000e-81 Identity = 155/206 (75.24%), Postives = 175/206 (84.95%), Query Frame = 1
BLAST of Spo16880.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZA3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016230 PE=4 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 7.200e-137 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1
BLAST of Spo16880.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CT56_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g042690 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.700e-90 Identity = 183/242 (75.62%), Postives = 202/242 (83.47%), Query Frame = 1
BLAST of Spo16880.1 vs. UniProtKB/TrEMBL
Match: A0A068V021_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039051001 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 5.600e-81 Identity = 155/206 (75.24%), Postives = 175/206 (84.95%), Query Frame = 1
BLAST of Spo16880.1 vs. UniProtKB/TrEMBL
Match: A0A059A9M6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00121 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 6.200e-80 Identity = 158/234 (67.52%), Postives = 183/234 (78.21%), Query Frame = 1
BLAST of Spo16880.1 vs. UniProtKB/TrEMBL
Match: A0A022PUM2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011873mg PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.800e-79 Identity = 151/202 (74.75%), Postives = 171/202 (84.65%), Query Frame = 1
BLAST of Spo16880.1 vs. ExPASy Swiss-Prot
Match: Y3184_XANCP (Macro domain-containing protein XCC3184 OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=XCC3184 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.400e-40 Identity = 87/170 (51.18%), Postives = 113/170 (66.47%), Query Frame = 1
BLAST of Spo16880.1 vs. ExPASy Swiss-Prot
Match: Y3343_XANAC (Macro domain-containing protein XAC3343 OS=Xanthomonas axonopodis pv. citri (strain 306) GN=XAC3343 PE=3 SV=2) HSP 1 Score: 164.9 bits (416), Expect = 1.200e-39 Identity = 84/170 (49.41%), Postives = 113/170 (66.47%), Query Frame = 1
BLAST of Spo16880.1 vs. ExPASy Swiss-Prot
Match: Y4103_VIBPA (Macro domain-containing protein VPA0103 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VPA0103 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 9.900e-39 Identity = 86/165 (52.12%), Postives = 110/165 (66.67%), Query Frame = 1
BLAST of Spo16880.1 vs. ExPASy Swiss-Prot
Match: Y2219_CHLTE (Macro domain-containing protein CT2219 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) GN=CT2219 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.000e-35 Identity = 87/165 (52.73%), Postives = 113/165 (68.48%), Query Frame = 1
BLAST of Spo16880.1 vs. ExPASy Swiss-Prot
Match: Y4133_LEPIN (Macro domain-containing protein LA_4133 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) GN=LA_4133 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.300e-35 Identity = 83/170 (48.82%), Postives = 114/170 (67.06%), Query Frame = 1
BLAST of Spo16880.1 vs. TAIR (Arabidopsis)
Match: AT2G40600.1 (appr-1-p processing enzyme family protein) HSP 1 Score: 284.6 bits (727), Expect = 5.700e-77 Identity = 145/220 (65.91%), Postives = 177/220 (80.45%), Query Frame = 1
BLAST of Spo16880.1 vs. TAIR (Arabidopsis)
Match: AT1G69340.1 (appr-1-p processing enzyme family protein) HSP 1 Score: 78.6 bits (192), Expect = 6.200e-15 Identity = 60/176 (34.09%), Postives = 86/176 (48.86%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16880.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo16880.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo16880.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo16880.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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