Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTAACCTTAACTTTATTCAATTGTAACATCTTAAACGTCGGTTTCCTTAACCACAAGAGCAGGTCCAAACCACAACAATAGTCAAAAAGAAAGAACAATAATGCACAACTTGCTACAACTTCCAGATCAAAAGCTTCCCCAATAAAACATTCTGTAAGAAAAATTTAAATGCAAATTTTCATCTGAACACAAAACAGAACAGAACAGAAATGGAGGAGGTGAGACTGCTGGGAGTTTGGTCTAGTGTTTACTGTCACAGAGTTATCTGGGCTCTAAAACTCAAGGGAGTCGACTATGATTATATCGAAGAAGATTTAGCAAACAAGAGCAATGATCTTATACGATATAATCCAGTGCATCAGAGGATACCAGTCTTTCTTCATAATGGAAAACCTATTGTGGAATCCATTATTATTCTTGAGTATATCAATGAGATTTGGCCTCAGAATCCACTGCTTCCAGCTGACCCTTATGAGAAGGCCAAAGCACGATTTTGGGCAAAATTTCTAGAAGATAAGGTAACTTTAAGGTTTTTCCCCTTTTCCCAATATTTTTGTTAAAATGAAAGTCACTTTTTCCTGATCGACTACTTAGTTCAGAAAATCAACAAACATAAAAAAATCAACACATTGATTAAACGGGAAATGATTTTGACCACCAAACCCTTGTGAGAGCACAGTTTTGAGTGCGTTACTCACAAGGAGGTGTGCCAAAATCAATCTCCAATTTAACAGCTAACTTACTATGTTCACAAAGTGACATAACTGATATGTGATAACACAATCTCAGAAAATTGTCTACTGAATTAAGGAATATTATGGATAGAAAAGTAAAATAAATAACTTTTTTCGTCCAAATACAATAAAGTATACTTGGATCTTGCAAATTATTCAAGCAAAAAGTATCAAACATGACATTTCAAAAGATTTTGTATGCCCAAGTCGATCTTACAAATAAATGAATAATACAGAGCCCGACCTTCTATACTTATTTCCAAGCTGTCGGGGAAGAGCAAGAGAAGCTGGCAAATGAAGCTAAAGAATTGCTTCGAATAATAGAAGAGAAAGGATTAGGAGAAAACAATTTTTTTGGTGGGAATCAAATTGGGCTAACTGATCTATGCTTGGGATGGATTGCTTGCTGGCTGGAATTAATGCAAGAAGCAGCGGGAATCAAACTACTGGAATCTGATAACCTTCCCAGGTTGCTGGCTTGGAGCGAGAGATTTAAACAAGTCCCAGAGATCAAAGAGTGCCTACCAGATAGGGTTAAGATGCTGGCCTACTTCCGAAAGTTAAGAGAGAGATTTACTGCACCCTGATCGAAGGAGAATATTTTTTCCTAATATTGGGAGTTCATTTCGCAGAGAAAATTATCCTAG TCTAACCTTAACTTTATTCAATTGTAACATCTTAAACGTCGGTTTCCTTAACCACAAGAGCAGGTCCAAACCACAACAATAGTCAAAAAGAAAGAACAATAATGCACAACTTGCTACAACTTCCAGATCAAAAGCTTCCCCAATAAAACATTCTGTAAGAAAAATTTAAATGCAAATTTTCATCTGAACACAAAACAGAACAGAACAGAAATGGAGGAGGTGAGACTGCTGGGAGTTTGGTCTAGTGTTTACTGTCACAGAGTTATCTGGGCTCTAAAACTCAAGGGAGTCGACTATGATTATATCGAAGAAGATTTAGCAAACAAGAGCAATGATCTTATACGATATAATCCAGTGCATCAGAGGATACCAGTCTTTCTTCATAATGGAAAACCTATTGTGGAATCCATTATTATTCTTGAGTATATCAATGAGATTTGGCCTCAGAATCCACTGCTTCCAGCTGACCCTTATGAGAAGGCCAAAGCACGATTTTGGGCAAAATTTCTAGAAGATAAGAGCCCGACCTTCTATACTTATTTCCAAGCTGTCGGGGAAGAGCAAGAGAAGCTGGCAAATGAAGCTAAAGAATTGCTTCGAATAATAGAAGAGAAAGGATTAGGAGAAAACAATTTTTTTGGTGGGAATCAAATTGGGCTAACTGATCTATGCTTGGGATGGATTGCTTGCTGGCTGGAATTAATGCAAGAAGCAGCGGGAATCAAACTACTGGAATCTGATAACCTTCCCAGGTTGCTGGCTTGGAGCGAGAGATTTAAACAAGTCCCAGAGATCAAAGAGTGCCTACCAGATAGGAGAAAATTATCCTAG ATGGAGGAGGTGAGACTGCTGGGAGTTTGGTCTAGTGTTTACTGTCACAGAGTTATCTGGGCTCTAAAACTCAAGGGAGTCGACTATGATTATATCGAAGAAGATTTAGCAAACAAGAGCAATGATCTTATACGATATAATCCAGTGCATCAGAGGATACCAGTCTTTCTTCATAATGGAAAACCTATTGTGGAATCCATTATTATTCTTGAGTATATCAATGAGATTTGGCCTCAGAATCCACTGCTTCCAGCTGACCCTTATGAGAAGGCCAAAGCACGATTTTGGGCAAAATTTCTAGAAGATAAGAGCCCGACCTTCTATACTTATTTCCAAGCTGTCGGGGAAGAGCAAGAGAAGCTGGCAAATGAAGCTAAAGAATTGCTTCGAATAATAGAAGAGAAAGGATTAGGAGAAAACAATTTTTTTGGTGGGAATCAAATTGGGCTAACTGATCTATGCTTGGGATGGATTGCTTGCTGGCTGGAATTAATGCAAGAAGCAGCGGGAATCAAACTACTGGAATCTGATAACCTTCCCAGGTTGCTGGCTTGGAGCGAGAGATTTAAACAAGTCCCAGAGATCAAAGAGTGCCTACCAGATAGGAGAAAATTATCCTAG MEEVRLLGVWSSVYCHRVIWALKLKGVDYDYIEEDLANKSNDLIRYNPVHQRIPVFLHNGKPIVESIIILEYINEIWPQNPLLPADPYEKAKARFWAKFLEDKSPTFYTYFQAVGEEQEKLANEAKELLRIIEEKGLGENNFFGGNQIGLTDLCLGWIACWLELMQEAAGIKLLESDNLPRLLAWSERFKQVPEIKECLPDRRKLS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16930.1 vs. NCBI nr
Match: gi|902219985|gb|KNA18461.1| (hypothetical protein SOVF_070550 [Spinacia oleracea]) HSP 1 Score: 426.0 bits (1094), Expect = 3.700e-116 Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 1
BLAST of Spo16930.1 vs. NCBI nr
Match: gi|731347111|ref|XP_010684813.1| (PREDICTED: glutathione transferase GST 23-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 372.9 bits (956), Expect = 3.700e-100 Identity = 173/204 (84.80%), Postives = 190/204 (93.14%), Query Frame = 1
BLAST of Spo16930.1 vs. NCBI nr
Match: gi|731347115|ref|XP_010684816.1| (PREDICTED: glutathione transferase GST 23-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 358.2 bits (918), Expect = 9.500e-96 Identity = 162/204 (79.41%), Postives = 187/204 (91.67%), Query Frame = 1
BLAST of Spo16930.1 vs. NCBI nr
Match: gi|703082034|ref|XP_010091847.1| (Glutathione transferase GST 23 [Morus notabilis]) HSP 1 Score: 300.4 bits (768), Expect = 2.300e-78 Identity = 132/205 (64.39%), Postives = 168/205 (81.95%), Query Frame = 1
BLAST of Spo16930.1 vs. NCBI nr
Match: gi|225437908|ref|XP_002267733.1| (PREDICTED: probable glutathione S-transferase [Vitis vinifera]) HSP 1 Score: 299.3 bits (765), Expect = 5.200e-78 Identity = 136/203 (67.00%), Postives = 162/203 (79.80%), Query Frame = 1
BLAST of Spo16930.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RG41_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_070550 PE=3 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 2.600e-116 Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 1
BLAST of Spo16930.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ERS7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g166450 PE=3 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 2.600e-100 Identity = 173/204 (84.80%), Postives = 190/204 (93.14%), Query Frame = 1
BLAST of Spo16930.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BX83_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g166460 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 6.600e-96 Identity = 162/204 (79.41%), Postives = 187/204 (91.67%), Query Frame = 1
BLAST of Spo16930.1 vs. UniProtKB/TrEMBL
Match: W9QPE3_9ROSA (Glutathione transferase GST 23 OS=Morus notabilis GN=L484_015916 PE=3 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.600e-78 Identity = 132/205 (64.39%), Postives = 168/205 (81.95%), Query Frame = 1
BLAST of Spo16930.1 vs. UniProtKB/TrEMBL
Match: F6HZU0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g04870 PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.600e-78 Identity = 136/203 (67.00%), Postives = 162/203 (79.80%), Query Frame = 1
BLAST of Spo16930.1 vs. ExPASy Swiss-Prot
Match: GST23_MAIZE (Glutathione transferase GST 23 OS=Zea mays PE=2 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.200e-53 Identity = 97/204 (47.55%), Postives = 142/204 (69.61%), Query Frame = 1
BLAST of Spo16930.1 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 5.400e-51 Identity = 96/205 (46.83%), Postives = 136/205 (66.34%), Query Frame = 1
BLAST of Spo16930.1 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 9.300e-51 Identity = 95/205 (46.34%), Postives = 134/205 (65.37%), Query Frame = 1
BLAST of Spo16930.1 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 4.600e-50 Identity = 95/206 (46.12%), Postives = 139/206 (67.48%), Query Frame = 1
BLAST of Spo16930.1 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 6.000e-50 Identity = 94/205 (45.85%), Postives = 134/205 (65.37%), Query Frame = 1
BLAST of Spo16930.1 vs. TAIR (Arabidopsis)
Match: AT3G09270.1 (glutathione S-transferase TAU 8) HSP 1 Score: 183.0 bits (463), Expect = 1.900e-46 Identity = 92/207 (44.44%), Postives = 133/207 (64.25%), Query Frame = 1
BLAST of Spo16930.1 vs. TAIR (Arabidopsis)
Match: AT2G29420.1 (glutathione S-transferase tau 7) HSP 1 Score: 181.0 bits (458), Expect = 7.300e-46 Identity = 83/202 (41.09%), Postives = 134/202 (66.34%), Query Frame = 1
BLAST of Spo16930.1 vs. TAIR (Arabidopsis)
Match: AT2G29450.1 (glutathione S-transferase tau 5) HSP 1 Score: 180.6 bits (457), Expect = 9.600e-46 Identity = 87/206 (42.23%), Postives = 138/206 (66.99%), Query Frame = 1
BLAST of Spo16930.1 vs. TAIR (Arabidopsis)
Match: AT2G29490.1 (glutathione S-transferase TAU 1) HSP 1 Score: 174.5 bits (441), Expect = 6.800e-44 Identity = 87/205 (42.44%), Postives = 130/205 (63.41%), Query Frame = 1
BLAST of Spo16930.1 vs. TAIR (Arabidopsis)
Match: AT2G29460.1 (glutathione S-transferase tau 4) HSP 1 Score: 171.0 bits (432), Expect = 7.600e-43 Identity = 85/205 (41.46%), Postives = 128/205 (62.44%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16930.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16930.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16930.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo16930.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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