Spo16935 (gene)

Overview
NameSpo16935
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRibosomal protein L29
Locationchr6 : 22580707 .. 22589764 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATATTTACTAAAATGCCATTTGATTGAATTTAGTGGGAATTTCTCCGATTTAATACTCCATCTCACATTCTCACTCATTCACCAGTAACACTCCTACTCTCACAAGCCGCTATCACCACCGCCGTCCGCCGGTACGCACCTTTCTCTCCCCTCTCCCTACAGCAAGCTTCAATTTGTCGTTTTCTTTCATTTTCTTTAACTTTTTCAATTCAAAAACCTACTGAAATTGTTGCATTGAAATTTTGTGATTAGGGTTTAACATTCAAAAAATGTTTCTACGAAGAATTTGTGGACGAATTTTATCGGCAGCTGCAAAATCAGAACACCCAAATGCTGGAGGAACAGCTGCTTCGTCATCAGTGTATAACCCTCTTGAGCAATTCTTTGAGGTTGATAGATCAGCTGATGATGATAAACGTGTTGTTTATGGTGCGTTTATTTTCACCCCTTTTTCTTGTGTTGTCAATTTAATTTATTTTTGATTAATATATGATTAGGGAAACAATTTTCTGACGACCCTTTGATTAATGGAAAATATGGGTTCTTGTAATAGAGAAATGGGTTCTGTGATAAAAGGTTTCTTTTGGTATGAACAATAATATTGACATTGGTAATTTTGCAGTTGAATTTGGAAAATTATGTATTAGTTTGTACTACATAGTTGATTATTGTTTGTACAAAATACTAAATGGGTTCTGATATACTGTATGGAAGATTGAAATTGTGTGGTTATGTGATCATTGGTTTTGTGTTTTGTGTGCTGCCGTGCTGGTATGTATGTGTTCCTCAAGACCGGCTCCGGCAATCCGGAGGCCCTGTGCTAAACACTAGAATGAGGCCCTTATAAAAAAAAATGTAAAATTCATTTCTGTATATTATGAATTTTCTGTACCTAATGTAATTTTTTCTTTCACATCTTGAAAAACCTTTGCAATTATATAAAAATAGATGAATACAAACTTTTCTATAAGGCGGTCTTACACAAAAGACCACCTTGGTATCATATAAGTTAAGCAATGAAACCAATTAGTTAAGCACTGGAACCAATTAGTTAAGCACTGAAACCAATTAGTTAAGCAAAGAAATTAATTAGTTAAGCAATTGAATCAATTAATTAAGCAATGTAACCAATTAGTTAAGAAATGGAACCAATTAGTTAAGCAACCAAAGTGGTCTTTCCGGTAAGGCGGTCTTACACAAAAGTTGCCGATAGATGAATTGAGTTATTATACAAATCGTTACGGTAAAATTGAAGAATTTAATTAAGAGCTTCCCGTAGCAATTTTCCCCCTTTTCAATGCATCAAATTGAAATTGCAGGATGCAGAAAATTGTGGATGTTTAGAGATAATTGTGATAATCAACTAGTGTTAAAAGGTTTGAATATTTGATAGGCATGAAAATTGAGGGATTCTTGCTTCACTTTCTCGGCAAAAACAGAGGAAAGCAATTTAGTCAAGAAAATAAATTGATTGGAGGATTTCTAGGAGAGTAATAATTTTCATAATTAAAACTTCTATTGGAAAATAAAATCTTTGAAAAGAGAAGAGAGAATTTGAGGAGTTTGGTTTATTGATAAGCTTGATTTCACGCAACTGACTGAAACGAAGAAGAGACAAAGCTTCATTTTATTTTTGGCCTGCGAATCGTTTTAGGCCCAAAATTTTGGAGGCCCTGTTCCACGGCTCCGACTAGACCGCCCAATAGCCAGGCCTGGTGTTCCTGATATGGATTCCTGGCAACACTTAGCTCCAATTGTTTTGGTGGGTGAAAATGCGTCTTGTTCTTGTCTTTTTCAGGTGGTGGGGAGTGGGTTTATCGAACTTATACTATTGTGGTTGAAATGTAGTTTTTTTTTGGGTGAAATTACATTATGGATGAGAACGTGTATTTCATACGGCTGTTATTAGAGGAGAGTTTTGTCTCAGGATTTTCATTTAAGAAAATGTAGAACAATTTTATTCCCCGGGTTGATAGAAGTGATACAACTGCCCAAACTATGCTACAAGTGCGCTTGGGAGCCTGGGACTGGTGGCCATTATGGATGTTTGGCACTTTCTTAGTTTTGGACTTTGTTGCATGATTTCCAAGGTCGCCAAGTACAAGTGCGCTTGAGAGCCTGGGACTGGTGGCAGTAGTTGGGCTACATGGCTGACAGTTGGGCAGCATGGGCCAGAATTGGTACTCAATGTTAGCTTAATCAAACCAGTAGTGTCCTGACTTCCCTCTTTCTTGTACCTAATGTTGGCAATTGAAACCTGTTGGGGGGGGAGGGGGGACTTGACTCCTTGAGTGATGGTGTCGCCTCAATGTTTCTCTAGATTGATTTTCCTTGCTTATCCTCGTGGTACTGTTCGAACTTTGTCCGTAGTGATTTGTAGGAACTAGGAAGTTCTTCTCAACTCTGTTTTGCTACTCTTGTATTTGTGATAAAACAAGGCTACTTTTATGATATCTGACTGAGGTGAATCATGTATTGATAATATATTTTAGGACGTGGTTGGAAAGCTTCTGAATTGCGCCTCAAGTCTTGGGATGATCTCCATAAGCTGTGGTATGTACTTATGAAGGAGAAAAATATGTTAATGACACAGAAACAGATGCTCAATGCTCAAAACCTGCGATTCCCTAATCCAGAACGTATATCAAAGGTAAGTATGGTGATTTAAACTCTTCACGTGATGTTAAGTTTAAGGTGACTTCCCAGTTTAAGCAAAGAAGTGCTCTTTTATAATATGTGACATTATTAGTTTGGAACGATTGGAAACAAAGAATATGCATCTGGGGTCTTTCCATGAACATGTGTTTAGCAGTCTTTTTCTGATGAGTGATTGTGGTATTATGTCCTATATATGCTAAGAATAACGAAGAATGAAAATTCATGATCACTTCCATAGTTTTGATTAAATGGAATCATTGTTCGGTACCAACTGTTTTTGGATTTGGTAGGTCCTGGTTGTTGTTTAAGCGGTTGTTAATGCAACCACAATTACAACCTAGTATTGATCCTCTGGGTGGATGTCAGAGCTTATGAGAGGTCAAATATGTGGTCTTACCCCTAAATAGTCTTGTACTGTAGGGAGACTATCTCTAACAGATTTAAGTAGCATTAAATGTTAAAATAACCCTGTAAGATATCGGCATTTCAAAACATCATTGTTTAACCACTTTAATGTATTGGGAAGTTCTGCATGGTGTCATCATGTTTTAGGCTTTGTCCATGGTTGAATTGTAATGTAACTTTTTCTTTAAAATTTGCATAGCGTCATTAAGGTACCATCATATATGTGATAGGGAAAAGTCGGTCGATTACTAGTCTTCCCTAAATCAAACAAAAACCTAAAATTAATCACTAAAACGAGTAAAATGATAAGCAAGGGTCGAAATCCACAAAGACAACGTACAATAGTTTGTATTAATTACACGATAAGCTAGGTCGAAGAGAGGTTGGAAAAGACACTAAAAACTAAGGACTTCTATACTAAACTAACTACCAAAGGTAAACGAGATTAGGAATGGGTCAAACAACAAACAAATCATGGATTAAGCATAAGCGGATTGAAAATAGGGGATGAAACACAAACACTACATGGATAAACGTTGAATTCATAATAGCTCCAACCACCTCCTTGCGTGCAAGCAGTTTCTCTAAGCACAAGCGTGAACTCTCGTTCTACACTATCATACCCTGACTCCTTGAGTAAATCAATGTCGAAATTCAACCAAATAATCAATGCTAGGTCTTTAATACCTTTCCAACCCAACTAGACCACCCCACGAAATCATGCAACATTTAATTGATCAAGTCAAATGCAACATTTATTGGAAATGCTTAAACATGCAAAAACCATAAAATCCAATCACAAGTACCCAAACTAATCAATGTTGAGTTTTCACCCAAACCCTGACCTTTACTACTCCGTAATCATAAAAACAAGAAATTTAAACAAATTAACAACTAAAAGCAACCAATTGCCTGTTGGTTCAATGGTGATTGAGGCTGAACTTTGTTGGGAGGACTGCGTGTTCGATCCCCGCAACAACAATTGGGAGGGGACTGGAACCTATCCACCCAGAACTCGCCTCGAATCCGGATAAGCCCTAAGGGTGAACCGGCGGTAACACCAAAAAAAAAAAAACTAAAAGCATGGTATTAAACATTAATCTAAGCAAACAAAACATGAACATTTAAACTAAGTAAAACAATTGAAACAAGCAAAATAAGTAGAACTAAGCTATAAATGAGACAAGAGAGTAATAATTTTTTATTGGGTGAAGCAAATTCAAATCTCTAGATTGCTTCTTCAATCATCCAAAATCCAAGCTTTCCTTTAATTTTTCTCACTTTTTCTTTTTAAACTAAACTATTGAGGAACCCTAAAATTTACCCTAATTATGTACATTCTTTTGTTTAAAACCATGGTATAAAAACTCGTATGAGTTCATTCGTATCGCCTGAGTTAACTAGGGTGATAGACGATACGATCTATCCCGGTTTGTCAAGGTGTTTTTAAAAAACGCCGAGCTCTGGACCTGCTCAACCGATCCAAACCAATTTTGTCCGCATTAAACGTTATAGCCTCACATCTACTCAATTTTCAGCTGAATTCCCCATGTTTTCGACAAAAAGAAAGGGAAAAACGAAATAAATGGAGAAACTCCATTGAAATAGAGTAGAACTCCATTTTTCAGATCTGAAACAAGAGAGGAGAGAGAAGGTGGACAAAGGAATTCATTCAATTATGTCACGTGTACGGTTTAGGGGGGGGGGGACTAGGGTGGATGGTGAGTGGGGTTGGCATGGGGCTTCTTTTTCAAATTTCAAATTCCTACCGCGACACGTTCCGCGACTAACACATCATTTCCGTTACTGAGACACCGCGACTGATCCTGCACCAATACTACATTTTCGATCTATGTTCAAAAACCAAAAGTGGCTTTTATACTTACAAGTCTAAAGGGAAAATAAAACGAAGAAATAAAAAAAAACAAAAGGGATTAAAAGAAAGAAAAAAGAGGAAATGAAATAAAATCCCACCAAAACAAGTTAGACTCTTCAACCTTCTTCTTCGCTGCTTTTGCTTGTCTTCTTCCTCCTTCAAATCACAGCCCTTCGAATTCAAATCATGGCATCATCAAGAAATCACGGCCACACGATGAATTTTTAATCAAGTCCCACCATCTTTCTTTTGAATCGTGGCCGTGTAATTCAATAAGCTCCATTAAAGTCGTGGCCCTTCCATTCGAGTTGTACGGCGTCAACCCGAGAACAAGACCACCGCAAGACAACGCAGCCACGTGACCTTCATTAACTCTGTACAACTCCATCGACACGAACGCGCTAGTGTTTGTTGGAGTGGTCGCGCAAATGCTATTGTAAATCCAATTTTGTATAACTCGTCTCGCGGGGACGCAGGATTTCATGCAAGAGCGGACATGCCTCCTCAAGGTTGTTGGGATTGGCGTTGTTGTTATTGATGTGCAAAGTAGGAGAAGAGGCGAGGGCTCAGCGTGTTGTTGTTGTTGGCACGGCGGGTGCTGCAGTGCTGCAATTTTGGTGTTTAGGCGGGCAGCGAGGAGATTGGTGAGAAGGTGAGAGGTGGAGTAGTATATGAGGGAGCTGAAGTTATGGGGATAGTGCGCTGATGATGGTGTTGGGCGTTGCTTGCTGGCTGGGAGAGAGAGTGGTGAATCGGAGGTGGAGGATGGAAGATGGGCTGTAGGCAAGGAGATGAAGGTGGAGAGTTGAGATGGTTGGGTGTTGTTGGTGTGGTGTCGGTAGTCAAGTAGTGGTGTAAGATAAGGGTGCGTTCTTTTGTTTTGCCTAAGTTTGTCATCAATAGGCACTTGAAACTTGTACTCCGACCCGAACAACACGCACTTACACAAATAAAAACAAAGACTAGGGGAGAAACTAACATATAAAAATGAAACAAAGATAAATAAAAAATAATAATATAATAAATAGAAATGGAAACAAATTATGAAAACTAAACTATAAAAGTACTAAACCAAAGAAAGTCAAGACCTAAAATCTAATAAAAACCACTAATCACACTAAACTAAGCTAGAAATAATAAAAGAAGAAATAACTATTAAAATGGATGGACAGATAAAAATATAGGGAAAATAACCTAGAAAAATACCTAAAAACTGCCCTAGAAGTGACATAAATGTCACTATCAATATGCCGTGCTCTCCACTATCATATCTGTTAAGTATCTAATTACCATCATATCTGTCGTGCTCTTCCTTTGTCACATTGTCGTAGTGTCAAAATCGATGGTGTCTTTTAGTGCGAATGGTAACTTTGCTTAACTAGATGCTGAGGAAAAATAAGATGTTTCATTATAGTGTTTGATAGATTTCCAGTTATGTAGAATCTTTCTAGTGGTTATGGTGGAAGGTCAGCTGCATAGACAGTTGTAATGAGTTTTGTACATCTGAGAATAGGCATCATCCAGTACTCTGGGGGCCATAGAAGAAAGGTTTGAATTGGGGAAAATTGGGTTTGTGCATGAATGAATGAGCTCTAAGAATATGTATGGCTCACTCTTTGATGCCATTGAAGGAAAATGTTAATAAGGGACCGGGCATAAGTCAGTTAGTGGCAAGCTGCAGATTTGATTTTTATCATCCAACAGTAATCCAAGGTTCTAATATTCTTATTTTTTATCCCTTCAAGAAAAATGTGAGAATGCTAAAATCCATTCTTTACATTGAATTCAACAACTCAGATTATATACATTTAGACTACAACACCTCAAATGGATTGGCATAGAATGTTACCATGTACTATCACTAACTTTAGGTTGTTTATTGCTTTGCAACATTCTGCAATTTCTGAAATTTTTTGGTTGCAAATTTAAATGTGACAATTTTCTATAGCTTCGTACATGGTTATTTTCTCCTGTAACTTTACTTAAATACCATGTCTAGAATTATAGTGGTTGCCTCCTTCCCATCATCTTTCCACCACCCCATAGAAACAGGGCATGTTAGGAAATCTTACCATAATTTTTTTTTTTTTTTTTGACGGGTAAGGGAAAATTTCATTAAAATAAAGCCATACGTCATCTACAATCAAATTTTTCCCTAAACAAGAACAAGAACAAATCTAAAAATACAATAACAAATTCTTTTTTCCAAATACCTAAATGAGCAAATACTGAAGAACGGCTCCGAAATCATGGTATATGTGTAGCCATGAAATAACTTCGATGTCAAATCATCTTTTCGTTGTATGGAGGACCTCGTTATAAACGTTATAGTCATCTTGAAAATTGAATCTGCTTCATATCCCGGATTGATCTTGATCTTCAAAGTGCATACATCATAGAGACAACACAATTTCCACCATGAAATACACAAACAACACCCCTCGACTCGACACCCACACAAAAGCAGAAAACCTTTCGAAAAGAAAGGAGAAAAAACCCTGTCTTTCAAGGGAGAATCGTTCCTCTCGGGAAGAGGACGCATTATTCGACCTACAAAAACAAAAACTAAAGGAAAGAACACAAGAAAATAAAGTAATTGGGGCTTTCCACCGATAAAAACCGATGGAAGCCCCTCAAAAATTACCAATGGAGGCTAGGGTTTGGAGGAGAGGGAGGAGAGCCGTGGAGAGGAAAAATTTGTCACTCATACTCCTACCATAATCTATTTCAATTCAAGGAAATGTGACAATTTTAGTTGCCATCTCAGGAATTTCGCAATCACTCTCCCTTATCAAAGTCATTCAACTTGTGCTCCATGAATAAGTGTCCCCTAAGATTTTGCTTTGCAAGACTTCAACATGTGATATGAGAAAGCCTAATCTTGTCAGAATCCATTGCTTCGCTCCTGTCTGTATTGTTATCTGAGATTTAAAATCTTTATCTGGACTTTTTTCTACAACATCTTATGGTCTATCCTTTTCACTATAGTGATTTTACTTTCAACATGTCCTTATATGATGTTCTAGTGTCTGTTTGTGGAATTTTCATTTTCCTTTTCTTGTAGGACTTTATTTTAACATGTTTTTTCCCACATGATTGCAACCTTCTTGTGATTGATGATTTAACCTGACCCCCTATGCGAATGCAGGTGAGAAGATCCATGTGCCGGATCAAGCATGTGCTTACAGAGAGGGCCATCGAGGATCCAGATGCCCGCAGATCTGCTGAGATGAAAAGGATGATAAATTCTCTTTAATATGTTCTGGTGGTTCTAAGACCAAAAAAAAAAGACAATGAAGTAATTTTTATTTTGGCCACTGATTAGAGTTTTGGAGTTGATCAATGAATGGCATTTTCGATTTCCTCCCCTATATTTCCATGGTTTTTTTCAATAATTAAATTAGGAGGGTTCTATTCTATCAGGGTGTCCATGCTGTAATTTGCATTCATGTGCATGTGCTCTGCACATGAGCACGTATCAGATGTAGCATGTAAATTTTGGGGTAAGAGGAATGGCTGGTATTACAGTTGTCTCTTTTAAGTTTCTCTTGGTGACTGATTTGCCATTTTGTATGTTGTATGAATCTTTGTTGTCGATGATCAGCATTTGGTCACTGATATAGTGATATGCATCTACATAGAGGAAACTACAGTATGCTCTTGCTATGGGTACGCCAAAATCAGTTTTTGGTTTGCCTAGATCATTTCCCGTACATGCATTCTAGTTAGTACCTCCCGGATTAAGATTAGCTGTCATATTGATGTAGATGAATGTATAGTATCCACGTGACAACTAATTCCGGACATAGGGATTAGCTGTCATATTGAGCCATTGAGGTAGATGAATGTACAATATTCACGTGACAACTAATTCCGGACAGAGGAAGTGAGGGAGTAACCGACATATAGATTCATTCCCGTGTGTGAAGACTGAAACAGTAGTCAGTACATAGATGATAGATCTAAGTCGAGAATAAGACATTTGGAGCAACTAGATGCACATGTGACTTTCGGGGTACGTGTAACATGTAATTACATGTACGGATGCATTATTTTTTTCAGTGTATGACTCCTCTGCATGTGTGGATGTATCTCTACACTTGTTTCAAGTTTCA

mRNA sequence

CAAAATATTTACTAAAATGCCATTTGATTGAATTTAGTGGGAATTTCTCCGATTTAATACTCCATCTCACATTCTCACTCATTCACCAGTAACACTCCTACTCTCACAAGCCGCTATCACCACCGCCGTCCGCCGGGTTTAACATTCAAAAAATGTTTCTACGAAGAATTTGTGGACGAATTTTATCGGCAGCTGCAAAATCAGAACACCCAAATGCTGGAGGAACAGCTGCTTCGTCATCAGTGTATAACCCTCTTGAGCAATTCTTTGAGGTTGATAGATCAGCTGATGATGATAAACGTGTTGTTTATGGACGTGGTTGGAAAGCTTCTGAATTGCGCCTCAAGTCTTGGGATGATCTCCATAAGCTGTGGTATGTACTTATGAAGGAGAAAAATATGTTAATGACACAGAAACAGATGCTCAATGCTCAAAACCTGCGATTCCCTAATCCAGAACGTATATCAAAGGTGAGAAGATCCATGTGCCGGATCAAGCATGTGCTTACAGAGAGGGCCATCGAGGATCCAGATGCCCGCAGATCTGCTGAGATGAAAAGGATGATAAATTCTCTTTAATATGTTCTGGTGGTTCTAAGACCAAAAAAAAAAGACAATGAAGTAATTTTTATTTTGGCCACTGATTAGAGTTTTGGAGTTGATCAATGAATGGCATTTTCGATTTCCTCCCCTATATTTCCATGGTTTTTTTCAATAATTAAATTAGGAGGGTTCTATTCTATCAGGGTGTCCATGCTGTAATTTGCATTCATGTGCATGTGCTCTGCACATGAGCACGTATCAGATGTAGCATGTAAATTTTGGGGTAAGAGGAATGGCTGGTATTACAGTTGTCTCTTTTAAGTTTCTCTTGGTGACTGATTTGCCATTTTGTATGTTGTATGAATCTTTGTTGTCGATGATCAGCATTTGGTCACTGATATAGTGATATGCATCTACATAGAGGAAACTACAGTATGCTCTTGCTATGGGTACGCCAAAATCAGTTTTTGGTTTGCCTAGATCATTTCCCGTACATGCATTCTAGTTAGTACCTCCCGGATTAAGATTAGCTGTCATATTGATGTAGATGAATGTATAGTATCCACGTGACAACTAATTCCGGACATAGGGATTAGCTGTCATATTGAGCCATTGAGGTAGATGAATGTACAATATTCACGTGACAACTAATTCCGGACAGAGGAAGTGAGGGAGTAACCGACATATAGATTCATTCCCGTGTGTGAAGACTGAAACAGTAGTCAGTACATAGATGATAGATCTAAGTCGAGAATAAGACATTTGGAGCAACTAGATGCACATGTGACTTTCGGGGTACGTGTAACATGTAATTACATGTACGGATGCATTATTTTTTTCAGTGTATGACTCCTCTGCATGTGTGGATGTATCTCTACACTTGTTTCAAGTTTCA

Coding sequence (CDS)

ATGTTTCTACGAAGAATTTGTGGACGAATTTTATCGGCAGCTGCAAAATCAGAACACCCAAATGCTGGAGGAACAGCTGCTTCGTCATCAGTGTATAACCCTCTTGAGCAATTCTTTGAGGTTGATAGATCAGCTGATGATGATAAACGTGTTGTTTATGGACGTGGTTGGAAAGCTTCTGAATTGCGCCTCAAGTCTTGGGATGATCTCCATAAGCTGTGGTATGTACTTATGAAGGAGAAAAATATGTTAATGACACAGAAACAGATGCTCAATGCTCAAAACCTGCGATTCCCTAATCCAGAACGTATATCAAAGGTGAGAAGATCCATGTGCCGGATCAAGCATGTGCTTACAGAGAGGGCCATCGAGGATCCAGATGCCCGCAGATCTGCTGAGATGAAAAGGATGATAAATTCTCTTTAA

Protein sequence

MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKASELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTERAIEDPDARRSAEMKRMINSL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16935.1Spo16935.1mRNA


Homology
[Close]
BLAST of Spo16935.1 vs. NCBI nr
Match: gi|902205481|gb|KNA15173.1| (hypothetical protein SOVF_100280 [Spinacia oleracea])

HSP 1 Score: 282.3 bits (721), Expect = 4.500e-73
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60
           MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS
Sbjct: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60

Query: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120
           ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE
Sbjct: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120

Query: 121 RAIEDPDARRSAEMKRMINSL 142
           RAIEDPDARRSAEMKRMINSL
Sbjct: 121 RAIEDPDARRSAEMKRMINSL 141
[Close]
BLAST of Spo16935.1 vs. NCBI nr
Match: gi|731347095|ref|XP_010684805.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 247.3 bits (630), Expect = 1.600e-62
Identity = 125/141 (88.65%), Postives = 132/141 (93.62%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60
           MFLRRICGRILSAA  SEH +A   AAS SV NPLEQFFEVDR+ADD+KRVVYGRGWKAS
Sbjct: 1   MFLRRICGRILSAAVASEHSSASA-AASISVRNPLEQFFEVDRAADDEKRVVYGRGWKAS 60

Query: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120
           ELRLKSWDDLHKLWYVL+KEKNMLMTQ+QMLNAQNLRFPNPERISKVRRSMCRIKHVLTE
Sbjct: 61  ELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120

Query: 121 RAIEDPDARRSAEMKRMINSL 142
           RAI++PDARRSAEMKRMIN L
Sbjct: 121 RAIDEPDARRSAEMKRMINGL 140
[Close]
BLAST of Spo16935.1 vs. NCBI nr
Match: gi|225457110|ref|XP_002283452.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial [Vitis vinifera])

HSP 1 Score: 225.7 bits (574), Expect = 5.000e-56
Identity = 111/141 (78.72%), Postives = 125/141 (88.65%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60
           MF+RR+ GR L AAAKSE P+A G A + + YNPLE+FFE DRS D+DK VVYGRGWKAS
Sbjct: 1   MFVRRVFGRALLAAAKSE-PSAAGAATARAGYNPLEEFFEADRSPDEDKPVVYGRGWKAS 60

Query: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120
           ELRLKSWDDLHKLWY+L+KEKNMLMTQ+QML +QNLRFPNPERI KVR+SMCRIKHVLTE
Sbjct: 61  ELRLKSWDDLHKLWYILLKEKNMLMTQRQMLQSQNLRFPNPERIPKVRKSMCRIKHVLTE 120

Query: 121 RAIEDPDARRSAEMKRMINSL 142
           RAIE+PD RRS EMKRMIN+L
Sbjct: 121 RAIEEPDPRRSVEMKRMINAL 140
[Close]
BLAST of Spo16935.1 vs. NCBI nr
Match: gi|743888392|ref|XP_010910605.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Elaeis guineensis])

HSP 1 Score: 220.3 bits (560), Expect = 2.100e-54
Identity = 109/141 (77.30%), Postives = 124/141 (87.94%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60
           MF+ RI GR+L AAAKSE   A  +A++  ++NPLE+FFEVDR  DD+K VVYGR WKAS
Sbjct: 1   MFVSRIFGRVLYAAAKSESSAAAASASAKKLHNPLEEFFEVDRRTDDEKPVVYGRSWKAS 60

Query: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120
           ELRLKSWDDL+KLWYVL+KEKNMLMTQ+QML+AQNLRFPNPERISKVR+SMCRIKHVLTE
Sbjct: 61  ELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLHAQNLRFPNPERISKVRKSMCRIKHVLTE 120

Query: 121 RAIEDPDARRSAEMKRMINSL 142
           RAI +PD RRSAEMKRMIN L
Sbjct: 121 RAIAEPDLRRSAEMKRMINIL 141
[Close]
BLAST of Spo16935.1 vs. NCBI nr
Match: gi|1009131061|ref|XP_015882637.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 220.3 bits (560), Expect = 2.100e-54
Identity = 112/143 (78.32%), Postives = 124/143 (86.71%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSS--VYNPLEQFFEVDRSADDDKRVVYGRGWK 60
           MF+ R  GR L AAAKSE   A   A+SSS  VYNPLE+FFE DRS D++K +VYGR WK
Sbjct: 1   MFISRYLGRTLLAAAKSETSAAAAAASSSSRTVYNPLEEFFEADRSPDEEKPIVYGRSWK 60

Query: 61  ASELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVL 120
           ASELRLKSWDDL+KLWYVL+KEKNMLMTQ+QML+AQNLRFPNPERI KVR+SMCRIKHVL
Sbjct: 61  ASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLHAQNLRFPNPERIPKVRKSMCRIKHVL 120

Query: 121 TERAIEDPDARRSAEMKRMINSL 142
           TERAIEDPD RRSAEMKRMIN+L
Sbjct: 121 TERAIEDPDPRRSAEMKRMINAL 143
[Close]
BLAST of Spo16935.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6P2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_100280 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.200e-73
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60
           MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS
Sbjct: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60

Query: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120
           ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE
Sbjct: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120

Query: 121 RAIEDPDARRSAEMKRMINSL 142
           RAIEDPDARRSAEMKRMINSL
Sbjct: 121 RAIEDPDARRSAEMKRMINSL 141
[Close]
BLAST of Spo16935.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BW31_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g166340 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.100e-62
Identity = 125/141 (88.65%), Postives = 132/141 (93.62%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60
           MFLRRICGRILSAA  SEH +A   AAS SV NPLEQFFEVDR+ADD+KRVVYGRGWKAS
Sbjct: 1   MFLRRICGRILSAAVASEHSSASA-AASISVRNPLEQFFEVDRAADDEKRVVYGRGWKAS 60

Query: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120
           ELRLKSWDDLHKLWYVL+KEKNMLMTQ+QMLNAQNLRFPNPERISKVRRSMCRIKHVLTE
Sbjct: 61  ELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120

Query: 121 RAIEDPDARRSAEMKRMINSL 142
           RAI++PDARRSAEMKRMIN L
Sbjct: 121 RAIDEPDARRSAEMKRMINGL 140
[Close]
BLAST of Spo16935.1 vs. UniProtKB/TrEMBL
Match: D7SHW3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07870 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.500e-56
Identity = 111/141 (78.72%), Postives = 125/141 (88.65%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60
           MF+RR+ GR L AAAKSE P+A G A + + YNPLE+FFE DRS D+DK VVYGRGWKAS
Sbjct: 1   MFVRRVFGRALLAAAKSE-PSAAGAATARAGYNPLEEFFEADRSPDEDKPVVYGRGWKAS 60

Query: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120
           ELRLKSWDDLHKLWY+L+KEKNMLMTQ+QML +QNLRFPNPERI KVR+SMCRIKHVLTE
Sbjct: 61  ELRLKSWDDLHKLWYILLKEKNMLMTQRQMLQSQNLRFPNPERIPKVRKSMCRIKHVLTE 120

Query: 121 RAIEDPDARRSAEMKRMINSL 142
           RAIE+PD RRS EMKRMIN+L
Sbjct: 121 RAIEEPDPRRSVEMKRMINAL 140
[Close]
BLAST of Spo16935.1 vs. UniProtKB/TrEMBL
Match: A0A164XJ92_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_016496 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.300e-54
Identity = 110/142 (77.46%), Postives = 122/142 (85.92%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSV-YNPLEQFFEVDRSADDDKRVVYGRGWKA 60
           MFL RI GR L  AAKSE   A   A +S + +NPLE+FFE DRS D+DK VVYGR WKA
Sbjct: 1   MFLTRIFGRALCTAAKSESSAAAAAAYTSRMGHNPLEEFFETDRSPDEDKPVVYGRSWKA 60

Query: 61  SELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLT 120
           SELRLKSWDDLHKLWYVL+KEKNMLMTQ+QMLN+QNLRFPNPERI KVR+SMCRIKHVLT
Sbjct: 61  SELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNSQNLRFPNPERIPKVRKSMCRIKHVLT 120

Query: 121 ERAIEDPDARRSAEMKRMINSL 142
           ERAIEDPD RRS+EMKR+IN+L
Sbjct: 121 ERAIEDPDPRRSSEMKRLINAL 142
[Close]
BLAST of Spo16935.1 vs. UniProtKB/TrEMBL
Match: A0A161XEC3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021562 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 9.500e-54
Identity = 106/141 (75.18%), Postives = 120/141 (85.11%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVYNPLEQFFEVDRSADDDKRVVYGRGWKAS 60
           MFL R+ GR L  AAKSE   A   + +   +NPLE+FFE DRS D+DK +VYGR WKAS
Sbjct: 1   MFLTRVFGRALCTAAKSESSAAAAASMARMGHNPLEEFFETDRSPDEDKPIVYGRSWKAS 60

Query: 61  ELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHVLTE 120
           ELRLKSWDDLHKLWYVL+KEKNMLMTQ+QMLN+QNLRFPNPERI KVR+SMCRIKHVLTE
Sbjct: 61  ELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNSQNLRFPNPERIPKVRKSMCRIKHVLTE 120

Query: 121 RAIEDPDARRSAEMKRMINSL 142
           RAIEDPD RRS+EMKR+IN+L
Sbjct: 121 RAIEDPDPRRSSEMKRLINAL 141
[Close]
BLAST of Spo16935.1 vs. ExPASy Swiss-Prot
Match: RM47_MOUSE (39S ribosomal protein L47, mitochondrial OS=Mus musculus GN=Mrpl47 PE=1 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.100e-13
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 1 

		  

Query: 35  LEQFFEVDRSADDDKRVVYGRGWKASELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQ 94
           LE+FF+  ++  ++K V  G  W   +LR KS +DLHKLWYVL+KE+NML+T +Q    Q
Sbjct: 66  LEEFFDDPKNWGEEK-VKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQ 125

Query: 95  NLRFPNPERISKVRRSMCRIKHVLTER 122
            L  P+PER+ KV  SM  +  V+ ER
Sbjct: 126 RLPMPSPERLEKVVDSMDNVDKVVQER 151
[Close]
BLAST of Spo16935.1 vs. ExPASy Swiss-Prot
Match: RM47_BOVIN (39S ribosomal protein L47, mitochondrial OS=Bos taurus GN=MRPL47 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.800e-13
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 1 

		  

Query: 35  LEQFFEVDRSADDDKRVVYGRGWKASELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQ 94
           LE+FF+  ++  ++K V  G  W   +LR KS +DLHKLWYVL+KE+NML+T +Q    Q
Sbjct: 66  LEEFFDDPKNWGEEK-VKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQ 125

Query: 95  NLRFPNPERISKVRRSMCRIKHVLTER 122
            L  P+PER+ KV  SM  +  V+ ER
Sbjct: 126 RLPMPSPERLEKVVDSMDALDKVVQER 151
[Close]
BLAST of Spo16935.1 vs. ExPASy Swiss-Prot
Match: RM47_HUMAN (39S ribosomal protein L47, mitochondrial OS=Homo sapiens GN=MRPL47 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 3.100e-13
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 1 

		  

Query: 35  LEQFFEVDRSADDDKRVVYGRGWKASELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQ 94
           LE+FF+  ++   +K V  G  W   +LR KS +DLHKLWYVL+KE+NML+T +Q    Q
Sbjct: 64  LEEFFDDPKNWGQEK-VKSGAAWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQ 123

Query: 95  NLRFPNPERISKVRRSMCRIKHVLTER 122
            L  P+PER+ KV  SM  +  V+ ER
Sbjct: 124 RLPMPSPERLDKVVDSMDALDKVVQER 149
[Close]
BLAST of Spo16935.1 vs. ExPASy Swiss-Prot
Match: RM04_CHAGB (54S ribosomal protein L4, mitochondrial OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=MRPL4 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.900e-12
Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 1 

		  

Query: 53  YGRGWKASELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNP---ERISKVRR 112
           +GR W A ELR KSWDDLH+LW+V  KE+N + T     N   L F      ER + VR+
Sbjct: 119 HGRSWTAEELRHKSWDDLHRLWWVCAKERNRIATANWERNKSGLGFGEAEMRERDNAVRQ 178

Query: 113 SMCRIKHVLTERAIEDPDARRSAE 134
           +M  IKHVLTER     DA + AE
Sbjct: 179 TMRSIKHVLTERFYTWEDAVKVAE 202
[Close]
BLAST of Spo16935.1 vs. ExPASy Swiss-Prot
Match: RM04_NEUCR (54S ribosomal protein L4, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mrpl-4 PE=3 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.400e-10
Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 1 

		  

Query: 53  YGRGWKASELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRF---PNPERISKVRR 112
           +GR W  SELR KSWDDLH+LW+V +KE+N + T         L F      ER   V++
Sbjct: 122 HGRAWTVSELRKKSWDDLHRLWWVCVKERNRIATANWERTKSELGFGLAEANERDRNVKQ 181

Query: 113 SMCRIKHVLTERAIEDPDARRSAE 134
           +M  IKHVLTER     DA + AE
Sbjct: 182 TMRGIKHVLTERFYAWEDAVKLAE 205
[Close]
BLAST of Spo16935.1 vs. TAIR (Arabidopsis)
Match: AT1G07830.1 (ribosomal protein L29 family protein)

HSP 1 Score: 207.6 bits (527), Expect = 5.000e-54
Identity = 104/144 (72.22%), Postives = 119/144 (82.64%), Query Frame = 1 

		  

Query: 1   MFLRRICGRILSAAAKSEHPNAGGTAASSSVY---NPLEQFFEVDRSADDDKRVVYGRGW 60
           MFL R  GR   AAA +   +    AA+S++    NPLE+FFE DRS D+DK VVYGRGW
Sbjct: 1   MFLTRFVGRRFLAAASARSESTTAAAAASTIRTPTNPLEEFFEFDRSQDEDKPVVYGRGW 60

Query: 61  KASELRLKSWDDLHKLWYVLMKEKNMLMTQKQMLNAQNLRFPNPERISKVRRSMCRIKHV 120
           KASELRLKSWDDL KLWYVL+KEKNMLMTQ+QML AQN++FPNPERI KVRRSMCRIKHV
Sbjct: 61  KASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLQAQNMQFPNPERIPKVRRSMCRIKHV 120

Query: 121 LTERAIEDPDARRSAEMKRMINSL 142
           LTERAIE+PD+RRSAEMKRM+N +
Sbjct: 121 LTERAIEEPDSRRSAEMKRMVNGM 144
The following BLAST results are available for this feature:
BLAST of Spo16935.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902205481|gb|KNA15173.1|4.5e-73100.hypothetical protein SOVF_1002... [more]
gi|731347095|ref|XP_010684805.1|1.6e-6288.6PREDICTED: 39S ribosomal prote... [more]
gi|225457110|ref|XP_002283452.1|5.0e-5678.7PREDICTED: 39S ribosomal prote... [more]
gi|743888392|ref|XP_010910605.1|2.1e-5477.3PREDICTED: 39S ribosomal prote... [more]
gi|1009131061|ref|XP_015882637.1|2.1e-5478.3PREDICTED: 39S ribosomal prote... [more]
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BLAST of Spo16935.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R6P2_SPIOL3.2e-73100.Uncharacterized protein OS=Spi... [more]
A0A0J8BW31_BETVU1.1e-6288.6Uncharacterized protein OS=Bet... [more]
D7SHW3_VITVI3.5e-5678.7Putative uncharacterized prote... [more]
A0A164XJ92_DAUCA7.3e-5477.4Uncharacterized protein OS=Dau... [more]
A0A161XEC3_DAUCA9.5e-5475.1Uncharacterized protein OS=Dau... [more]
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BLAST of Spo16935.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RM47_MOUSE1.1e-1347.139S ribosomal protein L47, mit... [more]
RM47_BOVIN1.8e-1347.139S ribosomal protein L47, mit... [more]
RM47_HUMAN3.1e-1347.139S ribosomal protein L47, mit... [more]
RM04_CHAGB9.9e-1248.854S ribosomal protein L4, mito... [more]
RM04_NEUCR1.4e-1046.454S ribosomal protein L4, mito... [more]
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BLAST of Spo16935.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G07830.15.0e-5472.2ribosomal protein L29 family p... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001854Ribosomal protein L29GENE3D1.10.287.310coord: 57..124
score: 1.
IPR001854Ribosomal protein L29TIGRFAMsTIGR00012TIGR00012coord: 61..121
score: 1.
IPR001854Ribosomal protein L29unknownSSF46561Ribosomal protein L29 (L29p)coord: 57..124
score: 5.49
IPR010729Ribosomal protein L47, mitochondrialPANTHERPTHR21183RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATEDcoord: 29..139
score: 7.3
IPR010729Ribosomal protein L47, mitochondrialPFAMPF06984MRP-L47coord: 35..121
score: 1.3
NoneNo IPR availablePANTHERPTHR21183:SF1839S RIBOSOMAL PROTEIN L47, MITOCHONDRIALcoord: 29..139
score: 7.3

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0009298 GDP-mannose biosynthetic process
biological_process GO:0006412 translation
biological_process GO:0006833 water transport
biological_process GO:0019932 second-messenger-mediated signaling
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0046686 response to cadmium ion
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0019307 mannose biosynthetic process
biological_process GO:0019853 L-ascorbic acid biosynthetic process
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0032543 mitochondrial translation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0006457 protein folding
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016272 prefoldin complex
cellular_component GO:0005829 cytosol
cellular_component GO:0005762 mitochondrial large ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005761 mitochondrial ribosome
cellular_component GO:0005840 ribosome
cellular_component GO:0005730 nucleolus
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0047526 2'-hydroxyisoflavone reductase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004615 phosphomannomutase activity
molecular_function GO:0010283 pinoresinol reductase activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression